View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13826_low_8 (Length: 430)

Name: NF13826_low_8
Description: NF13826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13826_low_8
NF13826_low_8
[»] chr5 (36 HSPs)
chr5 (49-415)||(42511908-42512271)
chr5 (5-121)||(13362770-13362886)
chr5 (5-119)||(23335656-23335770)
chr5 (1-119)||(28070098-28070216)
chr5 (26-119)||(34329129-34329222)
chr5 (18-121)||(25017179-25017282)
chr5 (5-95)||(16668743-16668833)
chr5 (5-92)||(2827016-2827103)
chr5 (6-92)||(18465506-18465592)
chr5 (6-81)||(8948930-8949003)
chr5 (77-114)||(3883929-3883966)
chr5 (77-114)||(14394603-14394640)
chr5 (77-114)||(14940250-14940287)
chr5 (77-114)||(26637731-26637768)
chr5 (56-119)||(13552985-13553049)
chr5 (56-119)||(15416666-15416730)
chr5 (56-95)||(14940356-14940395)
chr5 (57-95)||(4674987-4675025)
chr5 (29-95)||(33868182-33868248)
chr5 (77-114)||(3340592-3340629)
chr5 (77-114)||(11660987-11661024)
chr5 (77-114)||(13363799-13363836)
chr5 (81-114)||(13553122-13553155)
chr5 (77-106)||(15416799-15416828)
chr5 (77-114)||(15559051-15559088)
chr5 (77-106)||(16667668-16667697)
chr5 (77-114)||(22695545-22695582)
chr5 (77-114)||(23155527-23155564)
chr5 (56-93)||(26637837-26637874)
chr5 (77-106)||(30783592-30783621)
chr5 (77-114)||(37456815-37456852)
chr5 (77-114)||(39861581-39861618)
chr5 (77-114)||(39861785-39861822)
chr5 (56-119)||(14394470-14394534)
chr5 (59-95)||(16552642-16552678)
chr5 (56-119)||(30783437-30783501)
[»] chr8 (46 HSPs)
chr8 (1-119)||(32987390-32987508)
chr8 (1-119)||(39021977-39022095)
chr8 (1-119)||(7058116-7058234)
chr8 (1-117)||(4836646-4836762)
chr8 (1-117)||(4842091-4842207)
chr8 (1-96)||(7614093-7614188)
chr8 (1-119)||(15260796-15260915)
chr8 (1-95)||(8550530-8550624)
chr8 (26-119)||(1208711-1208804)
chr8 (6-95)||(15181817-15181906)
chr8 (56-119)||(42433703-42433766)
chr8 (122-213)||(28798055-28798147)
chr8 (77-114)||(1149917-1149954)
chr8 (77-114)||(4835520-4835557)
chr8 (77-114)||(15259857-15259894)
chr8 (77-114)||(34633215-34633252)
chr8 (77-114)||(35301631-35301668)
chr8 (77-114)||(39657710-39657747)
chr8 (54-119)||(40012180-40012245)
chr8 (77-113)||(1209791-1209827)
chr8 (1-41)||(2750105-2750145)
chr8 (56-119)||(10237356-10237420)
chr8 (56-119)||(19784273-19784337)
chr8 (56-119)||(41099184-41099248)
chr8 (56-119)||(43690642-43690706)
chr8 (56-95)||(30413941-30413980)
chr8 (56-95)||(34633321-34633360)
chr8 (61-95)||(9852297-9852331)
chr8 (77-115)||(27506707-27506745)
chr8 (61-95)||(34648133-34648167)
chr8 (59-119)||(1150026-1150087)
chr8 (77-114)||(1672936-1672973)
chr8 (77-114)||(7059170-7059207)
chr8 (81-114)||(10237493-10237526)
chr8 (77-114)||(15227165-15227202)
chr8 (77-114)||(17792897-17792934)
chr8 (77-114)||(23397448-23397485)
chr8 (77-114)||(30414049-30414086)
chr8 (81-114)||(34647173-34647206)
chr8 (77-114)||(35448615-35448652)
chr8 (78-114)||(2751241-2751277)
chr8 (77-105)||(4840974-4841002)
chr8 (56-119)||(15227032-15227096)
chr8 (61-93)||(35302591-35302623)
chr8 (59-95)||(40247288-40247324)
chr8 (56-119)||(41451107-41451171)
[»] chr2 (32 HSPs)
chr2 (1-119)||(18298056-18298174)
chr2 (1-119)||(20709776-20709894)
chr2 (1-119)||(25192894-25193012)
chr2 (26-119)||(14551289-14551381)
chr2 (34-103)||(4579796-4579865)
chr2 (6-75)||(4281738-4281807)
chr2 (6-95)||(25995313-25995402)
chr2 (29-95)||(5098743-5098809)
chr2 (77-114)||(1292073-1292110)
chr2 (77-114)||(7487148-7487185)
chr2 (77-114)||(39355170-39355207)
chr2 (77-114)||(41345089-41345126)
chr2 (56-119)||(7487254-7487318)
chr2 (56-119)||(15016566-15016630)
chr2 (56-119)||(39355037-39355101)
chr2 (77-115)||(19246663-19246701)
chr2 (56-121)||(34464711-34464777)
chr2 (77-114)||(15016460-15016497)
chr2 (77-114)||(18297170-18297207)
chr2 (77-114)||(20661398-20661435)
chr2 (77-114)||(24183602-24183639)
chr2 (77-114)||(25193996-25194033)
chr2 (77-114)||(31783795-31783832)
chr2 (77-114)||(34464846-34464883)
chr2 (77-114)||(34726606-34726643)
chr2 (77-106)||(43823880-43823909)
chr2 (60-92)||(2263603-2263635)
chr2 (56-119)||(8149833-8149897)
chr2 (56-119)||(8154457-8154521)
chr2 (56-119)||(9143587-9143651)
chr2 (59-95)||(39548069-39548105)
chr2 (6-66)||(43822409-43822469)
[»] chr1 (53 HSPs)
chr1 (1-119)||(18056786-18056904)
chr1 (1-119)||(22348041-22348159)
chr1 (5-119)||(45889598-45889712)
chr1 (6-119)||(16115853-16115966)
chr1 (1-119)||(23320030-23320156)
chr1 (6-95)||(37639368-37639457)
chr1 (1-80)||(30802437-30802516)
chr1 (1-83)||(179646-179728)
chr1 (6-95)||(35198131-35198220)
chr1 (1-82)||(8402256-8402337)
chr1 (56-119)||(23921898-23921961)
chr1 (56-95)||(11421621-11421660)
chr1 (59-119)||(4097911-4097972)
chr1 (77-114)||(16976090-16976127)
chr1 (77-114)||(23817445-23817482)
chr1 (77-114)||(24636061-24636098)
chr1 (56-93)||(34369689-34369726)
chr1 (77-114)||(43452677-43452714)
chr1 (77-114)||(48762225-48762262)
chr1 (77-114)||(49936831-49936868)
chr1 (56-119)||(24635928-24635992)
chr1 (56-119)||(25889028-25889092)
chr1 (56-119)||(49936937-49937001)
chr1 (56-119)||(50351805-50351869)
chr1 (56-95)||(18618862-18618901)
chr1 (79-114)||(19897654-19897689)
chr1 (56-95)||(31529665-31529704)
chr1 (56-95)||(33097432-33097471)
chr1 (56-95)||(44260545-44260584)
chr1 (57-95)||(51801734-51801772)
chr1 (77-114)||(1395356-1395393)
chr1 (77-114)||(9041056-9041093)
chr1 (77-114)||(9628604-9628641)
chr1 (77-114)||(10974635-10974672)
chr1 (77-114)||(11422575-11422612)
chr1 (77-114)||(14229174-14229211)
chr1 (77-114)||(17893074-17893111)
chr1 (77-114)||(17893278-17893315)
chr1 (77-114)||(18057814-18057851)
chr1 (77-114)||(21255842-21255879)
chr1 (77-114)||(23920973-23921010)
chr1 (77-114)||(31084407-31084444)
chr1 (77-114)||(33156994-33157031)
chr1 (77-114)||(42134138-42134175)
chr1 (82-114)||(6314256-6314288)
chr1 (56-119)||(19897760-19897824)
chr1 (56-119)||(20434722-20434786)
chr1 (61-93)||(21256777-21256809)
chr1 (59-95)||(23175525-23175561)
chr1 (56-92)||(28375494-28375530)
chr1 (56-119)||(43452544-43452608)
chr1 (77-113)||(45849111-45849147)
chr1 (56-119)||(48762331-48762395)
[»] chr3 (54 HSPs)
chr3 (1-120)||(50754007-50754126)
chr3 (1-119)||(51362383-51362501)
chr3 (1-106)||(52987595-52987700)
chr3 (1-119)||(19385260-19385378)
chr3 (1-117)||(16277359-16277475)
chr3 (1-119)||(8718103-8718221)
chr3 (1-119)||(9069990-9070108)
chr3 (2-119)||(7045246-7045363)
chr3 (1-95)||(39099223-39099317)
chr3 (122-213)||(53517389-53517481)
chr3 (6-93)||(23699356-23699443)
chr3 (6-93)||(23717811-23717898)
chr3 (6-93)||(23736267-23736354)
chr3 (35-83)||(17627210-17627258)
chr3 (77-115)||(50755197-50755235)
chr3 (77-114)||(3475301-3475338)
chr3 (77-114)||(6097578-6097615)
chr3 (77-114)||(8719142-8719179)
chr3 (77-114)||(9071029-9071066)
chr3 (77-114)||(9106402-9106439)
chr3 (77-114)||(9595874-9595911)
chr3 (77-114)||(10986487-10986524)
chr3 (77-114)||(19284806-19284843)
chr3 (77-114)||(30947805-30947842)
chr3 (77-114)||(34562401-34562438)
chr3 (77-114)||(54379297-54379334)
chr3 (77-113)||(2941821-2941857)
chr3 (56-119)||(3475407-3475471)
chr3 (56-119)||(9595980-9596044)
chr3 (56-119)||(19284673-19284737)
chr3 (56-119)||(33414013-33414077)
chr3 (56-119)||(46237758-46237822)
chr3 (56-119)||(47335034-47335098)
chr3 (56-95)||(26662538-26662577)
chr3 (77-115)||(27446218-27446256)
chr3 (77-115)||(47924371-47924409)
chr3 (61-95)||(51846785-51846819)
chr3 (77-114)||(8036802-8036839)
chr3 (77-114)||(16276671-16276708)
chr3 (81-114)||(17620738-17620771)
chr3 (77-114)||(19384383-19384420)
chr3 (77-114)||(26662432-26662469)
chr3 (77-114)||(26960761-26960798)
chr3 (77-114)||(36185910-36185947)
chr3 (77-114)||(46237652-46237689)
chr3 (56-93)||(47728417-47728454)
chr3 (77-114)||(50416482-50416519)
chr3 (77-114)||(50416569-50416606)
chr3 (81-114)||(51361525-51361558)
chr3 (56-93)||(53594997-53595034)
chr3 (59-119)||(54379165-54379226)
chr3 (56-119)||(2941926-2941990)
chr3 (56-119)||(9106269-9106333)
chr3 (178-206)||(33886955-33886983)
[»] chr7 (49 HSPs)
chr7 (1-119)||(30428875-30428993)
chr7 (1-119)||(15974881-15974999)
chr7 (1-119)||(46024029-46024147)
chr7 (26-124)||(48690892-48690990)
chr7 (6-95)||(5757413-5757502)
chr7 (1-93)||(46573445-46573537)
chr7 (28-119)||(12279747-12279838)
chr7 (6-92)||(32090607-32090693)
chr7 (26-119)||(28396724-28396817)
chr7 (1-86)||(33797966-33798051)
chr7 (34-119)||(48305239-48305323)
chr7 (28-119)||(12279643-12279734)
chr7 (26-83)||(48691030-48691087)
chr7 (34-95)||(44141229-44141290)
chr7 (56-119)||(25778839-25778902)
chr7 (77-114)||(11732044-11732081)
chr7 (77-114)||(16933137-16933174)
chr7 (77-114)||(16938520-16938557)
chr7 (77-114)||(30884116-30884153)
chr7 (77-114)||(31660204-31660241)
chr7 (77-114)||(35737083-35737120)
chr7 (77-114)||(41911006-41911043)
chr7 (77-114)||(46358655-46358692)
chr7 (77-114)||(47340282-47340319)
chr7 (77-114)||(48692055-48692092)
chr7 (77-114)||(48830604-48830641)
chr7 (56-119)||(763699-763763)
chr7 (56-119)||(16933244-16933308)
chr7 (56-119)||(16938627-16938691)
chr7 (56-119)||(30884222-30884286)
chr7 (56-119)||(31660071-31660135)
chr7 (56-119)||(41911109-41911173)
chr7 (56-119)||(46358522-46358586)
chr7 (56-95)||(34875516-34875555)
chr7 (77-114)||(763832-763869)
chr7 (77-114)||(15973862-15973899)
chr7 (56-93)||(20000674-20000711)
chr7 (77-114)||(26945719-26945756)
chr7 (52-93)||(27335625-27335665)
chr7 (77-114)||(32685846-32685883)
chr7 (77-114)||(34228607-34228644)
chr7 (77-114)||(38837734-38837771)
chr7 (77-114)||(44426600-44426637)
chr7 (77-114)||(46004540-46004577)
chr7 (77-114)||(46025065-46025102)
chr7 (77-114)||(46572576-46572613)
chr7 (82-114)||(33798743-33798775)
chr7 (59-95)||(35736975-35737011)
chr7 (59-95)||(39007652-39007688)
[»] chr4 (69 HSPs)
chr4 (4-119)||(27764242-27764357)
chr4 (1-119)||(45255977-45256095)
chr4 (1-118)||(22181190-22181307)
chr4 (1-117)||(36621646-36621762)
chr4 (5-119)||(26447361-26447475)
chr4 (1-95)||(4168384-4168478)
chr4 (1-92)||(637883-637974)
chr4 (1-119)||(21097142-21097260)
chr4 (1-119)||(51837036-51837153)
chr4 (1-119)||(38485619-38485733)
chr4 (6-91)||(50563679-50563764)
chr4 (56-119)||(50643745-50643808)
chr4 (56-121)||(29826606-29826671)
chr4 (122-213)||(47803484-47803577)
chr4 (45-92)||(1729604-1729651)
chr4 (34-88)||(6386519-6386573)
chr4 (77-115)||(49492405-49492443)
chr4 (77-114)||(10473653-10473690)
chr4 (77-114)||(11786109-11786146)
chr4 (77-114)||(11798276-11798313)
chr4 (77-114)||(13635619-13635656)
chr4 (77-114)||(15051030-15051067)
chr4 (77-114)||(22180208-22180245)
chr4 (77-114)||(26577263-26577300)
chr4 (77-114)||(30358842-30358879)
chr4 (77-114)||(30597834-30597871)
chr4 (56-124)||(36011840-36011909)
chr4 (77-114)||(45256900-45256937)
chr4 (77-114)||(49425951-49425988)
chr4 (77-114)||(50644675-50644712)
chr4 (77-113)||(638999-639035)
chr4 (56-119)||(1621877-1621941)
chr4 (56-119)||(10472499-10472563)
chr4 (56-119)||(13635725-13635789)
chr4 (56-119)||(15051136-15051200)
chr4 (56-119)||(30597701-30597765)
chr4 (56-119)||(46672441-46672505)
chr4 (56-119)||(49492512-49492576)
chr4 (56-119)||(51921265-51921329)
chr4 (56-95)||(11786001-11786040)
chr4 (56-95)||(11798168-11798207)
chr4 (56-95)||(25574128-25574167)
chr4 (77-115)||(8157294-8157332)
chr4 (61-95)||(30357834-30357868)
chr4 (77-119)||(48077866-48077908)
chr4 (77-114)||(1492674-1492711)
chr4 (77-114)||(2124346-2124383)
chr4 (77-114)||(6841823-6841860)
chr4 (77-114)||(8165764-8165801)
chr4 (77-114)||(17109923-17109960)
chr4 (77-114)||(21995672-21995709)
chr4 (77-114)||(25715645-25715682)
chr4 (77-114)||(30779345-30779382)
chr4 (77-114)||(31763113-31763150)
chr4 (77-114)||(33819693-33819730)
chr4 (77-114)||(36924243-36924280)
chr4 (77-114)||(37059713-37059750)
chr4 (77-106)||(48076922-48076951)
chr4 (59-119)||(49426060-49426121)
chr4 (77-106)||(51921167-51921196)
chr4 (77-114)||(53441455-53441492)
chr4 (77-114)||(53865248-53865285)
chr4 (77-114)||(54895588-54895625)
chr4 (56-92)||(26578189-26578225)
chr4 (77-105)||(35291451-35291479)
chr4 (56-119)||(35291548-35291612)
chr4 (77-113)||(36309419-36309455)
chr4 (9-53)||(48077817-48077861)
chr4 (56-119)||(55765483-55765547)
[»] scaffold0238 (1 HSPs)
scaffold0238 (1-119)||(25177-25295)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-119)||(13615-13733)
[»] chr6 (28 HSPs)
chr6 (1-119)||(33346316-33346434)
chr6 (6-119)||(29157228-29157341)
chr6 (1-91)||(24737636-24737726)
chr6 (6-119)||(15034920-15035038)
chr6 (26-119)||(34399643-34399736)
chr6 (6-92)||(18611218-18611304)
chr6 (1-83)||(877246-877328)
chr6 (46-119)||(35119241-35119310)
chr6 (63-118)||(12394387-12394442)
chr6 (77-114)||(6900938-6900975)
chr6 (77-114)||(7765409-7765446)
chr6 (77-114)||(15493309-15493346)
chr6 (77-114)||(34869957-34869994)
chr6 (56-119)||(1449544-1449608)
chr6 (56-119)||(1536896-1536960)
chr6 (56-119)||(31216664-31216728)
chr6 (56-95)||(6900830-6900869)
chr6 (61-95)||(30908679-30908713)
chr6 (77-114)||(878395-878432)
chr6 (77-114)||(1449677-1449714)
chr6 (77-114)||(7089217-7089254)
chr6 (77-114)||(10588958-10588995)
chr6 (77-114)||(18755665-18755702)
chr6 (77-114)||(19284373-19284410)
chr6 (77-114)||(21384994-21385031)
chr6 (77-114)||(22857490-22857527)
chr6 (77-114)||(30909444-30909481)
chr6 (56-119)||(7089084-7089148)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-119)||(27609-27727)
[»] scaffold0544 (1 HSPs)
scaffold0544 (49-119)||(10668-10738)
[»] scaffold0337 (1 HSPs)
scaffold0337 (29-118)||(7020-7109)
[»] scaffold0189 (1 HSPs)
scaffold0189 (59-124)||(11193-11258)
[»] scaffold0571 (2 HSPs)
scaffold0571 (77-114)||(547-584)
scaffold0571 (56-119)||(676-740)
[»] scaffold0074 (1 HSPs)
scaffold0074 (77-114)||(24409-24446)
[»] scaffold0045 (2 HSPs)
scaffold0045 (56-119)||(33686-33750)
scaffold0045 (77-114)||(33819-33856)
[»] scaffold0338 (1 HSPs)
scaffold0338 (77-115)||(6518-6556)
[»] scaffold0516 (1 HSPs)
scaffold0516 (77-114)||(1253-1290)
[»] scaffold0249 (2 HSPs)
scaffold0249 (77-114)||(23546-23583)
scaffold0249 (77-113)||(23740-23776)
[»] scaffold0129 (1 HSPs)
scaffold0129 (77-114)||(20125-20162)
[»] scaffold0102 (1 HSPs)
scaffold0102 (77-114)||(33618-33655)
[»] scaffold0050 (1 HSPs)
scaffold0050 (77-114)||(20979-21016)
[»] scaffold0581 (1 HSPs)
scaffold0581 (56-119)||(8421-8485)
[»] scaffold0009 (1 HSPs)
scaffold0009 (77-113)||(51908-51944)


Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 49 - 415
Target Start/End: Complemental strand, 42512271 - 42511908
Alignment:
Q  49 acactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttgtccacctgcaacccctggaattttcaatt 148  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |   |||||||||||| ||||||||| ||||||||||||||||||    
T  42512271 acactagatctgatggttgtgaagtgtttatgcacggtggataaggatttctttctaa-ccataacttttgcccacctgcatcccctggaattttcaatt 42512173  T
Q  149 tcaaccaaaaatcttgttttaattggatttgcacaccctcaaatatttattttgcacctcctcacaccgtttcatcaacattcggcactggcccaagccc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42512172 tcaaccaaaaatcttgttttaattggatttgcacaccctcaaatatttattctgcacctcctcacaccgtttcatcaacattcggcactggcccaagccc 42512073  T
Q  249 agtggtttttctcttctgacacgtaatgacatatggcagcactgcactctgcacatcacttgctatacaactttttcggttttcttcagtcaacagttct 348  Q
    | |||||||||||||||||||||||   ||| ||||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||    
T  42512072 attggtttttctcttctgacacgta---acagatggcagcacaacactctgcacatcactcgctatacaactttttcgattttcttcagtcaacagctct 42511976  T
Q  349 agcttctactttcttagagat-atttcacttttaattacttctccccattttattttattatattatt 415  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  42511975 agcttttactttcttagagatgttttcacttttaattacttctccccattttattttgttatattatt 42511908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 13362886 - 13362770
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttat 104  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13362886 tttgatttggtgtagtttgagaagcctatgattattacacgtatacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttat 13362787  T
Q  105 gctccataacttttgtc 121  Q
    || ||||||||||||||    
T  13362786 gcaccataacttttgtc 13362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 23335656 - 23335770
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttat 104  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  23335656 tttgatttggtgtagtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacggtgcatacggatttccttat 23335755  T
Q  105 gctccataacttttg 119  Q
    || ||||||||||||    
T  23335756 gcaccataacttttg 23335770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28070098 - 28070216
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  28070098 gaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatagttgtgaagtgtttatgcacggtgcataaggatttcc 28070197  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  28070198 ttatgcaccataacttttg 28070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 34329222 - 34329129
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  34329222 aagcctatgattattattcgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaagatttccttatgcaccataacttttg 34329129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 25017179 - 25017282
Alignment:
Q  18 agtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttt 117  Q
    ||||||| || ||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25017179 agtttgagaaacctaaaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttt 25017278  T
Q  118 tgtc 121  Q
    ||||    
T  25017279 tgtc 25017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 16668743 - 16668833
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  16668743 tttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataagga 16668833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 2827016 - 2827103
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  2827016 tttgatttggtgtagtttgagaagcctaagataattacacgtgtacactagatctgatggttgtaaagtgtttatgcacggtggataa 2827103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 18465506 - 18465592
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    ||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  18465506 ttgatttggtgtagtttgagaagtctaagattattacacgtgtacactagatctgatggttgtgaagtgtttatgcaggatgcataa 18465592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 8949003 - 8948930
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgc 81  Q
    ||||||||||||||||||| ||||||| ||||||   |||||||||||| ||||||| ||| |||||||| |||||    
T  8949003 ttgatttggtgtagtttgagaagcctaggattat--cacgtgtacactaaatctgatagttttgaagtgtttatgc 8948930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 3883966 - 3883929
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3883966 tatgcacggtgcataaggatttccttatgcaccataac 3883929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 14394603 - 14394640
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  14394603 tatgcacggtgcataaggatttccttatgcaccataac 14394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 14940287 - 14940250
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  14940287 tatgcacggtgcataaggatttccttatgcaccataac 14940250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 26637768 - 26637731
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26637768 tatgcacggtgcataaggatttccttatgcaccataac 26637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 13553049 - 13552985
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  13553049 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 13552985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 15416730 - 15416666
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  15416730 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15416666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 14940356 - 14940395
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  14940356 atctgatggttgtgatgtgtttatgcacggtgcataagga 14940395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 4675025 - 4674987
Alignment:
Q  57 tctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataagga 4674987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 33868248 - 33868182
Alignment:
Q  29 cctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||| |||||||| || |||| | || ||| |||||||||||||||| |||||| ||||||||||||    
T  33868248 cctaggattattacacatgtaaaataaatcagatggttgtgaagtgtttatgcagggtgcataagga 33868182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 3340629 - 3340592
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  3340629 tatgcagggtgcataaggatttccttatgcaccataac 3340592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 11660987 - 11661024
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  11660987 tatgcagggtgcataaggatttccttatgcaccataac 11661024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 13363799 - 13363836
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  13363799 tatgcacggtgcataaggatttccttgtgcaccataac 13363836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 13553122 - 13553155
Alignment:
Q  81 cacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| |||||||    
T  13553122 cacggtgcataaggatttccttatgcaccataac 13553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 15416799 - 15416828
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  15416799 tatgcacggtgcataaggatttccttatgc 15416828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15559088 - 15559051
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  15559088 tatgcatggtgcataaggatttccttatgcaccataac 15559051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 16667697 - 16667668
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  16667697 tatgcacggtgcataaggatttccttatgc 16667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 22695545 - 22695582
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  22695545 tatgcaaggtgcataaggatttccttatgcaccataac 22695582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 23155564 - 23155527
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  23155564 tatgcagggtgcataaggatttccttatgcaccataac 23155527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 26637837 - 26637874
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  26637837 atctgatggttgtgatgtgtttatgcacggtgcataag 26637874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 30783592 - 30783621
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  30783592 tatgcacggtgcataaggatttccttatgc 30783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 37456815 - 37456852
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  37456815 tatgcatggtgcataaggatttccttatgcaccataac 37456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 39861618 - 39861581
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  39861618 tatgcagggtgcataaggatttccttatgccccataac 39861581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 39861785 - 39861822
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  39861785 tatgcagggtgcataaggatttccttatgcaccataac 39861822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 14394534 - 14394470
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| || | |||||||||||||||||| | |  ||||||| ||||||||||||    
T  14394534 atctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttttg 14394470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 16552642 - 16552678
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  16552642 tgatggttgtgaagtgtttatgcatggtgcataagga 16552678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 30783501 - 30783437
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||||||| || |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  30783501 atctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 30783437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32987390 - 32987508
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32987390 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 32987489  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  32987490 ttatgcaccataacttttg 32987508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39022095 - 39021977
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39022095 gaagtttgatttggtgtagtttgagaagcctaggattattacacatgtacactagatctgatgattgtgaagtgtttatgcacggtgcataaggatttcc 39021996  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  39021995 ttatgcaccataacttttg 39021977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7058234 - 7058116
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  7058234 gaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatcggatggttgtgaagtgtttatgcacggtgcataagtatttcc 7058135  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  7058134 ttatgcaccataacttttg 7058116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4836646 - 4836762
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  4836646 gaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttct 4836745  T
Q  101 ttatgctccataacttt 117  Q
    |||||| ||||||||||    
T  4836746 ttatgcaccataacttt 4836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4842091 - 4842207
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  4842091 gaagtttgatttggtgtagtttgaaaagcttaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagcatttct 4842190  T
Q  101 ttatgctccataacttt 117  Q
    |||||| ||||||||||    
T  4842191 ttatgcaccataacttt 4842207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 7614188 - 7614093
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggat 96  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  7614188 gaagtttgatttggtgtagtttgagaagcctatgattattacacgtgtacattagatctgatggttgtgaagtgtttatgcatggtgcataaggat 7614093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15260796 - 15260915
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagg-atttc 99  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |  ||    
T  15260796 gaagtttgatttggtgtagtttgagaagccttggattattaaacgtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggaaaatc 15260895  T
Q  100 cttatgctccataacttttg 119  Q
    ||||||| ||||||||||||    
T  15260896 cttatgcaccataacttttg 15260915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8550624 - 8550530
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8550624 gaagtttgatttggtgtaatttgagaagcttatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 8550530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 1208804 - 1208711
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  1208804 aagcctaggattattacacgtgtacactagatcttatggttgtaaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 1208711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 15181906 - 15181817
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||||| || |||| |||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  15181906 ttgatttggtgtagtttgagaaacctaagattattacacgtgtacactagatctgatgcttgtgaagtgtttatgcagggtgcataagga 15181817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 42433766 - 42433703
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  42433766 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgcaccataacttttg 42433703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 28798055 - 28798147
Alignment:
Q  122 cacctgcaacccctggaattttcaattt-caaccaaaaatcttgttttaattggatttgcacaccctcaaatatttattttgcacctcctcac 213  Q
    |||||||| ||| || |||||| ||||| |||||||| ||||| ||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  28798055 cacctgcatcccttgaaattttaaattttcaaccaaatatcttattttatttgtatctgcacaccctcaaatatttattttgcacctcctcac 28798147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 1149954 - 1149917
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1149954 tatgcacggtgcataaggatttccttatgcaccataac 1149917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 4835557 - 4835520
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4835557 tatgcacggtgcataaggatttccttatgcaccataac 4835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15259894 - 15259857
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15259894 tatgcacggtgcataaggatttccttatgccccataac 15259857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 34633252 - 34633215
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34633252 tatgcacggtgcataaggatttccttatgcaccataac 34633215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 35301668 - 35301631
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  35301668 tatgcacggtgcataaggatttccttatgcaccataac 35301631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 39657747 - 39657710
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  39657747 tatgcacggtgcataaggatttccttatgcaccataac 39657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 40012180 - 40012245
Alignment:
Q  54 agatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||| ||||||||| |||| | |||||| ||||||||||||  ||||||||| ||||||||||||    
T  40012180 agatccgatggttgtaaagtctttatgcatggtgcataaggaaatccttatgcaccataacttttg 40012245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 1209791 - 1209827
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1209791 tatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2750145 - 2750105
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattatta 41  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  2750145 gaagtttgatttggtgtagtttgagaagtctatgattatta 2750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 10237420 - 10237356
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  10237420 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 10237356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 19784337 - 19784273
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  19784337 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 19784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 41099248 - 41099184
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  41099248 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 41099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 43690706 - 43690642
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  43690706 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 43690642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 30413980 - 30413941
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  30413980 atctgatggttgtgatgtgtttatgcacggtgcataagga 30413941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 34633321 - 34633360
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  34633321 atctgatggttgtgatgtgtttatgcacggtgcataagga 34633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 9852331 - 9852297
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataagga 9852297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 27506745 - 27506707
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  27506745 tatgcagggtgcataaggatttccttatgcaccataact 27506707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 34648133 - 34648167
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||||||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataagga 34648167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 1150026 - 1150087
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataa-ggatttccttatgctccataacttttg 119  Q
    |||||||||||| |||| |||||||||||||||| ||| |  ||||||| ||||||||||||    
T  1150026 tgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttttg 1150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 1672936 - 1672973
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  1672936 tatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 7059170 - 7059207
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  7059170 tatgcacggtgcataatgatttccttatgcaccataac 7059207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 10237493 - 10237526
Alignment:
Q  81 cacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| |||||||    
T  10237493 cacggtgcataaggatttccttatgcaccataac 10237526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 15227165 - 15227202
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  15227165 tatgtacggtgcataaggatttccttatgcaccataac 15227202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 17792897 - 17792934
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17792897 tatgcagggtgcataaggatttccttatgcaccataac 17792934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 23397448 - 23397485
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  23397448 tatgcatggtgcataaggatttccttatgcaccataac 23397485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 30414049 - 30414086
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  30414049 tatgcacggtgcataaagatttccttatgcaccataac 30414086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 34647206 - 34647173
Alignment:
Q  81 cacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| |||||||    
T  34647206 cacggtgcataaggatttccttatgcaccataac 34647173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 35448615 - 35448652
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  35448615 tatgcagggtgcataaggatttccttatgcaccataac 35448652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 2751241 - 2751277
Alignment:
Q  78 atgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  2751241 atgcacggtgcataaggattttcttatgcaccataac 2751277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 105
Target Start/End: Complemental strand, 4841002 - 4840974
Alignment:
Q  77 tatgcacggtgcataaggatttccttatg 105  Q
    |||||||||||||||||||||||||||||    
T  4841002 tatgcacggtgcataaggatttccttatg 4840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 15227096 - 15227032
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||| | |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  15227096 atctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15227032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 35302591 - 35302623
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataag 93  Q
    ||||||||||||||| |||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataag 35302623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 40247288 - 40247324
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataagga 40247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 41451171 - 41451107
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||| |||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  41451171 atctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 41451107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 18298056 - 18298174
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18298056 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 18298155  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  18298156 ttatgcaccataacttttg 18298174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 20709894 - 20709776
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  20709894 gaagtttgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttcc 20709795  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  20709794 ttatgcaccataacttttg 20709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25193012 - 25192894
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||| ||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25193012 gaagtttgatttggtgtaatttgagaagcctagaattattacacgtgtacactagatctaatggttgtgaagtgtttatgcacggtgcataaggatttcc 25192913  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  25192912 ttatgcaccataacttttg 25192894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 14551289 - 14551381
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||    
T  14551289 aagcctaggattattacacatgtacactagatctgatggttgtgaagtgtttatgcac-gtgcataagaatttccttatgcaccataacttttg 14551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 4579796 - 4579865
Alignment:
Q  34 gattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcctta 103  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  4579796 gattattacacgtgtacactagatctgatggttgtaaagtgtttatgcatggtgcataaggatttcctta 4579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 4281738 - 4281807
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgt 75  Q
    |||||||| |||||||||| || |||| |||||||| |||||||||||||||||||||||||||||||||    
T  4281738 ttgatttgctgtagtttgagaaacctaggattattacacgtgtacactagatctgatggttgtgaagtgt 4281807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 25995402 - 25995313
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||| |||||  |||||| |||||||| |||||||||||| |||||||||||||||||| | ||||||  |||||||||||    
T  25995402 ttgatttggtgtaatttgagtagcctaggattattacacgtgtacactaaatctgatggttgtgaagtatttatgcagagtgcataagga 25995313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 5098809 - 5098743
Alignment:
Q  29 cctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||| |||||||| ||||||||| || || ||||||||||||||||| |||||| ||||||||||||    
T  5098809 cctaggattattacacgtgtacaataaatttgatggttgtgaagtgtttatgcagggtgcataagga 5098743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 1292110 - 1292073
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1292110 tatgcacggtgcataaggatttccttatgcaccataac 1292073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 7487185 - 7487148
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  7487185 tatgcacggtgcataaggatttccttatgcaccataac 7487148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 39355170 - 39355207
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  39355170 tatgcacggtgcataaggatttccttatgcaccataac 39355207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 41345126 - 41345089
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  41345126 tatgcacggtgcataaggatttccttatgcaccataac 41345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 7487254 - 7487318
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  7487254 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 7487318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 15016566 - 15016630
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  15016566 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15016630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 39355101 - 39355037
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  39355101 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 39355037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 19246701 - 19246663
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  19246701 tatgcagggtgcataaggatttccttatgcaccataact 19246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 34464777 - 34464711
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttgtc 121  Q
    |||||||||||||||  ||| |||||||||||||||||| | |  ||||||| ||||||||||||||    
T  34464777 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttgtc 34464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15016497 - 15016460
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  15016497 tatgcacggtgcataagaatttccttatgcaccataac 15016460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 18297207 - 18297170
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  18297207 tatgcacggtgcataaggatttccctatgcaccataac 18297170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 20661435 - 20661398
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  20661435 tatgcagggtgcataaggatttccttatgcaccataac 20661398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 24183602 - 24183639
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  24183602 tatgcagggtgcataaggatttccttatgcaccataac 24183639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 25193996 - 25194033
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25193996 tatgcacggtgcataaggatttcattatgcaccataac 25194033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 31783832 - 31783795
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  31783832 tatgcagggtgcataaggatttccttatgcaccataac 31783795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 34464846 - 34464883
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||  |||||||    
T  34464846 tatgcacggtgcataaggatttccttatggaccataac 34464883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 34726643 - 34726606
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  34726643 tatgcagggtgcataaggatttccttatgcaccataac 34726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Original strand, 43823880 - 43823909
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  43823880 tatgcacggtgcataaggatttccttatgc 43823909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 2263635 - 2263603
Alignment:
Q  60 gatggttgtgaagtgtatatgcacggtgcataa 92  Q
    |||||||||||||||| ||||||||||||||||    
T  2263635 gatggttgtgaagtgtttatgcacggtgcataa 2263603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 8149897 - 8149833
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||| ||||||||| | |  ||||||| ||||||||||||    
T  8149897 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttg 8149833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 8154521 - 8154457
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||| ||||||||| | |  ||||||| ||||||||||||    
T  8154521 atctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttg 8154457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 9143651 - 9143587
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||| |||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  9143651 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 9143587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 39548105 - 39548069
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  39548105 tgatggttgtgaagtgtttatgcagggtgcataagga 39548069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43822469 - 43822409
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggtt 66  Q
    ||||||| ||||| ||| | || |||| |||||| | ||||||||||||||||||||||||    
T  43822469 ttgattttgtgtaatttaagaaacctaggattatcacacgtgtacactagatctgatggtt 43822409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 18056904 - 18056786
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18056904 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 18056805  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  18056804 ttatgcaccataacttttg 18056786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 22348159 - 22348041
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  22348159 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcgcggtgcataaggatttcc 22348060  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  22348059 ttatgcaccataacttttg 22348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 45889712 - 45889598
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttat 104  Q
    |||||||||||||||||||| ||||||| |||||||| || |||| |||||||||||||||||| || ||| ||||||||||| ||||| ||||||||||    
T  45889712 tttgatttggtgtagtttgagaagcctaagattattacacatgtatactagatctgatggttgtaaaatgtttatgcacggtggataagaatttccttat 45889613  T
Q  105 gctccataacttttg 119  Q
    || ||||| ||||||    
T  45889612 gcaccataccttttg 45889598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 16115966 - 16115853
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatg 105  Q
    ||||||||||||||||| | ||| ||  |||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  16115966 ttgatttggtgtagtttaagaagtcttggattattacacgtgtacattagatttgatggttgtgaagtgtttatgcacggtgcataaggatttccttatg 16115867  T
Q  106 ctccataacttttg 119  Q
    |   ||||||||||    
T  16115866 catgataacttttg 16115853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 23320030 - 23320156
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacg--------gtgcataa 92  Q
    |||||||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||||| |        | ||||||    
T  23320030 gaagtttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcatgatacctaagagcataa 23320129  T
Q  93 ggatttccttatgctccataacttttg 119  Q
    |||||||||||||| ||||||||||||    
T  23320130 ggatttccttatgcaccataacttttg 23320156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 37639457 - 37639368
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  37639457 ttgatttggtgtagtttgagaagtctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcataagga 37639368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30802516 - 30802437
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatg 80  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  30802516 gaagtttgatttggtgtagtttgagaagcctaagattattacacgtgtacactagatctgatggttgtgaaatgtttatg 30802437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 179728 - 179646
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcac 83  Q
    |||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  179728 gaagtttgatttggtgtagtttgagaagcttgggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcac 179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35198131 - 35198220
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||| ||||||||||| ||| ||| |||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  35198131 ttgattttgtgtagtttgaaaagtctaggattattacacgtgtacactagatctgatggctgtgaagtgtttatgcagggtgcataagga 35198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8402256 - 8402337
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgca 82  Q
    ||||||||||||||| |||||||| || |||| |||||||| | |||||||||||||||||||||| |||||||| ||||||    
T  8402256 gaagtttgatttggtttagtttgagaaacctaggattattacatgtgtacactagatctgatggttatgaagtgtttatgca 8402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 23921898 - 23921961
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||| |||||||  |||||||| ||||||||||||||||||||| | ||||||||||    
T  23921898 atctgatggttatgaagtgcttatgcacgatgcataaggatttccttatgcacaataacttttg 23921961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 11421660 - 11421621
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  11421660 atctgatggttgtgaagtgtttatgcacggtgcataagga 11421621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 4097911 - 4097972
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  4097911 tgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 4097972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 16976090 - 16976127
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16976090 tatgcacggtgcataaggatttccttatgcaccataac 16976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 23817445 - 23817482
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  23817445 tatgcacggtgcataaggatttccttatgcaccataac 23817482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 24636061 - 24636098
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24636061 tatgcacggtgcataaggatttccttatgcaccataac 24636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 34369726 - 34369689
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||||||||||||||| |||||||||||||||||    
T  34369726 atctgatggttgtgaagtgtttatgcacggtgcataag 34369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 43452677 - 43452714
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  43452677 tatgcacggtgcataaggatttccttatgcaccataac 43452714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 48762262 - 48762225
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48762262 tatgcacggtgcataaggatttccttatgcaccataac 48762225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 49936868 - 49936831
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  49936868 tatgcacggtgcataaggatttccttatgcaccataac 49936831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 24635992 - 24635928
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  24635992 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 24635928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 25889028 - 25889092
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  25889028 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 25889092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 49936937 - 49937001
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  49936937 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 49937001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 50351869 - 50351805
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  50351869 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 50351805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 18618901 - 18618862
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  18618901 atctgatggttgtgatgtgtttatgcacggtgcataagga 18618862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 19897689 - 19897654
Alignment:
Q  79 tgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||| |||||||    
T  19897689 tgcacggtgcataaggatttccttatgcaccataac 19897654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 31529665 - 31529704
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  31529665 atctgatggttgtgaagtgtttatgcatggtgcataagga 31529704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 33097471 - 33097432
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  33097471 atctgatggttgtgaagtgtttatgcagggtgcataagga 33097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 44260584 - 44260545
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  44260584 atctgatggttgtgaagtgtttatgcagggtgcataagga 44260545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 51801734 - 51801772
Alignment:
Q  57 tctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataagga 51801772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 1395356 - 1395393
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  1395356 tatgcatggtgcataaggatttccttatgcaccataac 1395393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 9041056 - 9041093
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  9041056 tatgcagggtgcataaggatttccttatgcaccataac 9041093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 9628604 - 9628641
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  9628604 tatgcagggtgcataaggatttccttatgcaccataac 9628641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 10974672 - 10974635
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  10974672 tatgcagggtgcataaggatttccttatgcaccataac 10974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 11422575 - 11422612
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  11422575 tatgcacgatgcataaggatttccttatgcaccataac 11422612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 14229211 - 14229174
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  14229211 tatgcagggtgcataaggatttccttatgcaccataac 14229174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 17893111 - 17893074
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17893111 tatgcagggtgcataaggatttccttatgcaccataac 17893074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 17893278 - 17893315
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17893278 tatgcagggtgcataaggatttccttatgcaccataac 17893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 18057814 - 18057851
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||| | |||||||    
T  18057814 tatgcacggtgcataaggatttccttatacaccataac 18057851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 21255879 - 21255842
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  21255879 tatgcacggtgtataaggatttccttatgcaccataac 21255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 23921010 - 23920973
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  23921010 tatgcacgatgcataaggatttccttatgcaccataac 23920973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 31084407 - 31084444
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  31084407 tatgcacggtacataaggatttccttatgcaccataac 31084444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 33157031 - 33156994
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  33157031 tatgcagggtgcataaggatttccttatgcaccataac 33156994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 42134138 - 42134175
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  42134138 tatgcagggtgcataaggatttccttatgcaccataac 42134175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 6314256 - 6314288
Alignment:
Q  82 acggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||||||||| |||||||    
T  6314256 acggtgcataaggatttccttatgcaccataac 6314288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 19897760 - 19897824
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||||||||||  ||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  19897760 atctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 19897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 20434722 - 20434786
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||| |||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  20434722 atctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 20434786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 93
Target Start/End: Original strand, 21256777 - 21256809
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataag 93  Q
    ||||||||||||||| |||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataag 21256809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 23175525 - 23175561
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  23175525 tgatggttgtgaagtgtttatgcacggcgcataagga 23175561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 28375530 - 28375494
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28375530 atctgatggttgtgatgtgtttatgcacggtgcataa 28375494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 43452608 - 43452544
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||| ||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  43452608 atctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 43452544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 45849147 - 45849111
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  45849147 tatgcagggtgcataaggatttccttatgcaccataa 45849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 48762331 - 48762395
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||| |||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  48762331 atctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 48762395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 50754126 - 50754007
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50754126 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 50754027  T
Q  101 ttatgctccataacttttgt 120  Q
    |||||  |||||||||||||    
T  50754026 ttatgtaccataacttttgt 50754007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51362383 - 51362501
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  51362383 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 51362482  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  51362483 ttatgcaccataacttttg 51362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52987595 - 52987700
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52987595 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 52987694  T
Q  101 ttatgc 106  Q
    ||||||    
T  52987695 ttatgc 52987700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 19385260 - 19385378
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    ||||||||||||| |||||||||| |||||||  ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  19385260 gaagtttgatttgatgtagtttgagaagcctagaattattacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 19385359  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  19385360 ttatgcaccataacttttg 19385378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16277359 - 16277475
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||| || |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  16277359 gaagtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatatgatggttgtgaagtgtttatgcacggtgcataaagatttcc 16277458  T
Q  101 ttatgctccataacttt 117  Q
    |||||| ||||||||||    
T  16277459 ttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 8718221 - 8718103
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| || |||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  8718221 gaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggatttcc 8718122  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  8718121 ttatgcaccataacttttg 8718103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9070108 - 9069990
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||| | ||||||| |||||||| || |||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  9070108 gaagtttgatttggtgtagtttaagaagcctaggattattacacatgtacactagatctgatggttgtgaagtatttatgtacggtgcataaggatttcc 9070009  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  9070008 ttatgcaccataacttttg 9069990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 7045246 - 7045363
Alignment:
Q  2 aagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcct 101  Q
    |||||||||||| |||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  7045246 aagtttgatttgatgtagtctgagaagcctacgattattacacgtgtacactagatctgatggttgtgaagtgtttatacacggtgcataagaatttcct 7045345  T
Q  102 tatgctccataacttttg 119  Q
    ||||| ||||||||||||    
T  7045346 tatgcaccataacttttg 7045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 39099317 - 39099223
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  39099317 gaagtttgatttagtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatatttatgcacggtgcataagga 39099223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 53517389 - 53517481
Alignment:
Q  122 cacctgcaacccctggaattttcaattt-caaccaaaaatcttgttttaattggatttgcacaccctcaaatatttattttgcacctcctcac 213  Q
    |||||||| |||||| |||||| ||||| |||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||| |||||    
T  53517389 cacctgcatcccctgaaattttaaattttcaaccaaatatcttgttttatttgtatctgcacaccctcaaatatttattttgcaccttctcac 53517481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 23699443 - 23699356
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||| |||||||||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| |||| |||||    
T  23699443 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataag 23699356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 23717898 - 23717811
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||| |||||||||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| |||| |||||    
T  23717898 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataag 23717811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 23736354 - 23736267
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||| |||||||||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |||||| |||| |||||    
T  23736354 ttgatttgatgtagtttgaaaagcctaggattattacacgtgtacattagatatgatggttgtgaagtgtttatgcagggtgtataag 23736267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 17627210 - 17627258
Alignment:
Q  35 attattatacgtgtacactagatctgatggttgtgaagtgtatatgcac 83  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17627210 attattacacgtgtacactagatctgatggttgtgaagtgtttatgcac 17627258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 50755197 - 50755235
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  50755197 tatgcacggtgcataaggatttccttatgcaccataact 50755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 3475338 - 3475301
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3475338 tatgcacggtgcataaggatttccttatgcaccataac 3475301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 6097615 - 6097578
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  6097615 tatgcacggtgcataaggatttccttatgcaccataac 6097578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 8719142 - 8719179
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  8719142 tatgcacggtgcataaggatttccttatgcaccataac 8719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 9071029 - 9071066
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9071029 tatgcacggtgcataaggatttccttatgcaccataac 9071066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 9106402 - 9106439
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9106402 tatgcacggtgcataaggatttccttatgcaccataac 9106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 9595911 - 9595874
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9595911 tatgcacggtgcataaggatttccttatgcaccataac 9595874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 10986487 - 10986524
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10986487 tatgcacggtgcataaggatttccttatgcaccataac 10986524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 19284806 - 19284843
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  19284806 tatgcacggtgcataaggatttccttatgcaccataac 19284843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 30947842 - 30947805
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30947842 tatgcacggtgcataaggatttccttatgcaccataac 30947805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 34562438 - 34562401
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34562438 tatgcacggtgcataaggatttccttatgcaccataac 34562401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 54379297 - 54379334
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  54379297 tatgcacggtgcataaggatttccttatgcaccataac 54379334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 2941857 - 2941821
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||||||||||||||||||||||||||| ||||||    
T  2941857 tatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 3475407 - 3475471
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  3475407 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 3475471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 9595980 - 9596044
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  9595980 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttg 9596044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 19284737 - 19284673
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  19284737 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 19284673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 33414013 - 33414077
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  33414013 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 33414077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 46237758 - 46237822
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  46237758 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 47335098 - 47335034
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  47335098 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 47335034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 26662538 - 26662577
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  26662538 atctgatggttgtgatgtgtttatgcacggtgcataagga 26662577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 27446218 - 27446256
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  27446218 tatgcaaggtgcataaggatttccttatgcaccataact 27446256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 47924371 - 47924409
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  47924371 tatgcagggtgcataaggatttccttatgcaccataact 47924409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 51846785 - 51846819
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataagga 51846819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 8036839 - 8036802
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  8036839 tatgcagggtgcataaggatttccttatgcaccataac 8036802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 16276708 - 16276671
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  16276708 tatgcacggtgcataaggatttctttatgcaccataac 16276671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 17620771 - 17620738
Alignment:
Q  81 cacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| |||||||    
T  17620771 cacggtgcataaggatttccttatgcaccataac 17620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 19384420 - 19384383
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  19384420 tatgcacggtgcataagaatttccttatgcaccataac 19384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 26662469 - 26662432
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  26662469 tatgcacagtgcataaggatttccttatgcaccataac 26662432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 26960761 - 26960798
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  26960761 tatgcacggtgcataaagatttccttatgcaccataac 26960798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 36185910 - 36185947
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  36185910 tatgcagggtgcataaggatttccttatgcaccataac 36185947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 46237689 - 46237652
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  46237689 tatgcacggtgtataaggatttccttatgcaccataac 46237652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 47728454 - 47728417
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  47728454 atctgatggttgtgaagtgtttatgcagggtgcataag 47728417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 50416519 - 50416482
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  50416519 tatgcagggtgcataaggatttccttatgcaccataac 50416482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 50416569 - 50416606
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  50416569 tatgcagggtgcataaggatttccttatgcaccataac 50416606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 51361558 - 51361525
Alignment:
Q  81 cacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||| |||||||    
T  51361558 cacggtgcataaggatttccttatgcaccataac 51361525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Complemental strand, 53595034 - 53594997
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  53595034 atctgatggttgtgaagtgtttatgcagggtgcataag 53594997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 54379226 - 54379165
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  54379226 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 54379165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 2941926 - 2941990
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||| ||||||| | |  ||||||| ||||||||||||    
T  2941926 atctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttttg 2941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 9106333 - 9106269
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||| | |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  9106333 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 9106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 33886983 - 33886955
Alignment:
Q  178 tgcacaccctcaaatatttattttgcacc 206  Q
    |||||||||||||||||||||||||||||    
T  33886983 tgcacaccctcaaatatttattttgcacc 33886955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30428993 - 30428875
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30428993 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaaatgtttatgcacggtgcataaggatttcc 30428894  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  30428893 ttatgcaccataacttttg 30428875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15974881 - 15974999
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||| ||||||||||||| |||||||| | |||||||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  15974881 gaagtttgatttggtgtactttgataagcctaagattattacatgtgtacactaaatatgatggttgtgaagtgtttatgcacggtgcataaggatttcc 15974980  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  15974981 ttatgcaccataacttttg 15974999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 46024147 - 46024029
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    ||||||||||||  |||||||||| ||| ||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |    
T  46024147 gaagtttgatttaatgtagtttgagaagtctaggattattacacgtgtacactatatctgatggttgtgaagtgtttatgcacggtgcataaggattttc 46024048  T
Q  101 ttatgctccataacttttg 119  Q
    || ||| ||||||||||||    
T  46024047 ttgtgcaccataacttttg 46024029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 48690990 - 48690892
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttgtccac 124  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  48690990 aagcctatgattattacacgtgtacactagatttgatggttgtgaactgtttatgcacggtgcataaggatttctttatgcaccataacttttgcccac 48690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 5757502 - 5757413
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5757502 ttgatttggtgtagtttgagaagtctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 5757413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 46573445 - 46573537
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  46573445 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatatacggtgcataag 46573537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 12279838 - 12279747
Alignment:
Q  28 gcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||| ||| |||| |||| |||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||    
T  12279838 gcctaggatcattacacgtatacactagatctaatggttgtgaagtctttatgcacggtgcataaagatttccttatgcaccataacttttg 12279747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 32090693 - 32090607
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||| |||| ||| |||||| |||||||||    
T  32090693 ttgatttggtgtagtttgagaagcctatgattattacacgtgtatactagatttgatggttctgaattgtttatgcagggtgcataa 32090607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 28396817 - 28396724
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||| ||||||||  | |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||  | |||||||||    
T  28396817 aagcctaggattattactcttgtacactagatctgatgattgtgaaatgtttatgcacggtgcataaggatttccttatgcatcgtaacttttg 28396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 33798051 - 33797966
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggt 86  Q
    ||||||||||||| |||||||||| ||| ||| |||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||    
T  33798051 gaagtttgatttgatgtagtttgagaagtctaggattattacacgtgtatactagatctgatggttgtgaaatgtttatgcacggt 33797966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 48305323 - 48305239
Alignment:
Q  34 gattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||||  ||||||||| ||||||||||||    
T  48305323 gattattatacgtgtacactagatccgatgtttgtaaagtgtttatgcacggtgcataagga-atccttatgcaccataacttttg 48305239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 12279734 - 12279643
Alignment:
Q  28 gcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||| ||| |||| ||||||||||| ||||| ||||||||||||| | ||| |||||||||||| ||||||||||||  ||||||||||||    
T  12279734 gcctaggatcattacacgtgtacactggatctaatggttgtgaagtctttatacacggtgcataatgatttccttatgtaccataacttttg 12279643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 48691087 - 48691030
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcac 83  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48691087 aagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtctatgcac 48691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 44141229 - 44141290
Alignment:
Q  34 gattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||| |||||||||||| ||| |||||||||||||||| |||||| ||||||||||||    
T  44141229 gattattacacgtgtacactaaatcagatggttgtgaagtgtttatgcagggtgcataagga 44141290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 25778902 - 25778839
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    |||||||||||||||||||  ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  25778902 atctgatggttgtgaagtgcttatgcacagtgcataagaattttcttatgcaccataacttttg 25778839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 11732081 - 11732044
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11732081 tatgcacggtgcataaggatttccttatgcaccataac 11732044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 16933174 - 16933137
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16933174 tatgcacggtgcataaggatttccttatgcaccataac 16933137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 16938557 - 16938520
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  16938557 tatgcacggtgcataaggatttccttatgcaccataac 16938520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 30884153 - 30884116
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30884153 tatgcacggtgcataaggatttccttatgcaccataac 30884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 31660204 - 31660241
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31660204 tatgcacggtgcataaggatttccttatgcaccataac 31660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 35737083 - 35737120
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  35737083 tatgcacggtgcataaggatttccttatgcaccataac 35737120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 41911043 - 41911006
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  41911043 tatgcacggtgcataaggatttccttatgcaccataac 41911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 46358655 - 46358692
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  46358655 tatgcacggtgcataaggatttccttatgcaccataac 46358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 47340282 - 47340319
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  47340282 tatgcacggtgcataaggatttccttatgcaccataac 47340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 48692055 - 48692092
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48692055 tatgcacggtgcataaggatttccttatgcaccataac 48692092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 48830604 - 48830641
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  48830604 tatgcacggtgcataaggatttccttatgcaccataac 48830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 763763 - 763699
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  763763 atctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 763699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 16933244 - 16933308
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  16933244 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 16933308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 16938627 - 16938691
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  16938627 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 16938691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 30884222 - 30884286
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  30884222 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 30884286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 31660135 - 31660071
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  31660135 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 31660071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 41911109 - 41911173
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  41911109 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 41911173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 46358586 - 46358522
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  46358586 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46358522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 34875555 - 34875516
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  34875555 atctgatggttgtgaagtgtttatgcagggtgcataagga 34875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 763832 - 763869
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  763832 tatgcacagtgcataaggatttccttatgcaccataac 763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15973899 - 15973862
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  15973899 tatgcatggtgcataaggatttccttatgcaccataac 15973862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 20000674 - 20000711
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  20000674 atctgatggttgtgatgtgtttatgcacggtgcataag 20000711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 26945719 - 26945756
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  26945719 tatgcagggtgcataaggatttccttatgcaccataac 26945756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 27335625 - 27335665
Alignment:
Q  52 ctagatctgatggttgtgaagtgtatatgcacggtgcataag 93  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  27335625 ctagatctgatggttgtgaagtgtttatgca-ggtgcataag 27335665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 32685883 - 32685846
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  32685883 tatgcacggtgtataaggatttccttatgcaccataac 32685846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 34228644 - 34228607
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  34228644 tatgcacggtgcataaggattttcttatgcaccataac 34228607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 38837734 - 38837771
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  38837734 tatgcaaggtgcataaggatttccttatgcaccataac 38837771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 44426637 - 44426600
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  44426637 tatgcagggtgcataaggatttccttatgcaccataac 44426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 46004540 - 46004577
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  46004540 tatgcagggtgcataaggatttccttatgcaccataac 46004577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 46025065 - 46025102
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  46025065 tatgcacggtgcatagggatttccttatgcaccataac 46025102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 46572613 - 46572576
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  46572613 tatgcatggtgcataaggatttccttatgcaccataac 46572576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 33798743 - 33798775
Alignment:
Q  82 acggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||||||||| |||||||    
T  33798743 acggtgcataaggatttccttatgcaccataac 33798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 35737011 - 35736975
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||| |||| |||||||||||||||||||    
T  35737011 tgatggttgtgatgtgtttatgcacggtgcataagga 35736975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 39007652 - 39007688
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  39007652 tgatggttgtgaagtgtttatgcagggtgcataagga 39007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 27764357 - 27764242
Alignment:
Q  4 gtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcctta 103  Q
    ||||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  27764357 gtttgatttggtgtagtttgagaagcgtaggattattacacgtgtacactagatctgatggttgcgaagtgtttatgcacggtgcataaggatttcctta 27764258  T
Q  104 tgctccataacttttg 119  Q
    ||| ||||||||||||    
T  27764257 tgcaccataacttttg 27764242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45256095 - 45255977
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    ||||||||||||| |||||||||| ||||||| |||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  45256095 gaagtttgatttgatgtagtttgaaaagcctaggattattacacgtgtacactatatctgatagttgtgaagtgtttatgcacggtgcataaggatttcc 45255996  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  45255995 ttatgcaccataacttttg 45255977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22181190 - 22181307
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| || |||| |||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  22181190 gaagtttgatttggtgtagtttgagaaacctaggattattacacgtgtacactaaatctgatggttgtgaagtttttatgcacggtgcataaggatttcc 22181289  T
Q  101 ttatgctccataactttt 118  Q
    |||||| |||||||||||    
T  22181290 ttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36621646 - 36621762
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||| | |||| || |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36621646 gaagtttgatttggtgtagtttaagaagcataggattattacacgtgtacattagatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 36621745  T
Q  101 ttatgctccataacttt 117  Q
    |||||| ||||||||||    
T  36621746 ttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 26447361 - 26447475
Alignment:
Q  5 tttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttat 104  Q
    |||||||||||||| ||||  |||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26447361 tttgatttggtgtaatttgtgaagcctagaattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataaggatttccttat 26447460  T
Q  105 gctccataacttttg 119  Q
    || |||| |||||||    
T  26447461 gcaccattacttttg 26447475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4168478 - 4168384
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||||||| || |||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4168478 gaagtttgatttggtgtagtttgagaaacctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 637974 - 637883
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    |||||||||||||||||||||||| |||||||  ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  637974 gaagtttgatttggtgtagtttgagaagcctaaaattattacacatgtacactagatctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21097260 - 21097142
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||| ||| |||||| ||  ||||||| ||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  21097260 gaagtttgatttggtgtaatttaataagcttagaattattacacgtgtaaactagatctaatggttgtgaagtgtttatacacggtgcataaggatttcc 21097161  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| |  |||||||||    
T  21097160 ttatgcacggtaacttttg 21097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51837036 - 51837153
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||||| || |||||||||||||||||| | ||||| || || |||||||||| |    
T  51837036 gaagtttgatttggtgtagtttgagaagcctaggattattacacgtgtacattaaatctgatggttgtgaagtatttatgctcgatg-ataaggattttc 51837134  T
Q  101 ttatgctccataacttttg 119  Q
    |||| | ||||||||||||    
T  51837135 ttatacaccataacttttg 51837153  T

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Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 38485619 - 38485733
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    ||||||||||||  |||| ||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||||    ||||    
T  38485619 gaagtttgatttaatgtattttgagaagcctaggattattacacgtgtacattagatctgatggttgtgaagcgtttatgcacggtgcataa----ttcc 38485714  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  38485715 ttatgcaccataacttttg 38485733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 50563679 - 50563764
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcata 91  Q
    ||||||||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  50563679 ttgatttggtgtagtttgagaaacctataattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagggtgcata 50563764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 50643808 - 50643745
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  50643808 atctgatggttatgaagtgtttatgcacggtgcataaggatttccttatgcaccataacttttg 50643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 29826606 - 29826671
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttgtc 121  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||    
T  29826606 atctgatggttgtgaagtgcttatgcacggtgcataaggatttccttatgtaccataacttttgtc 29826671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 47803577 - 47803484
Alignment:
Q  122 cacctgcaacccctggaattttcaattt-caaccaaaaatctt-gttttaattggatttgcacaccctcaaatatttattttgcacctcctcac 213  Q
    |||||||| ||| || |||||| ||||| |||||||| ||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  47803577 cacctgcatcccttgaaattttaaattttcaaccaaatatctttgttttatttgtatctgcacaccctcaaatatttattttgcacctcctcac 47803484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 1729604 - 1729651
Alignment:
Q  45 gtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1729604 gtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataa 1729651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 6386519 - 6386573
Alignment:
Q  34 gattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgc 88  Q
    |||||||| |||||| ||||| |||||||||||||||||||| |||||| |||||    
T  6386519 gattattacacgtgtccactaaatctgatggttgtgaagtgtttatgcagggtgc 6386573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 49492443 - 49492405
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  49492443 tatgcacggtgcataaggatttccttatgcaccataact 49492405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 10473653 - 10473690
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10473653 tatgcacggtgcataaggatttccttatgcaccataac 10473690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 11786109 - 11786146
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11786109 tatgcacggtgcataaggatttccttatgcaccataac 11786146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 11798276 - 11798313
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  11798276 tatgcacggtgcataaggatttccttatgcaccataac 11798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 13635656 - 13635619
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13635656 tatgcacggtgcataaggatttccttatgcaccataac 13635619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15051067 - 15051030
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15051067 tatgcacggtgcataaggatttccttatgcaccataac 15051030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 22180245 - 22180208
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  22180245 tatgcacggtgcataaggatttccttatgcaccataac 22180208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 26577300 - 26577263
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  26577300 tatgcacggtgcataaggatttccttatgcaccataac 26577263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 30358842 - 30358879
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30358842 tatgcacggtgcataaggatttccttatgcaccataac 30358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 30597834 - 30597871
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30597834 tatgcacggtgcataaggatttccttatgcaccataac 30597871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 36011909 - 36011840
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttgtccac 124  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| |||||||||||| ||||    
T  36011909 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcccac 36011840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 45256900 - 45256937
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  45256900 tatgcacggtgcataaggatttccttatgcaccataac 45256937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 49425988 - 49425951
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  49425988 tatgcacggtgcataaggatttccttatgcaccataac 49425951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 50644675 - 50644712
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  50644675 tatgcacggtgcataaggatttccttatgcaccataac 50644712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 638999 - 639035
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||||||||||||||||||||||||||| ||||||    
T  638999 tatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 1621941 - 1621877
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  1621941 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 1621877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 10472563 - 10472499
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||||||||||| ||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  10472563 atctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 10472499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 13635725 - 13635789
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  13635725 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 13635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 15051136 - 15051200
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  15051136 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 15051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 30597765 - 30597701
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  30597765 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 30597701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 46672505 - 46672441
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  46672505 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 46672441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 49492512 - 49492576
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  49492512 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 49492576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 51921265 - 51921329
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  51921265 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 51921329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 11786040 - 11786001
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  11786040 atctgatggttgtgatgtgtttatgcacggtgcataagga 11786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 11798207 - 11798168
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  11798207 atctgatggttgtgatgtgtttatgcacggtgcataagga 11798168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 25574128 - 25574167
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  25574128 atctgatggttgtgaagtgtttatgcagggtgcataagga 25574167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 8157294 - 8157332
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  8157294 tatgcagggtgcataaggatttccttatgcaccataact 8157332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 30357868 - 30357834
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||||||||||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataagga 30357834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 48077866 - 48077908
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||||||||||||||||||||||   ||||||||||    
T  48077866 tatgcacggtgcataaggatttccttatgcatgataacttttg 48077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 1492711 - 1492674
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  1492711 tatgcagggtgcataaggatttccttatgcaccataac 1492674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 2124383 - 2124346
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  2124383 tatgcagggtgcataaggatttccttatgcaccataac 2124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 6841860 - 6841823
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  6841860 tatgcagggtgcataaggatttccttatgcaccataac 6841823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 8165801 - 8165764
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  8165801 tatgcagggtgcataaggatttccttatgcaccataac 8165764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 17109923 - 17109960
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17109923 tatgcagggtgcataaggatttccttatgcaccataac 17109960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 21995709 - 21995672
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  21995709 tatgcagggtgcataaggatttccttatgcaccataac 21995672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 25715682 - 25715645
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  25715682 tatgcagggtgcataaggatttccttatgcaccataac 25715645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 30779382 - 30779345
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  30779382 tatgcaaggtgcataaggatttccttatgcaccataac 30779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 31763113 - 31763150
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  31763113 tatgcagggtgcataaggatttccttatgcaccataac 31763150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 33819730 - 33819693
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  33819730 tatgcagggtgcataaggatttccttatgcaccataac 33819693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 36924280 - 36924243
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  36924280 tatgcagggtgcataaggatttccttatgcaccataac 36924243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 37059750 - 37059713
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  37059750 tatgcaaggtgcataaggatttccttatgcaccataac 37059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 48076951 - 48076922
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  48076951 tatgcacggtgcataaggatttccttatgc 48076922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 49426060 - 49426121
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  49426060 tgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 49426121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 51921196 - 51921167
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgc 106  Q
    ||||||||||||||||||||||||||||||    
T  51921196 tatgcacggtgcataaggatttccttatgc 51921167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 53441455 - 53441492
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  53441455 tatgcccggtgcataaggatttccttatgcaccataac 53441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 53865248 - 53865285
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  53865248 tatgcagggtgcataaggatttccttatgcaccataac 53865285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 54895588 - 54895625
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  54895588 tatgcagggtgcataaggatttccttatgcaccataac 54895625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 26578189 - 26578225
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    |||||||||||||||||||| |||||||| |||||||    
T  26578189 atctgatggttgtgaagtgtttatgcacgatgcataa 26578225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 105
Target Start/End: Complemental strand, 35291479 - 35291451
Alignment:
Q  77 tatgcacggtgcataaggatttccttatg 105  Q
    |||||||||||||||||||||||||||||    
T  35291479 tatgcacggtgcataaggatttccttatg 35291451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 35291548 - 35291612
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||| |||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  35291548 atcttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 35291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 36309455 - 36309419
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  36309455 tatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 48077817 - 48077861
Alignment:
Q  9 atttggtgtagtttgataagcctatgattattatacgtgtacact 53  Q
    |||||||||||||||| ||||||| |||||||| || ||||||||    
T  48077817 atttggtgtagtttgagaagcctaggattattacacatgtacact 48077861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 55765547 - 55765483
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||| | |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  55765547 atctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 55765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25177 - 25295
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| || |||| |||||| | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  25177 gaagtttgatttggtgtagtttgagaaacctaagattatgacacgtgtacactaaatctgatggttgtgaagtgtttatgcacggtgcataaggatttcc 25276  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  25277 ttatgcaccataacttttg 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13733 - 13615
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13733 gaagtttgatttggtgtagtttgagaagcgtaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtggataaggatttcc 13634  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  13633 ttatgcaccataacttttg 13615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33346316 - 33346434
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||  ||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  33346316 gaagtttgatttgacgtagtttgagaagcctataattattacacgtgtacactagatttgatggttgtgaagtgtttatgcacggtgcataaggatttcc 33346415  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  33346416 ttatgcaccataacttttg 33346434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 29157341 - 29157228
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatg 105  Q
    ||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||    
T  29157341 ttgatttggtgtagtttgagaagcctagtattattacacgtgtacactagatctgatggttgtaaagtgtttatgcacggtgcataaggatttccttgtg 29157242  T
Q  106 ctccataacttttg 119  Q
    |   ||||||||||    
T  29157241 catgataacttttg 29157228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24737636 - 24737726
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcata 91  Q
    |||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24737636 gaagtttgatttggtgtagtttaagaagcctaggattattacacgtgtacactagatctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 15034920 - 15035038
Alignment:
Q  6 ttgatttggtgtagtttgata-----agcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    ||||||||||||||||||| |     ||||||||||||||| || ||||||||||||||||||||||||||   | ||||||||||||||||||||||||    
T  15034920 ttgatttggtgtagtttgagaggagaagcctatgattattacacatgtacactagatctgatggttgtgaatgatttatgcacggtgcataaggatttcc 15035019  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  15035020 ttatgcaccataacttttg 15035038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 34399736 - 34399643
Alignment:
Q  26 aagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||| ||||||||||||    
T  34399736 aagcctaggattattacacgtgtacactagatctgatgattgtgaagtgtttatatacggtgcataaggatttccttatgcaccataacttttg 34399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 18611304 - 18611218
Alignment:
Q  6 ttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataa 92  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||    
T  18611304 ttgatttggtgtggtttgagaagcctatgattattacacgtgtacactagatctgatggttgtgaagtgtttatgcagagtgcataa 18611218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 877328 - 877246
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcac 83  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||||| ||||||||||||||| |||||||    
T  877328 gaagtttgatttggtgtagtttgagaagcttatgattattatacgtgtacacctgatctaatggttgtgaagtgtttatgcac 877246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 35119310 - 35119241
Alignment:
Q  46 tgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    ||||||| ||||||||||||    
T  35119310 tgtacactagatctgatggttgtgaagtgtttatgcacggtgcataagga----cttatgcaccataacttttg 35119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  63 ggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataactttt 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataaggatttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 6900938 - 6900975
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  6900938 tatgcacggtgcataaggatttccttatgcaccataac 6900975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 7765409 - 7765446
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  7765409 tatgcacggtgcataaggatttccttatgcaccataac 7765446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 15493309 - 15493346
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  15493309 tatgcacggtgcataaggatttccttatgcaccataac 15493346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 34869994 - 34869957
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34869994 tatgcacggtgcataaggatttccttatgcaccataac 34869957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 1449608 - 1449544
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  1449608 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 1449544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 1536896 - 1536960
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  1536896 atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 1536960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 31216728 - 31216664
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  31216728 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttg 31216664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 6900869 - 6900830
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  6900869 atctgatggttgtgatgtgtttatgcacggtgcataagga 6900830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 30908713 - 30908679
Alignment:
Q  61 atggttgtgaagtgtatatgcacggtgcataagga 95  Q
    ||||||||||||||| |||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataagga 30908679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 878395 - 878432
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  878395 tatgcacggtacataaggatttccttatgcaccataac 878432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 1449677 - 1449714
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  1449677 tatgcacggtgcataaggattttcttatgcaccataac 1449714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 7089217 - 7089254
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  7089217 tatgcacggtacataaggatttccttatgcaccataac 7089254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 10588958 - 10588995
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  10588958 tatgcagggtgcataaggatttccttatgcaccataac 10588995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 18755702 - 18755665
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||| |||||||||||||||||||||| |||||||    
T  18755702 tatgcaccgtgcataaggatttccttatgcaccataac 18755665  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 19284410 - 19284373
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  19284410 tatgcagggtgcataaggatttccttatgcaccataac 19284373  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 21384994 - 21385031
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  21384994 tatgcagggtgcataaggatttccttatgcaccataac 21385031  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 22857527 - 22857490
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  22857527 tatgcagggtgcataaggatttccttatgcaccataac 22857490  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 30909444 - 30909481
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  30909444 tatgcacggtgcataaggaattccttatgcaccataac 30909481  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 7089148 - 7089084
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    |||||||| |||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  7089148 atctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 7089084  T

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Target: scaffold0194 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27727 - 27609
Alignment:
Q  1 gaagtttgatttggtgtagtttgataagcctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttcc 100  Q
    |||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||| || |||||||||||| |||||||||| ||||||  |||||    
T  27727 gaagtttgatttggtgtagtttgagaagcctagaattattacacgtgtacactagatcttatagttgtgaagtgtttatgcacggtacataagtttttcc 27628  T
Q  101 ttatgctccataacttttg 119  Q
    |||||| ||||||||||||    
T  27627 ttatgcaccataacttttg 27609  T

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Target: scaffold0544 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 10668 - 10738
Alignment:
Q  49 acactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttg 119  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  10668 acactagatctgatggttgtgaagtgtttatgcacggtgtataaggatttccttatgcaccataacttttg 10738  T

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Target: scaffold0337 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 7109 - 7020
Alignment:
Q  29 cctatgattattatacgtgtacactagatctgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataactttt 118  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||| |||||||||||    
T  7109 cctaggattattacatgtgtacactagatctgatggttgtgaagtgtttatgcacggtgtataaagatttcgttatgcaccataactttt 7020  T

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Target: scaffold0189 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 11193 - 11258
Alignment:
Q  59 tgatggttgtgaagtgtatatgcacggtgcataaggatttccttatgctccataacttttgtccac 124  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  11193 tgatggttgtgaagtgcttatgcacagtgcataaggatttccttatgcaccataacttttgcccac 11258  T

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Target: scaffold0571 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 584 - 547
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  584 tatgcacggtgcataaggatttccttatgcaccataac 547  T

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Target: scaffold0571; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 676 - 740
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  676 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 740  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 24409 - 24446
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||||||||||| |||||||    
T  24409 tatgcacggtgcataaggatttccttatgcaccataac 24446  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Complemental strand, 33750 - 33686
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| |||||||||||||||||| | |  ||||||| ||||||||||||    
T  33750 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 33686  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 33819 - 33856
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  33819 tatgcacggtgcataaagatttccttatgcaccataac 33856  T

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Target: scaffold0338 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 6518 - 6556
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataact 115  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  6518 tatgcatggtgcataaggatttccttatgcaccataact 6556  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 1253 - 1290
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  1253 tatgcagggtgcataaggatttccttatgcaccataac 1290  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 23583 - 23546
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  23583 tatgcagggtgcataaggatttccttatgcaccataac 23546  T

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Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 23740 - 23776
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  23740 tatgcagggtgcataaggatttccttatgcaccataa 23776  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 20125 - 20162
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  20125 tatgcagggtgcataaggatttccttatgcaccataac 20162  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 33655 - 33618
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  33655 tatgcagggtgcataaggatttccttatgcaccataac 33618  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 21016 - 20979
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataac 114  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  21016 tatgcacggtgcataaggattttcttatgcaccataac 20979  T

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Target: scaffold0581 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 8421 - 8485
Alignment:
Q  56 atctgatggttgtgaagtgtatatgcacggtgcataagg-atttccttatgctccataacttttg 119  Q
    ||||||||||||||| |||| ||||||| |||||||||| | |  ||||||| ||||||||||||    
T  8421 atctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttg 8485  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 51944 - 51908
Alignment:
Q  77 tatgcacggtgcataaggatttccttatgctccataa 113  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  51944 tatgcagggtgcataaggatttccttatgcaccataa 51908  T

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