View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13827_low_10 (Length: 343)

Name: NF13827_low_10
Description: NF13827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13827_low_10
NF13827_low_10
[»] chr3 (65 HSPs)
chr3 (19-254)||(50092343-50092578)
chr3 (36-228)||(49867141-49867335)
chr3 (35-228)||(50065759-50065953)
chr3 (253-335)||(14645892-14645974)
chr3 (255-336)||(41727240-41727321)
chr3 (30-137)||(50816122-50816229)
chr3 (30-137)||(50859635-50859742)
chr3 (255-336)||(50092691-50092772)
chr3 (255-336)||(12077745-12077826)
chr3 (255-336)||(26517217-26517298)
chr3 (252-328)||(27638087-27638163)
chr3 (253-336)||(11388142-11388225)
chr3 (256-333)||(11344582-11344658)
chr3 (255-336)||(30476064-30476145)
chr3 (255-336)||(39617252-39617333)
chr3 (255-336)||(46048545-46048626)
chr3 (257-333)||(25750552-25750628)
chr3 (255-323)||(29676754-29676822)
chr3 (256-336)||(31819430-31819510)
chr3 (256-336)||(40645698-40645778)
chr3 (253-336)||(20945302-20945385)
chr3 (253-336)||(51263103-51263186)
chr3 (255-336)||(26043042-26043123)
chr3 (255-336)||(26121355-26121436)
chr3 (253-333)||(27047183-27047263)
chr3 (256-328)||(41543617-41543689)
chr3 (260-336)||(41739975-41740051)
chr3 (261-336)||(21932955-21933030)
chr3 (253-336)||(29645379-29645462)
chr3 (254-333)||(33287888-33287967)
chr3 (257-336)||(42010893-42010972)
chr3 (257-336)||(44083652-44083731)
chr3 (258-333)||(50524981-50525056)
chr3 (253-315)||(33411996-33412058)
chr3 (259-336)||(26998922-26998999)
chr3 (255-336)||(41308778-41308859)
chr3 (255-335)||(46435735-46435813)
chr3 (259-335)||(13084361-13084437)
chr3 (253-328)||(29611855-29611930)
chr3 (262-333)||(35055816-35055887)
chr3 (265-336)||(48309477-48309548)
chr3 (253-336)||(52325505-52325588)
chr3 (253-335)||(42891440-42891522)
chr3 (255-328)||(41825147-41825220)
chr3 (255-336)||(50363050-50363131)
chr3 (280-336)||(831362-831418)
chr3 (260-328)||(28477413-28477481)
chr3 (257-317)||(43187114-43187174)
chr3 (253-333)||(48901522-48901602)
chr3 (253-333)||(48903088-48903168)
chr3 (253-336)||(22659601-22659684)
chr3 (257-336)||(48581343-48581422)
chr3 (265-336)||(54425958-54426029)
chr3 (253-315)||(11393943-11394005)
chr3 (257-323)||(12236308-12236374)
chr3 (255-336)||(26243495-26243576)
chr3 (259-328)||(37729039-37729108)
chr3 (273-333)||(28229206-28229266)
chr3 (260-320)||(31650683-31650743)
chr3 (253-333)||(44338103-44338182)
chr3 (260-331)||(48213653-48213724)
chr3 (279-333)||(2421131-2421185)
chr3 (282-332)||(31826242-31826292)
chr3 (258-323)||(28243785-28243850)
chr3 (255-315)||(31531448-31531508)
[»] chr8 (56 HSPs)
chr8 (256-336)||(57189-57269)
chr8 (253-336)||(14577653-14577736)
chr8 (253-336)||(31746406-31746489)
chr8 (256-336)||(7172244-7172324)
chr8 (260-336)||(12762871-12762947)
chr8 (257-336)||(7772538-7772617)
chr8 (253-336)||(36437523-36437606)
chr8 (254-336)||(1177157-1177239)
chr8 (255-336)||(2562731-2562812)
chr8 (257-328)||(26878737-26878808)
chr8 (253-323)||(24962379-24962449)
chr8 (258-336)||(36309597-36309675)
chr8 (255-336)||(24512168-24512249)
chr8 (255-336)||(25198313-25198394)
chr8 (255-336)||(38761359-38761440)
chr8 (255-336)||(38770188-38770269)
chr8 (259-336)||(40337192-40337269)
chr8 (255-336)||(41086998-41087079)
chr8 (260-336)||(5191550-5191626)
chr8 (256-336)||(38202993-38203073)
chr8 (252-336)||(40602042-40602126)
chr8 (253-336)||(25888617-25888700)
chr8 (255-334)||(37141750-37141829)
chr8 (253-336)||(45203780-45203863)
chr8 (253-323)||(16644050-16644120)
chr8 (255-336)||(25185054-25185135)
chr8 (255-336)||(37956145-37956226)
chr8 (255-336)||(38773349-38773430)
chr8 (264-333)||(40517773-40517842)
chr8 (253-333)||(3006785-3006865)
chr8 (257-336)||(17933730-17933810)
chr8 (256-328)||(31673621-31673693)
chr8 (253-333)||(43980587-43980667)
chr8 (253-323)||(30262552-30262622)
chr8 (262-336)||(43191478-43191552)
chr8 (255-336)||(3113534-3113615)
chr8 (256-333)||(16002727-16002804)
chr8 (279-336)||(23280699-23280756)
chr8 (279-336)||(23399778-23399835)
chr8 (275-335)||(885505-885565)
chr8 (274-334)||(10396233-10396293)
chr8 (260-328)||(12998702-12998770)
chr8 (260-336)||(34882699-34882775)
chr8 (253-323)||(24276571-24276639)
chr8 (265-323)||(34157951-34158009)
chr8 (266-336)||(35794777-35794847)
chr8 (256-333)||(14846925-14847002)
chr8 (252-313)||(14906622-14906683)
chr8 (255-336)||(31252656-31252737)
chr8 (256-336)||(39543661-39543744)
chr8 (274-335)||(45183863-45183924)
chr8 (253-301)||(14522640-14522688)
chr8 (256-323)||(14739454-14739521)
chr8 (253-336)||(22590397-22590480)
chr8 (258-333)||(44255480-44255555)
chr8 (263-336)||(41541581-41541652)
[»] chr7 (48 HSPs)
chr7 (253-336)||(19236067-19236150)
chr7 (255-336)||(25750392-25750473)
chr7 (260-336)||(31373698-31373774)
chr7 (256-335)||(21388267-21388346)
chr7 (255-336)||(10685109-10685190)
chr7 (255-336)||(49100695-49100776)
chr7 (255-335)||(20123474-20123554)
chr7 (257-333)||(21801059-21801135)
chr7 (257-336)||(21809647-21809726)
chr7 (255-336)||(48767588-48767670)
chr7 (255-336)||(35128408-35128489)
chr7 (255-336)||(37673761-37673842)
chr7 (255-335)||(2276578-2276658)
chr7 (256-336)||(40263736-40263816)
chr7 (253-328)||(27213509-27213584)
chr7 (253-336)||(36726174-36726256)
chr7 (253-336)||(48193637-48193720)
chr7 (257-336)||(48610136-48610215)
chr7 (253-323)||(6376146-6376216)
chr7 (256-318)||(40211295-40211357)
chr7 (255-336)||(1324732-1324813)
chr7 (255-336)||(4089500-4089581)
chr7 (256-333)||(36116346-36116423)
chr7 (253-333)||(21392896-21392976)
chr7 (252-336)||(26200968-26201052)
chr7 (255-323)||(37048059-37048127)
chr7 (252-336)||(46783841-46783925)
chr7 (253-336)||(37491619-37491702)
chr7 (254-336)||(10408568-10408650)
chr7 (253-323)||(23876059-23876129)
chr7 (255-336)||(43465143-43465224)
chr7 (253-333)||(26632868-26632948)
chr7 (260-328)||(28663784-28663852)
chr7 (281-336)||(24700696-24700751)
chr7 (257-336)||(29636041-29636119)
chr7 (253-335)||(5334396-5334478)
chr7 (253-335)||(21752550-21752632)
chr7 (255-336)||(18122042-18122123)
chr7 (274-323)||(47458199-47458248)
chr7 (256-336)||(42983614-42983694)
chr7 (260-336)||(42993188-42993264)
chr7 (253-323)||(27162917-27162985)
chr7 (253-312)||(41672591-41672650)
chr7 (257-336)||(40740976-40741057)
chr7 (260-321)||(4068428-4068489)
chr7 (255-336)||(33181319-33181400)
chr7 (287-336)||(43601165-43601214)
chr7 (260-336)||(35960407-35960483)
[»] chr5 (49 HSPs)
chr5 (255-336)||(36177316-36177397)
chr5 (259-336)||(3559026-3559103)
chr5 (255-336)||(10934030-10934111)
chr5 (256-336)||(3631119-3631199)
chr5 (259-335)||(27587866-27587942)
chr5 (253-333)||(39690488-39690568)
chr5 (257-335)||(24781269-24781346)
chr5 (255-336)||(3247273-3247354)
chr5 (259-336)||(4857493-4857570)
chr5 (255-328)||(10523281-10523354)
chr5 (256-333)||(12895211-12895288)
chr5 (259-336)||(25017673-25017750)
chr5 (255-336)||(35569004-35569085)
chr5 (255-323)||(15898475-15898543)
chr5 (253-333)||(27642524-27642604)
chr5 (253-336)||(20946109-20946192)
chr5 (253-336)||(29866211-29866294)
chr5 (253-328)||(43060517-43060592)
chr5 (262-336)||(30348076-30348150)
chr5 (253-333)||(600787-600867)
chr5 (253-333)||(4745149-4745229)
chr5 (255-306)||(129634-129685)
chr5 (253-336)||(11980738-11980821)
chr5 (253-336)||(21574880-21574962)
chr5 (253-336)||(41521210-41521293)
chr5 (274-336)||(5151199-5151261)
chr5 (274-336)||(40979211-40979273)
chr5 (255-336)||(4738654-4738735)
chr5 (253-322)||(21912142-21912211)
chr5 (255-336)||(34877690-34877771)
chr5 (252-336)||(9375638-9375722)
chr5 (253-333)||(16969396-16969476)
chr5 (253-333)||(38972129-38972208)
chr5 (274-336)||(731951-732014)
chr5 (253-335)||(43454004-43454086)
chr5 (255-336)||(5845200-5845281)
chr5 (255-336)||(27798180-27798261)
chr5 (275-336)||(30317793-30317854)
chr5 (255-328)||(36347608-36347681)
chr5 (256-324)||(15967123-15967191)
chr5 (256-291)||(18729613-18729648)
chr5 (257-328)||(19281498-19281569)
chr5 (253-300)||(29874200-29874247)
chr5 (253-300)||(32067850-32067897)
chr5 (273-332)||(33583855-33583914)
chr5 (253-328)||(3529900-3529974)
chr5 (255-320)||(31642484-31642548)
chr5 (252-292)||(7510627-7510667)
chr5 (256-323)||(25690699-25690768)
[»] scaffold1091 (1 HSPs)
scaffold1091 (253-336)||(1913-1996)
[»] chr6 (27 HSPs)
chr6 (256-323)||(3729414-3729481)
chr6 (255-335)||(1763837-1763917)
chr6 (253-336)||(10669275-10669358)
chr6 (253-336)||(12514586-12514669)
chr6 (253-333)||(19838953-19839033)
chr6 (253-328)||(31945921-31945996)
chr6 (253-335)||(11302877-11302959)
chr6 (256-336)||(9461318-9461398)
chr6 (257-336)||(5895757-5895836)
chr6 (253-328)||(22410852-22410927)
chr6 (259-336)||(31152989-31153066)
chr6 (263-336)||(34513219-34513292)
chr6 (259-336)||(16327151-16327228)
chr6 (255-336)||(16350545-16350626)
chr6 (256-336)||(15981819-15981899)
chr6 (256-336)||(30465969-30466049)
chr6 (260-336)||(33607384-33607460)
chr6 (253-336)||(20522994-20523077)
chr6 (260-323)||(31780153-31780216)
chr6 (257-333)||(6791404-6791478)
chr6 (253-333)||(28238318-28238398)
chr6 (262-333)||(3887947-3888017)
chr6 (255-306)||(4250689-4250740)
chr6 (260-323)||(12514769-12514832)
chr6 (259-333)||(197455-197529)
chr6 (274-319)||(5084555-5084600)
chr6 (252-336)||(16186594-16186675)
[»] chr2 (64 HSPs)
chr2 (253-336)||(27297599-27297682)
chr2 (252-336)||(3237744-3237828)
chr2 (252-336)||(24774886-24774970)
chr2 (256-336)||(37355061-37355141)
chr2 (253-336)||(247682-247765)
chr2 (253-336)||(17250961-17251044)
chr2 (253-336)||(44424617-44424700)
chr2 (255-336)||(8065072-8065153)
chr2 (259-336)||(31644442-31644519)
chr2 (255-328)||(43650058-43650131)
chr2 (256-336)||(375345-375425)
chr2 (255-323)||(9718185-9718253)
chr2 (253-333)||(17663646-17663726)
chr2 (260-336)||(40346081-40346157)
chr2 (252-323)||(4033602-4033673)
chr2 (256-335)||(11459178-11459257)
chr2 (254-333)||(44101395-44101474)
chr2 (253-322)||(14420699-14420768)
chr2 (253-333)||(26512093-26512173)
chr2 (260-336)||(45150736-45150812)
chr2 (253-336)||(11071690-11071773)
chr2 (273-336)||(12417618-12417681)
chr2 (273-336)||(12429678-12429741)
chr2 (253-336)||(14527645-14527728)
chr2 (253-336)||(34330024-34330107)
chr2 (253-315)||(4398545-4398607)
chr2 (253-319)||(20362005-20362071)
chr2 (255-336)||(15851555-15851636)
chr2 (259-336)||(23464711-23464788)
chr2 (255-336)||(41665734-41665815)
chr2 (253-326)||(43709941-43710014)
chr2 (264-336)||(43638821-43638893)
chr2 (274-333)||(1246416-1246475)
chr2 (253-336)||(13477033-13477116)
chr2 (252-315)||(35453754-35453817)
chr2 (261-336)||(38982071-38982146)
chr2 (255-333)||(44421473-44421551)
chr2 (259-328)||(4758054-4758123)
chr2 (255-336)||(16808823-16808904)
chr2 (255-336)||(16848104-16848185)
chr2 (255-336)||(35178793-35178874)
chr2 (255-336)||(45214749-45214830)
chr2 (256-336)||(7255626-7255706)
chr2 (252-336)||(8393229-8393313)
chr2 (252-336)||(15578081-15578165)
chr2 (252-336)||(36846776-36846860)
chr2 (252-336)||(44462581-44462665)
chr2 (253-336)||(2131779-2131862)
chr2 (257-336)||(38449714-38449793)
chr2 (281-336)||(43119369-43119424)
chr2 (255-333)||(2521303-2521381)
chr2 (259-333)||(41865744-41865817)
chr2 (255-328)||(28264959-28265032)
chr2 (254-333)||(42250882-42250958)
chr2 (257-333)||(6597882-6597957)
chr2 (253-333)||(21012875-21012955)
chr2 (253-333)||(25731619-25731698)
chr2 (253-300)||(8384008-8384055)
chr2 (253-336)||(28190620-28190703)
chr2 (253-323)||(6275581-6275650)
chr2 (253-319)||(12121904-12121970)
chr2 (275-336)||(25731186-25731247)
chr2 (257-318)||(44274685-44274746)
chr2 (256-336)||(3326749-3326829)
[»] chr4 (61 HSPs)
chr4 (255-336)||(20262394-20262475)
chr4 (255-336)||(25477249-25477330)
chr4 (255-336)||(30153222-30153303)
chr4 (255-336)||(46729329-46729410)
chr4 (253-333)||(12624718-12624798)
chr4 (253-333)||(29584916-29584996)
chr4 (256-336)||(37175022-37175102)
chr4 (253-336)||(38136377-38136460)
chr4 (255-333)||(39237592-39237670)
chr4 (255-333)||(48472498-48472576)
chr4 (259-336)||(5448690-5448767)
chr4 (255-336)||(43800832-43800913)
chr4 (263-328)||(52768907-52768972)
chr4 (259-336)||(54438538-54438615)
chr4 (253-333)||(14602658-14602738)
chr4 (253-333)||(31486510-31486590)
chr4 (256-336)||(34543727-34543807)
chr4 (257-336)||(20291366-20291445)
chr4 (253-336)||(28116505-28116588)
chr4 (253-328)||(33246505-33246580)
chr4 (261-336)||(41459617-41459692)
chr4 (255-322)||(50782802-50782869)
chr4 (253-336)||(56373344-56373427)
chr4 (253-323)||(19654450-19654520)
chr4 (254-336)||(20791950-20792032)
chr4 (255-336)||(5536521-5536602)
chr4 (255-336)||(32236855-32236936)
chr4 (256-336)||(5168004-5168084)
chr4 (252-328)||(22651485-22651561)
chr4 (256-336)||(22750842-22750922)
chr4 (256-336)||(51787796-51787876)
chr4 (253-336)||(45628075-45628157)
chr4 (263-333)||(5416872-5416942)
chr4 (274-336)||(20116493-20116555)
chr4 (255-336)||(16070455-16070536)
chr4 (257-334)||(26203156-26203233)
chr4 (259-336)||(37625125-37625202)
chr4 (255-336)||(41945773-41945853)
chr4 (260-336)||(7002212-7002288)
chr4 (254-336)||(10602210-10602288)
chr4 (256-336)||(44812607-44812687)
chr4 (249-313)||(51918675-51918739)
chr4 (259-335)||(52676048-52676124)
chr4 (253-336)||(13096542-13096625)
chr4 (253-336)||(20185656-20185739)
chr4 (253-323)||(31840120-31840188)
chr4 (257-336)||(31937392-31937471)
chr4 (253-336)||(41920038-41920121)
chr4 (256-323)||(43509107-43509173)
chr4 (258-300)||(3094209-3094251)
chr4 (255-333)||(5932910-5932988)
chr4 (279-336)||(36513310-36513367)
chr4 (274-335)||(39197035-39197096)
chr4 (259-336)||(52226047-52226124)
chr4 (273-333)||(26186758-26186818)
chr4 (281-333)||(31552190-31552242)
chr4 (257-336)||(24072793-24072872)
chr4 (273-336)||(34643437-34643499)
chr4 (273-336)||(40411343-40411406)
chr4 (274-336)||(32107888-32107950)
chr4 (255-333)||(52198731-52198809)
[»] chr1 (65 HSPs)
chr1 (255-336)||(16582556-16582637)
chr1 (255-336)||(48721867-48721948)
chr1 (256-336)||(29140653-29140733)
chr1 (260-336)||(32152186-32152262)
chr1 (253-336)||(8984660-8984743)
chr1 (253-336)||(28723652-28723735)
chr1 (253-336)||(44652860-44652943)
chr1 (253-336)||(47070960-47071043)
chr1 (255-336)||(5085088-5085169)
chr1 (255-336)||(33231863-33231944)
chr1 (260-336)||(4813461-4813537)
chr1 (253-333)||(15512783-15512863)
chr1 (253-333)||(28948966-28949046)
chr1 (256-336)||(31305342-31305422)
chr1 (255-335)||(46495332-46495412)
chr1 (257-336)||(5322022-5322101)
chr1 (253-336)||(13723477-13723560)
chr1 (255-334)||(15179433-15179512)
chr1 (253-336)||(47754641-47754724)
chr1 (253-323)||(38680496-38680566)
chr1 (255-328)||(9675674-9675747)
chr1 (260-333)||(28679824-28679896)
chr1 (255-336)||(44395558-44395639)
chr1 (256-336)||(30336083-30336163)
chr1 (253-336)||(2342925-2343008)
chr1 (257-336)||(3143428-3143507)
chr1 (257-336)||(34102361-34102440)
chr1 (253-336)||(35365983-35366066)
chr1 (254-336)||(20564797-20564879)
chr1 (255-336)||(25269400-25269481)
chr1 (255-336)||(36084993-36085074)
chr1 (256-336)||(24415024-24415104)
chr1 (255-323)||(30898575-30898643)
chr1 (255-319)||(44335312-44335376)
chr1 (255-335)||(46591125-46591205)
chr1 (253-328)||(31807979-31808054)
chr1 (253-328)||(41737146-41737221)
chr1 (259-333)||(8877799-8877873)
chr1 (253-323)||(25258351-25258421)
chr1 (262-336)||(32144341-32144415)
chr1 (263-336)||(25063241-25063314)
chr1 (255-335)||(47643565-47643643)
chr1 (260-317)||(50692437-50692494)
chr1 (257-309)||(9684744-9684796)
chr1 (256-336)||(16395547-16395627)
chr1 (255-335)||(51996978-51997058)
chr1 (252-333)||(52141177-52141260)
chr1 (261-336)||(3831076-3831151)
chr1 (273-336)||(15457814-15457877)
chr1 (257-336)||(23982591-23982670)
chr1 (255-334)||(34696884-34696963)
chr1 (274-336)||(13145460-13145522)
chr1 (253-323)||(15911564-15911634)
chr1 (255-317)||(32047465-32047527)
chr1 (255-321)||(44163255-44163321)
chr1 (260-336)||(51390536-51390609)
chr1 (256-336)||(5852850-5852928)
chr1 (260-321)||(6282502-6282563)
chr1 (253-336)||(3072160-3072241)
chr1 (260-336)||(4081954-4082030)
chr1 (259-315)||(27531126-27531182)
chr1 (266-323)||(291647-291704)
chr1 (274-335)||(4817906-4817967)
chr1 (274-335)||(4829706-4829767)
chr1 (274-323)||(35001282-35001331)
[»] scaffold0166 (1 HSPs)
scaffold0166 (257-335)||(23652-23729)
[»] scaffold0005 (1 HSPs)
scaffold0005 (253-333)||(214640-214720)
[»] scaffold0012 (1 HSPs)
scaffold0012 (265-336)||(99817-99888)
[»] scaffold0013 (2 HSPs)
scaffold0013 (257-336)||(61282-61361)
scaffold0013 (257-333)||(49162-49238)
[»] scaffold0182 (1 HSPs)
scaffold0182 (255-336)||(22084-22165)
[»] scaffold0038 (1 HSPs)
scaffold0038 (253-333)||(38480-38560)
[»] scaffold0699 (1 HSPs)
scaffold0699 (257-336)||(7604-7682)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 50092343 - 50092578
Alignment:
Q  19 atgtctgtgatgaaactgctccaaaagatgtttataggaaaagaagaagttataagctgtctccctctggtaaagttgcttgggaaacaatgactggaat 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50092343 atgtttgtgatgaaactgctccaaaagatgtttataggaaaagaaaaagttataaactgtctccctctggtaaagttgcttgggaaacaatgactggaat 50092442  T
Q  119 tcaagaggactgtatttcattttttcggcatatgggcaagaacaactcccttttgtttcaattgttgtggaatggatggttacgggtggctcactaaaag 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50092443 tcaagaggactgtatttcattttttcggcatatgggcaagaacaactcccttttgtttcaattgttgtggaatggatggttacgggtggctcactaaaag 50092542  T
Q  219 acgaaagcattcattcatgtcacaaatatgaaaatt 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  50092543 acgaaagcattcattcatgtcacaaatatgaaaatt 50092578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 49867335 - 49867141
Alignment:
Q  36 gctccaaaagatgtttataggaaaagaagaagttataagctgtctccctctggtaaagttgcttgggaaacaatgactggaattcaagaggactgtattt 135  Q
    ||||||||| |||||||| ||||||||| |||||  |   |||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  49867335 gctccaaaacatgtttattggaaaagaaaaagttccagattgtcaccctctgatagagttgcttgggaaacaatgactggaattcaagaggactgtattt 49867236  T
Q  136 ca--ttttttcggcatatgggcaagaacaactcccttttgtttcaattgttgtggaatggatggttacgggtggctcactaaaagacgaaagcat 228  Q
    ||  ||||||| ||| | ||| ||||||||||||||| ||||||||||   ||||||||| || ||||  ||| | || ||||||| ||||||||    
T  49867235 caccttttttcagcagacgggaaagaacaactcccttctgtttcaatttccgtggaatggctgcttacaagtgacccattaaaagaagaaagcat 49867141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 228
Target Start/End: Complemental strand, 50065953 - 50065759
Alignment:
Q  35 tgctccaaaagatgtttataggaaaagaagaagttataagctgtctccctctggtaaagttgcttgggaaacaatgactggaattcaagaggactgtatt 134  Q
    ||||||||||||||||||||||||||||| ||||| |   || ||||| |||| ||  ||||||||||||||||||||||||||||| ||||||  ||||    
T  50065953 tgctccaaaagatgtttataggaaaagaaaaagttctggactttctccttctgatagggttgcttgggaaacaatgactggaattcaggaggaccatatt 50065854  T
Q  135 tcat-tttttcggcatatgggcaagaacaactcccttttgtttcaattgttgtggaatggatggttacgggtggctcactaaaagacgaaagcat 228  Q
    |||| |||| | ||| |||||||||||| |||||||   ||||||||||| | |||||||||| || | ||||   |||||||||| ||||||||    
T  50065853 tcatcttttgcagcagatgggcaagaacgactccctgccgtttcaattgtcgaggaatggatgctttcaggtgatccactaaaagatgaaagcat 50065759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 14645974 - 14645892
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||||||    
T  14645974 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgatttttca 14645892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 41727321 - 41727240
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  41727321 agtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcctttatttgtatgtgtattaaatttgacttttcat 41727240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 50816122 - 50816229
Alignment:
Q  30 gaaactgctccaaaagatgtttataggaaaagaagaagttataagctgtctccctctggtaaagttgcttgggaaacaatgactggaattcaagaggact 129  Q
    ||||||||||||||||||||||| |||||||||| |||||  |  | ||||||||||| || ||||||| ||||||||||||||||| |||||||||||     
T  50816122 gaaactgctccaaaagatgtttacaggaaaagaaaaagttgcagaccgtctccctctgatagagttgctcgggaaacaatgactggagttcaagaggacc 50816221  T
Q  130 gtatttca 137  Q
    ||||||||    
T  50816222 gtatttca 50816229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 50859742 - 50859635
Alignment:
Q  30 gaaactgctccaaaagatgtttataggaaaagaagaagttataagctgtctccctctggtaaagttgcttgggaaacaatgactggaattcaagaggact 129  Q
    ||||||||||||||||||||||| |||||||||| |||||  |  | ||||||||||| || ||||||| ||||||||||||||||| |||||||||||     
T  50859742 gaaactgctccaaaagatgtttacaggaaaagaaaaagttgcagaccgtctccctctgatagagttgctcgggaaacaatgactggagttcaagaggacc 50859643  T
Q  130 gtatttca 137  Q
    ||||||||    
T  50859642 gtatttca 50859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 50092691 - 50092772
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  50092691 agtgtaattaatgtgttggttttgtgtattaatattacaaaattgtcctttatttgtatgtgtattaaaattgtcttttcat 50092772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 12077826 - 12077745
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  12077826 agtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 12077745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 26517298 - 26517217
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| |||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||    
T  26517298 agtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtcctttatttgtatgtgtattaaatttgacttttcat 26517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 27638163 - 27638087
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||    
T  27638163 attagtgtaattaatgtctctattttgtgtgttaatattataaaattgtcctttgtttgtatgtgtattaaatttga 27638087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 11388142 - 11388225
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  11388142 ttagtgtaattaatgtgtctattttgcgtgttaatattaccaaattgtattttgtttgtatgtgtattaaatttgacttttcat 11388225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 11344582 - 11344658
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||||| |||||||||||||| ||||| ||||| |||||| ||||||||||||||||| |||||||||    
T  11344582 gtgtaattaatgtgtctattttgtgtgttaacattaccaaattattcttt-tttgtatgtgtattaaatttgattttt 11344658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 30476064 - 30476145
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||||| ||||||| |||| |||||||    
T  30476064 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtctattaaatttgacttttcat 30476145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 39617333 - 39617252
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  39617333 agtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 39617252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 46048545 - 46048626
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||| |||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  46048545 agtgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 46048626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 25750552 - 25750628
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||| |||| |||||||||||||||||||| || ||||||||| ||||||||||||||||| |||| ||||    
T  25750552 tgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttgtttgtatgtgtattaaatttgactttt 25750628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 29676822 - 29676754
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||||  |||||||||||||||||||||    
T  29676822 agtgtaattaatgtgtctattttatgtgttaatattacgaaattgtcttttatttgtatgtgtattaaa 29676754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 31819430 - 31819510
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  31819430 gtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 31819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 40645698 - 40645778
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| ||| ||||||||    
T  40645698 gtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaacttggtttttcat 40645778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 20945385 - 20945302
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| ||||| ||||||||||||||  |||| | |||| ||||||||||||||||| |||| |||||||    
T  20945385 ttagtgtaattaatgtgtctattttatgtgttaatattacctaattatcctttgtttgtatgtgtattaaatttgacttttcat 20945302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 51263103 - 51263186
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  |||| ||||||| |||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  51263103 ttagtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 51263186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 26043042 - 26043123
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  |||||||||||||| |||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  26043042 agtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 26043123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 26121355 - 26121436
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||   ||||||||||||||||||  ||||||| |||| ||||||||||||||||| |||| |||||||    
T  26121355 agtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaacttgacttttcat 26121436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 27047263 - 27047183
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||  ||| |||||||||| |||||| |||| ||||    
T  27047263 ttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttgactttt 27047183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 41543689 - 41543617
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||| |||||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||||| ||||    
T  41543689 gtgtatttaatgtgtctattttgtgtgataatattataaaattgtcttttatttgtatgtgtattaaatttga 41543617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 41740051 - 41739975
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||| ||||| | |||| ||||||||||| ||||| |||| |||||||    
T  41740051 aattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgaattttcat 41739975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 21932955 - 21933030
Alignment:
Q  261 attaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| |||||||||||||||||||| ||||| | |||| ||||||||||| ||||| |||| |||||||    
T  21932955 attaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 21933030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 29645379 - 29645462
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| ||  |||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  29645379 ttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 29645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 33287888 - 33287967
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||| |||| ||||| ||||||||||| |||| ||||    
T  33287888 tagtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttgtttgtttgtgtattaaatttgactttt 33287967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 42010893 - 42010972
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||| |||||||||||||||||||  ||||| |||||| ||||||||| | ||||| |||| |||||||    
T  42010893 tgtaattaatgtgtctattttgtgtgttaatattatcaaattattctttgtttgtatgtatgttaaatttgacttttcat 42010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 44083652 - 44083731
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| || |||||||||||||||||||| ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  44083652 tgtaattaatgtatctattttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 44083731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 333
Target Start/End: Complemental strand, 50525056 - 50524981
Alignment:
Q  258 gtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||| |||  |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  50525056 gtaattaatatgtatattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 50524981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 33412058 - 33411996
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||    
T  33412058 ttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttttttctttgtatgt 33411996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 26998922 - 26998999
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| || ||||||| |||||||||||| |||||||  ||| |||||| |||||||||| ||||||||||||    
T  26998922 taattaatgtatctattttgtttgttaatattacgaaattgtcttttgtttgtacgtgtattaaatttgatttttcat 26998999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 41308859 - 41308778
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| || || |||||| ||| ||||||||||||| |||  |||||||    
T  41308859 agtgtaattaatgtgtctgttttgtgtgttaatattaccaatttattctttgtttatatgtgtattaaatttggcttttcat 41308778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 46435813 - 46435735
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||  ||||||||| |||| ||||||    
T  46435813 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgta--tgtattaaatttgacttttca 46435735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 13084437 - 13084361
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||  ||||||||||||||||||| ||||| |  ||| ||||||||||||||||| |||| ||||||    
T  13084437 taattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttca 13084361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 29611855 - 29611930
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||| |  ||| ||||||||||||| ||| ||||    
T  29611855 ttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtatcaaatttga 29611930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 35055816 - 35055887
Alignment:
Q  262 ttaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||| |||||||||||||||||||| |||||||  |||  |||||||||||||||| |||| ||||    
T  35055816 ttaatgtgtctattttgtgtgttaatattaccaaattgtcatttgcttgtatgtgtattaaatttgactttt 35055887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 48309477 - 48309548
Alignment:
Q  265 atgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| ||||||| |||||||||||||||||| | |||| ||||||||||| ||||| |||| |||||||    
T  48309477 atgtgtctattttgtatgttaatattacaaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 48309548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 52325588 - 52325505
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| ||||| |||||||||||||  ||||||| |||| ||| ||||| ||||| | || |||||||||    
T  52325588 ttagtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttgtttatatgtttattacattttatttttcat 52325505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 42891440 - 42891522
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||| |||||||| ||||  ||||||||||||||||||| ||| ||| |||| ||||||||| ||||||| |||| ||||||    
T  42891440 ttagtataattaatttgtctgttttgtgtgttaatattaccaaactgtcctttgtttgtatgtatattaaatttgacttttca 42891522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 41825220 - 41825147
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||| |  ||| ||||||||||||| ||| ||||    
T  41825220 agtgtaattaatgtgtctattttatgtgttaatattaccaaattatcttttgtttgtatgtgtatcaaatttga 41825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 50363050 - 50363131
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  |||| ||| |||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  50363050 agtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 50363131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 831418 - 831362
Alignment:
Q  280 gtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| ||||||| |||| ||| ||||||||||||| ||||||||||||    
T  831418 gtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgatttttcat 831362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 28477413 - 28477481
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||  ||||||||||||||||||| |||||||  ||| |||||||||| |||||| ||||    
T  28477413 aattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttgtttgtatgtgcattaaatttga 28477481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 43187174 - 43187114
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgt 317  Q
    |||||||||||||||  |||||||| |||||||||| ||||||| |||| |||||||||||    
T  43187174 tgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttgtttgtatgtgt 43187114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 48901602 - 48901522
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| ||||||| |||| |||||||||||||||||||| |||||||  ||| ||||||| | ||||||| |||| ||||    
T  48901602 ttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgactttt 48901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 48903168 - 48903088
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| ||||||| |||| |||||||||||||||||||| |||||||  ||| ||||||| | ||||||| |||| ||||    
T  48903168 ttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttgtttgtatatatattaaatttgactttt 48903088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 22659601 - 22659684
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| |||||||||| |  |||||||||||||||||||| ||||| |  ||| ||||||||||||||||| || | |||||||    
T  22659601 ttagtataattaatgtatttattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttaacttttcat 22659684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 48581343 - 48581422
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||||||||  ||||||||| |||||||||  ||| | | |||||||| ||||||||||||| ||||||||||||    
T  48581343 tgtagttaatgtgtttattttgtgtattaatattaacaaactatcctttatttttatgtgtattaaatttgatttttcat 48581422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 54426029 - 54425958
Alignment:
Q  265 atgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||  ||||||||||||||||||| |||||||  ||| ||| ||||||||||||| || |||||||||    
T  54426029 atgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttatatgtgtattaaatttaatttttcat 54425958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 11393943 - 11394005
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||||  ||||||| |||||    
T  11393943 ttagtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtcatttatttatatgt 11394005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 12236308 - 12236374
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||| | ||||   ||||||||||||  |||||||||||||||||||| |||||||||    
T  12236308 tgtaattaatgtggctatttcacgtgttaatattatcaaattgttctttatttgtatttgtattaaa 12236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 26243495 - 26243576
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||   |||||||||||||| |||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  26243495 agtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 26243576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 37729108 - 37729039
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||| |||||||||||||||||||  | ||| |  ||| ||||||||||||||||| ||||    
T  37729108 taattaatgtgtctattttgtgtgttaatattatcatattatcttttgtttgtatgtgtattaaatttga 37729039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 28229206 - 28229266
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| ||| |||||||||| ||||||| |||||||||||||| ||||||| |||| ||||    
T  28229206 attttatgtattaatattaccaaattgtcctttatttgtatgtatattaaatttgactttt 28229266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 31650743 - 31650683
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtatt 320  Q
    |||||||||||| ||||| |||| ||||||||| |||||||  ||||||||||||| ||||    
T  31650743 aattaatgtgtctattttatgtggtaatattaccaaattgtcatttatttgtatgtatatt 31650683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 44338103 - 44338182
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| ||||| |||| | ||| |||||||||||||| ||||||| |||| ||| ||||||||||||| |||| ||||    
T  44338103 ttagtgtagttaat-tgtctaatttttgtgttaatattaccaaattgtcctttgtttctatgtgtattaaatttgactttt 44338182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 48213653 - 48213724
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattt 331  Q
    |||||||||||  ||||||||||||||||||||   ||| |  ||||||||||||||||||||  |||||||    
T  48213653 aattaatgtgtttattttgtgtgttaatattaccttattatcatttatttgtatgtgtattaattttgattt 48213724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 2421131 - 2421185
Alignment:
Q  279 tgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||| |||| ||||    
T  2421131 tgtgttaatattacaaaattgtcatttgtttgtatgtatattaaatttgactttt 2421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 31826242 - 31826292
Alignment:
Q  282 gttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttt 332  Q
    ||||||||||   ||||||||||| ||||||||||||||||| ||||||||    
T  31826242 gttaatattatctaattgttctttgtttgtatgtgtattaaatttgatttt 31826292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 28243785 - 28243850
Alignment:
Q  258 gtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||  ||||||||||||||||| |  ||||||| |||| ||| | |||||||||||    
T  28243785 gtaattaatgtgtttattttgtgtgttaatataatcaaattgtcctttgtttatgtgtgtattaaa 28243850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 31531508 - 31531448
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    |||||||||||||||||  ||||||||||| ||||||  |||||||  ||| |||||||||    
T  31531508 agtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttgtttgtatgt 31531448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 57269 - 57189
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  57269 gtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttctttatttgtatgtgtattaaatttgacttttcat 57189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 14577736 - 14577653
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||||||||| ||||||||||||    
T  14577736 ttagtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttgtttgtatgtgtattaaatttgatttttcat 14577653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 31746489 - 31746406
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  31746489 ttagtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 31746406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 7172244 - 7172324
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||  ||| |||||||||| ||||||||||| |||||||    
T  7172244 gtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttgtttgtatgtgcattaaaattgacttttcat 7172324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 12762871 - 12762947
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  12762871 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 12762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 7772538 - 7772617
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||| || | |||||||    
T  7772538 tgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttatttgtatgtgtattaaatttcacttttcat 7772617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 36437523 - 36437606
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| |||||||||||||| ||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  36437523 ttagtgcaattaatgtgtctattttgtgtgttaacattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 36437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 1177239 - 1177157
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||  |||||| | |||||||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  1177239 tagtgtaattaatgtgtctgttttgtatattaatattacgaaattgtcttttatttgtatgtgtattaaatttgatttttcat 1177157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 2562812 - 2562731
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  2562812 agtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 2562731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 26878808 - 26878737
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||| ||||||| ||||    
T  26878808 tgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtatattaaatttga 26878737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 24962449 - 24962379
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| |||||||||||||||||    
T  24962449 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaa 24962379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 36309675 - 36309597
Alignment:
Q  258 gtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  36309675 gtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 36309597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 24512249 - 24512168
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  24512249 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 24512168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 25198313 - 25198394
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||| |||| ||||||||||||| ||| |||| |||||||    
T  25198313 agtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtataaaatttgacttttcat 25198394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 38761440 - 38761359
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  38761440 agtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 38761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 38770269 - 38770188
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||  ||| ||||||||||||||||  |||| |||||||    
T  38770269 agtgtaattaatgtgtttattttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaattttgacttttcat 38770188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 40337269 - 40337192
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||   |||||| |||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||    
T  40337269 taattaatgtgtatgttttgtatgttaatattacaaaattgtcctttgtttgtatgtgtatttaaattgacttttcat 40337192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 41086998 - 41087079
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||   |||||||||||||||||  ||||| | |||| ||||||||||||||||| ||||||||||||    
T  41086998 agtgtaattaatgtgtctgatttgtgtgttaatattatcaaattttcctttgtttgtatgtgtattaaatttgatttttcat 41087079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 5191626 - 5191550
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||  ||||||||||||||||||| ||||||| | || ||| ||||||||||||| ||||||||||||    
T  5191626 aattaatgtgtctgttttgtgtgttaatattaccaaattgtccattgtttatatgtgtattaaatttgatttttcat 5191550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 38203073 - 38202993
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| |||   ||||||||||||||||||| |||||||  ||| ||||||||||||||||| ||||||||||||    
T  38203073 gtgtaattaatatgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 38202993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 40602126 - 40602042
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| ||||||||||||   ||| |||||||||||||| ||||| | |||| ||||||||||||||||| ||||||||||||    
T  40602126 attagtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttgatttttcat 40602042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 25888617 - 25888700
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |||| ||||||| |||||||||||  | |||||  ||| ||||||||||||||||| ||||||||||||    
T  25888617 ttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttgtttgtatgtgtattaaatttgatttttcat 25888700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 37141750 - 37141829
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttc 334  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||    
T  37141750 agtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttc 37141829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 45203780 - 45203863
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||||| |||||||||||| || |||| |||| |||||||| |||||||| |||| |||||||    
T  45203780 ttagtgcaattaatgtgtctattttgtatgttaatattaccaacttgtcctttgtttgtatgcgtattaaatttgacttttcat 45203863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 16644120 - 16644050
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||||  ||||||||||||||||| || |||||||||||| | ||||||||| |||||    
T  16644120 ttagtgtaattaatgtgtatattttgtgtgttaatatcactaaattgttctttgtctgtatgtgtgttaaa 16644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 25185054 - 25185135
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||||||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||  |||||||    
T  25185054 agtgtaactaatgtgtctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgtcttttcat 25185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 37956145 - 37956226
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| || |||| |||| ||||||||| ||||| | |||| |||||||    
T  37956145 agtgtaattaatgtgtctgttttgtgtgttaatattacgaatttgtcctttgtttgtatgtatattagatttgacttttcat 37956226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 38773430 - 38773349
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| ||||||||||||  ||||||||||||| ||||| |||||||  ||| ||||||||||||| ||| ||||||||||||    
T  38773430 agtgcaattaatgtgtctgttttgtgtgttaacattacgaaattgtcttttgtttgtatgtgtatgaaatttgatttttcat 38773349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 40517773 - 40517842
Alignment:
Q  264 aatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  40517773 aatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 40517842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 3006865 - 3006785
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| |||||||| |||| ||||| |||||||||||||| ||||| |  ||||| |||||||||||||||||||| ||||    
T  3006865 ttagtataattaatatgtctattttatgtgttaatattactaaattatcatttatctgtatgtgtattaaaattgactttt 3006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 17933730 - 17933810
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgtt-aatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||  ||| ||||||||||||||||| |||| |||||||    
T  17933730 tgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttgtttgtatgtgtattaaatttgacttttcat 17933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 328
Target Start/End: Original strand, 31673621 - 31673693
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||||  ||||||| |||||||||||| ||||| | |||| ||||||||||||||||| ||||    
T  31673621 gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttgtttgtatgtgtattaaatttga 31673693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 43980667 - 43980587
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||| |  ||| ||||||||||||||||| |||| ||||    
T  43980667 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcatttgtttgtatgtgtattaaatttgactttt 43980587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 30262622 - 30262552
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||||  ||| ||||||||||| |||||    
T  30262622 ttagtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcatttgtttgtatgtgtcttaaa 30262552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 43191552 - 43191478
Alignment:
Q  262 ttaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| ||||| |||||||||||||| |||||||  ||| ||||||||||||||||| || | |||||||    
T  43191552 ttaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaaattttcat 43191478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 3113615 - 3113534
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  ||||||||||||||||||  |||||||  ||| ||| ||||||||||||| || |||||||||    
T  3113615 agtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttgtttatatgtgtattaaatttaatttttcat 3113534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 16002804 - 16002727
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||  ||||||||||||||||||  ||||| | |||| ||||||| ||||||||| |||| ||||    
T  16002804 gtgtaattaatgtgtcagttttgtgtgttaatattaagaaattatcctttgtttgtatttgtattaaatttgactttt 16002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 23280699 - 23280756
Alignment:
Q  279 tgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| ||||||| |||| ||||||||| ||||||| ||||||||||||    
T  23280699 tgtgttaatattactaaattgtcctttgtttgtatgtttattaaatttgatttttcat 23280756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 23399835 - 23399778
Alignment:
Q  279 tgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  23399835 tgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 23399778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 335
Target Start/End: Original strand, 885505 - 885565
Alignment:
Q  275 tttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||||||  ||||||| |||| ||||||||||||||||| |||| ||||||    
T  885505 tttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgacttttca 885565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 10396293 - 10396233
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttc 334  Q
    ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||    
T  10396293 ttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgacttttc 10396233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 12998770 - 12998702
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||   ||||||||||| |||||||| ||||||| |||| ||||||||||||||||| ||||    
T  12998770 aattaatgtgcatattttgtgtgtgaatattactaaattgtcctttgtttgtatgtgtattaaatttga 12998702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 34882699 - 34882775
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||  ||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  34882699 aattaatgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtgttaaatttgacttttcat 34882775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 24276639 - 24276571
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||| ||||||||||||| |||  ||||||||||||||| |||||||  ||| |||||||||||||||||    
T  24276639 ttagtataattaatgtgtctatt--gtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaa 24276571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 34157951 - 34158009
Alignment:
Q  265 atgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||| ||||| |||||||||||||| |||||||  ||| |||||||||||||||||    
T  34157951 atgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaa 34158009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 336
Target Start/End: Original strand, 35794777 - 35794847
Alignment:
Q  266 tgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||||| |||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  35794777 tgtgtctattttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 35794847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 14847002 - 14846925
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||   |||||| ||||||||||| | |||||  ||| ||||||||||||||||| |||| ||||    
T  14847002 gtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttgtttgtatgtgtattaaatttgactttt 14846925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 14906622 - 14906683
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtat 313  Q
    |||| |||||||||| |||| |||||||||||||||||||| ||||| | |||| |||||||    
T  14906622 attaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcctttgtttgtat 14906683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 31252737 - 31252656
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||     ||| |||| |||||||||||| |||| |||||||    
T  31252737 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaataaacatttgtttgcatgtgtattaaatttgacttttcat 31252656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 39543744 - 39543661
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatatta---caaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  ||||||| ||||||||||   | |||||||  ||| ||||||||||||||||| |||| |||||||    
T  39543744 gtgtaattaatgtgtctgttttgtgcgttaatattattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 39543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 45183924 - 45183863
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||| |||||||||||||| ||||||| |||| ||| ||||||||||||| |||| ||||||    
T  45183924 ttttatgtgttaatattaccaaattgtcctttgtttatatgtgtattaaatttgacttttca 45183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 14522688 - 14522640
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgtt 301  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  14522688 ttagtgtaattaatgtgtatgttttgtgtgttaatattaccaaattgtt 14522640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 14739454 - 14739521
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||  ||||| | |||||||||||| ||||| | |||| ||||| |||||||||||    
T  14739454 gtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttgtttgtgtgtgtattaaa 14739521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 22590397 - 22590480
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||| ||||||||||| || ||||||| | || |||||||  || ||||| |||| |||||||    
T  22590397 ttagtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtccattgtttgtataagtgttaaatttgacttttcat 22590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 333
Target Start/End: Original strand, 44255480 - 44255555
Alignment:
Q  258 gtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||| |  ||||||||||||||||||  |||||||  ||| |||||| |||||||||| |||| ||||    
T  44255480 gtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttgtttgtacgtgtattaaatttgactttt 44255555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 41541581 - 41541652
Alignment:
Q  263 taatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||| ||||||||||| |||||||  ||||||| |||||||  ||| ||||||||| |||| |||||||    
T  41541581 taatgtgtctattttgtgtgtcaatattatcaaattgtcctttatt--tatatgtattaaatttgacttttcat 41541652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 19236150 - 19236067
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||| |||||| |||||||||||| | |||||||||| ||||||||||||||||| ||||||||||||    
T  19236150 ttagtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttgtttgtatgtgtattaaatttgatttttcat 19236067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 25750392 - 25750473
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||    
T  25750392 agtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 25750473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 31373774 - 31373698
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  31373774 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 31373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 21388267 - 21388346
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||||    
T  21388267 gtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttca 21388346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 10685109 - 10685190
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  10685109 agtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 10685190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 49100695 - 49100776
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  49100695 agtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 49100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 20123474 - 20123554
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||| |||| ||||||||||||||||| |||| ||||||    
T  20123474 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaatttgaattttca 20123554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 21801135 - 21801059
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||||  ||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| ||||    
T  21801135 tgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttatttgtatgtgtattaaatttgactttt 21801059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 21809726 - 21809647
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  |||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  21809726 tgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 21809647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 48767588 - 48767670
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttcttt-atttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| ||||  ||||||||||||||||| |||| |||||||    
T  48767588 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgttttgtatgtgtattaaatttgacttttcat 48767670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 35128408 - 35128489
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  ||||||||||||||||||  ||||||| |||| ||||||||||||||||| |||| |||||||    
T  35128408 agtgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaatttgaattttcat 35128489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 37673761 - 37673842
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  37673761 agtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 37673842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 2276658 - 2276578
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||| ||||| ||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||||    
T  2276658 agtgtagttaatttgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttca 2276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 40263736 - 40263816
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||  ||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  40263736 gtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 40263816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 27213509 - 27213584
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||| || |||| |||| |||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||    
T  27213509 ttagtgcaactaatatgtctattttgtgtgttaatattactaaattgtcctttgtttgtatgtctattaaaattga 27213584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 36726256 - 36726174
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||||| |||| ||| ||||||||||||| |||| |||||||    
T  36726256 ttagtgtaattaatgtgtttgttttgtgtgttaatattaccaaattgtcctttgttt-tatgtgtattaaatttgacttttcat 36726174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 48193637 - 48193720
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| | |||| ||| |||  |||||||| |||| |||||||    
T  48193637 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttatattagtattaaatttgacttttcat 48193720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 48610215 - 48610136
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  |||||||| |||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  48610215 tgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 48610136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 6376216 - 6376146
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||| ||  ||||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  6376216 ttagtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaa 6376146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 40211357 - 40211295
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgta 318  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||  ||||||||||||||||    
T  40211357 gtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcatttatttgtatgtgta 40211295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 1324732 - 1324813
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||||||||| |||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  1324732 agtgtaattaatgtgtctgttttgtgtgttaatcttatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 1324813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 4089581 - 4089500
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |  ||| ||||||| ||||||||| |||| |||||||    
T  4089581 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattatcttttgtttgtatatgtattaaatttgacttttcat 4089500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 36116346 - 36116423
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||  |||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  36116346 gtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgactttt 36116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 21392976 - 21392896
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||| |||||| ||||||||||||| ||||| |  ||| ||||||||||||||||| |||| ||||    
T  21392976 ttagtgcaattaatgtgtctattttgagtgttaatattaccaaattatattttgtttgtatgtgtattaaatttgactttt 21392896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 26201052 - 26200968
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| ||||| |||||| ||||||||| |||||||||  ||||| |||||| ||||||||||||||||| || | |||||||    
T  26201052 attagtgcaattattgtgtctattttgtgtattaatattatcaaattattctttgtttgtatgtgtattaaatttaacttttcat 26200968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 37048059 - 37048127
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||||  |||||||||||||| || | ||||||| |||| |||||||||||||||||    
T  37048059 agtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttgtttgtatgtgtattaaa 37048127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 46783925 - 46783841
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||||||||| || || |||||||||||||| |||||||  ||| || |||||||||||||| |||| |||||||    
T  46783925 attagtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtcttttgttcgtatgtgtattaaatttgacttttcat 46783841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 37491702 - 37491619
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||| | |||||||||||| ||||| | |||| ||||||| ||||||||| |||| |||||||    
T  37491702 ttagtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttgtttgtatatgtattaaatttgacttttcat 37491619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 10408650 - 10408568
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||  ||||||||| | ||||||||| ||| |||| || |||| |||| ||||||||||||||||| ||||||||||||    
T  10408650 tagtgtagataatgtgtctagtttgtgtgtgaattttactaatttgtcctttgtttgtatgtgtattaaatttgatttttcat 10408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 23876059 - 23876129
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||| ||||| |||| ||||| |||||||||||||| |||||||  ||| |||||||||||||||||    
T  23876059 ttagtgtagttaatatgtccattttatgtgttaatattactaaattgtcttttgtttgtatgtgtattaaa 23876129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 43465224 - 43465143
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||||||| ||||   |||||||  ||| ||||||||||||||||| |||| |||||||    
T  43465224 agtgtaattaatgtgtctgttttgtgtgttagtattttcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 43465143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 26632868 - 26632948
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||| |  ||| |||||||||| |||||| |||| ||||    
T  26632868 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcttttgtttgtatgtgcattaaatttgactttt 26632948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 28663784 - 28663852
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||| |||||||||||||||||||  ||||| || ||| ||||||||| ||||||| ||||    
T  28663784 aattaatgtgtctattttgtgtgttaatattatcaaattattatttgtttgtatgtatattaaatttga 28663852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 24700751 - 24700696
Alignment:
Q  281 tgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||| ||||||||||||||||  |||| |||||||    
T  24700751 tgttaatattaccaaattgttctttgtttgtatgtgtattaatgttgacttttcat 24700696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 29636119 - 29636041
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||||||||||| ||||||  |||| ||| |||||||||| || || |||||||||    
T  29636119 tgtaattaatgtgtctgttttgtgtgttaatattaccaaattg-cctttgtttttatgtgtatttaatttaatttttcat 29636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 5334478 - 5334396
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||||   |||||| |||||||||||| ||| | |  ||| ||||||||||||||||| |||| ||||||    
T  5334478 ttagtgtaattaatgtgtttgttttgtatgttaatattaccaaactatcatttgtttgtatgtgtattaaatttgacttttca 5334396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 21752550 - 21752632
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||| ||||||| |||  |||||||| ||||||||||| ||||| |  ||| ||||||||||||||||| |||| ||||||    
T  21752550 ttagtgcaattaatttgtttattttgtgggttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttca 21752632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 18122123 - 18122042
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| ||||||  |||| |||||||||||||| ||||| | |||| |||| |||||||| ||| |||| |||||||    
T  18122123 agtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctttgtttgaatgtgtataaaatttgacttttcat 18122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 47458248 - 47458199
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  47458248 ttttgtgtgttaatattatgaaattgtcctttgtttgtatgtgtattaaa 47458199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 42983694 - 42983614
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||| | |||||||||||  |||||||  | | ||||||||||||||||| |||| |||||||    
T  42983694 gtgtaattaatgtgtctcttttatatgttaatattattaaattgtcttatgtttgtatgtgtattaaatttgacttttcat 42983614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 42993264 - 42993188
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||| ||||| |||||||||||||  |||||   |||| || |||||||||||||| ||||||||||||    
T  42993264 aattaacgtgtctattttatgtgttaatattatcaaattaacctttgttagtatgtgtattaaatttgatttttcat 42993188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 27162985 - 27162917
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||| |||||||||||  ||||||||| |||||||| | |||||||  ||| |||||||||||||||||    
T  27162985 ttagtgcaattaatgtgt--attttgtgttttaatattgccaaattgtcatttgtttgtatgtgtattaaa 27162917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 41672650 - 41672591
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgta 312  Q
    ||||||||||||||||||| ||||||||||| ||||| || ||||| | |||| ||||||    
T  41672650 ttagtgtaattaatgtgtctattttgtgtgtgaatataactaaattatcctttgtttgta 41672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 40740976 - 40741057
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttg--tatgtgtattaaaattgatttttcat 336  Q
    |||||||||| |||| |||||||||||||||||||| ||||| |  ||| ||||  ||||||| ||||| |||| |||||||    
T  40740976 tgtaattaatatgtctattttgtgtgttaatattaccaaattatcatttctttgtatatgtgtgttaaatttgacttttcat 40741057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 4068428 - 4068489
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtatta 321  Q
    ||||||| | || ||||||| |||||||||||  ||||| |||||| |||||||||||||||    
T  4068428 aattaatatatctattttgtatgttaatattatcaaattattctttgtttgtatgtgtatta 4068489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 33181319 - 33181400
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||   |||||| | |||||||||| |||||||  ||| ||||||||||||||||| || | |||||||    
T  33181319 agtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttgtttgtatgtgtattaaatttaacttttcat 33181400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 43601214 - 43601165
Alignment:
Q  287 tattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |||| ||| ||||||||||||| |||| |||||||    
T  43601214 tattacaaaattgtcctttgtttatatgtgtattaaatttgacttttcat 43601165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 35960407 - 35960483
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||| ||| || ||||||| ||||| |  ||| ||||||||||| ||||| |||| |||||||    
T  35960407 aattaatgtgtctattttatgtatttatattactaaattatcttttgtttgtatgtgtgttaaatttgacttttcat 35960483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 36177316 - 36177397
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  36177316 agtgtaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 36177397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 3559103 - 3559026
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  3559103 taattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 3559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 10934030 - 10934111
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||| |||||||||||| ||||| |||||| ||||||||||||||||| |||| |||||||    
T  10934030 agtgtaattaatgtgtctgttttgtatgttaatattaccaaattattctttgtttgtatgtgtattaaatttgacttttcat 10934111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 3631199 - 3631119
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||| |||||||||||||||||||  |||||  |||| ||||||||||||||||| |||| |||||||    
T  3631199 gtgtaattaatgtgtcggttttgtgtgttaatattacgcaattgacctttgtttgtatgtgtattaaatttgacttttcat 3631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 27587866 - 27587942
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||  ||||||||||||||||||| ||||||| |||| | ||||||||||||||| |||||||||||    
T  27587866 taattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtatgtatgtgtattaaatttgatttttca 27587942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 39690568 - 39690488
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  39690568 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 39690488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 24781346 - 24781269
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||  ||||||| |||||||||||  |||||||||||| ||||||||||||||||| |||||||||||    
T  24781346 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttca 24781269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 3247354 - 3247273
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  3247354 agtgtaattaatatgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 3247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 4857570 - 4857493
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| ||||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  4857570 taattaatgtgtctattttatgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 4857493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 10523354 - 10523281
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||| ||| ||||||||||||| ||||    
T  10523354 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgttttttgtttttatgtgtattaaatttga 10523281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 12895288 - 12895211
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||  |||||||| |||||||||| |||||||  ||| ||||||||||||||||| |||||||||    
T  12895288 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttgtttgtatgtgtattaaatttgattttt 12895211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 25017750 - 25017673
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  25017750 taattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 25017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 35569085 - 35569004
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| ||| |||||||||| ||||| |||||| ||||||||||||||||| |||| |||||||    
T  35569085 agtgtaattaatgtgtctgttttatgtattaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcat 35569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 15898543 - 15898475
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  15898543 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtattaaa 15898475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 27642524 - 27642604
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||| | |||| ||||||||||||||||| |||| ||||    
T  27642524 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttgtttgtatgtgtattaaatttgactttt 27642604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 20946109 - 20946192
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||| ||||| |||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  20946109 ttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 20946192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 29866211 - 29866294
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||| ||||  ||||||||||||||||||| || |||| |||| ||||||||||||||||| |||| |||||||    
T  29866211 ttagtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttgtttgtatgtgtattaaatttgacttttcat 29866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 43060592 - 43060517
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||| |  ||| ||||||||||||||||| ||||    
T  43060592 ttagtgtaattaatgtgtctattttgtgtgttaatattaccatattatcttttgtttgtatgtgtattaaatttga 43060517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 30348150 - 30348076
Alignment:
Q  262 ttaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| |||||||||||||||||||| ||||| | |||| ||||| ||||||||||| |||| |||||||    
T  30348150 ttaatgtgtctattttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcat 30348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 600787 - 600867
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||| ||| |||||||||||||||  |||||||  ||| ||||||| ||||||||| |||||||||    
T  600787 ttagtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttgtttgtatatgtattaaatttgattttt 600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 4745149 - 4745229
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||  |||||||| ||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  4745149 ttagtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 4745229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 129634 - 129685
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttcttta 306  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  129634 agtgtaattaatgtgtctattttgtgtattaatattaccaaattgttcttta 129685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 11980738 - 11980821
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||||||||||||||||| | ||| | |  | ||| ||||||||||||| |||| |||||||    
T  11980738 ttagtgtaattaatgtgtctattttgtgtgttaatattactatattatccactgtttatatgtgtattaaatttgacttttcat 11980821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 21574962 - 21574880
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| |||||||||| ||||||| |||||||||||| ||||||| |||| |||||| |||||||||| |||  |||||||    
T  21574962 ttagtgtacttaatgtgtctattttgtatgttaatattaccaaattgtcctttgtttgta-gtgtattaaatttgtcttttcat 21574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 41521210 - 41521293
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||| |||| |||||||||||||||||||  |||||||  ||| ||| ||||||||||||| |||| |||||||    
T  41521210 ttagtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttgtttatatgtgtattaaatttgacttttcat 41521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 5151261 - 5151199
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| |||||||||| ||||||| |||||||||| ||||||||||| |||| |||||||    
T  5151261 ttttgtgtattaatattaccaaattgtcctttatttgtgtgtgtattaaatttgacttttcat 5151199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 40979273 - 40979211
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| |||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  40979273 ttttgtgtattaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 40979211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 4738654 - 4738735
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |   ||||||||||||||||||| ||||||  |||| ||| ||||||||||||| |||| |||||||    
T  4738654 agtgtaattaatgtatttgttttgtgtgttaatattactaaattgacctttgtttttatgtgtattaaatttgacttttcat 4738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 21912142 - 21912211
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaa 322  Q
    |||||||| |||||||||| ||||| |||||||||||||  |||||||  ||| ||||||||||||||||    
T  21912142 ttagtgtagttaatgtgtctattttatgtgttaatattattaaattgtcttttgtttgtatgtgtattaa 21912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 34877690 - 34877771
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  ||||||||||||||||||| ||||| |  ||| ||||| ||||||||||| |||| |||||||    
T  34877690 agtgtaattaatttgtctgttttgtgtgttaatattaccaaattatcatttgtttgtgtgtgtattaaatttgacttttcat 34877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 9375722 - 9375638
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| ||||||| | |  |||||||||| ||||||||| |||||||  ||| ||||||||| ||||||| ||||||||||||    
T  9375722 attagtgcaattaatatatttattttgtgtgctaatattaccaaattgtcttttgtttgtatgtttattaaatttgatttttcat 9375638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 16969396 - 16969476
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| ||||||||||||| | ||||| |||||||||||  ||| |||| ||||||||||||||| ||||| |||| ||||    
T  16969396 ttagtataattaatgtgtctaatttgtttgttaatattatcaaactgttatttatttgtatgtgtgttaaatttgaatttt 16969476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 38972208 - 38972129
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||| ||||    |||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  38972208 ttagtgtaattaatgtgtctatttaaa-tgttaatattaccaaattgtcctttgtttgtatgtgtattaaatttgactttt 38972129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 732014 - 731951
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttc-tttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||  ||||||||| ||| ||||||||||||||||| ||| ||||||||    
T  732014 ttttgtgtgttaatattatcaaattgttcttttgtttgtatgtgtattaaatttgttttttcat 731951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 43454004 - 43454086
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||| |||||||||||||  |||||| |||||||||||  ||| | |  ||| ||||||||||||||||| |||||||||||    
T  43454004 ttagtataattaatgtgtcagttttgtatgttaatattatcaaactatcttttgtttgtatgtgtattaaatttgatttttca 43454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 5845200 - 5845281
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |   |||||||| |||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  5845200 agtgtaattaatgtatttgttttgtgtattaatattatcaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 5845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 27798180 - 27798261
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  ||||||||||||||||||  ||||| |  ||| ||||||||||||||||  |||| |||||||    
T  27798180 agtgtaattaatttgtctgttttgtgtgttaatattatcaaattatcatttgtttgtatgtgtattaagtttgacttttcat 27798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 30317793 - 30317854
Alignment:
Q  275 tttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||| ||||| | |||| ||||| ||||||||||| |||| |||||||    
T  30317793 tttgtgtgttaatattaccaaattttcctttgtttgtgtgtgtattaaatttgacttttcat 30317854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 36347681 - 36347608
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||| ||  |||||||| |||||||||  |||||| | ||| ||||||||||||||||| ||||    
T  36347681 agtgtaattaatgtatctgttttgtgtattaatattatcaaattgatttttgtttgtatgtgtattaaatttga 36347608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 15967191 - 15967123
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaa 324  Q
    ||||||||||||||||  |||||||| |||||||||| |||||   |||||||| ||||| ||||||||    
T  15967191 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattaccctttatttatatgtttattaaaa 15967123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 291
Target Start/End: Original strand, 18729613 - 18729648
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatatta 291  Q
    |||||||||||||||| |||||||||||||||||||    
T  18729613 gtgtaattaatgtgtctattttgtgtgttaatatta 18729648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 19281569 - 19281498
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||| ||  |||||||| |||||||||| ||||| |  ||| ||||||||||||||||| ||||    
T  19281569 tgtaattaatgtatctgttttgtgtattaatattactaaattatcttttgtttgtatgtgtattaaatttga 19281498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 29874200 - 29874247
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgt 300  Q
    |||||||| ||||||| || |||||||||||||||||||| |||||||    
T  29874200 ttagtgtagttaatgtatctattttgtgtgttaatattaccaaattgt 29874247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 32067850 - 32067897
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgt 300  Q
    |||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  32067850 ttagtgcaattcatgtgtctattttgtgtgttaatattaccaaattgt 32067897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 33583855 - 33583914
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttt 332  Q
    |||||||||||||||||||| ||||| | ||||||||  | |||||||||| ||||||||    
T  33583855 attttgtgtgttaatattactaaattatcctttatttaaacgtgtattaaatttgatttt 33583914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 3529900 - 3529974
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatatt-acaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||| ||||||||||||| |||||||||   |||||| || |||||||||||| ||| ||||||||||||| ||||    
T  3529900 ttagtataattaatgtgtctattttgtgta--aatatttactaaattgttctttgtttatatgtgtattaaatttga 3529974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 31642548 - 31642484
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtatt 320  Q
    |||||||||||||||||  ||||||||||||||||||| ||| |||  ||| ||| ||||||||||    
T  31642548 agtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttgtttatatgtgtatt 31642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 7510627 - 7510667
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattac 292  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  7510627 attagtgtaattaatgtgtatgttttgtgtgttaatattac 7510667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 25690768 - 25690699
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatat---tacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||   ||||||||||||||||   |||||| |||| |||| |||||||||||||||||    
T  25690768 gtgtaattaatgtgtatgttttgtgtgttaatatagttacaaa-ttgtcctttgtttgtatgtgtattaaa 25690699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 1996 - 1913
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||| |||||||    
T  1996 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttttcat 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 3729414 - 3729481
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  3729414 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgtttgtatgtgtattaaa 3729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 1763837 - 1763917
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||||    
T  1763837 agtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgacttttca 1763917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 10669358 - 10669275
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||||||||  |||||| ||||||||| |||| |||||||    
T  10669358 ttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttgattgtatctgtattaaatttgacttttcat 10669275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 12514669 - 12514586
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  12514669 ttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 12514586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 19838953 - 19839033
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  19838953 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 19839033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 31945996 - 31945921
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||  ||| ||| ||||||||||||| ||||    
T  31945996 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttgtttatatgtgtattaaatttga 31945921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 11302877 - 11302959
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||| |||| |||| |||||||||||| |||| ||||||    
T  11302877 ttagtataattaatgtgtctgttttttgtgttaatattacaaaattgtcctttgtttgcatgtgtattaaatttgacttttca 11302959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 9461318 - 9461398
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||   |||| |||||||||||||| ||||| |||||| ||||||||||||||||| |||| |||||||    
T  9461318 gtgtaattaatgtgtttgttttatgtgttaatattactaaattattctttgtttgtatgtgtattaaatttgacttttcat 9461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 5895757 - 5895836
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  |||||||| |||||||||| ||||||| |||||||| ||||||||||||| || | |||||||    
T  5895757 tgtaattaatgtgtctgttttgtgtattaatattacgaaattgtcctttatttttatgtgtattaaatttaacttttcat 5895836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 22410927 - 22410852
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||||||||  |||| | |||||||||||| |||||||  ||||||||||||||||||||| ||||    
T  22410927 ttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtcttttatttgtatgtgtattaaatttga 22410852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 31153066 - 31152989
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| ||||| | ||| |||||||| |||||||| ||| ||||||||||||||||| |||| |||||||    
T  31153066 taattaatgtgtctattttatatgtcaatattactaaattgttatttgtttgtatgtgtattaaatttgacttttcat 31152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 34513292 - 34513219
Alignment:
Q  263 taatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||  ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||| |||||||    
T  34513292 taatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcat 34513219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 16327151 - 16327228
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  ||||||||||||||||||| |||||||  ||| ||||||| ||||||||| || | |||||||    
T  16327151 taattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcat 16327228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 16350545 - 16350626
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |||  ||||||||||||||||||| |||||||  ||| ||||||| ||||||||| || | |||||||    
T  16350545 agtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttgtttgtatttgtattaaatttaacttttcat 16350626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 15981819 - 15981899
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||  ||  ||||||||||| ||||| || | |||||||    
T  15981819 gtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcattagtttgtatgtgtcttaaatttaacttttcat 15981899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 30466049 - 30465969
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| |||   ||||||||||||||||||| ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  30466049 gtgtaattaatatgtttgttttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcat 30465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 33607384 - 33607460
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||| ||||||||||||||  ||||| | |||| ||||||||||| ||||| |||| |||||||    
T  33607384 aattaatgtgtctatttagtgtgttaatattatcaaattatcctttgtttgtatgtgtgttaaatttgacttttcat 33607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 20522994 - 20523077
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||| ||  | ||||||||| |||||||| ||||| ||  || ||||||||||||||||| ||||||||||||    
T  20522994 ttagtgcaattaatgagtttagtttgtgtgtcaatattaccaaattatttcttgtttgtatgtgtattaaatttgatttttcat 20523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 31780153 - 31780216
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||| ||||||| |||| ||||||| ||||||| |||| ||||| |||||||||||    
T  31780153 aattaatgtgtctattttgtatgttgatattactaaattgtcctttgtttgtttgtgtattaaa 31780216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 6791404 - 6791478
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||   ||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| ||||    
T  6791404 tgtaattaatgtgtg--ttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtattaaatttgactttt 6791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 28238398 - 28238318
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| ||||||||||||| |||||||||||||||||||| | ||| | | || ||| ||||| ||||||| |||| ||||    
T  28238398 ttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttt 28238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 3888017 - 3887947
Alignment:
Q  262 ttaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||| ||||||||||||||||||||||| ||||  | | |||  |||||||||||| |||||||||    
T  3888017 ttaatgtgtctattttgtgtgttaatattacaaa-ttgtcttatgtttacatgtgtattaaatttgattttt 3887947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 4250740 - 4250689
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttcttta 306  Q
    |||||||||||||||||  ||||||||||||||||||| || |||| |||||    
T  4250740 agtgtaattaatgtgtctgttttgtgtgttaatattacgaagttgtccttta 4250689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 12514832 - 12514769
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||| ||||||| |||||||||||| ||||| |  ||| ||| |||||||||||||    
T  12514832 aattaatgtgtccattttgtatgttaatattaccaaattatcatttgtttatatgtgtattaaa 12514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 197529 - 197455
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||   |||||||||| |||||||  |||||||  ||| ||||||||||||||||| || ||||||    
T  197529 taattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttgtttgtatgtgtattaaatttaattttt 197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 5084600 - 5084555
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtat 319  Q
    ||||||||||||||||||  ||||||| |||| |||||||||||||    
T  5084600 ttttgtgtgttaatattatcaaattgtcctttgtttgtatgtgtat 5084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 16186594 - 16186675
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||||  |||||| ||||||| |||| ||||||| | || ||||||  ||||||||| |||| |||||||    
T  16186594 attagtgtaattaatgtgtctgttttgtatgttaat-ttacgaaattgtcccttgtttgta--tgtattaaatttgacttttcat 16186675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 27297599 - 27297682
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||||| |||| |||||||    
T  27297599 ttagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcat 27297682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 3237744 - 3237828
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||||| |||| |||||||    
T  3237744 attaatgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttgtttgtatgtgtattaaatttgacttttcat 3237828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 24774886 - 24774970
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  24774886 attagtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 24774970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 37355061 - 37355141
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  37355061 gtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 37355141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 247682 - 247765
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||  |||| ||||||||| ||||||| |||| |||||||    
T  247682 ttagtgtaattaatgtgtctattttgtgtgttaatattataaaattgccctttgtttgtatgtatattaaatttgacttttcat 247765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 17251044 - 17250961
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| |||||||||||||  |||||||||||||||||||||||||||  ||| |||||||||||||| ||||||| |||||||    
T  17251044 ttagtataattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttgtttgtatgtgtatttaaattgacttttcat 17250961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 44424617 - 44424700
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  44424617 ttagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 44424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 8065153 - 8065072
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| | |||| ||||||||||||||||  ||||||||||||    
T  8065153 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaactttgatttttcat 8065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 31644519 - 31644442
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  |||| ||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||    
T  31644519 taattaatgtgtctgttttttgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 31644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 43650058 - 43650131
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||||||  |||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  43650058 agtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttgtttgtatgtgtattaaatttga 43650131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 375425 - 375345
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| ||||||||||||| |||||  |||||||  ||| ||||||||||||||||| ||||||||||||    
T  375425 gtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 375345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 9718253 - 9718185
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  9718253 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattattctttgtttgtatgtgtattaaa 9718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 17663646 - 17663726
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||| | ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  17663646 ttagtgtaattaatgtgcctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 17663726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 40346157 - 40346081
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||  |||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| |||||||    
T  40346157 aattaatgtgttcattttgtgtgttaatattactaaattgtcttttatttgtatgtgtattaaatttgacttttcat 40346081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 4033602 - 4033673
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||| ||  |||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  4033602 attagtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttgtttgtatgtgtattaaa 4033673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 256 - 335
Target Start/End: Original strand, 11459178 - 11459257
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||| |||||||||  ||||||||||||||||||| ||||||| |||| ||||||| ||||||||| |||||||||||    
T  11459178 gtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttgtttgtatatgtattaaatttgatttttca 11459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 44101395 - 44101474
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| |||||||||||  ||||||||| |||||||||| ||||| |||||||||| ||||||||||||| |||||||||    
T  44101395 tagtgcaattaatgtgtttattttgtgttttaatattactaaattattctttatttatatgtgtattaaatttgattttt 44101474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 14420699 - 14420768
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaa 322  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||| |||| |||| |||||||||||    
T  14420699 ttagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgcatgtgtattaa 14420768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 26512093 - 26512173
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| ||||||||||||  ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  26512093 ttagtataattaatgtgtttattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 26512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 45150812 - 45150736
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||  ||||||||||||||||||||  |||||| |||| ||||||||||||||||| |||| |||||||    
T  45150812 aattaatgtgttcattttgtgtgttaatattactcaattgtcctttgtttgtatgtgtattaaatttgacttttcat 45150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 11071690 - 11071773
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| | ||| |||||||||||||| ||||||| ||||  |||||||||||||||| |||| |||||||    
T  11071690 ttagtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgcttgtatgtgtattaaatttgacttttcat 11071773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 12417681 - 12417618
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| |||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||    
T  12417681 attttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttcat 12417618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 12429741 - 12429678
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| |||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||    
T  12429741 attttttgtgttaatattaacaaattgttttttatttgtatgtgtattaaatttgatttttcat 12429678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 14527645 - 14527728
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||||||||||||| ||||||||||||||||||||  |||| |  ||| ||||||||| ||||||| ||||||||||||    
T  14527645 ttagggtaattaatgtgtctattttgtgtgttaatattaccgaattatcatttgtttgtatgtatattaaatttgatttttcat 14527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 34330024 - 34330107
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| ||||||||||  |  ||||||||||||||||||||||||||| |||| ||||||||||||||||| || | |||||||    
T  34330024 ttagtataattaatgtacctgttttgtgtgttaatattacaaaattgtcctttgtttgtatgtgtattaaatttaacttttcat 34330107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 315
Target Start/End: Complemental strand, 4398607 - 4398545
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||  ||| |||||||||    
T  4398607 ttagtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttgtttgtatgt 4398545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 20362005 - 20362071
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtat 319  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| |||||||||||||    
T  20362005 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtat 20362071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 15851555 - 15851636
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| |||||||||||||  ||||||| |||| ||| ||||||||||||| |||| |||||||    
T  15851555 agtgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcctttgtttatatgtgtattaaatttgaattttcat 15851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 23464711 - 23464788
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |||||||| || |||||||  ||||||| |||||||||||| ||||||||| |||| |||||||    
T  23464711 taattaatgtgtctattttgtgcgtaaatattatcaaattgtcctttatttgtatatgtattaaatttgacttttcat 23464788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 41665734 - 41665815
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||| ||  ||||||| |||| ||||||||||||||||| || | |||||||    
T  41665734 agtgtaattaatgtgtctgttttgtgtgttaatagtatcaaattgtcctttgtttgtatgtgtattaaatttaacttttcat 41665815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 43709941 - 43710014
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaatt 326  Q
    |||||| |||||||| ||| ||||||||||||||||||||  |||||| |||| ||| ||||||||||||||||    
T  43709941 ttagtgcaattaatgcgtctattttgtgtgttaatattacttaattgtcctttgtttatatgtgtattaaaatt 43710014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 43638893 - 43638821
Alignment:
Q  264 aatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||  |||||| ||||||||||||||||||| |  ||||||| ||||||||||||| ||||||||||||    
T  43638893 aatgtgtttattttgcgtgttaatattacaaaattatcatttatttatatgtgtattaaatttgatttttcat 43638821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 1246475 - 1246416
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||| |||| ||||    
T  1246475 ttttgtgtgttaatattatgaaattgttctttgtttgtatgtgtattaaatttgactttt 1246416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 13477116 - 13477033
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||| |||  ||||| |||||||||||||| | ||||| |||||||||||||  ||||||| ||||||||||||    
T  13477116 ttagtgcaattaatatgtttattttatgtgttaatattactagattgtcctttatttgtatgcatattaaatttgatttttcat 13477033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 35453817 - 35453754
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    |||||||||||||||||||| ||||| | |||||||||||| |||||||||||| ||| |||||    
T  35453817 attagtgtaattaatgtgtctattttatatgttaatattactaaattgttctttgtttttatgt 35453754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 38982146 - 38982071
Alignment:
Q  261 attaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| ||  ||||||||||||||||||| ||||| || ||| ||||||||||||||||| |||| |||||||    
T  38982146 attaatgtatctgttttgtgtgttaatattaccaaattattttttgtttgtatgtgtattaaatttgacttttcat 38982071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 44421473 - 44421551
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||| ||  |||||| |||||||||||| |||||||  ||| ||||||||||||||||| ||| |||||    
T  44421473 agtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgtttttt 44421551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Original strand, 4758054 - 4758123
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||  |||||||||||||||||||  ||||||| |||| ||| ||||||||||||| ||||    
T  4758054 taattaatgtgtttattttgtgtgttaatattatgaaattgtcctttgtttttatgtgtattaaatttga 4758123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 16808904 - 16808823
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||||||||||  ||||| ||| |||||||||| |||||||  ||| ||||||||| |||||||||| |||||||||    
T  16808904 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16808823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 16848185 - 16848104
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||||||||||  ||||| ||| |||||||||| |||||||  ||| ||||||||| |||||||||| |||||||||    
T  16848185 agtgcaattaatgtgtatattttatgtattaatattactaaattgtcatttgtttgtatgtatattaaaattaatttttcat 16848104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 35178874 - 35178793
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||   ||||||||| ||||||||| |||||||  ||||||||||| ||||||||| |||| |||||||    
T  35178874 agtgtagttaatgtgtatgttttgtgtgataatattacgaaattgtcttttatttgtatttgtattaaatttgacttttcat 35178793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 45214749 - 45214830
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||||||||||||||||   ||||||  |||| ||||||||||||||||| || | |||||||    
T  45214749 agtgtaattaatgtgtctgttttgtgtgttaatattttcaaattgccctttgtttgtatgtgtattaaatttaacttttcat 45214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 7255626 - 7255706
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||||| |||||||||| ||||| | ||||  |||| ||||||||||| |||| |||||||    
T  7255626 gtgtaattaatgtgtctgttttgtgtattaatattaccaaattatcctttgattgtttgtgtattaaatttgacttttcat 7255706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 8393229 - 8393313
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||| |||||||||   ||||||||||||||||||  ||||| |||||| ||||||||||| ||||| ||| ||||||||    
T  8393229 attaatgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcat 8393313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 15578165 - 15578081
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||| |||||||||   ||||||||||||||||||  ||||| |||||||||||||||||| ||||| ||  ||||||||    
T  15578165 attaatgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttatttgtatgtgttttaaatttattttttcat 15578081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 36846776 - 36846860
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||| |||||||||   ||||||||||||||||||  ||||| |||||| ||||||||||| ||||| ||| ||||||||    
T  36846776 attaatgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcat 36846860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 44462665 - 44462581
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||| |||| |||||||||   ||||||||||||||||||  ||||| |||||| ||||||||||| ||||| ||| ||||||||    
T  44462665 attaatgtagttaatgtgtttgttttgtgtgttaatattatcaaatttttctttgtttgtatgtgttttaaatttgttttttcat 44462581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 2131779 - 2131862
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||  |||| |||||||||||||||||||| ||||| |  ||| ||||||| ||||||||| |||| |||||||    
T  2131779 ttagtgcaattaacatgtctattttgtgtgttaatattaccaaattatcttttgtttgtatctgtattaaatttgacttttcat 2131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 38449793 - 38449714
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  |||||||| |||||||||  ||||| |  ||| ||||||||||||||||| |||||| |||||    
T  38449793 tgtaattaatgtgtctgttttgtgtattaatattatcaaattatcatttgtttgtatgtgtattaaatttgattattcat 38449714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 43119424 - 43119369
Alignment:
Q  281 tgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||  ||| ||||||||||||||||| ||||||||||||    
T  43119424 tgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 43119369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 2521381 - 2521303
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||| ||||| |||| ||||||||  |||||||  ||| ||||||||||||||||| |||| ||||    
T  2521381 agtgtagttaatgtgtctattttatgtggtaatattattaaattgtcttttgtttgtatgtgtattaaatttgactttt 2521303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 41865744 - 41865817
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||| |||||||||||||| ||||| |||||  || || ||||||||||||||||| |||| ||||    
T  41865744 taattaatgtgtctattttgtgtgttaacattaccaaatt-atccttgtttgtatgtgtattaaatttgactttt 41865817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 28265032 - 28264959
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||   ||||||| ||||||||||| |||||||  ||| ||||||||| ||||||| ||||    
T  28265032 agtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttgtttgtatgtatattaaatttga 28264959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 42250958 - 42250882
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||||||| ||||||||| ||||| ||   |||||||  ||||||| ||||||||||||| |||| ||||    
T  42250958 tagtgtaattaatgtgtctattttgtgttttaatgtt---aaattgtcatttatttatatgtgtattaaatttgactttt 42250882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 6597882 - 6597957
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||| |||| |||||||||||||| ||||| ||| | | |||| ||||||||||||||||| |||| ||||    
T  6597882 tgtaattaatatgtctattttgtgtgttaacattaccaaaatatccttt-tttgtatgtgtattaaatttgaatttt 6597957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 21012875 - 21012955
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||  |||||||||||||||||||  ||||| | |||| ||||||||  ||||||| |||| ||||    
T  21012875 ttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttgtttgtatgcatattaaatttgactttt 21012955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 25731619 - 25731698
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||| || || ||||||||| ||||||  || ||||| ||||||| |||||||||| ||||| |||||||||    
T  25731619 ttagtgtaattaaagtatctattttgtgtattaataaaactaaatttttcttta-ttgtatgtgtgttaaatttgattttt 25731698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 8384055 - 8384008
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgt 300  Q
    |||||| |||||||||||  |||||||||||||||||||| |||||||    
T  8384055 ttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgt 8384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 28190620 - 28190703
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| |||||||| |||  ||||| |||||||||||||| |||||||  ||| ||||||| ||||||||  || |||||||||    
T  28190620 ttagtataattaatatgtttattttttgtgttaatattaccaaattgtcatttgtttgtatatgtattaagtttaatttttcat 28190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 6275650 - 6275581
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||| |||||||||||| |||||||||||||| ||||  |||||||  ||| ||||||| |||||||||    
T  6275650 ttagtgcaattaatgtgtctattttgtgtgttaa-attatgaaattgtcttttgtttgtatatgtattaaa 6275581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 12121904 - 12121970
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtat 319  Q
    |||||||||||||| |||| ||||| | ||| |||||||  |||||||| |||| ||||||||||||    
T  12121904 ttagtgtaattaatatgtctattttatatgtgaatattattaaattgttttttacttgtatgtgtat 12121970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 25731247 - 25731186
Alignment:
Q  275 tttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||| |  ||| ||||||||| ||||||| ||||||||||||    
T  25731247 tttgtgtgttaatattatcaaattatcttttgtttgtatgtatattaaatttgatttttcat 25731186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 44274746 - 44274685
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgta 318  Q
    |||||||||||||||  |||| |||||||||||| | |||||||  ||| ||||||||||||    
T  44274746 tgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttgtttgtatgtgta 44274685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 3326749 - 3326829
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||| | |||||||||  ||||||| |||| ||| ||||||||| ||| || | |||||||    
T  3326749 gtgtaattaatgtgtctgttttgtatattaatattattaaattgtcctttgtttatatgtgtataaaatttaacttttcat 3326829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 20262475 - 20262394
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||||||    
T  20262475 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttatttgtttgtatgtgtattaaatttgacttttcat 20262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 25477249 - 25477330
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||    
T  25477249 agtgtaattaatgtgtctgttttatgtgttaatattacaaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 25477330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 30153303 - 30153222
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||| ||||||||| ||||| | |||||||||||||||||||||| |||| |||||||    
T  30153303 agtgtaattaatgtgtctgttttgtgtgataatattaccaaattatcctttatttgtatgtgtattaaatttgacttttcat 30153222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 46729329 - 46729410
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| || | ||||||||||||||||| |||| |||||||    
T  46729329 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctatgtttgtatgtgtattaaatttgacttttcat 46729410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 12624718 - 12624798
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||| | ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  12624718 ttagtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 29584916 - 29584996
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  29584916 ttagtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 29584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 37175102 - 37175022
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| |||||||||||||||||||| |||||||  ||| ||||||||||||||||| | || |||||||    
T  37175102 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgtattaaattagacttttcat 37175022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 38136377 - 38136460
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||  ||| |||||||||||| | || ||||||||||||    
T  38136377 ttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtaattaatttgatttttcat 38136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 39237670 - 39237592
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||| ||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  39237670 agtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgactttt 39237592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 48472576 - 48472498
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| | |||| ||||||||||||| ||| |||| ||||    
T  48472576 agtgtaattaatgtgtctattttgtgtgttaatattacgaaattatcctttctttgtatgtgtatgaaatttgactttt 48472498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 5448690 - 5448767
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  ||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||| |||||||    
T  5448690 taattaatgtgtctgttttgtgtgttaatattacgaaattatcctttgtttgtatgtgtattaaatttgacttttcat 5448767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 43800832 - 43800913
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| |||||  ||||||||||||||||||| ||||||| |||| |||||||||||||| || |||| |||||||    
T  43800832 agtgtaattaaggtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtatgtgtatttaatttgacttttcat 43800913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 52768972 - 52768907
Alignment:
Q  263 taatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||    
T  52768972 taatgtgtctattttgtgtgtgaatattacaaaattgtcatttatttgtatgtgtattaaatttga 52768907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 54438538 - 54438615
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||  ||||||||||||||||||| ||||| | |||||||||||||||||||||| |||| |||||||    
T  54438538 taattaaagtgtctgttttgtgtgttaatattacgaaattatcctttatttgtatgtgtattaaatttgacttttcat 54438615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 14602738 - 14602658
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||| | ||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  14602738 ttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 14602658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 31486510 - 31486590
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||| | |||| ||| |||| |||||||| |||||||||    
T  31486510 ttagtgcaattaatgtgtctattttgtgtgttaatattactaaattatcctttgtttatatgcgtattaaatttgattttt 31486590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 34543727 - 34543807
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| |||||||||||||||||||| ||||  | |||| ||||||||||||||||  |||| |||||||    
T  34543727 gtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttgtttgtatgtgtattaattttgacttttcat 34543807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 20291366 - 20291445
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||| |||||||| ||||||||||| ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  20291366 tgtaattaatgtgtctattttgtgggttaatattactaaattatcatttgtttgtatgtgtattaaatttgacttttcat 20291445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 28116588 - 28116505
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| |||| |||||||||||||||||| | ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  28116588 ttagtgtaattaatatgtctattttgtgtgttaatattgccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 28116505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 33246580 - 33246505
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||  |||| |||||||||||||||||||| ||||| | |||| ||||||||||||||||| ||||    
T  33246580 ttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttgtttgtatgtgtattaaatttga 33246505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 41459617 - 41459692
Alignment:
Q  261 attaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |||||| ||||||||||| |||||||  ||||||| ||||||||||||| |||| |||||||    
T  41459617 attaatgtgtcgagtttgtgcgttaatattactaaattgtcttttatttatatgtgtattaaatttgacttttcat 41459692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 50782802 - 50782869
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaa 322  Q
    |||||||||||||||||  |||||||| |||||||||| ||||||| |||| ||||||||||||||||    
T  50782802 agtgtaattaatgtgtctgttttgtgtcttaatattacgaaattgtcctttgtttgtatgtgtattaa 50782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 56373427 - 56373344
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||  |||||||||||||||||||| |||||||  ||| ||||| ||||||||||| ||| ||||||||    
T  56373427 ttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttgtttgtctgtgtattaaatttgttttttcat 56373344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 19654450 - 19654520
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||||| ||||| |||||| ||||||| ||||| |  |||||||||||||||||||||    
T  19654450 ttagtgtaattaatgtgtctattttatgtgttgatattaccaaattatcatttatttgtatgtgtattaaa 19654520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 20791950 - 20792032
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| ||||||| |||| ||||||||||||||||||||| |||| |  ||||||||||| ||||||||| |||| |||||||    
T  20791950 tagtgcaattaatatgtctattttgtgtgttaatattacataattatcttttatttgtatatgtattaaatttgagttttcat 20792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 5536521 - 5536602
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||| ||||||||| ||| ||||| |  ||| ||||||||||||||||| ||||||||||||    
T  5536521 agtgtaattaatgtgtctgttttgcgtgttaatactacgaaattttcatttgtttgtatgtgtattaaatttgatttttcat 5536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 32236855 - 32236936
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| ||||  ||||||||||||||||||  ||||| |||||| ||| ||||||||||||| |||| |||||||    
T  32236855 agtgtaattaatatgtctgttttgtgtgttaatattatcaaattattctttgtttatatgtgtattaaatttgacttttcat 32236936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 5168004 - 5168084
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| ||||  ||||||| ||||||||||| |||||||  ||| ||||||||||||||||| || |||||||||    
T  5168004 gtgtaattaatatgtctgttttgtgcgttaatattactaaattgtcatttgtttgtatgtgtattaaatttaatttttcat 5168084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 22651485 - 22651561
Alignment:
Q  252 attagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||| ||||||||||||||  ||||||| |||||||||||| |||||||  ||| ||||||||||||||||| ||||    
T  22651485 attaatgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttgtttgtatgtgtattaaatttga 22651561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 22750922 - 22750842
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| ||  |||||||| |||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  22750922 gtgtaattaatgtatctgttttgtgtattaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 22750842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 51787796 - 51787876
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  ||||||||||||||||||| |||| |   ||| ||||||||||||||||| |||| |||||||    
T  51787796 gtgtaattaatgtgtctgttttgtgtgttaatattacgaaatagacatttgtttgtatgtgtattaaatttgacttttcat 51787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 45628157 - 45628075
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||| |||||||  |||||||| |||||||||| ||||||  |||||||| ||||||||||||| |||| |||||||    
T  45628157 ttagtgtaattgatgtgtctgttttgtgtattaatattaccaaattgccctttattt-tatgtgtattaaatttgacttttcat 45628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 5416942 - 5416872
Alignment:
Q  263 taatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||| ||||||| |||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  5416942 taatgtgtctattttgtttgttaatattaccaaattgtgttttgtttgtatgtgtattaaatttgactttt 5416872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 20116493 - 20116555
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||  |||||||  ||| ||||||||||||||||| ||||||||||||    
T  20116493 ttttgtgtgttaatattaggaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 20116555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 16070455 - 16070536
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||| |  ||| ||| ||| ||||||||| |||| |||||||    
T  16070455 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattatcttttgtttatatatgtattaaatttgacttttcat 16070536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 26203156 - 26203233
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttc 334  Q
    |||||||||||| |  ||||| ||||||||||||||||||||||  ||| ||||||||| ||||||| |||| |||||    
T  26203156 tgtaattaatgtatatattttatgtgttaatattacaaaattgtcttttctttgtatgtatattaaatttgacttttc 26203233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 37625202 - 37625125
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||  |||||||||||||||||||| ||||| |  ||| ||| ||||||||||||| |||| |||||||    
T  37625202 taattaatgtgtttattttgtgtgttaatattactaaattatcatttgtttatatgtgtattaaatttgacttttcat 37625125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 41945853 - 41945773
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| | |||| |||| ||||||||| ||||||| |||| ||||||| ||||||||| |||| |||||||    
T  41945853 agtgtaattaatgtgttg-ttttatgtgataatattacgaaattgtcctttgtttgtatatgtattaaatttgacttttcat 41945773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 7002212 - 7002288
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||| |  ||||| |||||||||||||| ||||| | |||| ||||||||||| ||||| ||||||||||||    
T  7002212 aattaatgtttatattttatgtgttaatattaccaaattatcctttgtttgtatgtgtgttaaatttgatttttcat 7002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 336
Target Start/End: Complemental strand, 10602288 - 10602210
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||| |||   ||||| ||||||||||| |||| |||||||    
T  10602288 tagtgtaattaatttgtctattttgtgtgttaatattactaaattg-tct---tttgtttgtgtattaaatttgacttttcat 10602210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 44812687 - 44812607
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| |   |||| | ||||||||||||||||||||  ||||||||| ||||||||||| |||| |||||||    
T  44812687 gtgtaattaatgtatttgttttatatgttaatattacaaaattgtcatttatttgtgtgtgtattaaatttgacttttcat 44812607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 51918739 - 51918675
Alignment:
Q  249 aaaattagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtat 313  Q
    ||||||| || |||||||||||| ||||||||||||| |||||| ||||| |||||| |||||||    
T  51918739 aaaattaatgcaattaatgtgtctattttgtgtgttagtattaccaaattattctttgtttgtat 51918675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 52676048 - 52676124
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||| |||| ||||| ||| |||||||||  ||||||| |||||||| ||||||||||||| |||| ||||||    
T  52676048 taattaatatgtctattttttgtattaatattattaaattgtcctttatttatatgtgtattaaatttgacttttca 52676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 13096625 - 13096542
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  | ||||||||||||||||| |||||||  ||| ||| |||||| || |||||| | |||||||    
T  13096625 ttagtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttctatgtgcataaaaattaacttttcat 13096542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 20185739 - 20185656
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||    ||||||||||||||||||| ||||||   ||| ||||||| ||||||||| |||| |||||||    
T  20185739 ttagtgtaattaatgtgcaagttttgtgtgttaatattaccaaattgccttttgtttgtatttgtattaaatttgacttttcat 20185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 31840120 - 31840188
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||| |   ||||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  31840120 ttagtgtaattaatgtatt--ttttgtgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaa 31840188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 31937471 - 31937392
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||||||||||  |||||||  ||| ||||||||| ||| ||| |||| |||||||    
T  31937471 tgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttgtttgtatgtatataaaatttgacttttcat 31937392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 41920121 - 41920038
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| ||||||| | || |||||||||||||||||||| |||||||  ||| |||||||||| | |||| |||| |||||||    
T  41920121 ttagtgcaattaatatttctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgaaataaatttgacttttcat 41920038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 43509107 - 43509173
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||| | ||||||||||||||||||  |||||||  ||| |||||||||||||||||    
T  43509107 gtgtaattaatgtgttg-ttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaa 43509173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 3094209 - 3094251
Alignment:
Q  258 gtaattaatgtgtcgattttgtgtgttaatattacaaaattgt 300  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  3094209 gtaattaatgtgtctattttgtgtgttaatattaccaaattgt 3094251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 5932910 - 5932988
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||   ||||||||||||||||||  |||||||  ||| ||| ||||||||||||| || ||||||    
T  5932910 agtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttgtttttatgtgtattaaatttaattttt 5932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 36513367 - 36513310
Alignment:
Q  279 tgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  |||||||| ||| ||||||| ||||||||| ||||||||||||    
T  36513367 tgtgttaatattatcaaattgttttttgtttgtatatgtattaaatttgatttttcat 36513310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 39197096 - 39197035
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| ||||||    
T  39197096 ttttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttca 39197035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 336
Target Start/End: Original strand, 52226047 - 52226124
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||  |||| | |||||||||||  ||||||| |||| ||| ||||||||||||| |||| |||||||    
T  52226047 taattaatgtgtctgttttatatgttaatattatcaaattgtcctttgtttatatgtgtattaaatttgacttttcat 52226124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 26186818 - 26186758
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| ||||    
T  26186818 attttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaatttgactttt 26186758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 31552190 - 31552242
Alignment:
Q  281 tgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||| |||||||  ||||||| ||||||||||||| |||||||||    
T  31552190 tgttaatattactaaattgtcatttatttatatgtgtattaaatttgattttt 31552242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 24072793 - 24072872
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  |||| |||||||||||||  |||||||  |||  ||| |||||||||||| |||| |||||||    
T  24072793 tgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcatttgcttgaatgtgtattaaatttgacttttcat 24072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 34643437 - 34643499
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||||||||  ||||||| |||| ||||||||||||||||| || |||||||||    
T  34643437 attttgtatgttaatattaataaattgt-ctttgtttgtatgtgtattaaatttaatttttcat 34643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 40411406 - 40411343
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  |||||||  ||| ||||||||||||||||| || | |||||||    
T  40411406 attttgtgtgttaatattatgaaattgtcatttgtttgtatgtgtattaaatttaacttttcat 40411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 32107888 - 32107950
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| |||||||||  |||||||  ||||||||||| ||||||||| |||| |||||||    
T  32107888 ttttgtgtattaatattatcaaattgtcttttatttgtatatgtattaaatttgacttttcat 32107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 52198809 - 52198731
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||| ||||  || ||||| |||||||||| ||||| |  |||||||||||||||||| || |||| ||||    
T  52198809 agtgtaattaatatgtctgttctgtgtattaatattaccaaattatcttttatttgtatgtgtattgaatttgactttt 52198731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 16582556 - 16582637
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||  ||||||||||||||||||||| |||| |||||||    
T  16582556 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttatttgtatgtgtattaaatttgacttttcat 16582637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 48721948 - 48721867
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  48721948 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 48721867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 29140733 - 29140653
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||  |||||||| |||||||||||||||||| |||| ||||||||||||||||| |||| |||||||    
T  29140733 gtgtaattaatgtgtctgttttgtgtattaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 29140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 32152186 - 32152262
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||||||    
T  32152186 aattaatgtgtctattttgtgtgttaatattaccaaattgttatttgtttgtatgtgtattaaatttgacttttcat 32152262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 8984743 - 8984660
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  8984743 ttagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 8984660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 28723735 - 28723652
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  28723735 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgtatgtgtattaaatttgacttttcat 28723652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 44652943 - 44652860
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||||  |||||||| |||||||||| | |||||||||| ||||||||||||||||| |||| |||||||    
T  44652943 ttagtgtaattaatgtgtctgttttgtgttttaatattaccacattgttctttgtttgtatgtgtattaaatttgacttttcat 44652860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 47071043 - 47070960
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||||  ||| |||||||| |||||||| ||||||||||||    
T  47071043 ttagtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcatttgtttgtatgcgtattaaatttgatttttcat 47070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 5085169 - 5085088
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  5085169 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 5085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 33231863 - 33231944
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| |||||||||||||||||  ||| |||||||    
T  33231863 agtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtcctttgtttgtatgtgtattaaatctgacttttcat 33231944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 4813537 - 4813461
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||| ||||| |||| |||||||    
T  4813537 aattaatgtgtctattttgtgtgttaatattaccaaattattctttgtttgtatgtgtgttaaatttgacttttcat 4813461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 15512863 - 15512783
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  15512863 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 15512783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 28949046 - 28948966
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||| |||||||||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||||| |||| ||||    
T  28949046 ttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttgtttgtatgtgtattaaatttgactttt 28948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 31305342 - 31305422
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| ||||||| || ||||||||| ||||||| |||| ||||||||||||||||| |||| |||||||    
T  31305342 gtgtaattaatgtgtctattttgtatgctaatattaccaaattgtcctttgtttgtatgtgtattaaatttgacttttcat 31305422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 46495332 - 46495412
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||||||||  ||||||||||||||||||  ||||||| |||||||||||||| ||||||| |||| ||||||    
T  46495332 agtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttatttgtatgtatattaaatttgacttttca 46495412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 5322101 - 5322022
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||| ||| ||||||| |||||||||||||| |||||||    
T  5322101 tgtaattaatgtgtctgttttgtgtgtttatattacgaaattgttatttgtttgtatatgtattaaaattgacttttcat 5322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 13723560 - 13723477
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||||||| |||||||||| ||||| | |||| ||||||||||||||||| |||| |||||||    
T  13723560 ttagtgcaattaatgtgtctattttgtgtattaatattaccaaattatcctttgtttgtatgtgtattaaatttgacttttcat 13723477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 15179433 - 15179512
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttc 334  Q
    ||||||||||||||||| ||||| || || |||||||||||||||| |||| ||||||||||||||||| |||| |||||    
T  15179433 agtgtaattaatgtgtctattttatgcgtaaatattacaaaattgtcctttgtttgtatgtgtattaaatttgacttttc 15179512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 47754724 - 47754641
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  47754724 ttagtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 47754641  T

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Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 38680496 - 38680566
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||  ||| |||||||||||||||||    
T  38680496 ttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttgtttgtatgtgtattaaa 38680566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 9675747 - 9675674
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||| ||||   |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  9675747 agtgtaattaatttgtctgatttgtgtgttaatattacgaaattgtcctttatttgtatgtgtattaaatttga 9675674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 333
Target Start/End: Complemental strand, 28679896 - 28679824
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||||| |||||||||||||||||||  |||||||| ||| ||||||||||||||||| |||||||||    
T  28679896 aattaatgtgtctattttgtgtgttaatattattaaattgtt-tttgtttgtatgtgtattaaatttgattttt 28679824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 44395558 - 44395639
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||  ||||| |||||||||||||||||||| | |||| ||||||||| ||||||| ||||||||||||    
T  44395558 agtgtaattaatatgtttattttatgtgttaatattacaaaattatcctttgtttgtatgtatattaaatttgatttttcat 44395639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 30336083 - 30336163
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||| ||| |||| |||| ||| |||| |||||||    
T  30336083 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgtttctatgcgtataaaatttgaattttcat 30336163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 2342925 - 2343008
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||| || |||||||||| |||||||||||||||||||| |||||||  ||| ||||| ||||||||||| |||| |||||||    
T  2342925 ttagtttacttaatgtgtctattttgtgtgttaatattaccaaattgtcttttgtttgtgtgtgtattaaatttgacttttcat 2343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 3143428 - 3143507
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||   ||||||||||||||||||||||||||  ||| ||| ||||||||||||| |||| |||||||    
T  3143428 tgtaattaatgtgtctgctttgtgtgttaatattacaaaattgtcttttgtttttatgtgtattaaatttgacttttcat 3143507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 34102361 - 34102440
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||||||||||  ||||| |||||| ||||||||| ||||||| |||| |||||||    
T  34102361 tgtaattaatgtgtctgttttgtgtgttaatattatcaaattattctttgtttgtatgtttattaaatttgacttttcat 34102440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 35366066 - 35365983
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||| |||||| || |||||||||||||||||||  |||||||  ||| ||||||||||||||||| |||| |||||||    
T  35366066 ttagtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttcat 35365983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 20564797 - 20564879
Alignment:
Q  254 tagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||  ||| |||| |||||||||||| |||| |||||||    
T  20564797 tagtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttgtttgaatgtgtattaaatttgacttttcat 20564879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 25269400 - 25269481
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||||||  |||| |||||||||||||| ||||| | |||| ||||||||||||||||| |||| |||||||    
T  25269400 agtgtaaataatgtgtctgttttatgtgttaatattacgaaattttcctttgtttgtatgtgtattaaatttgacttttcat 25269481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 36084993 - 36085074
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||| ||  ||||||||||||||||||  ||||| | |||||||||||||||||||||| || | |||||||    
T  36084993 agtgtaattaatgtatctgttttgtgtgttaatattaagaaattatcctttatttgtatgtgtattaaatttaacttttcat 36085074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 24415024 - 24415104
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||| |  ||| ||||||||||||||||| |||| |||||||    
T  24415024 gtgtaattaatgtatctcttttgtgtgttaatattaccaaattatcatttgtttgtatgtgtattaaatttgacttttcat 24415104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 30898643 - 30898575
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||||||  |||| |||||||||||||| ||||| | |||| |||||||||||||||||    
T  30898643 agtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttgtttgtatgtgtattaaa 30898575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 44335312 - 44335376
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtat 319  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| |||| |||||| ||||||    
T  44335312 agtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttgtttgtacgtgtat 44335376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 46591125 - 46591205
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||   ||||||||||||||||||   |||||| |||| ||| ||||||||||||| |||||||||||    
T  46591125 agtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttctatgtgtattaaatttgatttttca 46591205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Complemental strand, 31808054 - 31807979
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |  ||| |||| |||||||| ||| ||||    
T  31808054 ttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcttttgtttgcatgtgtatcaaatttga 31807979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 41737146 - 41737221
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattga 328  Q
    |||||||||||||  |||| |||||||||||||||||||| |||||||  ||| ||||||||||| ||||| ||||    
T  41737146 ttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttgtttgtatgtgttttaaatttga 41737221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 8877799 - 8877873
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||   ||||||||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  8877799 taattaatgtgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgtattaaatttgactttt 8877873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 25258351 - 25258421
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||| |||||||||||| ||||| ||| || ||||||| ||||||| |||| |||||||||||||||||    
T  25258351 ttagtgcaattaatgtgtctattttatgtcttgatattaccaaattgtcctttgtttgtatgtgtattaaa 25258421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 32144341 - 32144415
Alignment:
Q  262 ttaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| |||||||| ||||||||||| |||||||  ||| ||||||||||||| ||| |||| |||||||    
T  32144341 ttaatgtgtctattttgtgcgttaatattaccaaattgtcatttgtttgtatgtgtataaaatttgacttttcat 32144415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 25063241 - 25063314
Alignment:
Q  263 taatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||  |||||||||||||||||||  |||||| |||| ||||||||||||||||| || | |||||||    
T  25063241 taatgtgtctgttttgtgtgttaatattacctaattgtcctttgtttgtatgtgtattaaatttcacttttcat 25063314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 47643565 - 47643643
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||||  || || |||||||||||||| ||||||| |||| |||| |||||||||||| |||| ||||||    
T  47643565 agtgtaattaatgtgt--atgttttgtgttaatattactaaattgtcctttgtttgcatgtgtattaaatttgacttttca 47643643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 50692437 - 50692494
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgt 317  Q
    |||||||||||| ||||||||||||| |||||| ||||||| |||| |||||||||||    
T  50692437 aattaatgtgtctattttgtgtgttagtattaccaaattgtcctttgtttgtatgtgt 50692494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 9684796 - 9684744
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttattt 309  Q
    |||||||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  9684796 tgtaattaatgtgtctgttttgtgcgttaatattacaaaattgtcctttattt 9684744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 16395627 - 16395547
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||| ||||||| |||||||||||| ||||| |  ||| ||||||||||| | ||| |||| |||||||    
T  16395627 gtgtaattaatgtgtctattttgtatgttaatattaccaaattatcttttgtttgtatgtgtgtaaaatttgacttttcat 16395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 51996978 - 51997058
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||||||| |||   |||| |||||||||||||| |||| || |||| ||||||||||||||||| |||| ||||||    
T  51996978 agtgtaattaatttgtatgttttctgtgttaatattaccaaatcgtcctttgtttgtatgtgtattaaatttgacttttca 51997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Complemental strand, 52141260 - 52141177
Alignment:
Q  252 attagtgtaattaatg--tgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||  |||| |||||||||||||||||||  ||||| |  ||| ||||||||||||||||| |||| ||||    
T  52141260 attagtgtaattaatgcgtgtctattttgtgtgttaatattatcaaattatcttttgtttgtatgtgtattaaatttgactttt 52141177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 3831076 - 3831151
Alignment:
Q  261 attaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||| || |||||||||||||||||||| |||||||  ||| ||||||||| | ||||| |||| |||||||    
T  3831076 attaatgtatctattttgtgtgttaatattacgaaattgtcatttgtttgtatgtatgttaaatttgacttttcat 3831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 15457877 - 15457814
Alignment:
Q  273 attttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||| ||||||||  |||||||  ||| ||||||||||||||||| ||||||||||||    
T  15457877 attttgtgtgataatattatcaaattgtcatttgtttgtatgtgtattaaatttgatttttcat 15457814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 23982670 - 23982591
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||  ||||||||||||||||||  ||||||   ||| ||||||| ||||||||| |||| |||||||    
T  23982670 tgtaattaatgtgtctgttttgtgtgttaatattatcaaattgacatttgtttgtatatgtattaaatttgacttttcat 23982591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 34696963 - 34696884
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttc 334  Q
    |||||||||||| ||||  ||||||||||||||||||| |||||||  ||| |||||||||| || ||| |||| |||||    
T  34696963 agtgtaattaatatgtctgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgcatgaaatttgacttttc 34696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 13145460 - 13145522
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||| ||||||| |||| |||||||||| |||||| |||| |||||||    
T  13145460 ttttgtatgttaatattaccaaattgtcctttgtttgtatgtgcattaaatttgacttttcat 13145522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 15911634 - 15911564
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||     ||| |||||||||||||||||    
T  15911634 ttagtgtacttaatgtgtctattttgtgtgttaatattaccaaataaccatttgtttgtatgtgtattaaa 15911564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 32047465 - 32047527
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgt 317  Q
    ||||||||||||||||   ||||||||||||||||||| |||||||  ||| |||||||||||    
T  32047465 agtgtaattaatgtgtttgttttgtgtgttaatattacgaaattgtcatttgtttgtatgtgt 32047527  T

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Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 44163255 - 44163321
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtatta 321  Q
    ||||||||||||||||   ||||||||||||||||||  |||||||  ||| |||||||||||||||    
T  44163255 agtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttgtttgtatgtgtatta 44163321  T

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Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 51390609 - 51390536
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||| |||||||||||||   |||| |||||||  ||| ||||||||||||||||| |||| |||||||    
T  51390609 aattaatgtgtctattttgtgtgtta---ttaccaaattgtcatttgtttgtatgtgtattaaatttgacttttcat 51390536  T

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Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 5852928 - 5852850
Alignment:
Q  256 gtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||||||   |||| |||||||||||| | ||||||| |||| |||| |||||||||||| |||| |||||||    
T  5852928 gtgtaattaatgtgtg--ttttatgtgttaatattccgaaattgtcctttgtttgcatgtgtattaaatttgacttttcat 5852850  T

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Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 6282502 - 6282563
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtatta 321  Q
    |||||||||||| ||||| ||||||||||||| |||||||| |||| ||| ||| |||||||    
T  6282502 aattaatgtgtctattttatgtgttaatattataaaattgtcctttgtttatatatgtatta 6282563  T

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Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 3072160 - 3072241
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||| |||||||||||  ||||| |||||||||||||  |||||||  ||| ||| ||||||||||||| |||| |||||||    
T  3072160 ttagtgcaattaatgtgtttattttatgtgttaatattattaaattgt--tttttttttatgtgtattaaatttgacttttcat 3072241  T

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Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 4081954 - 4082030
Alignment:
Q  260 aattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    |||||||||||  | ||||| |||||||||||| ||||| |  ||| | ||||||||||||||| ||||||||||||    
T  4081954 aattaatgtgtttagtttgtatgttaatattactaaattatcatttgtctgtatgtgtattaaatttgatttttcat 4082030  T

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Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 27531126 - 27531182
Alignment:
Q  259 taattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgt 315  Q
    ||||||||||||   |||||||||||||||||||  ||||||||||| |||||||||    
T  27531126 taattaatgtgtttgttttgtgtgttaatattacttaattgttctttgtttgtatgt 27531182  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 291704 - 291647
Alignment:
Q  266 tgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||| ||||||| |||||||||||| |||||||  ||| ||||||| |||||||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtcatttgtttgtatttgtattaaa 291647  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 4817967 - 4817906
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||| |||||||||  |||||||  ||| ||||||||||||||||| |||| ||||||    
T  4817967 ttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttca 4817906  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 4829767 - 4829706
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    |||||||| |||||||||  |||||||  ||| ||||||||||||||||| |||| ||||||    
T  4829767 ttttgtgtattaatattatcaaattgtcttttgtttgtatgtgtattaaatttgacttttca 4829706  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 35001331 - 35001282
Alignment:
Q  274 ttttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaa 323  Q
    |||||||||||||| |||  ||||||| |||| |||||||||||||||||    
T  35001331 ttttgtgtgttaatgttatgaaattgtcctttgtttgtatgtgtattaaa 35001282  T

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Target: scaffold0166 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 23729 - 23652
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttca 335  Q
    ||||||||||||||  ||||||| |||||||||||  |||||||||||| ||||||||||||||||| |||||||||||    
T  23729 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt-tttgtatgtgtattaaatttgatttttca 23652  T

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Target: scaffold0005 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 214640 - 214720
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||||||||||||||||| | ||| |||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||    
T  214640 ttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttgtttgtatgtgtattaaatttgactttt 214720  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 99888 - 99817
Alignment:
Q  265 atgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| |||||||||||||||||||| |||||||  ||| |||| |||||||||||| |||| |||||||    
T  99888 atgtgtctattttgtgtgttaatattacgaaattgtcttttgtttgaatgtgtattaaatttgacttttcat 99817  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 61361 - 61282
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||| ||||   ||||||||||||||||||  ||||||| |||||||| ||||||||||||| || | |||||||    
T  61361 tgtaattaacgtgtttgttttgtgtgttaatattattaaattgtcctttatttatatgtgtattaaatttaacttttcat 61282  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 49162 - 49238
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    |||||||||| |||| | |||||||||||||||||  |||||||  ||| |||| |||| ||||||| |||| ||||    
T  49162 tgtaattaatatgtctactttgtgtgttaatattattaaattgtcatttgtttgcatgtttattaaatttgactttt 49238  T

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Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 22084 - 22165
Alignment:
Q  255 agtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||||||||||||   |||||||| |||||||||| | ||||| |||| ||||||||| ||||||| || | |||||||    
T  22084 agtgtaattaatgtgtttgttttgtgtattaatattaccatattgtcctttgtttgtatgtatattaaatttaacttttcat 22165  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 38560 - 38480
Alignment:
Q  253 ttagtgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgattttt 333  Q
    ||||| ||||||||||||| |||||||||||||||||||| | ||| | | || ||| ||||| ||||||| |||| ||||    
T  38560 ttagtataattaatgtgtctattttgtgtgttaatattaccatattatccattgtttttatgtttattaaatttgactttt 38480  T

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Target: scaffold0699 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 336
Target Start/End: Original strand, 7604 - 7682
Alignment:
Q  257 tgtaattaatgtgtcgattttgtgtgttaatattacaaaattgttctttatttgtatgtgtattaaaattgatttttcat 336  Q
    ||||||| | ||||| ||||||| ||| | |||||||||||||| |||| ||| ||||||||||||| |||| |||||||    
T  7604 tgtaattgaggtgtctattttgt-tgtaagtattacaaaattgtcctttgtttatatgtgtattaaatttgacttttcat 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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