View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13828_high_1 (Length: 646)

Name: NF13828_high_1
Description: NF13828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13828_high_1
NF13828_high_1
[»] chr7 (41 HSPs)
chr7 (13-360)||(7632748-7633095)
chr7 (358-572)||(859153-859368)
chr7 (358-572)||(1217157-1217372)
chr7 (361-572)||(13882686-13882897)
chr7 (367-572)||(1220446-1220645)
chr7 (361-463)||(13886159-13886261)
chr7 (19-155)||(7639668-7639806)
chr7 (418-572)||(13886245-13886399)
chr7 (213-326)||(7639478-7639591)
chr7 (359-446)||(4888684-4888770)
chr7 (383-450)||(27309636-27309704)
chr7 (447-572)||(4303326-4303453)
chr7 (353-427)||(29175780-29175854)
chr7 (371-450)||(1786683-1786763)
chr7 (447-558)||(31577269-31577380)
chr7 (359-450)||(7803029-7803120)
chr7 (385-447)||(5934607-5934670)
chr7 (385-450)||(11000849-11000915)
chr7 (393-450)||(24840143-24840201)
chr7 (385-450)||(1365672-1365737)
chr7 (385-446)||(30217819-30217879)
chr7 (395-450)||(27142666-27142722)
chr7 (360-450)||(1369805-1369894)
chr7 (361-450)||(1874538-1874627)
chr7 (388-450)||(3778735-3778797)
chr7 (449-549)||(24840073-24840173)
chr7 (447-561)||(5678299-5678412)
chr7 (447-561)||(5703351-5703464)
chr7 (393-446)||(1753629-1753683)
chr7 (385-450)||(1883489-1883555)
chr7 (386-450)||(11228981-11229046)
chr7 (371-446)||(4133284-4133359)
chr7 (496-569)||(4300436-4300511)
chr7 (388-450)||(6451776-6451839)
chr7 (449-503)||(1369782-1369835)
chr7 (449-503)||(3778767-3778820)
chr7 (401-443)||(8063843-8063885)
chr7 (385-450)||(11228721-11228787)
chr7 (385-447)||(29974278-29974342)
chr7 (475-535)||(2767873-2767936)
chr7 (449-501)||(4888744-4888795)
[»] chr6 (20 HSPs)
chr6 (361-572)||(3535912-3536123)
chr6 (361-572)||(3542123-3542334)
chr6 (361-572)||(30049792-30050005)
chr6 (361-572)||(30052079-30052292)
chr6 (365-572)||(29340810-29341019)
chr6 (360-450)||(33615503-33615593)
chr6 (447-517)||(11190432-11190500)
chr6 (361-450)||(27822118-27822207)
chr6 (360-413)||(29342061-29342114)
chr6 (382-446)||(11658936-11659000)
chr6 (371-443)||(18727115-18727186)
chr6 (385-446)||(1127258-1127320)
chr6 (385-450)||(14238436-14238502)
chr6 (447-561)||(3565626-3565739)
chr6 (495-560)||(19232214-19232279)
chr6 (408-445)||(8049012-8049049)
chr6 (447-555)||(26571045-26571152)
chr6 (453-533)||(12882067-12882149)
chr6 (414-450)||(12882123-12882159)
chr6 (385-444)||(33215186-33215246)
[»] chr3 (22 HSPs)
chr3 (361-572)||(43306672-43306884)
chr3 (360-572)||(43303959-43304170)
chr3 (361-572)||(3063737-3063949)
chr3 (361-572)||(3068875-3069087)
chr3 (361-543)||(5128814-5128998)
chr3 (451-572)||(53012903-53013025)
chr3 (447-565)||(41218688-41218806)
chr3 (475-572)||(45168406-45168505)
chr3 (457-561)||(39913325-39913430)
chr3 (360-450)||(2472688-2472777)
chr3 (446-517)||(40593528-40593598)
chr3 (371-450)||(52708844-52708923)
chr3 (380-443)||(45168338-45168401)
chr3 (360-450)||(365592-365681)
chr3 (382-448)||(35908506-35908572)
chr3 (447-561)||(4580453-4580565)
chr3 (448-561)||(19949891-19950004)
chr3 (449-503)||(2472747-2472800)
chr3 (479-549)||(8536461-8536532)
chr3 (457-555)||(19795148-19795244)
chr3 (362-450)||(33175835-33175922)
chr3 (364-393)||(53013019-53013048)
[»] chr8 (30 HSPs)
chr8 (361-572)||(6845214-6845425)
chr8 (361-572)||(22926648-22926859)
chr8 (361-572)||(22921850-22922063)
chr8 (361-572)||(42891664-42891877)
chr8 (360-570)||(37189745-37189956)
chr8 (369-572)||(23570464-23570665)
chr8 (361-572)||(22512046-22512260)
chr8 (401-570)||(23573462-23573632)
chr8 (361-530)||(22520799-22520968)
chr8 (385-572)||(42890274-42890457)
chr8 (361-480)||(22519346-22519465)
chr8 (361-450)||(2189722-2189810)
chr8 (361-450)||(18468649-18468737)
chr8 (448-555)||(18180770-18180877)
chr8 (449-530)||(18468598-18468679)
chr8 (360-446)||(24731231-24731317)
chr8 (385-450)||(2687742-2687808)
chr8 (382-450)||(16598249-16598318)
chr8 (361-447)||(24731035-24731121)
chr8 (385-450)||(26374900-26374965)
chr8 (479-558)||(26150581-26150660)
chr8 (413-450)||(2609547-2609584)
chr8 (371-450)||(14130165-14130244)
chr8 (360-420)||(26378031-26378090)
chr8 (384-450)||(24578799-24578866)
chr8 (413-450)||(2689146-2689183)
chr8 (477-546)||(14130098-14130168)
chr8 (413-450)||(20693799-20693836)
chr8 (361-423)||(23573639-23573702)
chr8 (447-503)||(25479462-25479517)
[»] scaffold0110 (3 HSPs)
scaffold0110 (361-572)||(45262-45475)
scaffold0110 (449-572)||(46792-46917)
scaffold0110 (361-434)||(46733-46806)
[»] chr2 (30 HSPs)
chr2 (361-572)||(31633981-31634193)
chr2 (361-569)||(31636217-31636426)
chr2 (360-572)||(27952317-27952531)
chr2 (361-572)||(2155844-2156056)
chr2 (361-572)||(27956154-27956367)
chr2 (361-572)||(22011309-22011525)
chr2 (361-572)||(33655503-33655716)
chr2 (449-572)||(2165800-2165924)
chr2 (361-450)||(15129390-15129478)
chr2 (361-450)||(36647293-36647381)
chr2 (360-445)||(2165899-2165984)
chr2 (447-555)||(8781408-8781515)
chr2 (372-450)||(21772375-21772452)
chr2 (385-450)||(23457646-23457712)
chr2 (361-450)||(33051618-33051707)
chr2 (372-450)||(5171596-5171674)
chr2 (360-446)||(8294582-8294667)
chr2 (451-572)||(15129295-15129418)
chr2 (386-450)||(32161993-32162058)
chr2 (447-555)||(22264330-22264437)
chr2 (385-445)||(28737911-28737971)
chr2 (361-450)||(1518193-1518281)
chr2 (401-450)||(12966477-12966526)
chr2 (447-527)||(44675308-44675389)
chr2 (382-440)||(18945970-18946029)
chr2 (416-450)||(4184929-4184963)
chr2 (449-503)||(23457623-23457676)
chr2 (385-446)||(28737841-28737903)
chr2 (451-535)||(4184871-4184957)
chr2 (413-445)||(23456580-23456612)
[»] chr1 (26 HSPs)
chr1 (360-572)||(50857443-50857657)
chr1 (360-572)||(8931101-8931310)
chr1 (361-572)||(13443988-13444200)
chr1 (367-572)||(13441612-13441811)
chr1 (360-450)||(31915550-31915639)
chr1 (371-450)||(28660756-28660835)
chr1 (361-445)||(23987581-23987665)
chr1 (360-450)||(12944116-12944206)
chr1 (385-447)||(31913380-31913442)
chr1 (385-446)||(43681465-43681528)
chr1 (408-443)||(10927199-10927234)
chr1 (449-512)||(31915518-31915580)
chr1 (361-443)||(40058102-40058184)
chr1 (392-450)||(50713713-50713772)
chr1 (449-517)||(12486314-12486381)
chr1 (474-549)||(10927124-10927200)
chr1 (360-450)||(21903752-21903840)
chr1 (449-503)||(8221465-8221518)
chr1 (387-450)||(8967828-8967893)
chr1 (385-450)||(10925740-10925803)
chr1 (361-450)||(10928289-10928377)
chr1 (449-549)||(40804560-40804660)
chr1 (371-450)||(239687-239766)
chr1 (414-450)||(8221488-8221524)
chr1 (361-445)||(26981516-26981598)
chr1 (371-450)||(28661078-28661157)
[»] chr5 (12 HSPs)
chr5 (360-572)||(40778785-40778999)
chr5 (362-572)||(21848966-21849183)
chr5 (447-561)||(19677217-19677331)
chr5 (360-450)||(18252416-18252505)
chr5 (385-450)||(492567-492633)
chr5 (360-447)||(8456379-8456465)
chr5 (384-450)||(19497326-19497393)
chr5 (371-450)||(22440858-22440936)
chr5 (449-555)||(19497363-19497467)
chr5 (359-450)||(26140343-26140433)
chr5 (359-394)||(21844435-21844470)
chr5 (413-450)||(9868457-9868494)
[»] chr4 (23 HSPs)
chr4 (361-572)||(6659331-6659542)
chr4 (449-572)||(22691188-22691312)
chr4 (447-566)||(22716542-22716661)
chr4 (447-566)||(22988556-22988675)
chr4 (447-555)||(13085178-13085286)
chr4 (475-569)||(24667567-24667662)
chr4 (362-450)||(7723665-7723751)
chr4 (360-450)||(19935487-19935576)
chr4 (361-450)||(24667657-24667745)
chr4 (361-450)||(13991380-13991468)
chr4 (447-555)||(13086221-13086329)
chr4 (361-446)||(40206153-40206237)
chr4 (371-446)||(17254893-17254968)
chr4 (390-453)||(18689549-18689613)
chr4 (385-444)||(50515918-50515978)
chr4 (385-447)||(22486799-22486861)
chr4 (393-450)||(21433594-21433652)
chr4 (385-450)||(54700620-54700686)
chr4 (413-450)||(38888042-38888079)
chr4 (413-450)||(9260573-9260610)
chr4 (413-450)||(13990729-13990766)
chr4 (475-503)||(7724158-7724186)
chr4 (297-345)||(31255336-31255384)
[»] scaffold0054 (2 HSPs)
scaffold0054 (389-447)||(37714-37772)
scaffold0054 (401-450)||(49322-49371)
[»] scaffold0240 (3 HSPs)
scaffold0240 (388-446)||(16051-16109)
scaffold0240 (385-450)||(1658-1723)
scaffold0240 (385-447)||(14850-14912)
[»] scaffold0251 (1 HSPs)
scaffold0251 (385-450)||(9702-9769)
[»] scaffold0024 (1 HSPs)
scaffold0024 (385-450)||(145734-145800)
[»] scaffold0330 (1 HSPs)
scaffold0330 (385-450)||(17640-17705)
[»] scaffold0531 (1 HSPs)
scaffold0531 (408-445)||(11635-11672)


Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 13 - 360
Target Start/End: Complemental strand, 7633095 - 7632748
Alignment:
Q  13 aagaatatctgaaacgcaaaatgatttgagagaatattcgaaacagtaaggcactgaaagtaatgtccagtcgtcttcaagatccatgaatgactcaaat 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7633095 aagaaaatctgaaacgcaaaatgatttgagagaatattcgaaacagtaaggcactgaaagtaatgtccagtcgtcttcaagatccatgaatgactcaaat 7632996  T
Q  113 cgctacagaaaaataaatataaacaagtcaatggacatgagtatccttgaaacatggttcatatataatagaggttaagcatgattgaagatgtaccgta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7632995 cgctacagaaaaataaatataaacaagtcaatggacatgagtatccttgaaacatggttcatatataatagaggttaagcatgattgaagatgtaccgta 7632896  T
Q  213 tgaatatgaagagctttcagattaggagtctatagaagaatgcccgttactccttcactagtgaaagtgttagtcctcataagcagatgtgtcaaatttt 312  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7632895 tgaatatgaagagctttcagattaggagtctttagaagaatgcccgttactacttcactagtgaaagtgttagtcctcagaagcagatgtgtcaaatttt 7632796  T
Q  313 gaaatgaaggaagatgatggagagtctcctttgaatactcaagatact 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7632795 gaaatgaaggaagatgatggagagtctcctttgaatactcaagatact 7632748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 358 - 572
Target Start/End: Original strand, 859153 - 859368
Alignment:
Q  358 acttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcg 457  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  859153 acttgacgcaatacggaagcgtaggattagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcg 859252  T
Q  458 acaaacctatcaaaat-aagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataa 555  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||| | ||||||| |||||    
T  859253 acaaacctatcaaaataaaggtttccggaatccaccag-aattgagagaaaagtctcaaatattattaatgaataaaagtgtgcattttaggctacataa 859351  T
Q  556 gttctgcttatatagtg 572  Q
    ||| || ||||||||||    
T  859352 gttatgtttatatagtg 859368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 358 - 572
Target Start/End: Original strand, 1217157 - 1217372
Alignment:
Q  358 acttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcg 457  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1217157 acttgacgcaatacggaagcgtaggattagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcg 1217256  T
Q  458 acaaacctatcaaaat-aagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataa 555  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||| | ||||||| |||||    
T  1217257 acaaacctatcaaaataaaggtttccggaatccaccag-aattgagagaaaagtctcaaatattattaatgaataaaagtgtgcattttaggctacataa 1217355  T
Q  556 gttctgcttatatagtg 572  Q
    ||| || ||||||||||    
T  1217356 gttatgtttatatagtg 1217372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 13882686 - 13882897
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13882686 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 13882785  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttc 559  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| | ||| ||||| |||  ||| |||||||| | |||||||||    
T  13882786 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcaaataattttattgaatcaaaaagtgtctcttaggatacataagttc 13882884  T
Q  560 tgcttatatagtg 572  Q
    |||||||||||||    
T  13882885 tgcttatatagtg 13882897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 367 - 572
Target Start/End: Original strand, 1220446 - 1220645
Alignment:
Q  367 agtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaaccta 466  Q
    ||||| |||||||||||||||||| |||||||| || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1220446 agtacagaagcgtagggttagcaaacgctaaacctacatagaaatgaacaagtttgcaaacgacaaacttgtgaaaatagggttgcaagcgacaaaccta 1220545  T
Q  467 tcaaaataagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttctgctta 565  Q
    ||||||||  ||||      |||||||| ||||||||||||| |||| |||||| |||||||||| ||| |||||||||||||| ||||||||||| |||    
T  1220546 tcaaaatagaggtt------tccaccag-aattgagagaaaagtctctaatattgttaatgaatagaagcgtgcctcttaggctacataagttctgttta 1220638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 361 - 463
Target Start/End: Original strand, 13886159 - 13886261
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13886159 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataggtttgcaagcgaca 13886258  T
Q  461 aac 463  Q
    |||    
T  13886259 aac 13886261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 7639806 - 7639668
Alignment:
Q  19 atctgaaacgcaaaatgatttgagagaatattcgaaacagtaaggcactgaaagtaatgtccagtcgtcttcaagatccatgaatgactcaaatcgctac 118  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||  ||||||||| || ||| ||||    
T  7639806 atctgaaacgcaaaatgatttgagagaatatttgaaacagcaaggcactgaaagtaatggccagtcgtcttcaagatgtatgaatgacacagatccctac 7639707  T
Q  119 agaaaaataaat--ataaacaagtcaatggacatgagta 155  Q
    | ||||||||||  || ||||||||||||||||| ||||    
T  7639706 ataaaaataaattaatgaacaagtcaatggacataagta 7639668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 418 - 572
Target Start/End: Original strand, 13886245 - 13886399
Alignment:
Q  418 gtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaat 516  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||    
T  13886245 gtttgcaagcgacaaacttgtgaaaataggtttgcaagcgacaaacctatcaaaataagggtttccagaatccacca-taattgagagaaaatctcgaat 13886343  T
Q  517 attattaatgaataaaagtgtgcctcttaggctgcataagttctgcttatatagtg 572  Q
      | ||| ||||| |||  ||| |||||||| | ||||||||| ||||||||||||    
T  13886344 gattttattgaatcaaaaagtgtctcttaggatacataagttcagcttatatagtg 13886399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 7639591 - 7639478
Alignment:
Q  213 tgaatatgaagagctttcagattaggagtctatagaagaatgcccgttactccttcactagtgaaagtgttagtcctcataagcagatgtgtcaaatttt 312  Q
    |||| |||||||||||||||||||||||||| ||| |||||| || ||||| ||||||||||||||||||||| ||||| || |||| ||||||||||||    
T  7639591 tgaaaatgaagagctttcagattaggagtctttaggagaatgtccattactacttcactagtgaaagtgttagccctcagaaacagaagtgtcaaatttt 7639492  T
Q  313 gaaatgaaggaaga 326  Q
    ||||||||||||||    
T  7639491 gaaatgaaggaaga 7639478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 359 - 446
Target Start/End: Original strand, 4888684 - 4888770
Alignment:
Q  359 cttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||||| |||||||||||||| | |||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  4888684 cttgacgcaatacggaagcgtaggct-agcatgcgctgaacctagatagaaaagaacaagtttgcaagcgacaaacctgtgaaaatag 4888770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 27309636 - 27309704
Alignment:
Q  383 gttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27309636 gttagcaagcgctaaacctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 27309704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 447 - 572
Target Start/End: Complemental strand, 4303453 - 4303326
Alignment:
Q  447 ggttgcaagcga-caaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctc 542  Q
    |||||||||||| ||||||||| ||| ||||||||  |||||||||| |||| |||||||||||||||||||| | ||| |||||  |||||||||||||    
T  4303453 ggttgcaagcgaacaaacctattaaa-taagggttttcggaatccactagaa-ttgagagaaaatctcgaataattttattgaatcaaaaagtgtgcctc 4303356  T
Q  543 ttaggctgcataagttctgcttatatagtg 572  Q
    ||||||| ||||||| ||| ||||||||||    
T  4303355 ttaggctacataagtcctgtttatatagtg 4303326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 29175854 - 29175780
Alignment:
Q  353 aagatacttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagc 427  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  29175854 aagataattgactcactacggaagcgtagggttagcaagcgctaaacctagattgaaaagaaaaagtttgcaagc 29175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 1786763 - 1786683
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| |||||||| ||||||| |||||||||||  |||||||||||||||||||||| || ||||||||||||    
T  1786763 cggaagcgtaggattagcaagtgctaaacctagatagaaaaataacaagtttgcaagcgacaaacatgcgaaaatagggtt 1786683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 447 - 558
Target Start/End: Original strand, 31577269 - 31577380
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||| ||| ||||||| ||| ||||| |||  || ||||||    
T  31577269 ggttgcaagcgacaaacctatc-aaataagggtttccgaaatccaccag-aattgagagaaaagtcttgaatatttttattgaatgaaaaagttcctctt 31577366  T
Q  545 aggctgcataagtt 558  Q
    ||| ||||||||||    
T  31577367 aggttgcataagtt 31577380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 359 - 450
Target Start/End: Original strand, 7803029 - 7803120
Alignment:
Q  359 cttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||||| |||||||| | ||||| ||| | |||||||| ||||||||||||| |||||||| |||||||| ||||    
T  7803029 cttgacgcagtacggaagcgtagg-ttagcaagggttaaacctaggtcgaaaagaaacaagtttgcaagcaacaaacttatgaaaataaggtt 7803120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 5934670 - 5934607
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  5934670 tagcaagcgctaaacctagattgaaaagaaacaaatttgcaagcgacaaacttgtgaaaatagg 5934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 11000849 - 11000915
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||| ||||| |||||||| |||||| |||||||||||||| ||||||||||||||    
T  11000849 tagcaagcgctaaacctagattgaaaagaaacaagttcgcaagcgacaaactagtgaaaatagggtt 11000915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 24840201 - 24840143
Alignment:
Q  393 gctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  24840201 gctaaacctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 24840143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 1365737 - 1365672
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||| ||||| |||| ||||||||||| ||||||  |||||||||||||||||||    
T  1365737 tagcaagcgctaaacctagattgaaaggaacaagtttgtaagcgatgaacttgtgaaaatagggtt 1365672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 30217879 - 30217819
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||    
T  30217879 tagcaagcgctaaacctagattgaaa-gaacaagttcgcaagcgacaaacttgtgaaaatag 30217819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 27142722 - 27142666
Alignment:
Q  395 taaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27142722 taaacctagattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 27142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 1369894 - 1369805
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| |||||||| ||| | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||||||| |||||||||||    
T  1369894 ttgacgcagt-cggaagcggaggct-agcaagcgttaaacctagattgaaaagaaacaagtttgcaagcgataaacttgttaaaatagggtt 1369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 1874627 - 1874538
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| |||||||||||||| | ||||||| | |||||| | ||| |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  1874627 tgacgtagtacggaagcgtatg-ttagcaaacactaaaccttgattgaaaagaaacaagtttgcaaacgacaaacttgtgaaaataaggtt 1874538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 3778735 - 3778797
Alignment:
Q  388 caagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| |||||  ||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  3778735 caagcactaaatatagattgaaatgaacaagtttgcaagcgagaaacttgtgaaaatagggtt 3778797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 549
Target Start/End: Complemental strand, 24840173 - 24840073
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctc--gaatattatt-aatgaataaaagtgtgcctctta 545  Q
    ||||||||||||||| | | |||||| |||||||||||||||||||||||||||| ||| ||||   ||||||||| ||| ||||||||| |||||||||    
T  24840173 ttgcaagcgacaaacttgtgaaaata-gggttccggaatccaccagaaattgaga-aaactctctaaaatattattcaataaataaaagt-tgcctctta 24840077  T
Q  546 ggct 549  Q
    ||||    
T  24840076 ggct 24840073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 5678299 - 5678412
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    |||| ||||||||||||||||| ||||||||||||    || |||||| ||||||||||||| ||||||||| | ||| ||||| |||  ||| ||||||    
T  5678299 ggttacaagcgacaaacctatc-aaataagggttcacatatacaccag-aattgagagaaaagtctcgaataattttattgaatgaaaaagtgtctctta 5678396  T
Q  546 ggctgcataagttctg 561  Q
     |||||||||||||||    
T  5678397 agctgcataagttctg 5678412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 5703351 - 5703464
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    |||| ||||||||||||||||| ||||||||||||    || |||||| ||||||||||||| ||||||||| | ||| ||||| |||  ||| ||||||    
T  5703351 ggttacaagcgacaaacctatc-aaataagggttcacatatacaccag-aattgagagaaaagtctcgaataattttattgaatgaaaaagtgtctctta 5703448  T
Q  546 ggctgcataagttctg 561  Q
     |||||||||||||||    
T  5703449 agctgcataagttctg 5703464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 1753629 - 1753683
Alignment:
Q  393 gctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||| || || |||||||| ||||||||||||||||||||||||||||||||    
T  1753629 gctaaacctaaattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaatag 1753683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 1883555 - 1883489
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| | |||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| ||||    
T  1883555 tagcaaacactaaacctagattgaaaagaaacaagtttgcaaacgacaaacttgtgaaaataaggtt 1883489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 11229046 - 11228981
Alignment:
Q  386 agcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| ||||||| ||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  11229046 agcaagtgctaaacctagattgaaaaagaacaagtttgcaggcgacaaacgtgtgaaaaaagggtt 11228981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 4133284 - 4133359
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||||||||||| | |||||  ||||||||||||| ||| | |||||| ||| ||||||||||||||||||||||||    
T  4133284 cggaagcgtaggct-agcaaatgctaaacttagattgaagatgaacaaattttcaagcgacaaacttgtgaaaatag 4133359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 569
Target Start/End: Complemental strand, 4300511 - 4300436
Alignment:
Q  496 aattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagttctgcttatata 569  Q
    ||||||||||||||||| |||| | | | |||||  ||||||||| |||||||||| |||||||||| ||||||||    
T  4300511 aattgagagaaaatctcaaataatttgattgaatcaaaaagtgtgtctcttaggctacataagttctccttatata 4300436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 450
Target Start/End: Original strand, 6451776 - 6451839
Alignment:
Q  388 caagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||  ||||| |||| ||| |||||||||||||||||||| |||||||||| ||||    
T  6451776 caagcgctaaatctagattgaaaggaaacaagtttgcaagcgacaaacctgtgaaaataaggtt 6451839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 1369835 - 1369782
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    |||||||||| |||| | | |||||| ||||||||||||||||||||||||||||    
T  1369835 ttgcaagcgataaacttgttaaaata-gggttccggaatccaccagaaattgaga 1369782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 3778767 - 3778820
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    |||||||||| |||| | | |||||| ||||||||||||||||||||||||||||    
T  3778767 ttgcaagcgagaaacttgtgaaaata-gggttccggaatccaccagaaattgaga 3778820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 443
Target Start/End: Original strand, 8063843 - 8063885
Alignment:
Q  401 tagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 443  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||    
T  8063843 tagattgaaaagaacaagtttgcaagcgataaatttgtgaaaa 8063885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 11228787 - 11228721
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| | |||||| | |||| ||||||| |||||||| |||||||||||||||| ||||||||||    
T  11228787 tagcaaacactaaaccttgataaaaaagaaacaagtttggaagcgacaaacttgtggaaatagggtt 11228721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 447
Target Start/End: Original strand, 29974278 - 29974342
Alignment:
Q  385 tagcaagcgctaaacttagataga--aaagaacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||| |||| |||||||||  ||||||||| ||||||||| |||||| | ||||||||||    
T  29974278 tagcaagcgttaaatttagatagagaaaagaacaaatttgcaagctacaaacctatgaaaatagg 29974342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 535
Target Start/End: Complemental strand, 2767936 - 2767873
Alignment:
Q  475 agggttccggaatccaccagaaattgagagaaaatctc--gaatattattaa-tgaataaaagt 535  Q
    |||||| |||||||||||||||||||||| ||| ||||   ||||||||||| |||||||||||    
T  2767936 agggtttcggaatccaccagaaattgagaaaaactctctaaaatattattaattgaataaaagt 2767873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 449 - 501
Target Start/End: Original strand, 4888744 - 4888795
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattga 501  Q
    ||||||||||||||||| | |||||| | |||||||||| |||||||||||||    
T  4888744 ttgcaagcgacaaacctgtgaaaata-gagttccggaattcaccagaaattga 4888795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 3536123 - 3535912
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3536123 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 3536024  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3536023 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 3535924  T
Q  561 gcttatatagtg 572  Q
    ||||||||||||    
T  3535923 gcttatatagtg 3535912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 3542334 - 3542123
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3542334 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgtaagcgacaaacttgtgaaaatagggttgcaagcgaca 3542235  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3542234 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 3542135  T
Q  561 gcttatatagtg 572  Q
    ||||||||||||    
T  3542134 gcttatatagtg 3542123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 30050005 - 30049792
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30050005 tgacgcagtacggaagcgaagggttagcaagcgctaaacctatatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagagttgcaagcgaca 30049906  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagtt 558  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||| |||| |||||||    
T  30049905 aacctatcaaaattagggttccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgtgtctcttaagctgaataagtt 30049806  T
Q  559 ctgcttatatagtg 572  Q
     |||||||||||||    
T  30049805 ttgcttatatagtg 30049792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 30052292 - 30052079
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||| |||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30052292 tgacgcagtatggaatcgaagggttagaaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagagttgcaagcgaca 30052193  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagtt 558  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  30052192 aacctatcaaaattagggttccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgtgtctcttaagctgcataagtt 30052093  T
Q  559 ctgcttatatagtg 572  Q
     |||||||||||||    
T  30052092 ttgcttatatagtg 30052079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 365 - 572
Target Start/End: Original strand, 29340810 - 29341019
Alignment:
Q  365 gcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacc 464  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29340810 gcagtacggaagcgtagggttagcaggcgctaaacctagatagaaaaaaacaagtttgcaagcgacaaacttgtgaaaatagggttacaagcgacaaacc 29340909  T
Q  465 tatcaaaat-aagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaat-aaaagtgtgcctcttaggctgcataagttctg 561  Q
    ||||||||| |||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||   |||||||||||||||||||||    
T  29340910 tatcaaaataaaggtttccggaatccactag-aattgagagaaaagtctcgaatattattaatgaataaaaagtgtttgtcttaggctgcataagttctg 29341008  T
Q  562 cttatatagtg 572  Q
    |||||||||||    
T  29341009 cttatatagtg 29341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 33615503 - 33615593
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||| ||||||| |||||| | | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33615503 ttgacgcattacggaaacgtaggctaa-caagcgcaaaacctagatagaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 33615593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 11190500 - 11190432
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaata 517  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  11190500 ggttgcaagcgacaaacctatc-aaataaggtttccggaatccaccag-aattgagagaaaatctcgaata 11190432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 27822118 - 27822207
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||| | ||||| |||||||| || ||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27822118 tgacgcagtacggaagcgtaggct-agcaaacgctaaacctaaatagaaaaggaacaagttttcaagcgacaaacttgtgaaaacagggtt 27822207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 29342114 - 29342061
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaaga 413  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29342114 ttgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaaga 29342061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 11659000 - 11658936
Alignment:
Q  382 ggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||||||| |||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  11659000 ggttagcaagcactaaacctagattgaaaagaacaaatttgcaagcgataaacttgtgaaaatag 11658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 18727186 - 18727115
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 443  Q
    |||||||||||| | ||||| |||||||| ||||| |||||  ||||||| ||||||||||||||||||||||    
T  18727186 cggaagcgtaggct-agcaaacgctaaacctagattgaaaaacacaagttcgcaagcgacaaacttgtgaaaa 18727115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 1127320 - 1127258
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||| |||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||||    
T  1127320 tagcgagcgctaaacctagattaaaaagaaacaagtttgcaagcgacaaatttgtgaaaatag 1127258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 14238502 - 14238436
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| | |||||| || || |||||||| ||||||||||||||||||||||||||||||| ||||    
T  14238502 tagcaaacactaaacataaattgaaaagaaacaagtttgcaagcgacaaacttgtgaaaataaggtt 14238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 561
Target Start/End: Complemental strand, 3565739 - 3565626
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    ||||| |||||| |||||||||||| |||| ||| ||  |||||||||||| ||||||||||| ||||||||||| ||| ||||| |||  |||||||||    
T  3565739 ggttgtaagcgataaacctatcaaa-taagagtttccaaaatccaccagaa-ttgagagaaaagtctcgaatatttttattgaatgaaaa-gtgcctctt 3565643  T
Q  545 aggctgcataagttctg 561  Q
     |||| |||||||||||    
T  3565642 tggctacataagttctg 3565626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 560
Target Start/End: Complemental strand, 19232279 - 19232214
Alignment:
Q  495 aaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 560  Q
    ||||||||| |||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||||||||    
T  19232279 aaattgagataaaagtctcgaatattgttattgaataaa-gtgtgtctcgtaggctgcataagttct 19232214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Original strand, 8049012 - 8049049
Alignment:
Q  408 aaaagaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  8049012 aaaagaaaaagtttgcaagtgacaaacttgtgaaaata 8049049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 555
Target Start/End: Complemental strand, 26571152 - 26571045
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    |||||||||||||||| |||| ||| || |||||  |||||||| | |||| |||||||||||||||||||| | ||| ||||| ||   ||| ||||||    
T  26571152 ggttgcaagcgacaaatctattaaa-taggggttttcggaatccgctagaa-ttgagagaaaatctcgaataattttattgaatgaataagtggctctta 26571055  T
Q  546 ggctgcataa 555  Q
    ||||||||||    
T  26571054 ggctgcataa 26571045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 533
Target Start/End: Complemental strand, 12882149 - 12882067
Alignment:
Q  453 aagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctc--gaatattatt-aatgaataaaa 533  Q
    ||||||||||| | | |||||| ||||| |||||||||||||||||||||| ||| ||||   ||||||||| |||||||||||    
T  12882149 aagcgacaaacttgtgaaaata-gggtttcggaatccaccagaaattgagaaaaactctctaaaatattattgaatgaataaaa 12882067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Complemental strand, 12882159 - 12882123
Alignment:
Q  414 acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||  |||||||||||||||||||||||||||    
T  12882159 acaagttttaaagcgacaaacttgtgaaaatagggtt 12882123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 33215186 - 33215246
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaat 444  Q
    |||||| |||||||  |||||  ||||||| |||||||||||||||||||| |||||||||    
T  33215186 tagcaaacgctaaatctagattaaaaagaaacaagtttgcaagcgacaaacctgtgaaaat 33215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 7e-91; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 43306672 - 43306884
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43306672 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcaacaaacttgtgaaaatagggttgcaagcgaca 43306771  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  43306772 aacctatcaaaataagggtttccgtaatccaccag-aattgagagaaaagtcttgaatattattaatgaataaaagtgtgcctcttaggctacataagtt 43306870  T
Q  559 ctgcttatatagtg 572  Q
    ||||||||||||||    
T  43306871 ctgcttatatagtg 43306884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 360 - 572
Target Start/End: Original strand, 43303959 - 43304170
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43303959 ttgacgcagtacggaagcgtaaggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 43304058  T
Q  460 aaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||||||    
T  43304059 aaacctattaaaataagggtttccgaaatccaccag-aattgagagaaaagtctcgaatattattaatgaataaaagtgt--ctcttaggctacataagt 43304155  T
Q  558 tctgcttatatagtg 572  Q
    |||||||||||||||    
T  43304156 tctgcttatatagtg 43304170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 3063737 - 3063949
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  3063737 tgacgcagtacgaaagcgtagggttagcaagcgttaaacctagatagaaaagaaagagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 3063836  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    |||||||||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  3063837 aacctatcaaaataagggttttcggaatcaaccag-aattgagagaaaagtctcgaatattattaatgaataaaagtgtacctcttaggctacataagtt 3063935  T
Q  559 ctgcttatatagtg 572  Q
     |||||||||||||    
T  3063936 atgcttatatagtg 3063949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 3068875 - 3069087
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  3068875 tgacgcagtacggaagcgtatggttagcaagcgctaaacctagatagaaaagaacaagtttgcaaggaaaaaacttgtaaaaatagggttgcaagcgaca 3068974  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  3068975 aacctatcaaaataagggtttccggaatccacca-aaattgagagaaaagtatcgaatattattaatgaataaaagtgtgcatcttaggctacataagtt 3069073  T
Q  559 ctgcttatatagtg 572  Q
     |||||||||||||    
T  3069074 atgcttatatagtg 3069087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 361 - 543
Target Start/End: Complemental strand, 5128998 - 5128814
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5128998 tgacgcagtacagaagcgtagggttagcaggcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 5128899  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctct 543  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||  ||||||||||||||    
T  5128898 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgtgcctct 5128814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 451 - 572
Target Start/End: Complemental strand, 53013025 - 53012903
Alignment:
Q  451 gcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggc 548  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53013025 gcaagcgacaaacctatcaaaataagggtttccggaatccaccagaa-ttgagagaaaagtctcgaatattattaatgaataaaagtgtgcctcttaggc 53012927  T
Q  549 tgcataagttctgcttatatagtg 572  Q
    | ||| |||| |||||||||||||    
T  53012926 tacattagttatgcttatatagtg 53012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 447 - 565
Target Start/End: Complemental strand, 41218806 - 41218688
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  41218806 ggttgtaagcgacaaacctatcaaa-taaggctttccggaatccaccagaa-ttgagagaaaagtctcgaatattattattgaataaaagtgtgtctctt 41218709  T
Q  545 aggctgcataagttctgctta 565  Q
    ||||| |||||||||||||||    
T  41218708 aggctccataagttctgctta 41218688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 475 - 572
Target Start/End: Original strand, 45168406 - 45168505
Alignment:
Q  475 agggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagttctgcttatatagtg 572  Q
    |||||||| |||||||| ||||||||||||||||||||||||| | ||| |||||  |||| | |||||||||| |||||||| ||||||||||||||||    
T  45168406 agggttccagaatccacaagaaattgagagaaaatctcgaataattttattgaataaaaaaatatgcctcttagtctgcataacttctgcttatatagtg 45168505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 39913325 - 39913430
Alignment:
Q  457 gacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaat-aaaagtgtgcctcttaggctgcata 554  Q
    |||||||||||||||   |||| ||||||||||||||||| ||| ||||||| ||||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  39913325 gacaaacctatcaaatagaggggtccggaatccaccagaa-ttgggagaaaagtctcgaatatttttattgaatcaaaaatgtgcctcttaggctgcata 39913423  T
Q  555 agttctg 561  Q
    |||||||    
T  39913424 agttctg 39913430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 2472688 - 2472777
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||| ||||||||| | |||||||||||||| || || ||||   |||||||||||| ||||||||||||||||||||||||    
T  2472688 ttgacgcagtacgaaagcgtaggct-agcaagcgctaaacctaaattgaaagagacaagtttgcaaccgacaaacttgtgaaaatagggtt 2472777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 40593528 - 40593598
Alignment:
Q  446 gggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaata 517  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||| |||||||||||||||||||||||    
T  40593528 gggttgcaagcgacaaacctatc-aaataagggttttcggaatccacca-aaattgagagaaaatctcgaata 40593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 52708923 - 52708844
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| ||| |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||| |||||||    
T  52708923 cggaagcgtagg-ttaacaagcgctaaacctagatagaaaaagaacaaatttgcaagcgataaacttgtgaaagtagggtt 52708844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 443
Target Start/End: Original strand, 45168338 - 45168401
Alignment:
Q  380 agggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaa 443  Q
    |||||||||||| ||||||| ||||| ||||  |||||||||||||||||||||||||||||||    
T  45168338 agggttagcaagtgctaaacctagattgaaataaacaagtttgcaagcgacaaacttgtgaaaa 45168401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 365592 - 365681
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||| |||||||||||||| | ||||| |||||||| || | |||||| ||||| ||  ||||||||||||||||||||||||||||    
T  365592 ttgacgcattacggaagcgtaggct-agcaaacgctaaacctaaaaagaaaataacaaattcccaagcgacaaacttgtgaaaatagggtt 365681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 448
Target Start/End: Original strand, 35908506 - 35908572
Alignment:
Q  382 ggttagcaagcgctaaacttagatagaaaagaac-aagtttgcaagcgacaaacttgtgaaaataggg 448  Q
    |||||||||||||||||| ||||||| ||||||| || ||||||| |||||||||||| |||||||||    
T  35908506 ggttagcaagcgctaaacctagatag-aaagaacaaaatttgcaaacgacaaacttgtaaaaataggg 35908572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 561
Target Start/End: Complemental strand, 4580565 - 4580453
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    |||||||||||||||||||||| ||||||||| || | |||||||| || ||||||||||||| ||||||||||| ||| ||||| |||  |||| ||||    
T  4580565 ggttgcaagcgacaaacctatc-aaataagggttttcagaatccactag-aattgagagaaaattctcgaatatt-ttattgaatgaaa-agtgcatctt 4580470  T
Q  545 aggctgcataagttctg 561  Q
    | |||||| ||||||||    
T  4580469 acgctgcaaaagttctg 4580453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 561
Target Start/End: Complemental strand, 19950004 - 19949891
Alignment:
Q  448 gttgcaagcgacaaacctatcaaaataagggttcc-ggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    |||||||||||||||| ||||||| ||||||||   |||||||| ||||| ||||||||||| |||| |||||| ||| | ||| | |  ||| ||||||    
T  19950004 gttgcaagcgacaaacttatcaaa-taagggtttttggaatccatcagaa-ttgagagaaaagtctctaatatttttattcaatgataaagtgactctta 19949907  T
Q  546 ggctgcataagttctg 561  Q
    ||||||||||||||||    
T  19949906 ggctgcataagttctg 19949891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Original strand, 2472747 - 2472800
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    |||||| |||||||| | | |||||| ||||||||||||||||||||||||||||    
T  2472747 ttgcaaccgacaaacttgtgaaaata-gggttccggaatccaccagaaattgaga 2472800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 479 - 549
Target Start/End: Original strand, 8536461 - 8536532
Alignment:
Q  479 ttccggaatccaccagaaattgagagaaaatctc--gaatattat-taatgaataaaagtgtgcctcttaggct 549  Q
    |||||||||||||||||||||||| |||| ||||   |||||||| |||||||||||||| |||||||||||||    
T  8536461 ttccggaatccaccagaaattgag-gaaactctctaaaatattatctaatgaataaaagt-tgcctcttaggct 8536532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 19795244 - 19795148
Alignment:
Q  457 gacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataa 555  Q
    |||||||||||  |||||||| || || ||||||||| ||||| ||||||||||| ||||| | ||| |||||||||   || ||||||||||||||||    
T  19795244 gacaaacctatgcaaataagg-ttacgaaatccacca-aaatttagagaaaatctggaataattttattgaataaaaaattgtctcttaggctgcataa 19795148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 450
Target Start/End: Complemental strand, 33175922 - 33175835
Alignment:
Q  362 gacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||| |||||||||||| | ||||| || ||||| || || ||||||| ||||||||||||  ||||||||| |||||||||||||    
T  33175922 gacgcagt-cggaagcgtaggct-agcaaacgataaacctatattgaaaagagacaagtttgcaaaggacaaacttatgaaaatagggtt 33175835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 393
Target Start/End: Complemental strand, 53013048 - 53013019
Alignment:
Q  364 cgcagtacggaagcgtagggttagcaagcg 393  Q
    ||||||||||||||||||||||||||||||    
T  53013048 cgcagtacggaagcgtagggttagcaagcg 53013019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 1e-89; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 6845425 - 6845214
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  6845425 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttacaagcgataaacttgtgaaaatagggttgcaagcgaca 6845326  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttct 560  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||| |||||||| | ||||||||||    
T  6845325 aacctatcaaaataagggtttcggaatccaccaaaaattgagagaaaatctcgaatattattaatgaatcaaaaagtgtctcttaggatacataagttct 6845226  T
Q  561 gcttatatagtg 572  Q
    ||||||||||||    
T  6845225 gcttatatagtg 6845214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 22926648 - 22926859
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22926648 tgacgtagtacggaagcgtagggttagaaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 22926747  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttc 559  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||| ||||| ||| |||| ||||||||||||||||||||    
T  22926748 aacctatcaaaataagggtttctggaatccaccag-aattgagagaaaatctcgaatatttttattgaattaaattgtgtctcttaggctgcataagttc 22926846  T
Q  560 tgcttatatagtg 572  Q
    |||||||||||||    
T  22926847 tgcttatatagtg 22926859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 22921850 - 22922063
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22921850 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaataagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 22921949  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||  ||| ||||| ||||||||||||||||||    
T  22921950 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaggtgtgtctcttaggctgcataagt 22922048  T
Q  558 tctgcttatatagtg 572  Q
    ||||| |||||||||    
T  22922049 tctgcatatatagtg 22922063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 42891664 - 42891877
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42891664 tgacgcaatacggaagcgtagggctagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 42891763  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| | ||| |||||  |||||||||||||||||||| |||||||    
T  42891764 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcaaataattttattgaatcaaaaagtgtgcctcttaggctacataagt 42891862  T
Q  558 tctgcttatatagtg 572  Q
    |||||||||||||||    
T  42891863 tctgcttatatagtg 42891877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 360 - 570
Target Start/End: Complemental strand, 37189956 - 37189745
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    |||||||||||||||||| |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37189956 ttgacgcagtacggaagcttagggttagcaagctctaaaactagatagaaaagaataagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 37189857  T
Q  460 aaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||||| |||||| |||| |||| ||    
T  37189856 aaacctatcaaaataagggttccgaaatccaccagaaattgaga-aaaatctcgaatattattaatgaataaaaaagtgtacctcttgggctacatatgt 37189758  T
Q  558 tctgcttatatag 570  Q
    |||| ||||||||    
T  37189757 tctgtttatatag 37189745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 369 - 572
Target Start/End: Complemental strand, 23570665 - 23570464
Alignment:
Q  369 tacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatc 468  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23570665 tacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataaggttgcaagcgacaaacctatc 23570566  T
Q  469 aaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttctgcttat 566  Q
    |||||||||| |||| |||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||   |||||||||| ||||||    
T  23570565 aaaataagggtttccagaatgcaccag-aattgagagaaaagtctcgaatattatttatgaataaaagtgtgcctcttag---gcataagttccgcttat 23570470  T
Q  567 atagtg 572  Q
    ||||||    
T  23570469 atagtg 23570464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 22512046 - 22512260
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22512046 tgacgcagtacggaagtgtagggttagcaagcgctaaacctaggtagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagtgaca 22512145  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat---aaaagtgtgcctcttaggctgcataag 556  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| | ||| |||||   ||||||||| |||||||| | ||||||    
T  22512146 aacctatcaaaataagggtttccgaaatccaccag-aattgagagaaaatctcgaataattttattgaataaaaaaagtgtgactcttaggttacataag 22512244  T
Q  557 ttctgcttatatagtg 572  Q
    | ||||||||||||||    
T  22512245 tgctgcttatatagtg 22512260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 401 - 570
Target Start/End: Complemental strand, 23573632 - 23573462
Alignment:
Q  401 tagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaatt 499  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||  |||||    
T  23573632 tagatagaaaataacaagtttacaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataagggtttccgaaatccacc-taaatt 23573534  T
Q  500 gagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttctgcttatatag 570  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  23573533 gagagaaaagtctcgaatattattaatgaataaaagtgtgcctcttaggctacataagttccgcttatatag 23573462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 361 - 530
Target Start/End: Original strand, 22520799 - 22520968
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||| || |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  22520799 tgacgcaataaggaagcgtagggttagcaagcgctaaacctaggtagaaaagatcaagtttgcaagcgacaaatttgtgaaaatagggttgcaagtgaca 22520898  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaata 530  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| ||||||    
T  22520899 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaata 22520968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 385 - 572
Target Start/End: Complemental strand, 42890457 - 42890274
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaacctatcaaaataaggg-ttccg 483  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  42890457 tagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggctgcaagcgacaaacctatcaaaataagggtttccg 42890358  T
Q  484 gaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagttctgcttatatagtg 572  Q
    ||||||||||       ||||||||||||||||| | ||| |||||  |||||||||||||||||||| |||||||| ||||||| |||||    
T  42890357 gaatccacca-------agagaaaatctcgaataattttattgaatcaaaaagtgtgcctcttaggctacataagttttgcttatgtagtg 42890274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 361 - 480
Target Start/End: Original strand, 22519346 - 22519465
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22519346 tgacgcagtacggaagtgtagggttagcaagcgctaaacctaggtagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagtgaca 22519445  T
Q  461 aacctatcaaaataagggtt 480  Q
    ||||||||||||||||||||    
T  22519446 aacctatcaaaataagggtt 22519465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 2189722 - 2189810
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||| | |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  2189722 tgacgcagtacggaagcgtaggct-agcaagcgctaaacctcgattgaaaagaacaagtttgcaagcgacaaacttgtgaaaataaggtt 2189810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 18468737 - 18468649
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||| |||||  |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  18468737 tgacgcagtacagaagca-agggttagcaagcgctaaacctaggtagaaaagaacaagcttgcaagcgacaaacttgtgaaaatagggtt 18468649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 448 - 555
Target Start/End: Original strand, 18180770 - 18180877
Alignment:
Q  448 gttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttag 546  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| | ||| ||||| |||  |||||||||||    
T  18180770 gttgcaagcgacaaacctatcaaaataagggtttccagaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgcctcttag 18180868  T
Q  547 gctgcataa 555  Q
    ||| |||||    
T  18180869 gctacataa 18180877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 449 - 530
Target Start/End: Complemental strand, 18468679 - 18468598
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaata 530  Q
    ||||||||||||||| | | |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18468679 ttgcaagcgacaaacttgtgaaaata-gggttccggaatccaccagaaattgagagaaaagtctcgaatattattaatgaata 18468598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 446
Target Start/End: Complemental strand, 24731317 - 24731231
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||||||||||||| |||||||| | |||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  24731317 ttgacgcagtacgggagcgtaggct-agcaagcgctaaacctagattgaaaaggaacaagtttgcaagcaacaaacttgtgaaaatag 24731231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 2687808 - 2687742
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2687808 tagcgagcgctaaacctagatagaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 2687742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 450
Target Start/End: Complemental strand, 16598318 - 16598249
Alignment:
Q  382 ggttagcaagcgctaaacttagat-agaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||    
T  16598318 ggttagcaagcgctaaacttagattagaaagaaacaagtttgcacgcgacaaacttgtgaaaatagggtt 16598249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 361 - 447
Target Start/End: Complemental strand, 24731121 - 24731035
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||| ||| |||||| | ||||||||||||| |||||| |||||| ||||||||||||||| |||||||||||||||||||    
T  24731121 tgacgcagtacagaaccgtaggct-agcaagcgctaaatttagattgaaaaggaacaagtttgcaagcaacaaacttgtgaaaatagg 24731035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 26374965 - 26374900
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||| ||| | ||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  26374965 tagcaagcgttaagcctagattgaaaagaacaagttcgcaagcgacaaacttgtaaaaatagggtt 26374900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 558
Target Start/End: Complemental strand, 26150660 - 26150581
Alignment:
Q  479 ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    |||| ||||||||||||| ||||||||||| ||||||||||| ||| ||||| |||  |||||||||| ||||||||||||    
T  26150660 ttccagaatccaccagaa-ttgagagaaaagtctcgaatatttttattgaatgaaaaagtgcctcttaagctgcataagtt 26150581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 450
Target Start/End: Original strand, 2609547 - 2609584
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||| |||||||||||||||||||||||    
T  2609547 aacaagtttgcaagtgacaaacttgtgaaaatagggtt 2609584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 14130244 - 14130165
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| || ||||||| ||||  ||||| ||||||| |||||||||||||||| ||| ||||||||||| ||||    
T  14130244 cggaagcgtaggctt-gcaagcgttaaatctagatcgaaaagagacaagtttgcaagcgataaatttgtgaaaataaggtt 14130165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 26378090 - 26378031
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtt 420  Q
    |||||| |||||||||||||||| | |||||||||||||  ||||| ||||||||||||||    
T  26378090 ttgacgtagtacggaagcgtaggct-agcaagcgctaaatctagattgaaaagaacaagtt 26378031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 450
Target Start/End: Original strand, 24578799 - 24578866
Alignment:
Q  384 ttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||| ||||||||||| ||||| |||||||| ||||||||||||||  |||  |||||||||||||||    
T  24578799 ttagaaagcgctaaacctagatcgaaaagaaacaagtttgcaagcggtaaatctgtgaaaatagggtt 24578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 450
Target Start/End: Complemental strand, 2689183 - 2689146
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||  |||||||||||||||    
T  2689183 aacaagtttgcaagcgacaaaactgtgaaaatagggtt 2689146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 14130168 - 14130098
Alignment:
Q  477 ggttccggaatccaccagaaattgagagaaaatctc--gaatattatt-aatgaataaaagtgtgcctcttag 546  Q
    ||||||||||||||||||||||||||| ||| ||||   ||||||||| ||||||||||||| ||||||||||    
T  14130168 ggttccggaatccaccagaaattgaga-aaactctccaaaatattattgaatgaataaaagt-tgcctcttag 14130098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 450
Target Start/End: Complemental strand, 20693836 - 20693799
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  20693836 aacaagtttgcaagcgacaaatttgtgaaaatatggtt 20693799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 423
Target Start/End: Complemental strand, 23573702 - 23573639
Alignment:
Q  361 tgacgcagtacggaagcgtagggttag--caagcgctaaacttagatagaaaagaacaagtttgc 423  Q
    ||||||||||| ||| |||||||||||  |||||||||| || |||||||||| |||||||||||    
T  23573702 tgacgcagtacagaaacgtagggttagggcaagcgctaagct-agatagaaaataacaagtttgc 23573639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 503
Target Start/End: Original strand, 25479462 - 25479517
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    ||||||||| |||||| || | ||||||||| |||||||||||||||||| ||||||    
T  25479462 ggttgcaagtgacaaatctttgaaaataagg-ttccggaatccaccagaatttgaga 25479517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 167; Significance: 4e-89; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 45262 - 45475
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  45262 tgacacagtacggaagcgtagggttagcaagcgctaaaattagataagaaagaacaagtttgcaagcgacaaacttatgaaaataaggttgcaagcgaca 45361  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaa--gtgtgcctcttaggctgcataagtt 558  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  45362 aacctatcaaaataagggttccagaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaaatgtttgcctcttaggctgcataagtt 45461  T
Q  559 ctgcttatatagtg 572  Q
    || |||||||||||    
T  45462 ctccttatatagtg 45475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 449 - 572
Target Start/End: Original strand, 46792 - 46917
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttag 546  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||||     
T  46792 ttgcaagcgacaaacctatcaaaattaaggttccggaatccaccaaaaattgagagaaaatctcgaatattattaatgaataaaaaagtgtgtctcttaa 46891  T
Q  547 gctgcataagttctgcttatatagtg 572  Q
    |||| ||||||| |||||||||||||    
T  46892 gctggataagttttgcttatatagtg 46917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 46733 - 46806
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaac 434  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46733 tgacgcagtacggaagcgtagggtgagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaac 46806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 6e-88; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 31634193 - 31633981
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  31634193 tgacgcagtacggaagcgtagggttagcaaacgctaaacctagatagaaaagaacaagtttgctagcgacaaacttgtgaaaataggattgcaagcgaca 31634094  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtg-tgcctcttaggctgcataagttc 559  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||||| ||||||||||||||    
T  31634093 aacctatcaaaataagggtttcggaatccaccagaaattgagagaaaatctcaaatattattaatgaataaaaaagttgcctcttcggctgcataagttc 31633994  T
Q  560 tgcttatatagtg 572  Q
    | |||||||||||    
T  31633993 tacttatatagtg 31633981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 361 - 569
Target Start/End: Complemental strand, 31636426 - 31636217
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  31636426 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaactagtttgcaagcgacaaacttgtgaaaatatggttgcaagcgaca 31636327  T
Q  461 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtg-tgcctcttaggctgcataagttc 559  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | || ||||| |||| |||||||||    
T  31636326 aacctatcaaaataagggttccggaatccaccagaaattgagagaaaatcttgaatattattaatgaataaaaaagttgtctcttcggctacataagttc 31636227  T
Q  560 tgcttatata 569  Q
    | ||||||||    
T  31636226 tacttatata 31636217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 360 - 572
Target Start/End: Original strand, 27952317 - 27952531
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27952317 ttgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 27952416  T
Q  460 aaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataag 556  Q
    |||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||  |||||||||||||||||||| ||||||    
T  27952417 aaacctttgaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgtgcctcttaggctacataag 27952515  T
Q  557 ttctgcttatatagtg 572  Q
    ||||||||||||||||    
T  27952516 ttctgcttatatagtg 27952531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 2156056 - 2155844
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  2156056 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcgagcgacaaacttgtgaaaataggattgcaagcgaca 2155957  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    |||||||||||||||||| || ||||||||| ||| ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  2155956 aacctatcaaaataagggttttcggaatccatcag-aattgagagaaaagtcttgaatattattattgaataaaagtgtgtctcttaggctgcataagtt 2155858  T
Q  559 ctgcttatatagtg 572  Q
    ||||||||||||||    
T  2155857 ctgcttatatagtg 2155844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 27956154 - 27956367
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  27956154 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacctatgaaaatagggttgcaagcgaca 27956253  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||  |||||||||||||||||||| |||||||    
T  27956254 aacctatgaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgtgcctcttaggctacataagt 27956352  T
Q  558 tctgcttatatagtg 572  Q
    |||||||||||||||    
T  27956353 tctgcttatatagtg 27956367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 22011525 - 22011309
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22011525 tgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaacaagtttgcaagtgacaaacttgtgaaaatagggttggaagcgaca 22011426  T
Q  461 aacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaa----agtgtgcctcttaggctgcata 554  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    |||  | |||||||||| ||||    
T  22011425 aacctatcaaaataagggtttccggaatccaccagaa-ttgagagaaaagtctcgaatattattaatgaataaataaaagtcggtctcttaggctacata 22011327  T
Q  555 agttctgcttatatagtg 572  Q
    |||| |||||||||||||    
T  22011326 agttttgcttatatagtg 22011309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 361 - 572
Target Start/End: Complemental strand, 33655716 - 33655503
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  33655716 tgacgcagtacggaagtgtagg-ttagcaagcgctaaacctagatagaaaaatacaagtttgcaagcgacaaacttgtgaaaatagggttgcaaacgaca 33655618  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| |||||  ||||||||||||||||||||  ||  ||    
T  33655617 aacctatcaaaataagggtttccggaatccaccagaaattgagagaaaatctcgaataattttattgaatgaaaaagtgtgcctcttaggctaaattggt 33655518  T
Q  558 tctgcttatatagtg 572  Q
    ||| |||||||||||    
T  33655517 tctccttatatagtg 33655503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 449 - 572
Target Start/End: Complemental strand, 2165924 - 2165800
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttag 546  Q
    |||||||| |||||| |||||||||||  |||  | |||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  2165924 ttgcaagcaacaaacttatcaaaataaatgttttcagaatccacca-aaattgagagaaaagtctcgaatattattaatgaataaaaatgtgtctcttag 2165826  T
Q  547 gctgcataagttctgcttatatagtg 572  Q
    |||||||||||||| |||||||||||    
T  2165825 gctgcataagttctccttatatagtg 2165800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 15129478 - 15129390
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15129478 tgacgtagtacggaagcgtaggct-agcaagcgctaaacctagatagaaaagaacaagttcgcaagcgacaaacttgtgaaaatagggtt 15129390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 36647381 - 36647293
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||||||||| | |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36647381 tgacgcagtacggaagcgtaggct-agcaagcgctaaacctcgattgaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 36647293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 2165984 - 2165899
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    |||||||||||||  |||||||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||| | ||||||    
T  2165984 ttgacgcagtacgacagcgtagggttaacaagcgttaaacctagatagaaaagaacaagtttgcaagcaacaaacttatcaaaata 2165899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 555
Target Start/End: Complemental strand, 8781515 - 8781408
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat-aaaagtgtgcctctta 545  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||| |||||||||||| | ||| ||||| ||||  ||||||||||    
T  8781515 ggttgcaagcgacaaacctatc-aaataagggtttcgaaatccaccag-aattgagagtaaatctcgaataattttattgaatgaaaaaagtgcctctta 8781418  T
Q  546 ggctgcataa 555  Q
    ||||||||||    
T  8781417 ggctgcataa 8781408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 21772452 - 21772375
Alignment:
Q  372 ggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  21772452 ggaagcgtagg-ttagccaacgctaaacttagattgaaaaaaacaagtttgcaagcgacaaacttatgaaaatagggtt 21772375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 23457712 - 23457646
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  23457712 tagcaagcgctaaacctagattgaaaataaacaagtttgcaagcgacaaacttgtgaaaatagggtt 23457646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 33051707 - 33051618
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| ||||||||||| |||| | |||||||||||||| || || ||||| ||||||||||||||||||||||||| |||||||||||||    
T  33051707 tgacgtagtacggaagcttaggct-agcaagcgctaaacctaaattgaaaaagaacaagtttgcaagcgacaaacttttgaaaatagggtt 33051618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 5171596 - 5171674
Alignment:
Q  372 ggaagcgtagggttagcaagcgctaaacttagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||| ||| |||||||||||  ||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  5171596 ggaagcgtagg-ttaacaagcgctaaatctagattgaaaagagacaagtttgcaagcgacaaacttgtaaaaatagggtt 5171674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 446
Target Start/End: Complemental strand, 8294667 - 8294582
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaa-aagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||||||||| ||||||| |||| | |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||    
T  8294667 ttgacgcagt-cggaagcataggct-agcaagtgctaaacttagatagaagaagaacacgtttgcaagcgacaaacttgtaaaaatag 8294582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 451 - 572
Target Start/End: Complemental strand, 15129418 - 15129295
Alignment:
Q  451 gcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaa---tctcgaatattattaatgaa-taaaagtgtgcctcttag 546  Q
    ||||||||||||| | | |||||| ||||||| ||||| |||||||| | ||||||||   |||  ||||||||  ||||| ||||||||||||||||||    
T  15129418 gcaagcgacaaacttgtgaaaata-gggttccagaatcaaccagaaaat-agagaaaagtctctgaaatattatagatgaaataaaagtgtgcctcttag 15129321  T
Q  547 gctgcataagttctgcttatatagtg 572  Q
    ||| ||||||||||||||||||||||    
T  15129320 gctacataagttctgcttatatagtg 15129295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 450
Target Start/End: Original strand, 32161993 - 32162058
Alignment:
Q  386 agcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||| ||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  32161993 agcaagcgttaaacctagatcgaaaagaaacaagtttgcaagtgacaaacttgtgaaaatagggtt 32162058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 447 - 555
Target Start/End: Complemental strand, 22264437 - 22264330
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttag 546  Q
    ||||||||| |||||||||||| ||  |||| |||  ||||||| ||||| |||||| ||||||||||||| | ||| ||||| |||  |||||||||||    
T  22264437 ggttgcaagagacaaacctatcgaataaaggtttctagaatccatcagaa-ttgagataaaatctcgaataattttattgaatcaaaaagtgcctcttag 22264339  T
Q  547 gctgcataa 555  Q
    |||||||||    
T  22264338 gctgcataa 22264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 28737971 - 28737911
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    ||||||| ||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||    
T  28737971 tagcaagtgctaaacctagattgaaaagagcaagtttgcaagcgacaaacttttgaaaata 28737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 1518281 - 1518193
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||||||||    ||||||||||| ||| ||||| |||| | ||||||| ||||||||| ||||| |||||||||||||    
T  1518281 tgacgcagtacggaagcgta-tcctagcaagcgcttaacctagattgaaagggacaagttcgcaagcgacgaacttatgaaaatagggtt 1518193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 12966526 - 12966477
Alignment:
Q  401 tagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  12966526 tagattgaaaagaacaagttcgcaagcgacgaacttgtgaaaatagggtt 12966477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 527
Target Start/End: Original strand, 44675308 - 44675389
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa--tctcgaatattattaatga 527  Q
    |||||||||||||| ||||||| ||||||||| || ||||||||||||| |||||||||||||  | ||||||| |||||||||    
T  44675308 ggttgcaagcgacatacctatc-aaataagggttttcggaatccaccag-aattgagagaaaaagtttcgaatactattaatga 44675389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 440
Target Start/End: Complemental strand, 18946029 - 18945970
Alignment:
Q  382 ggttagcaagcgctaaacttagatagaaaagaac-aagtttgcaagcgacaaacttgtga 440  Q
    |||||||||||||||||| ||||| || |||||  || ||||||||||||||||||||||    
T  18946029 ggttagcaagcgctaaacgtagattgagaagaaataaatttgcaagcgacaaacttgtga 18945970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 450
Target Start/End: Complemental strand, 4184963 - 4184929
Alignment:
Q  416 aagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| |||||||||||||||||||||||||||||    
T  4184963 aagttcgcaagcgacaaacttgtgaaaatagggtt 4184929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 23457676 - 23457623
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    ||||||||||||||| | | |||||| |||||||||||||||||| |||||||||    
T  23457676 ttgcaagcgacaaacttgtgaaaata-gggttccggaatccaccaaaaattgaga 23457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 28737903 - 28737841
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgac-aaacttgtgaaaatag 446  Q
    ||||||||||||||| || || |||||||  ||||||||||| ||| ||||||||||||||||    
T  28737903 tagcaagcgctaaacctaaattgaaaagagtaagtttgcaagagacaaaacttgtgaaaatag 28737841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 451 - 535
Target Start/End: Complemental strand, 4184957 - 4184871
Alignment:
Q  451 gcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctc--gaatattatt-aatgaataaaagt 535  Q
    ||||||||||||| | | |||||| ||||| |||||||||| ||||||||||| ||| ||||   ||||||||| |||||||||||||    
T  4184957 gcaagcgacaaacttgtgaaaata-gggtttcggaatccacgagaaattgagaaaaactctctaaaatattattgaatgaataaaagt 4184871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 23456612 - 23456580
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    |||||||||||||||||||||||| ||||||||    
T  23456612 aacaagtttgcaagcgacaaacttttgaaaata 23456580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 2e-85; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 360 - 572
Target Start/End: Original strand, 50857443 - 50857657
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  50857443 ttgacgcagtacggaagcgtagggttagcaagcgctaaacctagatagaaaagaataagtttgtaagcgacaaacttgtgaaaatagggttgcaagcgac 50857542  T
Q  460 aaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataag 556  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| || ||  |||||||||||||||||||||||||||    
T  50857543 aaacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaataattttattgtatcaaaaagtgtgcctcttaggctgcataag 50857641  T
Q  557 ttctgcttatatagtg 572  Q
    ||||||||||||||||    
T  50857642 ttctgcttatatagtg 50857657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 360 - 572
Target Start/End: Complemental strand, 8931310 - 8931101
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8931310 ttgacgcagtacggaagcgtagggttagcaagcgctaaacctagattgaaaaaaacaagtttgcaagcgataaacttgtgaaaatagggttgcaagcgac 8931211  T
Q  460 aaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatga-ataaaagtgtgcctcttaggctgcataagtt 558  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||   |||||||||| ||    
T  8931210 aaacctatcaatataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgataaaaaagtgtgtctc---ggctgcataa-tt 8931115  T
Q  559 ctgcttatatagtg 572  Q
    ||||||||||||||    
T  8931114 ctgcttatatagtg 8931101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 13443988 - 13444200
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    ||||||||| ||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13443988 tgacgcagttcggaagcatagggttaacaagcactaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaataggattgcaagcgaca 13444087  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagtt 558  Q
    ||| |||||||||||||| ||||| |||||||||| ||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||| ||||||||    
T  13444088 aacatatcaaaataagggtttccgtaatccaccag-aattgagagaaaagtctctaatattattactgaataaaaatgtgcctcttaggctacataagtt 13444186  T
Q  559 ctgcttatatagtg 572  Q
    ||||||||||||||    
T  13444187 ctgcttatatagtg 13444200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 367 - 572
Target Start/End: Original strand, 13441612 - 13441811
Alignment:
Q  367 agtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaaaccta 466  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||||    
T  13441612 agtacggaagagtatggttagcaagcgctaaacttagatagaaaagaacaattttgcaagcg-------tgtgaaaatagggttgcaagcgaaaaaccta 13441704  T
Q  467 tcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttaggctgcataagttctgctt 564  Q
    | ||||||||| || |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  13441705 ttaaaataaggatttccggaatccatcagaa-ttgagagaaaagtctctaatattattaatgaataaaagtgtgcctcttaggctatataagttcagctt 13441803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 31915639 - 31915550
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| |||||||||||| ||| | ||||||| |||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||    
T  31915639 ttgacgtagtacggaagcgcaggct-agcaagcactaaacttaggttgaaagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 31915550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 450
Target Start/End: Original strand, 28660756 - 28660835
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| | ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  28660756 cggaagcgtaggat-agcaaacgctaaacctagatagataagaaacaagtttgcaagcgacaaacttgtgaaaatagggtt 28660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 23987665 - 23987581
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  23987665 tgacgcaattcggaagcgtagggt-agcaagcgctgaacctagatagaaaaagaacaactttgcaaacgacaaacttgtgaaaata 23987581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 12944206 - 12944116
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||  ||| ||||||||| | |||||||||||||  ||||| |||||||| ||||||||||| |||||||||||| |||||||||||    
T  12944206 ttgacgcaacacgaaagcgtaggct-agcaagcgctaaatctagattgaaaagaaacaagtttgcaaacgacaaacttgtaaaaatagggtt 12944116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 31913442 - 31913380
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||||||| ||| | ||||  |||||||||||||||||||||||||| ||||||||    
T  31913442 tagcaagcgctaaacctaggttgaaagaaacaagtttgcaagcgacaaacttgtaaaaatagg 31913380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 43681528 - 43681465
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa--caagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||||||||||| ||||| ||||| ||  ||||||||||||||||||| ||||||||||||    
T  43681528 tagcaagcgctaaacctagattgaaaaaaaaacaagtttgcaagcgacaaatttgtgaaaatag 43681465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 443
Target Start/End: Complemental strand, 10927234 - 10927199
Alignment:
Q  408 aaaagaacaagtttgcaagcgacaaacttgtgaaaa 443  Q
    ||||||||||||||||||||||||||||||||||||    
T  10927234 aaaagaacaagtttgcaagcgacaaacttgtgaaaa 10927199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 512
Target Start/End: Complemental strand, 31915580 - 31915518
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctc 512  Q
    ||||||||||||||| | | |||||| |||||||||||||||||||||||||||| ||| ||||    
T  31915580 ttgcaagcgacaaacttgtgaaaata-gggttccggaatccaccagaaattgagaaaaactctc 31915518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 443
Target Start/End: Original strand, 40058102 - 40058184
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaac-aagtttgcaagcgacaaacttgtgaaaa 443  Q
    |||||| ||||||||||||||| | |||||||  ||||| || |||||||||||  ||||||||||||||||||||| ||||||    
T  40058102 tgacgcggtacggaagcgtaggct-agcaagcagtaaacctaaatagaaaagaaataagtttgcaagcgacaaacttatgaaaa 40058184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 450
Target Start/End: Complemental strand, 50713772 - 50713713
Alignment:
Q  392 cgctaaacttagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||| ||||| ||||||| ||||||| ||| |||||||||||||||||||||||||    
T  50713772 cgctaaacctagattgaaaagagacaagttcgcaggcgacaaacttgtgaaaatagggtt 50713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 449 - 517
Target Start/End: Original strand, 12486314 - 12486381
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaatctcgaata 517  Q
    |||||||| |||||||||| ||| ||||||||  |||||||||||| |||||||||||||||||||||||    
T  12486314 ttgcaagcaacaaacctattaaa-taagggttttcggaatccacca-aaattgagagaaaatctcgaata 12486381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 474 - 549
Target Start/End: Complemental strand, 10927200 - 10927124
Alignment:
Q  474 aagggttccggaatccaccagaaattgagagaaaatctc--gaatatta-ttaatgaataaaagtgtgcctcttaggct 549  Q
    |||||||||||||||||||||||||||||| ||| ||||   ||||||| ||||||||||||||| || ||||||||||    
T  10927200 aagggttccggaatccaccagaaattgaga-aaactctctaaaatattatttaatgaataaaagt-tgtctcttaggct 10927124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 21903840 - 21903752
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| |||||| ||||| |||  ||||||||||||||||| |||||| || ||||||| | ||||| |||||||||||||||||||    
T  21903840 ttgacgcagt-cggaagagtagg-ttaataagcgctaaacttagattgaaaagaaataagtttgtaggcgac-aacttgtgaaaatagggtt 21903752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 8221518 - 8221465
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgaga 503  Q
    |||||| |||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  8221518 ttgcaaacgacaaacttatgaaaata-gggttctggaatccaccagaaattgaga 8221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 450
Target Start/End: Original strand, 8967828 - 8967893
Alignment:
Q  387 gcaagcgctaaacttagataga--aaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||| ||||| ||||||||  |||||||||||||||||  ||||||| | |||||||||||||    
T  8967828 gcaagcgttaaacctagatagagaaaagaacaagtttgcaaatgacaaacctatgaaaatagggtt 8967893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 10925803 - 10925740
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||| || || |||||  |||| |||||||||||||||||||| |||||| ||||    
T  10925803 tagcaagcgctaaacctaaattgaaaa--acaattttgcaagcgacaaacttgtaaaaatatggtt 10925740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 10928377 - 10928289
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaaga-acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| ||||||||||| | |||||| ||||||| |||||  |||||| | ||||||| ||| |||||||||||||||||| ||||    
T  10928377 tgacgcagta-ggaagcgtaggct-agcaagtgctaaacctagattaaaaagatataagtttgtaagtgacaaacttgtgaaaataaggtt 10928289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 549
Target Start/End: Complemental strand, 40804660 - 40804560
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaat--aaaagtgtgcctctt 544  Q
    |||||||||||||||||||| ||||| ||| ||||  |||||||||| ||||||||||||| ||||||||| ||||| |||||  |||||| ||||||||    
T  40804660 ttgcaagcgacaaacctatc-aaatacgggtttccaaaatccaccag-aattgagagaaaagtctcgaata-tattattgaatgaaaaagt-tgcctctt 40804565  T
Q  545 aggct 549  Q
    |||||    
T  40804564 aggct 40804560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 239766 - 239687
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| | |||||| |||||||||| ||  ||||||| |||||| ||||||| |||| || |||||||||||||    
T  239766 cggaagcgtaggct-agcaagggctaaacttatattaaaaagaaacaagttagcaagcgtcaaatttatgaaaatagggtt 239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 450
Target Start/End: Complemental strand, 8221524 - 8221488
Alignment:
Q  414 acaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| |||||||||| |||||||||||||    
T  8221524 acaagtttgcaaacgacaaacttatgaaaatagggtt 8221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 26981598 - 26981516
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    ||||||||| |||||||||||| ||| | || ||||||  ||||| ||||  ||||||||||||||||| |||||||| ||||||    
T  26981598 tgacgcagt-cggaagcgtagg-ttatctagggctaaatctagattgaaagaaacaagtttgcaagcgaaaaacttgtaaaaata 26981516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 450
Target Start/End: Original strand, 28661078 - 28661157
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| | |||||| ||||||| || || || ||||| ||||||||||||||| |||| ||| |||||||||||    
T  28661078 cggaagcgtaggct-agcaagtgctaaacctaaattgataagaaacaagtttgcaagcgaaaaacctgtaaaaatagggtt 28661157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 2e-78; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 360 - 572
Target Start/End: Original strand, 40778785 - 40778999
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgac 459  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40778785 ttgacgcagtacggaagcgcagggttaacaagcgctaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtaaaaatagggttgcaagcgac 40778884  T
Q  460 aaacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataag 556  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| | ||| |||||  ||||||||||||||||| || ||||||    
T  40778885 aaacctatcaaaataagggtttctggaatccaccag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgtgcctcttagactacataag 40778983  T
Q  557 ttctgcttatatagtg 572  Q
    ||||||||||||||||    
T  40778984 ttctgcttatatagtg 40778999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 362 - 572
Target Start/End: Original strand, 21848966 - 21849183
Alignment:
Q  362 gacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaa 461  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21848966 gacgcagtacggaagcgtagggttagcaagcgccaaacctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgacaa 21849065  T
Q  462 acctatcaaaataa-------gggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgca 552  Q
    || |||||||||||        | || |||||||||| || |||||||||||||||||||||| | ||| |||||  |||||||| ||| ||||||| ||    
T  21849066 acttatcaaaataaaaataagtgttttcggaatccactag-aattgagagaaaatctcgaataattttattgaatcaaaaagtgtacct-ttaggctaca 21849163  T
Q  553 taagttctgcttatatagtg 572  Q
    ||||||  ||||||||||||    
T  21849164 taagtttcgcttatatagtg 21849183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 19677217 - 19677331
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaata-aaagtgtgcctct 543  Q
    ||||||||||||||||||| ||||| ||||||||  ||||||||||||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||||    
T  19677217 ggttgcaagcgacaaacctttcaaa-taagggttttcggaatccaccagaa-ttgagagaaaagtctcgaatatt-ttattgaatacaaagtgtgcctct 19677313  T
Q  544 taggctgcataagttctg 561  Q
    |||| |||||||||||||    
T  19677314 taggatgcataagttctg 19677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 18252505 - 18252416
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaa-agaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| |||||| ||||| ||| |||||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  18252505 ttgacgcagt-cggaagtgtaggctta-caagcgttaaacctagatagaaatagaacaagtttgcaagcgacaaacctgtgaaaatagggtt 18252416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 492633 - 492567
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  492633 tagcaagcgctaaatttagattgaaaagaaacaagtttgcaagcgacaaacttgtgaagatagggtt 492567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 360 - 447
Target Start/End: Original strand, 8456379 - 8456465
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaag-aacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||| |||||| |||||||| ||||||||| ||||||| ||||||||    
T  8456379 ttgacgcagt-cggaagcgtagggt-agcaagcgctaaacctagattgaaaagaaacaagttcgcaagcgacgaacttgtaaaaatagg 8456465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 450
Target Start/End: Original strand, 19497326 - 19497393
Alignment:
Q  384 ttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||||||  |||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  19497326 ttagcaagcgctaaatgtagaaaaaaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 19497393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 22440936 - 22440858
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||| ||| ||||||||||||||| ||| |||||||||    
T  22440936 cggaagcgtaggct-agcaagtgctaaacctagatagaaaagaacatgttcgcaagcgacaaacttatgataatagggtt 22440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 555
Target Start/End: Original strand, 19497363 - 19497467
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctcttaggc 548  Q
    ||||||||||||||| | | |||||| |||||||| |||||| || ||||||||| |||||||| || || |||| ||||| |||  |||||||||||||    
T  19497363 ttgcaagcgacaaacttgtgaaaata-gggttccgaaatccatcaaaaattgagaaaaaatctctaaaat-attattgaatcaaaaagtgcctcttaggc 19497460  T
Q  549 tgcataa 555  Q
    |||||||    
T  19497461 tgcataa 19497467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 450
Target Start/End: Complemental strand, 26140433 - 26140343
Alignment:
Q  359 cttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaa-agaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||| ||||||| |||| ||||||| |||||||  ||||| |||| | |||||| ||||||||||||||||| |||||||||||||    
T  26140433 cttgacgcagt-cggaagcatagg-ttagcaaacgctaaatctagattgaaagaaaacaagattgcaagcgacaaacttatgaaaatagggtt 26140343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 359 - 394
Target Start/End: Original strand, 21844435 - 21844470
Alignment:
Q  359 cttgacgcagtacggaagcgtagggttagcaagcgc 394  Q
    ||||||||||||||||||||||||||||||||||||    
T  21844435 cttgacgcagtacggaagcgtagggttagcaagcgc 21844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 450
Target Start/End: Original strand, 9868457 - 9868494
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  9868457 aacaagtttacaagcaacaaacttgtgaaaatagggtt 9868494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 2e-75; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 361 - 572
Target Start/End: Original strand, 6659331 - 6659542
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 460  Q
    |||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6659331 tgacgcagtacggaagtgtagg-ttagcaagcgctaaatctagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggttgcaagcgaca 6659429  T
Q  461 aacctatcaaaataaggg-ttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaat--aaaagtgtgcctcttaggctgcataagt 557  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| |||||  |||||| ||||||||||||| |||||||    
T  6659430 aacctatcaaaataagggtttccggaatccaccag-aattgagagaaaatctcgaatagttttagtgaatcaaaaagt-tgcctcttaggctacataagt 6659527  T
Q  558 tctgcttatatagtg 572  Q
    |||||||||||||||    
T  6659528 tctgcttatatagtg 6659542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 572
Target Start/End: Complemental strand, 22691312 - 22691188
Alignment:
Q  449 ttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctcttag 546  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  22691312 ttgcaagcgacaaacctatcgaaataagggtttccggaatccaccagaa-ttgagagaaaagtcttgaatattattaatgaataaaagtgtgcctcttag 22691214  T
Q  547 gctgcataagttctgcttatatagtg 572  Q
    ||| ||||||||||||||||||||||    
T  22691213 gctacataagttctgcttatatagtg 22691188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 22716661 - 22716542
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22716661 ggttgcaagcgacaaacctatcaaaaaaagggtttccggaatccaccagaa-ttgagagaaaagtctcgaatattattaatgaataaaagtgtgcctctt 22716563  T
Q  545 aggctgcataagttctgcttat 566  Q
    | ||| ||||||||||| ||||    
T  22716562 a-gctacataagttctggttat 22716542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 22988556 - 22988675
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggtt-ccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaataaaagtgtgcctctt 544  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22988556 ggttgcaagcgacaaacctatcgaaaaaagggtttccggaatccaccagaa-ttgagagaaaagtctcgaatattattaatgaataaaagtgtgcctctt 22988654  T
Q  545 aggctgcataagttctgcttat 566  Q
    | ||| ||||||||||| ||||    
T  22988655 a-gctacataagttctggttat 22988675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 447 - 555
Target Start/End: Original strand, 13085178 - 13085286
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataagggttc-cggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| | ||| |||||||||  ||| ||||||    
T  13085178 ggttgcaagcgacaaacctatcaaaataagggttttcggaatccacca-aaattgagagaaaatctcgaataattttattgaataaaaaagtgtctctta 13085276  T
Q  546 ggctgcataa 555  Q
    ||||||||||    
T  13085277 ggctgcataa 13085286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 475 - 569
Target Start/End: Complemental strand, 24667662 - 24667567
Alignment:
Q  475 agggttccggaatccaccagaaattgagagaaaa-tctcgaatattattaatgaa-taaaagtgtgcctcttaggctgcataagttctgcttatata 569  Q
    ||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  24667662 agggttccggaatccactagaaaat-agagaaaagtctcgaatattattaatgaaataaaagtgtgcctcttaggctacataagttctgcttatata 24667567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 450
Target Start/End: Original strand, 7723665 - 7723751
Alignment:
Q  362 gacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| |||||||||| | ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  7723665 gacgcagtacagaagcgtaggct-agcaagcgctaaact-agattgaaaagaacaagtttgcaagctacaaacttgtgaaaatagggtt 7723751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 19935576 - 19935487
Alignment:
Q  360 ttgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||||| |||||||||| | ||| ||||||||||| |||||||||| || || |||||||||||||||||| |||||||||||||    
T  19935576 ttgacgcagtacagaagcgtaggct-agccagcgctaaactcagatagaaaaaaataaatttgcaagcgacaaacttatgaaaatagggtt 19935487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 450
Target Start/End: Complemental strand, 24667745 - 24667657
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||||||| ||||||||||| | |||||||| ||||| |||||||||||||| ||| | ||| || ||||||||||||||||||||||    
T  24667745 tgacgcagtatggaagcgtaggct-agcaagcgttaaacctagatagaaaagaagaagctcgcaggcaacaaacttgtgaaaatagggtt 24667657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 450
Target Start/End: Original strand, 13991380 - 13991468
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||| |||||||||||| | |||||||||||||  ||||| |||||||| |||||||||||||||||||| || ||||||| ||||    
T  13991380 tgacgcagt-cggaagcgtaggct-agcaagcgctaaatctagattgaaaagaaacaagtttgcaagcgacaaacatgcgaaaataaggtt 13991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 447 - 555
Target Start/End: Original strand, 13086221 - 13086329
Alignment:
Q  447 ggttgcaagcgacaaacctatcaaaataag-ggttccggaatccaccagaaattgagagaaaatctcgaatattattaatgaataaaagtgtgcctctta 545  Q
    ||||| |||||||||||||||||||||||| | || | |||||||  || |||||||||||||||||||||| | ||| ||||| |||  ||||| ||||    
T  13086221 ggttgtaagcgacaaacctatcaaaataagagttttcagaatccattag-aattgagagaaaatctcgaataattttattgaattaaaaagtgcccctta 13086319  T
Q  546 ggctgcataa 555  Q
    ||| ||||||    
T  13086320 ggccgcataa 13086329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 446
Target Start/End: Complemental strand, 40206237 - 40206153
Alignment:
Q  361 tgacgcagtacggaagcgtagggttagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    ||||||| |||||||||||||| | |||||||||||||  || || ||||   ||||||| |||||||||||||||||||||||||    
T  40206237 tgacgcactacggaagcgtaggct-agcaagcgctaaatctaaattgaaagagacaagttcgcaagcgacaaacttgtgaaaatag 40206153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 17254893 - 17254968
Alignment:
Q  371 cggaagcgtagggttagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||||||||||| | ||||| |||||||||||||| ||| | |||||| ||| ||||||||||||||||||||||||    
T  17254893 cggaagcgtaggct-agcaaacgctaaacttagattgaagatgaacaaattttcaagcgacaaacttgtgaaaatag 17254968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 453
Target Start/End: Original strand, 18689549 - 18689613
Alignment:
Q  390 agcgctaaacttagatagaaaagaacaa-gtttgcaagcgacaaacttgtgaaaatagggttgca 453  Q
    |||||||||| ||||| |||||||| || ||||||| ||||||||||||| ||||||||||||||    
T  18689549 agcgctaaacctagattgaaaagaaaaaagtttgcatgcgacaaacttgtaaaaatagggttgca 18689613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 50515918 - 50515978
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaat 444  Q
    |||||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||    
T  50515918 tagcaagcgctacacttagactgagaagaaacaagtttgcaagcgacaaacttgtgaaaat 50515978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 447
Target Start/End: Original strand, 22486799 - 22486861
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||||||| || |||||||| || |||||||||||||||| ||||||||||||||||    
T  22486799 tagcaagcgctaaacctatatagaaaaagaccaagtttgcaagcgac-aacttgtgaaaatagg 22486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 21433594 - 21433652
Alignment:
Q  393 gctaaacttagatagaaaa-gaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||| ||||||||||| |||||| || ||||||||||||||| |||||||||||||    
T  21433594 gctaaacctagatagaaaaagaacaaattcgcaagcgacaaacttatgaaaatagggtt 21433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 54700620 - 54700686
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| |||||||| || || |||||||| |||||||||||| ||||||||||||| |||||||||    
T  54700620 tagcaaacgctaaacctatattgaaaagaaacaagtttgcaagtgacaaacttgtgagaatagggtt 54700686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 450
Target Start/End: Original strand, 38888042 - 38888079
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38888042 aacaaatttgcaagcgacaaacttgtgaaaatagggtt 38888079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 450
Target Start/End: Complemental strand, 9260610 - 9260573
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  9260610 aacaagtttgcaaacgacaaacttgcgaaaatagggtt 9260573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 450
Target Start/End: Original strand, 13990729 - 13990766
Alignment:
Q  413 aacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  13990729 aacaagtttgcaagtaacaaacttgtgaaaatagggtt 13990766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 475 - 503
Target Start/End: Original strand, 7724158 - 7724186
Alignment:
Q  475 agggttccggaatccaccagaaattgaga 503  Q
    |||||||||||||||||||||||||||||    
T  7724158 agggttccggaatccaccagaaattgaga 7724186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 31255336 - 31255384
Alignment:
Q  297 agatgtgtcaaattttgaaatgaaggaagatgatggagagtctcctttg 345  Q
    |||||||||||||| | ||||||||||||  |||||||||| |||||||    
T  31255336 agatgtgtcaaattgtcaaatgaaggaaggagatggagagtatcctttg 31255384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 37772 - 37714
Alignment:
Q  389 aagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37772 aagcgctaaacctagattgaaaagaacaagtttgcaagcgacaaacttatgaaaatagg 37714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 49371 - 49322
Alignment:
Q  401 tagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  49371 tagattgagaagaacaagtttgcaagcgacaaacttatgaaaatagggtt 49322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Complemental strand, 16109 - 16051
Alignment:
Q  388 caagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatag 446  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||| | |||||||||    
T  16109 caagtgctaaacctagatagaaaagaacaagtttgcaagtgacaaacatctgaaaatag 16051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 1723 - 1658
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||| ||||| ||||| ||||  ||||||||||||| |||||||||||| |||||| ||||    
T  1723 tagcaagcgttaaacctagattgaaagaaacaagtttgcaaacgacaaacttgtcaaaatatggtt 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 14912 - 14850
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagg 447  Q
    ||||||||||||||| | ||| ||||  || ||||| |||||||| |||||||||||||||||    
T  14912 tagcaagcgctaaaccttgattgaaataaataagttggcaagcgaaaaacttgtgaaaatagg 14850  T

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Target: scaffold0251 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 9769 - 9702
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgac--aaacttgtgaaaatagggtt 450  Q
    ||||||||| ||||| ||||| ||||||||||||||| ||||||||  | ||||||||||||||||||    
T  9769 tagcaagcggtaaacctagattgaaaagaacaagtttccaagcgactaacacttgtgaaaatagggtt 9702  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 145800 - 145734
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaa-caagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    |||||| |||||||| ||||| ||||| || |||||||||||||||||| ||||| |||||||||||    
T  145800 tagcaatcgctaaacctagattgaaaaaaatcaagtttgcaagcgacaagcttgtaaaaatagggtt 145734  T

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Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 17705 - 17640
Alignment:
Q  385 tagcaagcgctaaacttagatagaaaagaacaagtttgcaagcgacaaacttgtgaaaatagggtt 450  Q
    ||||||||| ||||| ||||| ||||  ||||||||||||| |||||||||||| |||||| ||||    
T  17705 tagcaagcgttaaacctagattgaaagaaacaagtttgcaaacgacaaacttgtcaaaatatggtt 17640  T

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Target: scaffold0531 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Original strand, 11635 - 11672
Alignment:
Q  408 aaaagaacaagtttgcaagcgacaaacttgtgaaaata 445  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  11635 aaaagaaaaagtttgcaagtgacaaacttgtgaaaata 11672  T

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