View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13828_low_5 (Length: 405)

Name: NF13828_low_5
Description: NF13828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13828_low_5
NF13828_low_5
[»] chr1 (98 HSPs)
chr1 (1-392)||(33231788-33232188)
chr1 (94-382)||(5084946-5085234)
chr1 (106-382)||(16582491-16582769)
chr1 (106-378)||(48721738-48722010)
chr1 (115-374)||(25269343-25269601)
chr1 (111-381)||(29140531-29140798)
chr1 (94-381)||(5321879-5322167)
chr1 (122-381)||(34696768-34697027)
chr1 (93-381)||(15512637-15512925)
chr1 (93-381)||(28948820-28949108)
chr1 (93-381)||(3143362-3143651)
chr1 (100-362)||(28334083-28334340)
chr1 (164-381)||(44652788-44653002)
chr1 (124-383)||(8877729-8877986)
chr1 (129-379)||(32047403-32047651)
chr1 (124-311)||(3831076-3831263)
chr1 (123-372)||(36084938-36085187)
chr1 (106-309)||(25063241-25063446)
chr1 (93-322)||(30898419-30898648)
chr1 (115-384)||(47643499-47643765)
chr1 (193-382)||(9675623-9675812)
chr1 (193-345)||(32152153-32152305)
chr1 (93-312)||(51390394-51390609)
chr1 (120-323)||(51996972-51997176)
chr1 (194-381)||(30336018-30336205)
chr1 (158-316)||(8984583-8984740)
chr1 (120-345)||(4817789-4818012)
chr1 (120-345)||(4829589-4829812)
chr1 (122-316)||(52141060-52141256)
chr1 (157-350)||(23982512-23982705)
chr1 (124-316)||(28723537-28723732)
chr1 (138-312)||(4813362-4813537)
chr1 (157-310)||(13145448-13145601)
chr1 (124-322)||(46495327-46495525)
chr1 (122-322)||(15179428-15179628)
chr1 (197-316)||(47070921-47071040)
chr1 (159-381)||(10160678-10160892)
chr1 (122-312)||(25258358-25258548)
chr1 (145-316)||(20564799-20564972)
chr1 (223-315)||(34102361-34102453)
chr1 (159-316)||(46591126-46591283)
chr1 (195-310)||(2342934-2343048)
chr1 (218-381)||(5852832-5852993)
chr1 (195-345)||(44335284-44335438)
chr1 (144-380)||(13723376-13723621)
chr1 (224-322)||(24415018-24415116)
chr1 (227-323)||(31305335-31305431)
chr1 (145-312)||(4081954-4082121)
chr1 (145-316)||(15911461-15911631)
chr1 (193-323)||(32144328-32144458)
chr1 (204-316)||(31807939-31808051)
chr1 (124-270)||(34012557-34012702)
chr1 (232-381)||(35001265-35001414)
chr1 (124-265)||(46732848-46732988)
chr1 (194-312)||(3072167-3072283)
chr1 (193-312)||(28679778-28679896)
chr1 (159-316)||(35365904-35366063)
chr1 (229-312)||(47754634-47754717)
chr1 (122-381)||(9684601-9684862)
chr1 (206-353)||(44395522-44395669)
chr1 (223-316)||(38680499-38680592)
chr1 (193-293)||(10842374-10842474)
chr1 (195-350)||(27531089-27531244)
chr1 (193-306)||(291591-291704)
chr1 (230-319)||(16395541-16395630)
chr1 (120-316)||(44163256-44163442)
chr1 (94-184)||(49033829-49033919)
chr1 (138-312)||(40261623-40261794)
chr1 (230-350)||(50692399-50692520)
chr1 (115-228)||(29302367-29302480)
chr1 (224-292)||(32715567-32715634)
chr1 (218-316)||(3143717-3143813)
chr1 (197-312)||(13352862-13352976)
chr1 (205-298)||(15457783-15457876)
chr1 (93-215)||(32715918-32716039)
chr1 (158-255)||(13698916-13699013)
chr1 (248-316)||(41737149-41737217)
chr1 (218-309)||(34331906-34331997)
chr1 (204-287)||(40612926-40613009)
chr1 (282-381)||(29302494-29302593)
chr1 (106-221)||(47753906-47754021)
chr1 (223-315)||(23393501-23393590)
chr1 (263-323)||(34012074-34012134)
chr1 (106-232)||(34102472-34102596)
chr1 (251-312)||(6282502-6282563)
chr1 (123-184)||(7957573-7957634)
chr1 (224-316)||(40702442-40702534)
chr1 (331-382)||(12845080-12845131)
chr1 (122-185)||(24415144-24415207)
chr1 (232-310)||(43414784-43414862)
chr1 (261-315)||(47133463-47133517)
chr1 (124-185)||(5852591-5852652)
chr1 (248-297)||(6023915-6023964)
chr1 (124-185)||(23393141-23393202)
chr1 (205-258)||(34028469-34028522)
chr1 (144-185)||(47133385-47133426)
chr1 (283-315)||(12706004-12706036)
chr1 (205-269)||(48573109-48573173)
[»] chr3 (82 HSPs)
chr3 (106-369)||(41727110-41727373)
chr3 (162-381)||(30476000-30476219)
chr3 (120-350)||(26517101-26517331)
chr3 (90-381)||(29676597-29676886)
chr3 (124-345)||(31819401-31819622)
chr3 (100-386)||(43186967-43187245)
chr3 (123-381)||(46048480-46048740)
chr3 (123-374)||(12077630-12077883)
chr3 (121-381)||(41308664-41308923)
chr3 (125-370)||(40645644-40645887)
chr3 (94-313)||(42891446-42891664)
chr3 (193-381)||(27638036-27638224)
chr3 (91-316)||(20945157-20945382)
chr3 (120-316)||(14645775-14645971)
chr3 (120-322)||(26043037-26043236)
chr3 (122-315)||(44083652-44083845)
chr3 (120-381)||(50524862-50525123)
chr3 (122-322)||(50363045-50363242)
chr3 (120-381)||(50092627-50092889)
chr3 (122-323)||(28477402-28477602)
chr3 (100-323)||(13084226-13084447)
chr3 (195-323)||(39617213-39617339)
chr3 (138-311)||(21932955-21933128)
chr3 (120-316)||(51263106-51263303)
chr3 (159-316)||(11388145-11388304)
chr3 (138-310)||(35055816-35055987)
chr3 (122-291)||(35145280-35145449)
chr3 (138-312)||(41739877-41740051)
chr3 (93-313)||(29349401-29349625)
chr3 (158-316)||(33287890-33288047)
chr3 (93-313)||(22659607-22659827)
chr3 (193-345)||(41543566-41543718)
chr3 (159-350)||(46435656-46435846)
chr3 (136-315)||(831262-831441)
chr3 (94-293)||(44338128-44338326)
chr3 (193-307)||(48309477-48309591)
chr3 (122-312)||(33411864-33412051)
chr3 (159-267)||(5504500-5504608)
chr3 (193-315)||(42010893-42011015)
chr3 (227-323)||(26121349-26121445)
chr3 (218-381)||(26998853-26999017)
chr3 (232-381)||(29645316-29645466)
chr3 (94-255)||(31530988-31531149)
chr3 (143-312)||(48902991-48903161)
chr3 (124-309)||(31474455-31474639)
chr3 (204-323)||(41825107-41825226)
chr3 (194-351)||(34055824-34055979)
chr3 (227-323)||(26243489-26243585)
chr3 (144-312)||(27047090-27047256)
chr3 (218-316)||(29611858-29611956)
chr3 (239-315)||(25750552-25750628)
chr3 (194-298)||(28229207-28229311)
chr3 (159-316)||(52325430-52325585)
chr3 (223-317)||(11344581-11344674)
chr3 (193-293)||(2421131-2421231)
chr3 (124-316)||(11140729-11140912)
chr3 (136-269)||(28228250-28228385)
chr3 (194-316)||(35765604-35765728)
chr3 (193-312)||(48901476-48901595)
chr3 (145-257)||(11396804-11396918)
chr3 (195-307)||(54425916-54426029)
chr3 (229-313)||(37729024-37729108)
chr3 (193-315)||(48581343-48581465)
chr3 (209-314)||(28243785-28243890)
chr3 (257-350)||(31531448-31531541)
chr3 (194-290)||(31826242-31826338)
chr3 (218-311)||(39931910-39932003)
chr3 (223-315)||(12236308-12236400)
chr3 (227-307)||(21864331-21864410)
chr3 (92-183)||(11345477-11345568)
chr3 (124-185)||(29645479-29645540)
chr3 (120-184)||(3475606-3475670)
chr3 (196-287)||(44647829-44647920)
chr3 (207-316)||(54555897-54556006)
chr3 (296-381)||(5504604-5504689)
chr3 (283-322)||(23157113-23157152)
chr3 (272-301)||(34056021-34056050)
chr3 (207-260)||(44698493-44698546)
chr3 (286-315)||(53717578-53717607)
chr3 (144-184)||(6719289-6719329)
chr3 (284-316)||(11393946-11393978)
chr3 (252-312)||(31650683-31650743)
[»] chr7 (68 HSPs)
chr7 (94-381)||(4089359-4089645)
chr7 (121-388)||(48767517-48767785)
chr7 (111-381)||(48610013-48610281)
chr7 (121-381)||(1324668-1324927)
chr7 (119-371)||(37673707-37673959)
chr7 (120-381)||(49100631-49100896)
chr7 (123-381)||(10685044-10685302)
chr7 (120-322)||(21388261-21388463)
chr7 (121-381)||(36726057-36726318)
chr7 (123-323)||(35128402-35128603)
chr7 (200-381)||(36116281-36116462)
chr7 (123-316)||(19235952-19236147)
chr7 (94-381)||(2276437-2276722)
chr7 (93-373)||(18121901-18122179)
chr7 (164-345)||(21809575-21809756)
chr7 (100-316)||(26632871-26633087)
chr7 (194-345)||(25750364-25750515)
chr7 (195-323)||(40263729-40263857)
chr7 (124-298)||(47458075-47458248)
chr7 (123-345)||(21800944-21801165)
chr7 (120-315)||(29635925-29636119)
chr7 (124-317)||(42983502-42983695)
chr7 (120-350)||(20123441-20123666)
chr7 (124-316)||(6376020-6376213)
chr7 (138-312)||(28663784-28663957)
chr7 (123-381)||(29723421-29723678)
chr7 (194-316)||(37048060-37048181)
chr7 (138-315)||(40740976-40741154)
chr7 (123-323)||(33181313-33181511)
chr7 (193-316)||(48193640-48193764)
chr7 (227-312)||(31373689-31373774)
chr7 (145-350)||(23876028-23876233)
chr7 (227-378)||(43465134-43465286)
chr7 (136-312)||(46783742-46783917)
chr7 (206-316)||(5334365-5334475)
chr7 (193-312)||(37491576-37491695)
chr7 (195-309)||(10408527-10408641)
chr7 (94-269)||(21759792-21759967)
chr7 (148-346)||(27162815-27163012)
chr7 (195-312)||(35960407-35960525)
chr7 (196-312)||(21392853-21392969)
chr7 (206-312)||(26200938-26201044)
chr7 (200-309)||(27213519-27213628)
chr7 (193-291)||(24700653-24700751)
chr7 (163-297)||(28038815-28038950)
chr7 (218-315)||(43601147-43601243)
chr7 (166-278)||(13907673-13907785)
chr7 (138-269)||(37136253-37136385)
chr7 (254-316)||(40211295-40211357)
chr7 (195-312)||(27170041-27170157)
chr7 (123-315)||(44648607-44648796)
chr7 (195-269)||(38729650-38729724)
chr7 (229-312)||(21752557-21752640)
chr7 (195-296)||(2409872-2409973)
chr7 (227-312)||(42993179-42993264)
chr7 (250-350)||(10595113-10595211)
chr7 (144-251)||(19477115-19477224)
chr7 (251-312)||(4068428-4068489)
chr7 (122-183)||(8318689-8318750)
chr7 (260-316)||(41672591-41672647)
chr7 (145-269)||(29993085-29993211)
chr7 (196-255)||(39102739-39102798)
chr7 (331-381)||(25099003-25099053)
chr7 (234-312)||(29993004-29993082)
chr7 (106-183)||(5333769-5333846)
chr7 (235-316)||(19477411-19477496)
chr7 (349-381)||(20123660-20123692)
chr7 (193-237)||(20124291-20124335)
[»] chr2 (92 HSPs)
chr2 (109-381)||(9718045-9718317)
chr2 (122-381)||(44424555-44424812)
chr2 (121-381)||(15851491-15851752)
chr2 (94-384)||(17663581-17663871)
chr2 (106-316)||(27297602-27297812)
chr2 (121-381)||(8064958-8065217)
chr2 (120-374)||(31644327-31644580)
chr2 (120-347)||(37355030-37355258)
chr2 (121-381)||(41665671-41665928)
chr2 (122-315)||(3237749-3237934)
chr2 (111-381)||(17250835-17251106)
chr2 (94-316)||(20362008-20362229)
chr2 (124-359)||(34329984-34330217)
chr2 (120-381)||(28733785-28734044)
chr2 (122-352)||(1246298-1246529)
chr2 (123-381)||(41865676-41865933)
chr2 (122-316)||(24774890-24775084)
chr2 (122-321)||(7255621-7255818)
chr2 (92-316)||(247685-247909)
chr2 (94-312)||(40345934-40346157)
chr2 (111-313)||(4758054-4758256)
chr2 (125-377)||(13534379-13534621)
chr2 (193-350)||(11459144-11459301)
chr2 (123-316)||(14420702-14420894)
chr2 (129-316)||(2521193-2521380)
chr2 (124-322)||(7278501-7278699)
chr2 (207-381)||(35178764-35178938)
chr2 (160-350)||(45214716-45214906)
chr2 (123-312)||(11071697-11071887)
chr2 (123-384)||(38449601-38449862)
chr2 (126-311)||(38981961-38982146)
chr2 (196-322)||(43650053-43650179)
chr2 (158-350)||(28264875-28265065)
chr2 (122-323)||(2048716-2048915)
chr2 (194-378)||(3326687-3326871)
chr2 (145-312)||(43709948-43710115)
chr2 (195-304)||(2131794-2131903)
chr2 (111-313)||(23464711-23464911)
chr2 (193-316)||(375302-375425)
chr2 (122-257)||(534549-534684)
chr2 (193-319)||(25731143-25731269)
chr2 (120-310)||(3645354-3645540)
chr2 (89-312)||(45150595-45150812)
chr2 (224-313)||(26512099-26512188)
chr2 (139-312)||(32677504-32677678)
chr2 (138-255)||(44274420-44274538)
chr2 (120-228)||(27749580-27749688)
chr2 (218-381)||(44421409-44421572)
chr2 (248-316)||(4033606-4033674)
chr2 (193-312)||(6275524-6275643)
chr2 (214-314)||(14527650-14527750)
chr2 (193-312)||(21012882-21013001)
chr2 (137-291)||(43119267-43119424)
chr2 (148-312)||(44101401-44101563)
chr2 (218-315)||(8393234-8393331)
chr2 (194-323)||(35241666-35241795)
chr2 (218-315)||(36846781-36846878)
chr2 (218-315)||(44462563-44462660)
chr2 (204-312)||(16808791-16808899)
chr2 (204-312)||(16848072-16848180)
chr2 (206-316)||(42250849-42250956)
chr2 (257-316)||(4398545-4398604)
chr2 (224-319)||(29971293-29971387)
chr2 (227-316)||(35453726-35453813)
chr2 (197-312)||(8383934-8384048)
chr2 (205-313)||(28190626-28190734)
chr2 (206-313)||(2917071-2917174)
chr2 (196-316)||(2654328-2654446)
chr2 (218-283)||(12498250-12498314)
chr2 (218-315)||(15578063-15578160)
chr2 (254-315)||(44274685-44274746)
chr2 (193-253)||(35178941-35179001)
chr2 (194-289)||(6408681-6408776)
chr2 (193-264)||(20427166-20427237)
chr2 (195-278)||(36174751-36174834)
chr2 (122-185)||(44284847-44284910)
chr2 (193-315)||(7257895-7258017)
chr2 (120-260)||(41327688-41327825)
chr2 (123-184)||(4398471-4398532)
chr2 (204-312)||(13477001-13477109)
chr2 (158-243)||(38107603-38107687)
chr2 (224-315)||(6597882-6597972)
chr2 (235-298)||(12417617-12417680)
chr2 (235-298)||(12429677-12429740)
chr2 (273-345)||(27749508-27749580)
chr2 (195-264)||(20360609-20360678)
chr2 (196-308)||(36175044-36175156)
chr2 (207-295)||(11121259-11121346)
chr2 (339-381)||(23464665-23464707)
chr2 (235-308)||(43638820-43638893)
chr2 (224-316)||(12121907-12122002)
chr2 (205-269)||(30401517-30401581)
[»] chr8 (80 HSPs)
chr8 (123-386)||(57076-57339)
chr8 (106-381)||(38202863-38203138)
chr8 (106-381)||(7772472-7772746)
chr8 (124-366)||(25198264-25198505)
chr8 (123-381)||(38773236-38773495)
chr8 (123-381)||(38761244-38761504)
chr8 (123-381)||(24512054-24512313)
chr8 (159-381)||(40337115-40337337)
chr8 (93-316)||(1177013-1177237)
chr8 (193-381)||(25184990-25185178)
chr8 (93-350)||(26878586-26878843)
chr8 (93-308)||(40517773-40517988)
chr8 (92-312)||(12762871-12763090)
chr8 (92-381)||(37956082-37956363)
chr8 (122-316)||(31252542-31252736)
chr8 (120-381)||(38770072-38770333)
chr8 (90-381)||(43980438-43980727)
chr8 (122-321)||(2562615-2562816)
chr8 (120-381)||(10396115-10396374)
chr8 (122-350)||(24962252-24962480)
chr8 (120-312)||(31746291-31746482)
chr8 (123-381)||(41086936-41087191)
chr8 (124-312)||(5191438-5191626)
chr8 (145-312)||(36437530-36437698)
chr8 (94-381)||(40790749-40791035)
chr8 (146-312)||(45203787-45203953)
chr8 (124-381)||(37141686-37141943)
chr8 (121-381)||(39543546-39543809)
chr8 (120-323)||(885480-885681)
chr8 (145-316)||(14577560-14577733)
chr8 (122-310)||(43191368-43191552)
chr8 (210-381)||(16002698-16002869)
chr8 (204-323)||(14846890-14847009)
chr8 (124-312)||(30262429-30262615)
chr8 (94-314)||(45183721-45183940)
chr8 (123-322)||(17933723-17933921)
chr8 (144-314)||(36309504-36309675)
chr8 (116-345)||(45185147-45185377)
chr8 (123-307)||(34157951-34158134)
chr8 (157-317)||(7172243-7172402)
chr8 (131-313)||(37600783-37600966)
chr8 (124-317)||(31673620-31673814)
chr8 (123-372)||(1769337-1769584)
chr8 (163-346)||(12998616-12998804)
chr8 (137-312)||(22590404-22590579)
chr8 (195-350)||(24276517-24276670)
chr8 (195-293)||(23399737-23399835)
chr8 (193-316)||(3113491-3113614)
chr8 (217-323)||(14739447-14739553)
chr8 (122-312)||(40601927-40602118)
chr8 (124-293)||(23280699-23280865)
chr8 (196-316)||(25888620-25888740)
chr8 (147-312)||(34882699-34882864)
chr8 (94-261)||(40807870-40808037)
chr8 (94-215)||(3005983-3006104)
chr8 (157-269)||(14522266-14522379)
chr8 (224-314)||(44255480-44255570)
chr8 (248-381)||(16644049-16644182)
chr8 (194-306)||(35794777-35794889)
chr8 (124-269)||(45283376-45283519)
chr8 (193-319)||(41371762-41371873)
chr8 (231-322)||(34869849-34869940)
chr8 (195-293)||(2031264-2031362)
chr8 (195-269)||(10709386-10709460)
chr8 (138-261)||(14907213-14907331)
chr8 (207-269)||(33385318-33385380)
chr8 (271-316)||(14522640-14522685)
chr8 (227-311)||(12894196-12894280)
chr8 (259-315)||(14906627-14906683)
chr8 (193-316)||(35709057-35709180)
chr8 (231-313)||(3006777-3006859)
chr8 (232-309)||(41541581-41541656)
chr8 (204-261)||(7727318-7727375)
chr8 (194-315)||(43182559-43182679)
chr8 (131-216)||(4273862-4273947)
chr8 (122-185)||(2303248-2303311)
chr8 (122-185)||(2327842-2327905)
chr8 (143-231)||(10860830-10860918)
chr8 (94-185)||(16357143-16357234)
chr8 (280-315)||(45283827-45283862)
[»] chr4 (95 HSPs)
chr4 (123-381)||(25477185-25477443)
chr4 (94-381)||(46729266-46729552)
chr4 (93-381)||(22750699-22750987)
chr4 (122-383)||(51787729-51787989)
chr4 (136-382)||(20262296-20262540)
chr4 (123-381)||(39237475-39237738)
chr4 (120-363)||(24072745-24072988)
chr4 (94-384)||(12624653-12624943)
chr4 (196-381)||(5448622-5448807)
chr4 (121-316)||(43800833-43801028)
chr4 (124-322)||(41945661-41945858)
chr4 (106-371)||(48472366-48472631)
chr4 (120-316)||(33246382-33246577)
chr4 (122-370)||(54438481-54438729)
chr4 (122-381)||(16070391-16070650)
chr4 (159-384)||(52225976-52226202)
chr4 (122-298)||(40411229-40411405)
chr4 (120-381)||(52552396-52552656)
chr4 (100-350)||(52198593-52198842)
chr4 (111-315)||(22651490-22651694)
chr4 (91-376)||(50782743-50783021)
chr4 (124-350)||(30153112-30153336)
chr4 (131-377)||(32236795-32237043)
chr4 (93-301)||(20116490-20116699)
chr4 (122-316)||(43509107-43509301)
chr4 (120-323)||(34543720-34543926)
chr4 (158-323)||(54359702-54359865)
chr4 (124-319)||(5168001-5168196)
chr4 (138-312)||(39414265-39414437)
chr4 (145-315)||(20291366-20291535)
chr4 (123-345)||(37625011-37625234)
chr4 (120-312)||(51918539-51918728)
chr4 (123-323)||(5932904-5933104)
chr4 (122-315)||(26203156-26203350)
chr4 (122-316)||(38136380-38136569)
chr4 (119-381)||(5536457-5536706)
chr4 (120-311)||(39196917-39197110)
chr4 (123-319)||(44812494-44812690)
chr4 (120-316)||(10602094-10602286)
chr4 (144-316)||(29584919-29585090)
chr4 (123-298)||(31840139-31840313)
chr4 (195-316)||(20185615-20185736)
chr4 (195-312)||(41919997-41920114)
chr4 (138-312)||(7002212-7002385)
chr4 (157-316)||(14602572-14602735)
chr4 (157-316)||(13096462-13096622)
chr4 (95-298)||(21171767-21171969)
chr4 (160-312)||(56373269-56373420)
chr4 (227-316)||(37175013-37175102)
chr4 (122-313)||(20293775-20293967)
chr4 (92-312)||(31486517-31486737)
chr4 (122-316)||(19654453-19654648)
chr4 (193-291)||(56217010-56217108)
chr4 (227-315)||(31937383-31937471)
chr4 (193-309)||(52768852-52768972)
chr4 (123-278)||(31917440-31917593)
chr4 (223-316)||(45628062-45628154)
chr4 (228-316)||(28116497-28116585)
chr4 (204-311)||(41459617-41459724)
chr4 (124-322)||(3684076-3684274)
chr4 (227-309)||(5416860-5416942)
chr4 (159-298)||(34643438-34643576)
chr4 (145-312)||(10541167-10541333)
chr4 (120-313)||(52676048-52676242)
chr4 (145-304)||(20016560-20016717)
chr4 (224-298)||(26186743-26186817)
chr4 (193-269)||(21121039-21121115)
chr4 (200-283)||(20540029-20540111)
chr4 (100-216)||(20792116-20792232)
chr4 (224-278)||(30049760-30049814)
chr4 (146-312)||(32107874-32108041)
chr4 (123-323)||(54701181-54701374)
chr4 (228-312)||(20791956-20792040)
chr4 (145-254)||(48609429-48609538)
chr4 (223-302)||(30866695-30866774)
chr4 (193-312)||(52977585-52977704)
chr4 (260-314)||(3094209-3094263)
chr4 (131-185)||(31936989-31937043)
chr4 (232-293)||(36513306-36513367)
chr4 (194-270)||(726675-726751)
chr4 (194-270)||(754093-754169)
chr4 (334-381)||(43800758-43800805)
chr4 (197-298)||(45079773-45079873)
chr4 (193-262)||(3094409-3094479)
chr4 (237-312)||(18683536-18683609)
chr4 (124-184)||(30050142-30050202)
chr4 (145-185)||(56216673-56216713)
chr4 (227-278)||(26170258-26170309)
chr4 (144-252)||(31552257-31552365)
chr4 (122-169)||(39813844-39813891)
chr4 (227-265)||(25841983-25842021)
chr4 (233-307)||(31294190-31294264)
chr4 (224-261)||(3113446-3113483)
chr4 (137-185)||(30866789-30866836)
chr4 (159-260)||(49544991-49545092)
[»] chr6 (47 HSPs)
chr6 (157-381)||(5895691-5895915)
chr6 (94-323)||(1763831-1764060)
chr6 (92-381)||(19838891-19839180)
chr6 (131-309)||(34513115-34513292)
chr6 (94-316)||(31945771-31945993)
chr6 (124-323)||(30465857-30466056)
chr6 (160-381)||(9461254-9461474)
chr6 (120-379)||(16186535-16186791)
chr6 (131-323)||(16350539-16350732)
chr6 (93-351)||(11302845-11303105)
chr6 (131-313)||(16327151-16327334)
chr6 (120-350)||(6791369-6791597)
chr6 (145-312)||(12514489-12514662)
chr6 (120-345)||(15981790-15982015)
chr6 (145-313)||(28238224-28238392)
chr6 (138-312)||(33607384-33607556)
chr6 (120-316)||(22410727-22410924)
chr6 (159-310)||(3887866-3888017)
chr6 (144-312)||(31780153-31780323)
chr6 (144-312)||(5457216-5457382)
chr6 (229-312)||(10669268-10669351)
chr6 (120-257)||(30248946-30249082)
chr6 (248-322)||(3729408-3729482)
chr6 (120-316)||(31536037-31536234)
chr6 (200-313)||(31152953-31153066)
chr6 (123-313)||(197337-197529)
chr6 (267-381)||(4250690-4250804)
chr6 (115-246)||(10260483-10260615)
chr6 (194-278)||(3729485-3729569)
chr6 (145-278)||(12503518-12503656)
chr6 (194-269)||(31039218-31039293)
chr6 (227-313)||(5084530-5084615)
chr6 (223-297)||(20523016-20523090)
chr6 (194-315)||(9941048-9941169)
chr6 (227-312)||(12514747-12514832)
chr6 (229-313)||(9428195-9428279)
chr6 (145-278)||(31486972-31487107)
chr6 (227-287)||(6418956-6419016)
chr6 (145-312)||(7365517-7365682)
chr6 (195-267)||(8644755-8644827)
chr6 (259-311)||(30248593-30248645)
chr6 (213-260)||(11082152-11082199)
chr6 (224-257)||(7595583-7595616)
chr6 (143-184)||(10669198-10669239)
chr6 (139-180)||(12503397-12503438)
chr6 (139-180)||(12514368-12514409)
chr6 (240-312)||(1514233-1514305)
[»] chr5 (74 HSPs)
chr5 (93-381)||(39690342-39690630)
chr5 (122-381)||(36177252-36177512)
chr5 (125-381)||(3247160-3247418)
chr5 (93-381)||(34877626-34877914)
chr5 (122-376)||(3631003-3631257)
chr5 (123-381)||(5845136-5845394)
chr5 (121-381)||(4738590-4738849)
chr5 (90-381)||(25017524-25017818)
chr5 (124-322)||(3558914-3559112)
chr5 (122-368)||(9946242-9946489)
chr5 (145-381)||(10933966-10934201)
chr5 (122-316)||(35568890-35569084)
chr5 (125-367)||(40979098-40979342)
chr5 (94-350)||(27642493-27642749)
chr5 (124-323)||(36347488-36347687)
chr5 (122-312)||(29866218-29866408)
chr5 (120-316)||(21912145-21912341)
chr5 (125-323)||(15898350-15898549)
chr5 (126-381)||(27798116-27798371)
chr5 (193-381)||(21574837-21575024)
chr5 (194-316)||(10523231-10523353)
chr5 (118-313)||(4857374-4857570)
chr5 (167-323)||(12895139-12895295)
chr5 (144-356)||(20946072-20946284)
chr5 (122-300)||(36750661-36750839)
chr5 (123-304)||(5151087-5151267)
chr5 (143-316)||(38972033-38972205)
chr5 (193-381)||(27587798-27587986)
chr5 (161-312)||(16039-16190)
chr5 (118-310)||(30347964-30348150)
chr5 (124-315)||(19281376-19281569)
chr5 (93-313)||(43454010-43454229)
chr5 (138-269)||(7736052-7736183)
chr5 (195-323)||(25690644-25690775)
chr5 (122-316)||(18729613-18729811)
chr5 (158-278)||(8717880-8718000)
chr5 (193-316)||(42644434-42644557)
chr5 (194-316)||(11980741-11980863)
chr5 (138-291)||(34676171-34676325)
chr5 (208-316)||(43060482-43060589)
chr5 (204-297)||(30317793-30317886)
chr5 (144-312)||(4745156-4745326)
chr5 (249-381)||(15967124-15967257)
chr5 (194-315)||(731908-732031)
chr5 (194-312)||(600794-600912)
chr5 (92-252)||(31641045-31641207)
chr5 (121-269)||(32401339-32401486)
chr5 (229-312)||(41521217-41521300)
chr5 (195-297)||(16496480-16496582)
chr5 (209-298)||(9375611-9375700)
chr5 (144-313)||(16969402-16969570)
chr5 (224-315)||(24781256-24781346)
chr5 (94-185)||(27925429-27925520)
chr5 (159-316)||(129635-129787)
chr5 (123-184)||(20975691-20975752)
chr5 (145-298)||(10656633-10656785)
chr5 (194-288)||(556054-556148)
chr5 (195-304)||(5764181-5764290)
chr5 (232-297)||(19089016-19089081)
chr5 (94-185)||(7510695-7510786)
chr5 (91-181)||(25690507-25690597)
chr5 (252-322)||(31642484-31642553)
chr5 (227-313)||(3529906-3529991)
chr5 (194-310)||(14044455-14044571)
chr5 (331-381)||(27925337-27925387)
chr5 (193-242)||(29874257-29874306)
chr5 (197-257)||(32068070-32068131)
chr5 (280-316)||(7510631-7510667)
chr5 (137-185)||(33583997-33584045)
chr5 (88-182)||(29874465-29874560)
chr5 (267-322)||(33862845-33862900)
chr5 (206-312)||(457800-457908)
chr5 (263-312)||(32067857-32067906)
chr5 (272-316)||(29874203-29874247)
[»] scaffold1091 (1 HSPs)
scaffold1091 (91-381)||(1768-2058)
[»] scaffold0038 (1 HSPs)
scaffold0038 (145-313)||(38386-38554)
[»] scaffold0012 (1 HSPs)
scaffold0012 (197-307)||(99778-99888)
[»] scaffold0013 (2 HSPs)
scaffold0013 (145-315)||(49162-49332)
scaffold0013 (145-315)||(61191-61361)
[»] scaffold0005 (1 HSPs)
scaffold0005 (157-316)||(214643-214806)
[»] scaffold0182 (2 HSPs)
scaffold0182 (218-382)||(22024-22183)
scaffold0182 (238-312)||(18718-18792)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-269)||(25771-25929)
[»] scaffold0121 (2 HSPs)
scaffold0121 (124-251)||(24149-24276)
scaffold0121 (331-384)||(24092-24145)
[»] scaffold0699 (1 HSPs)
scaffold0699 (218-315)||(7604-7700)
[»] scaffold0166 (1 HSPs)
scaffold0166 (224-315)||(23639-23729)
[»] scaffold0116 (1 HSPs)
scaffold0116 (209-297)||(5866-5954)


Alignment Details
Target: chr1 (Bit Score: 287; Significance: 1e-161; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 392
Target Start/End: Complemental strand, 33232188 - 33231788
Alignment:
Q  1 atgtatctatcccagctcattttctgaatcatatggtaacatcatatatattcatcagttcatgtaaaaacaacattatataatcttcctaa-------- 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||            
T  33232188 atgtatctatcccagctcattttctgaatcatatggtaacatcatatatattcataagttcgtgtaaaaacaacattatataatcttcctaatcttccta 33232089  T
Q  93 -atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
     ||||||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||          
T  33232088 aatactcgctcctcccttatatgtaaatacccatttgattttacttttgtccctaaatataaattcattttcaaattactagatgcatttattatttttt 33231989  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33231988 tcctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaaggacaatttcgtaatattaaca 33231889  T
Q  292 cacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacatctttgat 391  Q
    ||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33231888 cacaaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacatcttagat 33231789  T
Q  392 g 392  Q
    |    
T  33231788 g 33231788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 94 - 382
Target Start/End: Original strand, 5084946 - 5085234
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||  ||||||||||||||| |||||| ||||||| ||||  |||||||||||||||||||||||||||||       |    
T  5084946 tactccctccgtccctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattatttttttc 5085045  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  5085046 ctaaacatacccctaattaatactactatcttctcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaacaca 5085145  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    ||||||||||||||||||||||| ||||||       || |||||||||||||||||||| || |||||||||||||||||||||||||    
T  5085146 caaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggtgcctacattaagggacggagggagtac 5085234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 106 - 382
Target Start/End: Complemental strand, 16582769 - 16582491
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn---cctaaacata 202  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||| |    
T  16582769 ccctatatgtaaacacccatttgattttacttttgttcctaaatataaatttcttttcaaattactagatgcatttattattattattttcctaaacaca 16582670  T
Q  203 cccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacaga 302  Q
    ||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  16582669 ccc-taattaatatcactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttcgtaatattaacacacaaaacaga 16582571  T
Q  303 cacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    |||||||||||||| ||||||       |||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  16582570 cacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatggatggctacattaaggaacagagggagtac 16582491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 106 - 378
Target Start/End: Original strand, 48721738 - 48722010
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| ||| |||| ||| ||||||||||| |||||| ||||||| |||    ||||||||||||||||||||||||||||       |||||||||||||    
T  48721738 ccctatatctaaacacctatttgattttatttttgtccctaaatgtaaccctcttttcaaattactagatgcatttattatttttt-cctaaacataccc 48721836  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48721837 ctaattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagacac 48721936  T
Q  306 attaattacaccgacaacnnnnnnnaagaaatgtg-aaaaaggcaatggatggctacattaagggacggaggga 378  Q
    ||||||||||| |||| |       |||||||||| ||||||||||||| || |||||||||||||||||||||    
T  48721937 attaattacactgacagcttttcttaagaaatgtgaaaaaaggcaatgggtgcctacattaagggacggaggga 48722010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 115 - 374
Target Start/End: Complemental strand, 25269601 - 25269343
Alignment:
Q  115 taaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaat 214  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||       | ||||||||||||||||||||    
T  25269601 taaatacccatttgattttacttttgttcctaaatataaaccccttttcaaattactagatgcatttattacttttt-cttaaacatacccctaattaat 25269503  T
Q  215 accactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    | || ||||||| || |||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||    
T  25269502 atcattatcttgcctcgaaatatgaaaagtcaaatttaatacacatacaaacaaaggaaaatttcgtaatattaacacataaaacagacacattatttac 25269403  T
Q  315 accgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacgga 374  Q
    || ||||||       || ||||||||||||| ||||||||||| |||||||| ||||||    
T  25269402 actgacaacttttcttaaaaaatgtgaaaaagacaatggatggcaacattaagagacgga 25269343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 111 - 381
Target Start/End: Original strand, 29140531 - 29140798
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaat 210  Q
    |||| ||| |||||||| ||||||||||||| | ||||| ||||  |||||| |||||| |||||| |||| ||         |||||||||||||||||    
T  29140531 tatgcaaacacccatttaattttacttttgtccttaaatgtaaacccctttttaaattattagatgtatttttttttctt---ctaaacatacccctaat 29140627  T
Q  211 taataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  29140628 taataccactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatattaatacacaaaacagacacattaa 29140727  T
Q  311 ttacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||| ||||       ||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  29140728 ttacaccggcaacttttcttaagaaatgtgaaaaaggcaatagatgactacattaaaggacggagggagta 29140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 94 - 381
Target Start/End: Original strand, 5321879 - 5322167
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| | | |||| ||||||||||||||| |||||| ||||||| ||||  ||||||||||||||||||| |||||||||       |    
T  5321879 tactccctccgtccctatgtctaaacacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatacatttattatttttttc 5321978  T
Q  194 c-taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    | |||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||| |||||    
T  5321979 cctaaacatacccctagttaatactactatcttgtcttgaaatatgaaaagtcaattttaatacatatacaaacaaataacaatttcgtaatataaacac 5322078  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||||||||||||||||  || |||       || |||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  5322079 acaaaacagacacattaattacattgataacttttcttaaaaaatatgaaaaaggcaatagatgcctacattaagggacggagggagta 5322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 122 - 381
Target Start/End: Original strand, 34696768 - 34697027
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||| ||||||||       |||||||||  ||||||||||||| ||||    
T  34696768 ccatttgattttatttttgttcctaaatgtaaaccccttttcaaattactagatgtatttattatttttttcctaaacatgtccctaattaatactacta 34696867  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    | ||||||||||||| ||||||||| |||| || ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  34696868 ttttgtcttgaaataggaaaagtcaaatttcatgcacatacaaacaaatgacaatttcgtaatattaacacacaaaacagacatattaattacactgaca 34696967  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||       || ||||||||||||| || |||||  ||||||||||||||||||||||||    
T  34696968 acttttcttaaaaaatgtgaaaaagacagtggatccctacattaagggacggagggagta 34697027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 381
Target Start/End: Original strand, 15512637 - 15512925
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||           
T  15512637 atactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattatttt 15512736  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||| | ||||  |||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  15512737 cctaaacatacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacac 15512836  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | |||| ||||||||||| |||||  |||||       ||||||||||||||| |||| ||  || |||||  ||||||||||||||||    
T  15512837 ataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagta 15512925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 381
Target Start/End: Original strand, 28948820 - 28949108
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||           
T  28948820 atactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattatttt 28948919  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||| | ||||  |||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  28948920 cctaaacatacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacac 28949019  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | |||| ||||||||||| |||||  |||||       ||||||||||||||| |||| ||  || |||||  ||||||||||||||||    
T  28949020 ataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagta 28949108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 93 - 381
Target Start/End: Complemental strand, 3143651 - 3143362
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| ||| |||  ||||||||||||||| |||||| ||||||| || |  |||||||||||||  ||||||||||||||           
T  3143651 atactctctccgtccctatatttaagcacccatttgattttatttttgtccctaaatgtacaccccttttcaaattatcagatgcatttattattatttt 3143552  T
Q  193 c-ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
      | ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||| ||||||||||||    
T  3143551 ttccaaacatacccctaattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaagacaattttgtaatattaaca 3143452  T
Q  292 cacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||| |||||||||||||||||  ||||||       ||||||||||||||| ||||||| || |||||||||||||| |||||||||    
T  3143451 cacaaagcagacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacagagggagta 3143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 100 - 362
Target Start/End: Original strand, 28334083 - 28334340
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaa 198  Q
    ||||| |||| |||||||| |||||||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||||         ||||||    
T  28334083 ctccgtccctatatgtaaacacccatttgattttacttttgtccctaaatgtaaaccccttttcaaattactagatgcatttatttttatttttcctaaa 28334182  T
Q  199 catacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||| |||||||||||||| || ||||| |||||||||      ||||||||||||    
T  28334183 catacccctaattaataccactatcttgccttaaaatatgaaaattcaaatttaatacacatataagcaaaggacaatttcg------taacacacaaaa 28334276  T
Q  299 cagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctaca 362  Q
    |||||||||||||||||| ||||||       |||||||||||||||| |||||| || |||||    
T  28334277 cagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgggtgactaca 28334340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 164 - 381
Target Start/End: Original strand, 44652788 - 44653002
Alignment:
Q  164 aaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacataca 263  Q
    |||||| |||||||||||||||       |||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  44652788 aaattattagatgcatttattatttttttcctaaacatacccctaattaatactactaacttgttttgaaatatgaaaagtcaaatttaatacacataca 44652887  T
Q  264 aacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacat 363  Q
    ||||||||||||| | |||||||||| ||||||||||||||||||||||||||    |||       |||||||||||||| ||||||| ||||||||||    
T  44652888 aacaaagaacaatgtggtaatattaaaacacaaaacagacacattaattacac---taacatttcttaagaaatgtgaaaatggcaatgaatggctacat 44652984  T
Q  364 taagggacggagggagta 381  Q
    ||| ||||||||||||||    
T  44652985 taaaggacggagggagta 44653002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 124 - 383
Target Start/End: Complemental strand, 8877986 - 8877729
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||||| ||||| |||| |  |||||||||||||||||||||||||||         |||||||||||||||||||||| ||||||    
T  8877986 atttgatttta-ttttgttcttaaatgtaaacta-ttttcaaattactagatgcatttattatttttttaataaacatacccctaattaatactactatc 8877889  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    || ||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| || |||||     
T  8877888 ttatcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattatactgacaat 8877789  T
Q  324 nnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtaca 383  Q
           || |||| ||||||||||||||  || ||||||||| |||||||| |||||||    
T  8877788 ttttcttaaaaaatatgaaaaaggcaatgagtgtctacattaaaggacggagagagtaca 8877729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 129 - 379
Target Start/End: Complemental strand, 32047651 - 32047403
Alignment:
Q  129 attttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtc 228  Q
    |||||| |||| | ||||||| ||||  | ||||||||||||| |||||||||||||       | ||||||||||||||| |||||| |||||||||||    
T  32047651 attttatttttatccctaaatgtaaaccctttttcaaattacttgatgcatttattatttttt-cttaaacatacccctaaataatactactatcttgtc 32047553  T
Q  229 ttgaaatatgaaaa-gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnn 327  Q
    |||||||||||||| |||| ||||||  ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||||        
T  32047552 ttgaaatatgaaaaagtcaaatttaa--cacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacacattaattacactgacaactttt 32047455  T
Q  328 nnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggag 379  Q
       ||||||||||||||| ||||||| || ||||||||||||||||||||||    
T  32047454 cttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacggagggag 32047403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 124 - 311
Target Start/End: Complemental strand, 3831263 - 3831076
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| ||||||| ||||  |||||||||||||||||||||||||||||       |||||||||| |||||||||||||  |||||    
T  3831263 atttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattaattttttcctaaacatatccctaattaatacttctatc 3831164  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||    
T  3831163 ttgtcttgaaatatgaaaagtcaaatttaacatacatacaaacaaatgacaatttcgtaatattaacacacaaaatagatacattaat 3831076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 123 - 372
Target Start/End: Complemental strand, 36085187 - 36084938
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||| |||||| |||||| ||||||| |||||   |||||||||||||||||||||||||||       | |||||||||||||||||||||| | |||    
T  36085187 catttaattttatttttgtccctaaatgtaaatcttttttcaaattactagatgcatttattatttttttcttaaacatacccctaattaatactattat 36085088  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||| |||||||||||||| | |||||||||||||||||| |||| | |||||| |||||||||||||||||||||| ||||||||||||| || ||    
T  36085087 cttgtctcgaaatatgaaaagttaaatttaatacacatacaaataaaggataatttcttaatattaacacacaaaacagatacattaattacactgataa 36084988  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacg 372  Q
            || ||||||||||||| |||||  || |||||||||||||||    
T  36084987 tttttcttaaaaaatgtgaaaaagacaatgattgcctacattaagggacg 36084938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 106 - 309
Target Start/End: Complemental strand, 25063446 - 25063241
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcat--ttattannnnnnncctaaacatac 203  Q
    |||| |||||||  ||||||||||||||| |||||| | ||||| |||| |||||||||||||||||||| |||  ||||||       |||||||||||    
T  25063446 ccctatatgtaaccacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatacatatttattatttttttcctaaacatac 25063347  T
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||||||||| | |||| |||||| ||||||||||||||| | ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  25063346 ccctaattaatcctactaacttgtcgtgaaatatgaaaagtgaaatttaatacacatacaaacaaaggacaattaggtaatattaacacacaaaacagac 25063247  T
Q  304 acatta 309  Q
    ||||||    
T  25063246 acatta 25063241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 30898419 - 30898648
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||| | |||| ||| ||| |||| ||||||||||| |||||||||||||| ||||  | |||||||||||| |||| |||||||||           
T  30898419 atactccctctgtccctatatctaagtacctatttgattttatttttgttcctaaatgtaaaccctttttcaaattaccagatacatttattattttttt 30898518  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||| ||||| | |||| ||| |||| ||||||||| ||||| ||||||||||||||||||||||| | ||||| |||||||||||||    
T  30898519 cctaaacatacccctatttaatgctactaacttatcttaaaatatgaatagtcacatttaatacacatacaaacaaaggataatttggtaatattaacac 30898618  T
Q  293 acaaaacagacacattaattacaccgacaa 322  Q
    | |||||||||||||||||||||| |||||    
T  30898619 ataaaacagacacattaattacactgacaa 30898648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 115 - 384
Target Start/End: Complemental strand, 47643765 - 47643499
Alignment:
Q  115 taaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaat 214  Q
    |||| ||||||||||||||| |||||| | ||||| ||||  ||||| |||||||||||||||||||||||          |||||||||| ||||||||    
T  47643765 taaacacccatttgattttatttttgtccataaatgtaaacccctttccaaattactagatgcatttattattattttttaaaacatacccttaattaat 47643666  T
Q  215 accactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    || |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||| ||||||||||||||  ||||| |||||||||||||    
T  47643665 actactaacttgtcttgaaatttgaaaagtcaaatttaatacacatgcaaacaaaggacaatttagtaatattaacaca--aaacatacacattaattac 47643568  T
Q  315 accgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacat 384  Q
    || ||||||       ||||||||||||||||  || ||| |  ||||||||||||||||| ||||||||    
T  47643567 actgacaacttttcttaagaaatgtgaaaaagcaaaggga-gtttacattaagggacggagagagtacat 47643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 193 - 382
Target Start/End: Original strand, 9675623 - 9675812
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||  | |||||| | |||||||||||| ||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  9675623 cctaaacatacccctaattaatattattatcttattttgaaatatgaatagtcaaatttaatacacatacaaataaaggacaatttcgtaatattaacac 9675722  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    ||||| |||||| ||||||||||| ||||||       |||||| || |||||| |||||| || ||||||||||||||||| |||||||    
T  9675723 acaaatcagacaaattaattacactgacaacttttcttaagaaacgtaaaaaagtcaatgggtgcctacattaagggacggatggagtac 9675812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 193 - 345
Target Start/End: Complemental strand, 32152305 - 32152153
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||| ||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||    
T  32152305 cctaaacatacccctaattaatactactaacttatcttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttggtaatattaacac 32152206  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    |||||| ||||||||||||| |||| |||||       |||||||||||||||    
T  32152205 acaaaatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 93 - 312
Target Start/End: Original strand, 51390394 - 51390609
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||  |||| ||| |||| |||||||||| |||| |||||| ||||||| ||||  |||||| ||||||||||||||||||||||           
T  51390394 atactccctccatccctatatctaaacacccatttgactttaattttgtccctaaatgtaaacccctttttaaattactagatgcatttattatttttt- 51390492  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||||| ||||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||   ||||||    
T  51390493 cctaaacatacccttaattaaaactactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaa---taacac 51390589  T
Q  293 acaaaacagacacattaatt 312  Q
    |||||| |||||||||||||    
T  51390590 acaaaatagacacattaatt 51390609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 120 - 323
Target Start/End: Complemental strand, 51997176 - 51996972
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||   |||||||||||||| | ||||||||||||       ||||||||||| | |||||||||| ||    
T  51997176 acccatttgattttatttttgtccctaaatgtaatccccttttcaaattacaatatgcatttattatttttttcctaaacatactcttaattaatactac 51997077  T
Q  220 tatcttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
    || |||||||| ||||| |||||||||| ||||||||||||||||||||||| || |||| |||||||||||||| |||||| ||| ||||||||||| |    
T  51997076 taacttgtctttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacgatttggtaatattaacacagaaaacatacaaattaattacactg 51996977  T
Q  319 acaac 323  Q
    |||||    
T  51996976 acaac 51996972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 381
Target Start/End: Complemental strand, 30336205 - 30336018
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||| ||||||||||||| |||| ||| |||||||||||||||| ||| |||| |||| |||| |||||||| ||||||| ||||||||||||||    
T  30336205 ctaaacatatccctaattaatactactaacttatcttgaaatatgaaaattcaaattttatacgcatagaaacaaaggacaatttggtaatattaacaca 30336106  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||| ||||||||||||||||||||||||       ||||||||||||||| ||||||  || |||||||| |||||  ||||||||    
T  30336105 caaaatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaagcaatgagtgtctacattatgggaccaagggagta 30336018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 8984583 - 8984740
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    |||||||||||||||||||||||||||        ||||||| ||||| |||||||||| ||||  || |||||||||||||||||||| ||||||||||    
T  8984583 cttttcaaattactagatgcatttattttatttttcctaaacttaccc-taattaatactactaatttatcttgaaatatgaaaagtcaaatttaataca 8984681  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||    
T  8984682 catacaaacaaatgacaatttagtaatattaacacacaaaacagacacattaattacac 8984740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 345
Target Start/End: Original strand, 4817789 - 4818012
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| | ||||| |||| || ||| |||||||||||||| ||||||||       | ||||||||| | |||||||||| ||    
T  4817789 acccatttgattttatttttgtccttaaatgtaaactcatttccaaattactagatgtatttattattttgttcttaaacatactcttaattaatactac 4817888  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || ||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||  ||||||||| |||||||||  ||||| ||||||||||||    
T  4817889 taacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacacaaaac--acacaataattacaccga 4817986  T
Q  320 caacnnnnnnnaagaaatgtgaaaaa 345  Q
    ||||       |||||||||||||||    
T  4817987 caacttttcttaagaaatgtgaaaaa 4818012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 345
Target Start/End: Original strand, 4829589 - 4829812
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| | ||||| |||| || ||| |||||||||||||| ||||||||       | ||||||||| | |||||||||| ||    
T  4829589 acccatttgattttatttttgtccttaaatgtaaactcatttccaaattactagatgtatttattattttgttcttaaacatactcttaattaatactac 4829688  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || ||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||  ||||||||| |||||||||  ||||| ||||||||||||    
T  4829689 taacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaatacacaaaac--acacaataattacaccga 4829786  T
Q  320 caacnnnnnnnaagaaatgtgaaaaa 345  Q
    ||||       |||||||||||||||    
T  4829787 caacttttcttaagaaatgtgaaaaa 4829812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 122 - 316
Target Start/End: Original strand, 52141060 - 52141256
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||||| |||| |||||||||||| |||||||||||||||||       |||||||||| ||||| ||||||  ||||    
T  52141060 ccatttgattttatttttgtccctaaatgtaaactccttttcaaatcactagatgcatttattatttttttcctaaacatatccctagttaatattacta 52141159  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagaca--cattaattacac 316  Q
     |||||||| |||||| |||||||| ||||||||||||||||||||||  | |||||  |||||||||||||||||| |||||  ||||||||||||    
T  52141160 acttgtcttaaaatataaaaagtcaaatttaatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacgcattaattacac 52141256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 157 - 350
Target Start/End: Original strand, 23982512 - 23982705
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||| |||||| |||||||||       |||||||||| ||||||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  23982512 ccttttcaaattgctagatacatttattattattttcctaaacatatccctaattaatactactaacttatcttgaaatatgaaaagtcaaatttaatac 23982611  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    | |||||||||||   ||||||  |||||||||||||||||||||||||||||||||||  ||||||       ||||||||||||||| ||||    
T  23982612 atatacaaacaaatgtcaatttgataatattaacacacaaaacagacacattaattacattgacaacttttcttaagaaatgtgaaaaatgcaa 23982705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 124 - 316
Target Start/End: Original strand, 28723537 - 28723732
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactat 222  Q
    ||||||||||| |||||| | ||||||||||   ||||||||||||||||||||| ||||||        |||||||||||||||||||||||  || |     
T  28723537 atttgattttatttttgtccttaaatataaacatcttttcaaattactagatgcagttattattatttttcctaaacatacccctaattaatattaccaa 28723636  T
Q  223 cttgtcttgaaatat--gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||| |||||||||||||||||    
T  28723637 cttgtcttgaaatatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaatagacacattaattacac 28723732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 4813362 - 4813537
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaata 236  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||||        ||||||||||  ||||||||||||  ||| ||| | ||||||||    
T  4813362 ttgtccctaaatataaaccccttttcaaattactagatgcatttattattttttttcctaaacatattcctaattaatacggctaacttattttgaaata 4813461  T
Q  237 tgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  4813462 tgaaaagtcaaatttaacacacatacaaacaaagaataatttggtaatattaacacacaaaatagacacattaatt 4813537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 13145601 - 13145448
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||||||||||| ||| ||||       |||||||||||||||||||||||  |||| ||| |||| ||||||||||||||| ||||||| |    
T  13145601 ccttttcaaattactagatgtattaattatttttttcctaaacatacccctaattaatattactaacttatcttaaaatatgaaaagtcaaatttaatgc 13145502  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||| |||||    
T  13145501 acatacaaacaaaggacaatttggtaatattaacatacaaaacagacatattaa 13145448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 124 - 322
Target Start/End: Complemental strand, 46495525 - 46495327
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| | ||||| ||||| | |||| ||||||| ||||||||||||||       ||||| ||||| | |||||||||| | || |    
T  46495525 atttgattttatttttgtccgtaaatgtaaatccttttttaaattacaagatgcatttattatttttt-cctaagcatacgcttaattaatactattaac 46495427  T
Q  224 ttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||| ||||| |||||||||| |||||||| ||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  46495426 ttgtctttgaaatttgaaaagtcaaatttaatatacatacaaataaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaa 46495327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 122 - 322
Target Start/End: Complemental strand, 15179628 - 15179428
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccact 220  Q
    |||||| |||||| |||||||| ||||| ||||  |||||| |||||| |||||||||||||||         | ||||||| ||||||||||| | |||    
T  15179628 ccattttattttatttttgttcataaatgtaaaa-cctttttaaattattagatgcatttattattatattttttaaacatatccctaattaatcctact 15179530  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||| || || |||| ||||||||||||||||| |||    
T  15179529 aacttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaaggacaattttgtaatatttacgcataaaatagacacattaattacactgac 15179430  T
Q  321 aa 322  Q
    ||    
T  15179429 aa 15179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 47070921 - 47071040
Alignment:
Q  197 aacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaa 296  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||| ||| ||||||||| ||||||||||||  ||||||| |||||||||||||| ||    
T  47070921 aacatacctctaattaatactactaacttgtcttgaaatatgaaaaatcaaatttaatacgcatacaaacaaatgacaatttggtaatattaacacataa 47071020  T
Q  297 aacagacacattaattacac 316  Q
    || |||||||||||||||||    
T  47071021 aatagacacattaattacac 47071040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 381
Target Start/End: Complemental strand, 10160892 - 10160678
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    ||||||||||||||||||| |||||||       ||||||||||||| |||||||||| | ||| || |||||||||||||||||||| |||||||||||    
T  10160892 ttttcaaattactagatgcgtttattatttttttcctaaacataccc-taattaatactattatattatcttgaaatatgaaaagtcaaatttaatacac 10160794  T
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggc 358  Q
    |||||||||||  |  ||||| ||||||||||        |||||||||||||||||| || |||       |||||||||||||||||||| ||||| |    
T  10160793 atacaaacaaatgaatatttcataatattaac-------gcagacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaacggatgcc 10160701  T
Q  359 tacattaagggacggagggagta 381  Q
    || ||||||||| ||||||||||    
T  10160700 tatattaagggatggagggagta 10160678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 25258548 - 25258358
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||| |||||| |||||||| ||||| ||||||| |||||||||||| ||||||||||||||       | ||||||||| |||||||||||| ||||    
T  25258548 ccatttaattttatttttgttcttaaatgtaaattcattttcaaattacaagatgcatttattatttttttc-taaacatactcctaattaatactacta 25258450  T
Q  222 tcttgtcttgaaatatgaaaa-gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
      |||| |||||| ||||||| || | ||||||||||||||||||||||| ||||||| ||||||| || ||| |||| |||||||||||||    
T  25258449 aattgttttgaaacatgaaaaagttaaatttaatacacatacaaacaaaggacaatttggtaatatcaagacataaaatagacacattaatt 25258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 145 - 316
Target Start/End: Complemental strand, 20564972 - 20564799
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    ||||||||||  | ||||||||||||||||||||||| |||         |||||||||||  ||||||||||| |||| ||||||||||||||||||||    
T  20564972 taaatataaaacctttttcaaattactagatgcatttgttattatttttccctaaacatacatctaattaatactactaacttgtcttgaaatatgaaaa 20564873  T
Q  243 gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| ||||||||||||| ||||||||  ||||||| |||||||||||||| |||  |||||||||| ||||||    
T  20564872 gtcaaatttaatacacattcaaacaaaagacaattttgtaatattaacacataaagtagacacattagttacac 20564799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 34102453 - 34102361
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  34102453 cttgtcttgaaatatgaaaagtcaaatttaataaacatacaaacaaagaataatttgataatattaacacacaaaacagacacattaattaca 34102361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 46591283 - 46591126
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    |||||||||||||||||| ||||||||       || ||| | ||||||||||||||  |||| ||||||||||||| |||||| ||| |||||||||||    
T  46591283 ttttcaaattactagatgtatttattatctttttcccaaatacacccctaattaatattactaacttgtcttgaaatttgaaaaatcaaatttaatacac 46591184  T
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||| |||||||| ||||||   |||||||||||||||||||| |||||||||||||||    
T  46591183 atagaaacaaaggacaattcgataatattaacacacaaaacaaacacattaattacac 46591126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 2343048 - 2342934
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    ||||||||||| |||||||||| |||| |||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||| |||||||||||||||    
T  2343048 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagtcaaatttaatacacacacaaacaaaagacaatttggtaatattaacacac 2342950  T
Q  295 aaaacagacacattaa 310  Q
    |||| |||||||||||    
T  2342949 aaaatagacacattaa 2342934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 381
Target Start/End: Original strand, 5852832 - 5852993
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    |||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||||| |||||  ||||||||||||||||    
T  5852832 actatcttatcttgaaatatgaaaagtcaaatttaatacacatgcaaacaaaggacaatttcggaatattaacacataaaac--acacattaattacacc 5852929  T
Q  318 gacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | ||||       || |||| || ||||| |||| | |  ||||||||||||||||||||||||    
T  5852930 ggcaactttctttaacaaatatgtaaaagacaattggtacctacattaagggacggagggagta 5852993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 44335438 - 44335284
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtctt-gaaatatgaaaagtcagatttaat---acacatacaaacaaagaacaatttcgtaatattaac 290  Q
    |||||||| || |||||||||| |||| |||||||| ||||| |||||||||| |||||||   |||| ||||||||||| ||||||| |||||||||||    
T  44335438 taaacatatccttaattaatactactaacttgtctttgaaatttgaaaagtcaaatttaattatacacgtacaaacaaaggacaatttggtaatattaac 44335339  T
Q  291 acacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    |||||||||||||||||||||||||| ||||||       |||||||||||||||    
T  44335338 acacaaaacagacacattaattacactgacaacttttattaagaaatgtgaaaaa 44335284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 144 - 380
Target Start/End: Original strand, 13723376 - 13723621
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnn---cctaaacatacccctaattaataccactat------cttgtcttgaaa 234  Q
    |||||||||||  |||||||||||||||||||||||||||||          ||||||||| |||||||||| ||| ||||       ||| ||||||||    
T  13723376 ctaaatataaaccccttttcaaattactagatgcatttattattatttttttcctaaacatgcccctaattattactactagtactaacttatcttgaaa 13723475  T
Q  235 tatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaaga 334  Q
    |||||||||||| ||||||||||||||||||||||| | ||||| |||||||||| |||||||| ||||||||||||| |||  |||||       ||||    
T  13723476 tatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaatacacaaaatagacacattaattgcactaacaacttttcttaaga 13723575  T
Q  335 aatgtgaaaaaggcaatggatggctacattaagggacggagggagt 380  Q
    ||||||||||| |||| || ||  ||||| ||| || |||||||||    
T  13723576 aatgtgaaaaatgcaaagggtgcttacataaagagatggagggagt 13723621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 24415116 - 24415018
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||| ||| |||||||||||||||||||    
T  24415116 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaagagatacattaattacaccgacaa 24415018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 31305431 - 31305335
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| || |||||| |||||||||||||||||| |||||    
T  31305431 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattagcatacaaaatagacacattaattacaccaacaac 31305335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 312
Target Start/End: Complemental strand, 4082121 - 4081954
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||| || |||||||||||||| |||||||| |||       |||||||||| ||||||||||||  |||| |||||||| ||||||||||| |    
T  4082121 taaatataaactcattttcaaattactaaatgcatttgttattattttcctaaacatatccctaattaataatactaacttgtctttaaatatgaaaaat 4082022  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || |||||||||||||||| |||||  | ||||| |||||||||||| |||||  | |||||||||||    
T  4082021 caaatttaatacacatacagacaaatgataatttagtaatattaacatacaaactaaacacattaatt 4081954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 15911461 - 15911631
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||||  ||||||||||||| ||||||||| |||||       | ||||||||||  |||||||||  |||| ||||||||||||||||||| ||    
T  15911461 taaatataaaccccttttcaaattattagatgcatgtattatttttttc-taaacatacctttaattaatattactaacttgtcttgaaatatgaaatgt 15911559  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    || ||||||||||||||||||||||     |||| ||||||||||||||||||| ||||||||||| |||||    
T  15911560 cacatttaatacacatacaaacaaatggttatttggtaatattaacacacaaaatagacacattaagtacac 15911631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 323
Target Start/End: Complemental strand, 32144458 - 32144328
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||| ||||||||||||  | || |||||||| ||||||||||||||| |||| |||||||||||||||||  ||||||| ||||||||||| |    
T  32144458 cctaaacatatccctaattaatattattaacttgtcttaaaatatgaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatattaacgc 32144359  T
Q  293 acaaaacagacacattaattacaccgacaac 323  Q
    |||||| ||||||||||| | |||| |||||    
T  32144358 acaaaatagacacattaaatgcaccaacaac 32144328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 31807939 - 31808051
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||||||||||| |||| |||||||||||||| |||| |||| |||| |||||||| ||||||||  | ||||| ||||||||||||||||||| ||||    
T  31807939 ccctaattaatactactaacttgtcttgaaataggaaatgtcaaatttgatacacatgcaaacaaaagataatttggtaatattaacacacaaaatagac 31808038  T
Q  304 acattaattacac 316  Q
    |||||||||||||    
T  31808039 acattaattacac 31808051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 270
Target Start/End: Complemental strand, 34012702 - 34012557
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| ||||||   ||||| |||| |  |||| ||||||||||||||||||||||       ||||||||||||| |||||||||| ||||||    
T  34012702 atttgattttatttttgtcgttaaatgtaaacttttttttaaattactagatgcatttattatttttt-cctaaacatacccttaattaatactactatc 34012604  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaag 270  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||||    
T  34012603 ttgtcttgaaatatgaaaagttaaatttaatacacatataaacaaag 34012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 35001265 - 35001414
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnna 331  Q
    ||||||| ||||| | ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||  || ||||||| ||||||       |    
T  35001265 aaatatgtaaagttaaatttaatacacatacaaacaaaggacaatttcataacattaacacacaaaacagacattttgattacactgacaacttttctta 35001364  T
Q  332 agaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | ||||||||||||| |||||| || ||| ||||||||||||| ||||||    
T  35001365 ataaatgtgaaaaagacaatgggtgcctagattaagggacggaaggagta 35001414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 265
Target Start/End: Original strand, 46732848 - 46732988
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| |||||| ||||||| ||||| | |||| ||||||||| ||||||||||||       |||||||||||||||||||| ||| ||||      
T  46732848 atttgactttatttttgtccctaaatgtaaatccttttttaaattacta-atgcatttattattttttccctaaacatacccctaattattactactaat 46732946  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaa 265  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  46732947 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaa 46732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 3072283 - 3072167
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||  ||| ||| ||||||||  |||||||||||||    
T  3072283 ctaaacatacctctaattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacat--aaaaaaaaaacaatttaataatattaacaca 3072186  T
Q  294 caaaacagacacattaatt 312  Q
     |||| | |||||||||||    
T  3072185 taaaataaacacattaatt 3072167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 28679778 - 28679896
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| ||||||||||||||||| |  | ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||  ||||||||||||    
T  28679778 cctaaaaatacccctaattaatactaaaaacttatcttgaaatattaaaaatcaaatttaatacacatacaaacaaa-aacaatttaataatattaacac 28679876  T
Q  293 acaaaacagacacattaatt 312  Q
    |||||| |||||||||||||    
T  28679877 acaaaatagacacattaatt 28679896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 35365904 - 35366063
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnnc--ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||||||||||||||||||          |||||||||||  ||||||||||   || |||||||| ||||||||||||||| |||||||||    
T  35365904 ttttcaaattactagatgcatttattattattattttctaaacatacctttaattaatactgttaacttgtcttaaaatatgaaaagtcaaatttaatac 35366003  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||  |||||||  |||||||||||||||||| ||| |||||| ||||||    
T  35366004 acatacaaacaaaagacaatttgataatattaacacacaaaatagatacattacttacac 35366063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 47754634 - 47754717
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||| |||||||||||||    
T  47754634 ttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacaaaaaatagacacattaatt 47754717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 122 - 381
Target Start/End: Original strand, 9684601 - 9684862
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaata---cca 218  Q
    ||||||||||||| |||||||  ||||| ||||  |||||| |||||| |||||||||||||||          ||| ||||||||||||||||   |||    
T  9684601 ccatttgattttatttttgttattaaatgtaaacccctttttaaattattagatgcatttattatttttttta-aaatatacccctaattaataatacca 9684699  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacataca--aacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| |||||||||||||||||  || | |||||||| | ||| |  || |||| ||||||| ||||||||||| ||||||||||||||||||||||||     
T  9684700 ctatattgtcttgaaatatgaa--gttaaatttaatatatatatataaataaaggacaattttgtaatattaacgcacaaaacagacacattaattacat 9684797  T
Q  317 cgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||| |||       || ||||||||||||   ||||| || ||| ||||||||||||||||||||    
T  9684798 cgataactttttttaaaaaatgtgaaaaatataatggctgtctatattaagggacggagggagta 9684862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 206 - 353
Target Start/End: Complemental strand, 44395669 - 44395522
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| | || | |||||||||||||||||| ||| |||||||| |||||||||||||| | ||||| |||||||||||||| |||| | |||     
T  44395669 ctaattaatactattaacatgtcttgaaatatgaaaaatcaaatttaatatacatacaaacaaaggataattttgtaatattaacacataaaataaacat 44395570  T
Q  306 attaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatgg 353  Q
    ||||||||||| ||||||       |||||||||||||| | ||||||    
T  44395569 attaattacactgacaacatttcttaagaaatgtgaaaaggacaatgg 44395522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 38680592 - 38680499
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||||  |||||||  |||||||||||||||||| |||||||||||||||||    
T  38680592 cttgttttgaaatatgcaaagacaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacac 38680499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 10842474 - 10842374
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||||  || ||  |||||||||||||||||||| |||||| |||||||||||||||  | ||||| |||||||||||||    
T  10842474 cctaaacatacccctaattaataccgttaactcatcttgaaatatgaaaagtcaaatttaacacacatacaaacaaacgataatttggtaatattaacac 10842375  T
Q  293 a 293  Q
    |    
T  10842374 a 10842374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 350
Target Start/End: Complemental strand, 27531244 - 27531089
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    ||||||||| | |||||||||  |||| ||| |||||||||||| |  || | ||||  || |||||||||||||||||||||  |||||||||||||||    
T  27531244 taaacatactcataattaatattactaacttatcttgaaatatgtagggttaaattttttatacatacaaacaaagaacaattaagtaatattaacacac 27531145  T
Q  295 aaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||| |||||||||||| || ||||||       ||||||||||||||| ||||    
T  27531144 aaaacaaacacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaa 27531089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 291591 - 291704
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||| |||||||||||| |||| ||| |||| |||||| |||||| | |||||||||| |||||||||||  ||||||| ||||||||||||     
T  291591 cctaaatatactcctaattaatactactaacttatcttaaaatataaaaagttaaatttaatacaaatacaaacaaatgacaatttagtaatattaacat 291690  T
Q  293 acaaaacagacaca 306  Q
    |||||| |||||||    
T  291691 acaaaatagacaca 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 230 - 319
Target Start/End: Original strand, 16395541 - 16395630
Alignment:
Q  230 tgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||||||||||||||||| |||| | |||||||||||||||  | ||||| |||||||||||| |||||| ||||||||||||||||||||    
T  16395541 tgaaatatgaaaagtcaaattttacacacatacaaacaaaagataatttggtaatattaacatacaaaatagacacattaattacaccga 16395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 316
Target Start/End: Complemental strand, 44163442 - 44163256
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||| | ||||||| ||||  ||||| |||||||||||||||||||||||       || ||| | || | |||||||||| ||    
T  44163442 acccatttgactttatttttatccctaaatgtaaaccccttt-caaattactagatgcatttattattttttgcc-aaatacactcttaattaatactac 44163345  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    || |||||||||||||||||    |||    |||||||||||||||||||  |||||||  |||||||||||||||||||| |||||||||||||||    
T  44163344 taacttgtcttgaaatatga----tca----taatacacatacaaacaaatgacaatttaataatattaacacacaaaacaaacacattaattacac 44163256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 49033919 - 49033829
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||| ||||| ||||||||||||  ||| |||||||||||||||||| |||||| |||||  |||||| |||||||||||||||||||||    
T  49033919 tactccctccgtccctgtatgtaaccaccaatttgattttacttttgtccctaaacataaacccctttttaaattactagatgcatttatt 49033829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 40261794 - 40261623
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatctt-gtcttgaaata 236  Q
    |||||||||||| | ||| |||||||||||||||| || ||||||| |       ||| |||||  || ||||||||| ||||| ||| |||||||||||    
T  40261794 ttgttcctaaatgtgaatcccttttcaaattactatattcatttatcattattttccttaacat--ccataattaatatcactaactttgtcttgaaata 40261697  T
Q  237 tgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    | |||||||| |||||||||| |||  |||||||  ||||||  |||||||||||||||||| | |||||||||||    
T  40261696 taaaaagtcaaatttaatacatata--aacaaagggcaatttgataatattaacacacaaaataaacacattaatt 40261623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 230 - 350
Target Start/End: Complemental strand, 50692520 - 50692399
Alignment:
Q  230 tgaaatatgaaaagtcagattta-atacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnn 328  Q
    ||||||||||| ||||| ||||| | |||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||||| ||  ||||||         
T  50692520 tgaaatatgaacagtcaaatttataaacacatacaaacaaaggacaatttggtaatactaacacacaaaatagacacattaattgcattgacaacttttc 50692421  T
Q  329 nnaagaaatgtgaaaaaggcaa 350  Q
      |||||||||||||| |||||    
T  50692420 ttaagaaatgtgaaaagggcaa 50692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 29302367 - 29302480
Alignment:
Q  115 taaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaat 214  Q
    |||| |||||||| |||| | |||||| | |||||||||||  ||||||||||||||||||||||||||||       ||||||||||||| || |||||    
T  29302367 taaacacccatttaatttaatttttgtccttaaatataaatctcttttcaaattactagatgcatttattatttttttcctaaacatacccatatttaat 29302466  T
Q  215 accactatcttgtc 228  Q
    |  |||||||||||    
T  29302467 attactatcttgtc 29302480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 32715634 - 32715567
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| | |||||||||||||||||||    
T  32715634 ttgtcttgaaatataaaaagtcaaatttaatacacatac-aacaaagtataatttcgtaatattaacac 32715567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 3143717 - 3143813
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| |||||||||||||||||||| | | |||||||| |||||||||||||  |||||||  ||||| ||  |||||||| |||||||||||||||||    
T  3143717 actaacttgtcttgaaatatgaaaaataatatttaataaacatacaaacaaaagacaatttgataataata--acacaaaatagacacattaattacac 3143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 13352976 - 13352862
Alignment:
Q  197 aacatacccctaattaataccactatctt-gtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    ||||||| | |||||||||| |||| ||| |||| ||||||||||||| || || |||||||  |||||| |||  |||||||  ||||||||||||| |    
T  13352976 aacatactcttaattaatactactaactttgtctcgaaatatgaaaaggcaaatataataca--tacaaataaatgacaatttgctaatattaacacata 13352879  T
Q  296 aaacagacacattaatt 312  Q
    |||||||||||||||||    
T  13352878 aaacagacacattaatt 13352862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 15457783 - 15457876
Alignment:
Q  205 cctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||||||  ||||  ||||  ||||||||||||| ||| ||||||||||||||||||||||  |||||||  |||||||| |||||||||    
T  15457783 cctaattaatattactaatttgttctgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatattatcacacaaaa 15457876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 32716039 - 32715918
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| ||| |||  ||||||||||||||| ||||||  |||||| ||||  ||||||||||||||||||||| |||||||           
T  32716039 atactccctccgtccctatatctaagcacccatttgattttatttttgtctctaaatgtaaac-ccttttcaaattactagatgcgtttattattttttt 32715941  T
Q  193 cctaaacatacccctaattaata 215  Q
    | |||||||||||||||||||||    
T  32715940 cataaacatacccctaattaata 32715918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 13699013 - 13698916
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaata 255  Q
    |||||||||||||||| |||||||||||       ||||||||||||  |||||||||| |||| ||| |||| ||||||||||| ||| ||||||||    
T  13699013 cttttcaaattactagttgcatttattattttttccctaaacatacctataattaatactactaacttatcttaaaatatgaaaaatcaaatttaata 13698916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 41737217 - 41737149
Alignment:
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||| |||||||||||||||  ||||||| ||||||||||||||||||| |||||  ||||||||||    
T  41737217 atttaaaacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacattttaattacac 41737149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 309
Target Start/End: Complemental strand, 34331997 - 34331906
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    |||| ||| |||||||||||||||||||| |||||||||||||| |||||||  | ||||  ||| || | |||||||||| ||||||||||    
T  34331997 actaacttctcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataattcagtactactcacacacaaaatagacacatta 34331906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 40612926 - 40613009
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatt 287  Q
    ||||||||||||| |||| ||| |  ||||||||||||||||| ||| |||||||||  |||||||||| ||||| ||||||||    
T  40612926 ccctaattaatactactaacttataatgaaatatgaaaagtcaaattaaatacacatttaaacaaagaataatttagtaatatt 40613009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 29302494 - 29302593
Alignment:
Q  282 aatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||| |||||||| | ||||| ||||||| ||||||       ||||||||||||||||| |||||||| |||||||||| | |||||| ||||    
T  29302494 aatattaacatacaaaacaaatacattgattacactgacaacttttcttaagaaatgtgaaaaagggaatggatgcctacattaagcgtcggaggaagta 29302593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 47753906 - 47754021
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| ||| |||| || ||||||| |||| |||||| ||||||  ||||  | ||||||| |||||||||||||||||||       |||||||||||||    
T  47753906 ccctatatctaaacactcatttgactttatttttgtccctaaacgtaaacccattttcaacttactagatgcatttattatatttttcctaaacataccc 47754005  T
Q  206 ctaattaataccacta 221  Q
    ||||||||||| ||||    
T  47754006 ctaattaatactacta 47754021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 23393501 - 23393590
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||||  |||||||  ||| ||||| |||||||| ||| ||||||||||||    
T  23393501 cttgtcttgaaatatgaatagtcaaa--taatacacatacaaacaaatgacaatttaataa-attaatacacaaaatagatacattaattaca 23393590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 323
Target Start/End: Complemental strand, 34012134 - 34012074
Alignment:
Q  263 aaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||||||  |||||||| ||||||||||||| |||||||||||||||||| ||| ||||||    
T  34012134 aaacaaaagacaatttcataatattaacacataaaacagacacattaattgcactgacaac 34012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 34102596 - 34102472
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||||||| |||  ||| ||||||||||| |||||| |||||||||||   | ||||||||||| |||||||||||||||       ||||||||| |||    
T  34102596 ccctgtatttaagcaccaatttgattttatttttgtccctaaatataaccac-ttttcaaattattagatgcatttatta-ttttttcctaaacatgccc 34102499  T
Q  206 ctaattaataccactatcttgtcttga 232  Q
     |||||||||| |||| ||||||||||    
T  34102498 ttaattaatactactaacttgtcttga 34102472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 6282563 - 6282502
Alignment:
Q  251 taatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||| ||| |||||||| |||||||  ||||||||||||| |||| |||||||||||||    
T  6282563 taatacatatataaacaaaggacaattttataatattaacacataaaatagacacattaatt 6282502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 7957573 - 7957634
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||||| |||| |||||||| ||||| ||||  ||| ||||||||||||||||||||||||    
T  7957573 catttgactttatttttgttcttaaatgtaaacccctcttcaaattactagatgcatttatt 7957634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 40702534 - 40702442
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| ||| ||||| |||| ||| ||| |||||||||| ||||||| ||||||||  ||||||| || || |||| ||||||||||| |||||    
T  40702534 ttgtattggaatataaaaattcaaattcaatacacatataaacaaaaaacaatttaataatattcacgcataaaatagacacattaactacac 40702442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 382
Target Start/End: Original strand, 12845080 - 12845131
Alignment:
Q  331 aagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    ||||||||||||||| |||||||  || || |||||||||||||||||||||    
T  12845080 aagaaatgtgaaaaatgcaatggggggttatattaagggacggagggagtac 12845131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 24415207 - 24415144
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||||||| |||| |||| | | ||||||||||| || ||| ||||||||||||||||||||||    
T  24415207 ccatttgactttatttttatccttaaatataaatccccttttaaattactagatgcatttatta 24415144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 310
Target Start/End: Original strand, 43414784 - 43414862
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    ||||||||||| | | ||||| ||||||||||||||||  ||| | | |||||||||||| |||||| | |||||||||    
T  43414784 aaatatgaaaaattaaatttactacacatacaaacaaaatacattatagtaatattaacatacaaaatatacacattaa 43414862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 47133463 - 47133517
Alignment:
Q  261 acaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||  |||||||  |||||||||||||||||| | ||||||||||||||    
T  47133463 acaaacaaatgacaatttaataatattaacacacaaaataaacacattaattaca 47133517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 5852591 - 5852652
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||| |||||| |||| ||| ||||| ||||   ||||||||||||||||||||||||||||    
T  5852591 atttaattttatttttattcttaaatgtaaaactcttttcaaattactagatgcatttatta 5852652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 6023915 - 6023964
Alignment:
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaa 297  Q
    |||||||| ||||||||||||| | ||||||  |||||||||||||||||    
T  6023915 atttaatatacatacaaacaaaaagcaatttaataatattaacacacaaa 6023964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 23393141 - 23393202
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||| |||||| |||||||| | ||| |||||| ||||| |||||| |||||||||||||||    
T  23393141 atttaattttatttttgttcttgaatgtaaatttctttttaaattattagatgcatttatta 23393202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 34028469 - 34028522
Alignment:
Q  205 cctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    |||||||||||| |||| |||| |||| |||||||||||||| ||| |||||||    
T  34028469 cctaattaatactactaacttgccttggaatatgaaaagtcaaattaaatacac 34028522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 47133385 - 47133426
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||||||||||  ||||| ||||||||||||||||||||||    
T  47133385 ctaaatataaatatctttttaaattactagatgcatttatta 47133426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 12706004 - 12706036
Alignment:
Q  283 atattaacacacaaaacagacacattaattaca 315  Q
    ||||||| |||||||||||||||||||||||||    
T  12706004 atattaatacacaaaacagacacattaattaca 12706036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 48573109 - 48573173
Alignment:
Q  205 cctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||| ||| |||| |||  ||| ||||||||||| | | ||||||||||||||||||||||    
T  48573109 cctaattagtactactaacttaccttaaaatatgaaaaattaaatttaatacacatacaaacaaa 48573173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 6e-84; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 106 - 369
Target Start/End: Original strand, 41727110 - 41727373
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| |||||||| || ||||||||||||||||||||| ||||| ||||  |||||| ||||||||| ||||||||||||       | |||||||||||    
T  41727110 ccctatatgtaaacactcatttgattttacttttgttcttaaatgtaaacccctttttaaattactaaatgcatttattatttttttcttaaacataccc 41727209  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  41727210 ctaattaatatcactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaattttgtaatattaacacacaaaacagacac 41727309  T
Q  306 attaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaaggg 369  Q
    ||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||    
T  41727310 attaattacactgacaactttttttaagaaatgtgaaaaaggcaatggatggctacattaaggg 41727373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 162 - 381
Target Start/End: Complemental strand, 30476219 - 30476000
Alignment:
Q  162 tcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacata 261  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||    
T  30476219 tcaaattactagatgcatttattatttttttcctaaacatacccctaattaatactactatcttctcttgaaatatgaaaagtcaaatttaatagacata 30476120  T
Q  262 caaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctac 361  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||       || |||||||||||||||||||| || ||||    
T  30476119 caaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaatgggtgcctac 30476020  T
Q  362 attaagggacggagggagta 381  Q
    ||||||||||||||||||||    
T  30476019 attaagggacggagggagta 30476000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 120 - 350
Target Start/End: Original strand, 26517101 - 26517331
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||| || ||| |||||||||||||||||||||||       |||||||||||||||||||||||| ||    
T  26517101 acccatttgattttatttttgtccctaaatgtaaactcttttacaaattactagatgcatttattattttttgcctaaacatacccctaattaatactac 26517200  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||||| ||    
T  26517201 taacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggacaatttggtaatattaacacagaaaacagacacattaattacactga 26517300  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    ||||       ||||||||||||||| ||||    
T  26517301 caacttttcttaagaaatgtgaaaaatgcaa 26517331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 381
Target Start/End: Original strand, 29676597 - 29676886
Alignment:
Q  90 taaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnn 189  Q
    ||||||||| ||||| |||| ||| |||  || |||||||||||| |||||| ||||||| ||||   | ||||||||||||| ||||||||||||        
T  29676597 taaatactccctccgtccctatatctaagcactcatttgattttatttttgtccctaaatgtaaacctcatttcaaattacta-atgcatttattatttt 29676695  T
Q  190 nnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaa 289  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| |||  ||||||||||||||||||    
T  29676696 tc-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaatgccaaatttaatacacatacaaataaaagacaatttcgtaatattaa 29676794  T
Q  290 cacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||| |||| ||||||||||||||||| |||||        ||||||| ||||||||||||||| || ||||||||||||||||||||||||    
T  29676795 cacataaaatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggcaatgggtgcctacattaagggacggagggagta 29676886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 124 - 345
Target Start/End: Complemental strand, 31819622 - 31819401
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| |||||||||||     |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||     
T  31819622 atttgattttatttttgtccctaaatataacccaattttcaaattactagatgcatttattatttttttcctaaacatacccctaattaatactactata 31819523  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  31819522 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacaccgataac 31819423  T
Q  324 nnnnnnnaagaaatgtgaaaaa 345  Q
           |||||||||||||||    
T  31819422 ttttcttaagaaatgtgaaaaa 31819401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 100 - 386
Target Start/End: Original strand, 43186967 - 43187245
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaac 199  Q
    ||||| |||| |||||||| | |||||||||||||||||||| | ||||||||||  ||||||||| |||||||||||||||||||       |||||||    
T  43186967 ctccgtccctatatgtaaacatccatttgattttacttttgtccttaaatataaaccccttttcaatttactagatgcatttattatttttttcctaaac 43187066  T
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||||||  |||||||| ||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||| |||||||||    
T  43187067 ataccctgaattaatatcactatcttgtcttgaaatatgaaaagtca--------acacatacaaacaaaggacaatttcgtaatattaatacacaaaac 43187158  T
Q  300 agacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacatct 386  Q
    ||||||||||||||||  ||||||       ||||||| ||||||||||||||  || ||||||||| |||||||||||||| ||||    
T  43187159 agacacattaattacattgacaactttttttaagaaatatgaaaaaggcaatgagtgactacattaacggacggagggagtatatct 43187245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 46048740 - 46048480
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccc-taattaataccacta 221  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||| |||||||||||||||        ||||||||||||| ||||||| || ||||    
T  46048740 catttgattttatttttgtccctaaatgtaaaccccttttcaaattaatagatgcatttattattttttttctaaacataccccctaattaacactacta 46048641  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  46048640 tcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacagacacattaattacactgaca 46048541  T
Q  322 acnnnnnnnaagaaatgtg-aaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||       |||||||||| |||||||| |||  || |||||||||||  |||||||||||    
T  46048540 acttttcttaagaaatgtgaaaaaaggcgatgagtgcctacattaaggagcggagggagta 46048480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 123 - 374
Target Start/End: Original strand, 12077630 - 12077883
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccact 220  Q
    |||||||||||| |||||| | ||||| ||||  |||||||||||||||||||||||||||||         ||||||||||||||||||||||||  ||    
T  12077630 catttgattttatttttgtccttaaatgtaaaccccttttcaaattactagatgcatttattaattttttttcctaaacatacccctaattaatacttct 12077729  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||| |||    
T  12077730 atcttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacactgac 12077829  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacgga 374  Q
    |||       ||||||| ||||||| ||||||| || |||||||||||||||||    
T  12077830 aacttttcttaagaaatttgaaaaatgcaatgggtgcctacattaagggacgga 12077883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 121 - 381
Target Start/End: Original strand, 41308664 - 41308923
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||||| |||| ||||||  |||||| ||||| || ||||||||||||||||||||||||||       |||||||||||||||||||||||| |||    
T  41308664 cccatttgactttatttttgtctctaaat-taaatcccctttcaaattactagatgcatttattatttttttcctaaacatacccctaattaatactact 41308762  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | ||||||||||||||||||||| || |||||||||||||| |||||||||| || || ||||||||||||||||||||||||||||||||||||| |||    
T  41308763 aacttgtcttgaaatatgaaaagccaaatttaatacacatataaacaaagaataaattggtaatattaacacacaaaacagacacattaattacactgac 41308862  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       ||||||||||||||||||  |  ||| ||||||||| | ||||| ||||||    
T  41308863 aacattttttaagaaatgtgaaaaaggccgtaaatgcctacattaaagaacggatggagta 41308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 125 - 370
Target Start/End: Complemental strand, 40645887 - 40645644
Alignment:
Q  125 tttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatct 224  Q
    ||||| |||| |||| | ||||||||||||   | |||||||||| |||||||||||||||       |||||||||||||||||||||||| | || ||    
T  40645887 tttgactttatttttatccctaaatataaacctcctttcaaattattagatgcatttattattttt--cctaaacatacccctaattaatactaataact 40645790  T
Q  225 tgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacn 324  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||| ||||||     
T  40645789 tgtcttgaaatatgaaaaaccaagtttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattacacagacaaca 40645690  T
Q  325 nnnnnnaagaaatgtgaaaaaggcaatggatggctacattaaggga 370  Q
          |||||||||||||||||||||||||| |||||||||||||    
T  40645689 tttcttaagaaatgtgaaaaaggcaatggatgcctacattaaggga 40645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 94 - 313
Target Start/End: Complemental strand, 42891664 - 42891446
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| || ||||| |||||||||| |||| |||||| ||||||| ||||  ||| |||||||||||||||||||||||||       |    
T  42891664 tactccctccgtccctatacgtaaacacccatttgactttatttttgtccctaaatgtaaacccctcttcaaattactagatgcatttattatttttt-c 42891566  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||| |||||||||||||| ||| ||| ||||||||||||||    
T  42891565 ctaaacatacccctaattaataccactaacttgtctttaaatttgaaaagtcaaatttaatatacatacaaacaaaggacagtttggtaatattaacaca 42891466  T
Q  294 caaaacagacacattaatta 313  Q
    ||||||||||| ||||||||    
T  42891465 caaaacagacaaattaatta 42891446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 193 - 381
Target Start/End: Original strand, 27638036 - 27638224
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  27638036 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaatgtcaaatttaatacacatacaaacaaaggacaattttataatattaacac 27638135  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||| ||| |||||||||||||  | |||       ||||||||||||||||| |||||||| ||| ||||| ||||||||| ||||    
T  27638136 acaaaatagagacattaattacactaataacttttcttaagaaatgtgaaaaaggtaatggatgcctatattaaaggacggaggcagta 27638224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 316
Target Start/End: Original strand, 20945157 - 20945382
Alignment:
Q  91 aaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnn 190  Q
    |||||||| || || |||| ||| |||  |||||||||| |||| |||||| ||||||| ||||  ||||||||||||||||||||||||| |||         
T  20945157 aaatactcccttcgtccctatatctaagcacccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttgttattatt 20945256  T
Q  191 nncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaac 290  Q
      |||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||  |||||||||||    
T  20945257 ttcctaaacataaccctaattaatactactaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattaggtaatattaac 20945356  T
Q  291 acacaaaacagacacattaattacac 316  Q
    ||| |||| |||||||||||||||||    
T  20945357 acataaaatagacacattaattacac 20945382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 316
Target Start/End: Original strand, 14645775 - 14645971
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||||| ||||| ||||  |||||| ||||||||| ||||||||||||        ||||||||||||||| ||||||| ||    
T  14645775 acccatttgactttatttttgttcttaaatgtaaacccctttttaaattactatatgcatttattattttttttctaaacatacccctagttaatactac 14645874  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    || ||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  14645875 taacttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaataacaatttggtaatattaacacacaaaatagacacattaattacac 14645971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 120 - 322
Target Start/End: Complemental strand, 26043236 - 26043037
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| ||||||| |||| ||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||| ||    
T  26043236 acccatttgacttta-ttttgtccctaaatgtaaactccttttcaaattactagacgcatttattatttttttcctaaacataccc-taattaatactac 26043139  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||  || |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||| ||    
T  26043138 taa-ttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaacattaacacacaaaacagacatattaattacactga 26043040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 44083845 - 44083652
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||||| |||| |||||| ||||||| ||||  | ||||||||||||||||| |||||||||       ||||||||||||||||||||||| |||||    
T  44083845 ccatttgactttatttttgtccctaaatgtaaacccattttcaaattactagatccatttattattttttccctaaacatacccctaattaatatcacta 44083746  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
     ||| |||||||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||| ||| ||||||||||||    
T  44083745 acttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacacacaaaatagatacattaattaca 44083652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 120 - 381
Target Start/End: Original strand, 50524862 - 50525123
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| | ||||| ||||  | |||||||||||| ||||||||||||||       ||||||||||||||||||||| || ||    
T  50524862 acccatttgactttatttttgtccttaaatctaaaccctttttcaaattacaagatgcatttattatttttttcctaaacatacccctaattaaaactac 50524961  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || ||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||| ||||||||| ||||    
T  50524962 taacttgtcttgaaatttcaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatatacatattaattaccccga 50525061  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
     | |       ||||||||||||||| | || || ||  ||||||||||||| |||||||||    
T  50525062 gagcttttcttaagaaatgtgaaaaaagaaaagggtgcttacattaagggacagagggagta 50525123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 122 - 322
Target Start/End: Complemental strand, 50363242 - 50363045
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||| | ||||  | |||||||||||||| || |||||||||       |||||||||||||||||||||||| ||||    
T  50363242 ccatttgattttagttttgtccctaa-tgtaaaacctttttcaaattactaaatacatttattattttt--cctaaacatacccctaattaatactacta 50363146  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||| ||| |||||||||| ||||||||||| ||||    
T  50363145 acttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatacataaaacagacatattaattacactgaca 50363046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 120 - 381
Target Start/End: Complemental strand, 50092889 - 50092627
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaa-catacccctaattaatacca 218  Q
    |||||||| |||||| |||||| | |||||||||||   ||||||||||| |||||||||||||||         |||| ||||||| |||||||||  |    
T  50092889 acccatttaattttatttttgtccataaatataaatctattttcaaattaatagatgcatttattattatttttttaaaacatacccttaattaatatta 50092790  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
      ||||||||||||||||||||||| ||  ||||||||||||||||| |||| ||||||| |||||||||| |||||||||  ||||||||||||||| |    
T  50092789 tcatcttgtcttgaaatatgaaaagacaattttaatacacatacaaataaaggacaattttgtaatattaatacacaaaaccaacacattaattacactg 50092690  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
     ||||       ||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  50092689 tcaacttttgttaagaaatgtaaaaaaggcaatagatgcttacattaagggacggagggagta 50092627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 122 - 323
Target Start/End: Complemental strand, 28477602 - 28477402
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||||| |||| |||||  ||||||| ||||   ||||||||||||||||||||||||||||       |  ||| ||||||||||||||||| ||||    
T  28477602 ccatttgactttatttttgcccctaaatgtaaacctcttttcaaattactagatgcatttattatttttt-ctaaaatatacccctaattaatactacta 28477504  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
      ||||||||||||||||| ||||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  28477503 atttgtcttgaaatatgaatagtcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaacagacacattaattgcaccgaca 28477404  T
Q  322 ac 323  Q
    ||    
T  28477403 ac 28477402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 100 - 323
Target Start/End: Original strand, 13084226 - 13084447
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaac 199  Q
    ||||| |||| ||| |||| | ||| ||||||||| |||| | | ||||  |||| ||||||||||||||||||||||||||||||       |||||||    
T  13084226 ctccgtccctatatctaaacatccaattgattttatttttatccttaaacgtaaactccttttcaaattactagatgcatttattattttt--cctaaac 13084323  T
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||| ||||||||||| | |||| ||||| || |||| |||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  13084324 atatccctaattaatgctactaacttgtgttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaac 13084423  T
Q  300 agacacattaattacaccgacaac 323  Q
    |||||||||||||| || ||||||    
T  13084424 agacacattaattatactgacaac 13084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 39617213 - 39617339
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||| ||| ||||||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||    
T  39617213 taaatatatccctaattaatactact--cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatac 39617310  T
Q  295 aaaacagacacattaattacaccgacaac 323  Q
    |||||||||||||||||||||| ||||||    
T  39617311 aaaacagacacattaattacactgacaac 39617339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 138 - 311
Target Start/End: Complemental strand, 21933128 - 21932955
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| ||| ||||||||  | |||||||||||||||||||||||||||       ||||||||||||||||||||||||   || ||| |||||||||||    
T  21933128 ttgtccctgaatataaacccattttcaaattactagatgcatttattatttttttcctaaacatacccctaattaatacggttaacttatcttgaaatat 21933029  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    ||||||||| |||||| |||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||    
T  21933028 gaaaagtcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaat 21932955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 120 - 316
Target Start/End: Complemental strand, 51263303 - 51263106
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaatacca 218  Q
    |||| ||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||| |||         | ||||||||   |||||||||| |    
T  51263303 acccgtttgattttatatttgttcctaaatataaattcattttcaaattactagatgtatttgttaattttttttttaaacatacttttaattaatacta 51263204  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||| ||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||||||    
T  51263203 ctaacttatctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatactaacacataaaacagacacattaattacac 51263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 11388304 - 11388145
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaata--ccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||  | |||| ||| |||||||||||||||||||| |||||||||    
T  11388304 ttttcaaattactagatgcatttattattttttttctaaacatacccctaattaatatactactaacttatcttgaaatatgaaaagtcaaatttaatac 11388205  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||  ||||||| ||||||||||||| ||||| |||||||||||||||||    
T  11388204 acatacaaacaaaatacaatttggtaatattaacacgcaaaatagacacattaattacac 11388145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 310
Target Start/End: Complemental strand, 35055987 - 35055816
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||||| |||||||||||  |||||||||||| |||||||||||||||       ||||||||||||| |||||||||| |||| ||||| |||||||||    
T  35055987 ttgttcttaaatataaatctcttttcaaattattagatgcatttattattttat-cctaaacatacccataattaatactactaacttgtattgaaatat 35055889  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
     |||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||    
T  35055888 aaaaagtcaaatttaatacacatacaagcaaatgacaatttggtaatattaacacacaaaatagacacattaa 35055816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 122 - 291
Target Start/End: Complemental strand, 35145449 - 35145280
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||        |||||||||| ||||||||||||  ||     
T  35145449 ccatttgattttatttttgtccctaaatataaactc-ttttcaaattactagatgcatttattattttttttcctaaacatatccctaattaatattacc 35145351  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    || ||||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||    
T  35145350 attttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaggataatttcgtaatattaaca 35145280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 41739877 - 41740051
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| |||||||||||| || ||||||||||||||| | |||||||||       ||||||||||||| ||||||||||  ||| ||| |||||||||||    
T  41739877 ttgtccctaaatataaactcattttcaaattactaggtacatttattatttttttcctaaacatacccttaattaatactgctaacttatcttgaaatat 41739976  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||| ||| |||||| |||||||||||||||| | ||||| ||||||||||||||||||| |||||||||||||    
T  41739977 gaaaattcaaatttaacacacatacaaacaaaggataatttggtaatattaacacacaaaatagacacattaatt 41740051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 93 - 313
Target Start/End: Complemental strand, 29349625 - 29349401
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| |||||  ||| ||| |||| || ||||||| |||| |||||||||||||| |||| || |||||||||||||||||||||| ||||           
T  29349625 atactccctccgttcctatatctaaacactcatttgactttatttttgttcctaaatgtaaactcattttcaaattactagatgcattaattattttttt 29349526  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacaca-tacaaacaaagaacaatt---tcgtaatatta 288  Q
    | |||||||||| ||||||||||| |||| ||| |||||||||||||||||||| |||| ||||| | ||||| |||| |||||||   | |||||||||    
T  29349525 cttaaacatacctctaattaatactactaacttatcttgaaatatgaaaagtcaaattttatacatagtacaatcaaataacaatttggtagtaatatta 29349426  T
Q  289 acacacaaaacagacacattaatta 313  Q
    || |||||||||||||| |||||||    
T  29349425 acgcacaaaacagacacgttaatta 29349401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 33288047 - 33287890
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    |||||||||||||||||| |||||| ||       |||||||||||  ||||||||||| |||| ||||||||||||||| |||||||| ||||||||||    
T  33288047 cttttcaaattactagatacatttactatttttt-cctaaacatacatctaattaatactactaacttgtcttgaaatataaaaagtcaaatttaataca 33287949  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    || |||||||||| |||||||  |||||||||||||||||| ||||| |||||||||||    
T  33287948 caaacaaacaaaggacaatttaataatattaacacacaaaatagacaaattaattacac 33287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 93 - 313
Target Start/End: Complemental strand, 22659827 - 22659607
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| || | ||| ||||||| ||||||| |||| ||||||  | |||| |||||  ||||| ||||||||||||||||||||||           
T  22659827 atactctctccgtccttatatctaaatactcatttgactttatttttgtctccaaatgtaaatctctttttaaattactagatgcatttattattatttt 22659728  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    | |||||||| || |||||||||| ||||  |||| |||||||||||||||| | ||||||||||||||||||||||  | ||||| |||||||||||||    
T  22659727 cataaacatatccttaattaatactactaatttgttttgaaatatgaaaagttaaatttaatacacatacaaacaaaagataatttggtaatattaacac 22659628  T
Q  293 acaaaacagacacattaatta 313  Q
    |||||| | | ||||||||||    
T  22659627 acaaaataaatacattaatta 22659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 193 - 345
Target Start/End: Original strand, 41543566 - 41543718
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||  |||||||  |||||||| |||    
T  41543566 cctaaatatacgcctaattaatacaactatcttgtcttgaaatatgaaatgtcaaatttaatacacatacaaataaaagacaattttataatattatcac 41543665  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    |||||| ||||||||||| ||||| ||||||       |||||||||||||||    
T  41543666 acaaaatagacacattaaatacacagacaactttttttaagaaatgtgaaaaa 41543718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 159 - 350
Target Start/End: Original strand, 46435656 - 46435846
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtctt-gaaatatgaaaagtcagatttaataca 257  Q
    |||||||||||| |||||||||||||         ||||| || ||| |||||||||| |||| |||||||| ||||| |||||||||| ||||||||||    
T  46435656 ttttcaaattacaagatgcatttattttttttcttctaaatatgcccttaattaatactactaacttgtctttgaaatttgaaaagtcaaatttaataca 46435755  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||| ||||    
T  46435756 --tacaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 46435846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 315
Target Start/End: Original strand, 831262 - 831441
Alignment:
Q  136 ttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaat 235  Q
    |||||| | ||||| |||| ||||||| ||| ||||||||||||||||||       ||||||||||| |||||||||||| | || ||| | |||||||    
T  831262 ttttgtccttaaatgtaaactcctttttaaactactagatgcatttattattattttcctaaacatactcctaattaatactaataacttatattgaaat 831361  T
Q  236 atgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||| ||||||||||||| ||| |||  |||||||||||||    
T  831362 atgaaaaatcaaatttaatacacatataaacaaaggacaatttggtaatattaacacgcaatacatgcacattaattaca 831441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 293
Target Start/End: Complemental strand, 44338326 - 44338128
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||  |||||||| |||||||||| |  |  ||||| ||||||| ||||  |||||||||||| |||||||||||||| |       |    
T  44338326 tactccctccgtcccaatatgtaaacacccatttgactaaaaatttgtacctaaatgtaaaccccttttcaaattcctagatgcatttat-attattttc 44338228  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||  |||| ||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  44338227 ctaaacatacccctaattaatagtactaacttatcttgaaatataaaaagtcaaatttaatacacatagaaacaaaggacaatttggtaatattaacaca 44338128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 48309591 - 48309477
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||||| |||||||||||||||| | ||||| ||||||||||||     
T  48309591 cctaaacatacccctaattaatactactaacttatcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaggataattttgtaatattaacat 48309492  T
Q  293 acaaaacagacacat 307  Q
    |||||| ||||||||    
T  48309491 acaaaatagacacat 48309477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 33411864 - 33412051
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||| ||| ||||| ||||||| ||||||||||| ||||| |||||||||       |||||| ||| || |||||||||| ||||    
T  33411864 ccatttgattttatttttattcttaaatgtaaattcattttcaaattattagatacatttattatttttc-cctaaatatatccttaattaatactacta 33411962  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     ||||  ||||||||||||||| || ||||||||||  |||||| ||| |||||||| ||||||||||||||||||| |||||||||||||    
T  33411963 acttgcattgaaatatgaaaagacaaatttaataca--tacaaagaaaaaacaatttggtaatattaacacacaaaatagacacattaatt 33412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 5504500 - 5504608
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    |||| ||||||||| ||||||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  5504500 tttttaaattactatatgcatttattatttttttcctaaacatacccctaattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacac 5504599  T
Q  259 atacaaaca 267  Q
    |||||||||    
T  5504600 atacaaaca 5504608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 42011015 - 42010893
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||||| ||||||||||  |||  || |||||||||||||||||||| |||||| | |||||||||||||||| |||||  ||||||||||||    
T  42011015 cctaaacatacccataattaatactgctaatttatcttgaaatatgaaaagtcaaatttaacatacatacaaacaaagaataatttgataatattaacac 42010916  T
Q  293 acaaaacagacacattaattaca 315  Q
    |||||| ||||||||||||||||    
T  42010915 acaaaatagacacattaattaca 42010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 26121445 - 26121349
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||||||| ||||||    
T  26121445 tcttgaaatatgaaaagtcaagtttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacattaattacactgacaac 26121349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 218 - 381
Target Start/End: Complemental strand, 26999017 - 26998853
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    |||||||| |||| ||||||||||| ||| ||||||||||| ||||||||||  |||||||||||||||||||| |||||| ||| |||||||||| |      
T  26999017 actatcttctcttaaaatatgaaaaatcaaatttaatacacgtacaaacaaaagacaatttcgtaatattaacaaacaaaatagatacattaattataat 26998918  T
Q  318 gacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacatt-aagggacggagggagta 381  Q
    ||||||       ||||||||||||||||  |||||||  ||||||| |||||||||||||||||    
T  26998917 gacaacttttcttaagaaatgtgaaaaagataatggatacctacattaaagggacggagggagta 26998853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 232 - 381
Target Start/End: Complemental strand, 29645466 - 29645316
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnna 331  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||  |||||       |    
T  29645466 aaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaacagatacattaattacactaacaacatttctta 29645367  T
Q  332 agaaatgtg-aaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | ||||||| |||||  ||| ||||| |||||||||||||| |||| ||||    
T  29645366 ataaatgtgaaaaaaaacaacggatgcctacattaagggacagaggaagta 29645316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 94 - 255
Target Start/End: Original strand, 31530988 - 31531149
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta-nnnnnnn 192  Q
    ||||| ||||| |||| ||| |||  |||||||||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||            
T  31530988 tactccctccgtccctatatctaagcacccatttgacttta-ttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttt 31531086  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaata 255  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||| | ||||||||    
T  31531087 cctaaacatacccctaattaatactactaacttgtcttgaaatttgaaaagttaaatttaata 31531149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 312
Target Start/End: Original strand, 48902991 - 48903161
Alignment:
Q  143 cctaaatataaattccttttcaaattactagatgcatttattannnnnnncc-taaacatacccctaattaataccactatcttgtcttgaaatatgaaa 241  Q
    ||||||| |||| ||||||| |||||| |||||||||||||||       || ||||| ||||| |||||||||| ||||  || ||||||||||| |||    
T  48902991 cctaaatctaaactcctttttaaattaatagatgcatttattattttattccctaaacctacccttaattaatactactaatttttcttgaaatattaaa 48903090  T
Q  242 agtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||| |||||||| | |||||||||||  ||||||| ||||||||||||||||||| ||||| |||||||    
T  48903091 agtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacacacaaaatagacaaattaatt 48903161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 124 - 309
Target Start/End: Complemental strand, 31474639 - 31474455
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| ||||||  ||||||||||| || |||| |||||| |||||| ||||||||       |||||||||||||||||||||||| ||||      
T  31474639 atttgactttatttttgtctctaaatataaactcatttttaaattattagatgtatttattatttttt-cctaaacatacccctaattaatactactaat 31474541  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    ||||||| |||| ||||||   | ||||||||||||||||||||||  | |||||  |||||||||| ||||||||||||||||||    
T  31474540 ttgtcttaaaatttgaaaaactaaatttaatacacatacaaacaaatgataatttaataatattaacgcacaaaacagacacatta 31474455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 41825107 - 41825226
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||| ||||||| |||| |||||||| |||||||||| |||| |||| |||||||||||||||||  | ||||| |||||||||||||| |||| ||||    
T  41825107 ccctagttaatactactaacttgtcttaaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttggtaatattaacacataaaatagac 41825206  T
Q  304 acattaattacaccgacaac 323  Q
    ||||||||||||| ||||||    
T  41825207 acattaattacactgacaac 41825226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 351
Target Start/End: Original strand, 34055824 - 34055979
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| ||||||||| || |||||| |||||||||| ||||||||| | |||||| ||||  ||| |||  |||||||| |||||||||||||    
T  34055824 ctaaacatacccataattaatatcattatcttatcttgaaatacgaaaagtcaaagttaatatacat--aaaaaaatgacaatttcataatattaacaca 34055921  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaat 351  Q
    ||||||||||| ||||||||||  |||||        |||||||||||||||||||||    
T  34055922 caaaacagacatattaattacattgacaattttttttaagaaatgtgaaaaaggcaat 34055979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 26243585 - 26243489
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||||||||||||||||||| ||||||||||||||||||||||  |||||||  ||| |||||||||||||||| ||| ||||||||||| ||||||    
T  26243585 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttaataacattaacacacaaaacaaacatattaattacactgacaac 26243489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 144 - 312
Target Start/End: Original strand, 27047090 - 27047256
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    ||||||||||||||| ||||||||||||||||| ||||||||        ||   |  || |||||||||||| | ||  ||||||| |||||| |||||    
T  27047090 ctaaatataaattccatttcaaattactagatgaatttattattttttttctt--ctaactcctaattaatactattaaattgtcttaaaatataaaaag 27047187  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||| ||||||| ||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  27047188 tcaaatttaatgcacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaatt 27047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 29611956 - 29611858
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| ||||||||||||||||||| |||| |||| |||||||||||||||||  | |||||  |||||||||||||||||| |||||||||||||||||    
T  29611956 actaacttgtcttgaaatatgaaatgtcaaatttgatacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaattacac 29611858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 25750628 - 25750552
Alignment:
Q  239 aaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||    
T  25750628 aaaagtcaaatttaatacacatacaaacaaagaacaagttggtaatattaacacacaaaatagacaaattaattaca 25750552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 298
Target Start/End: Complemental strand, 28229311 - 28229207
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| |||||||||| |||| |||||||| |||||| |||||||| |||||||| ||||||||| |||| ||||||| |||||||||| |||    
T  28229311 ctaaacatacccataattaatactactaacttgtcttaaaatattaaaagtcaaatttaatatacatacaaataaaggacaatttggtaatattaataca 28229212  T
Q  294 caaaa 298  Q
     ||||    
T  28229211 taaaa 28229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 52325430 - 52325585
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    ||||||||||| |||||||||||||||       ||||| ||||||| |||||||||   ||| ||| |||||||||||||||| | | || ||||| ||    
T  52325430 ttttcaaattattagatgcatttattattttt--cctaatcatacccttaattaatattgctaacttatcttgaaatatgaaaaataaaatgtaataaac 52325527  T
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||| |||||||| |||||||  ||||||||||||| |||| |||||||||||||||||    
T  52325528 atataaacaaaggacaatttgataatattaacacataaaatagacacattaattacac 52325585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 11344674 - 11344581
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    ||||| ||||||||| |||| ||| |||||||||||||||||| |||||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  11344674 cttgtattgaaatataaaaaatcaaatttaatacacatacaaa-aaagaataatttggtaatgttaacacacaaaatagacacattaattacacc 11344581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 2421231 - 2421131
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||| |||| |||||| |||| ||||||||  ||||| |||||||| |||||||| |||||||||||||  ||||||| |||||||||||||    
T  2421231 cctaaacatacctctaactaatactactaacttgtctttgaatataaaaagtcaaatttaatatacatacaaacaaatgacaattttgtaatattaacac 2421132  T
Q  293 a 293  Q
    |    
T  2421131 a 2421131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 316
Target Start/End: Complemental strand, 11140912 - 11140729
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||| | ||| ||| ||||   ||||||||||||||||||||||||||||       ||||||||| |||||||||||||| ||||      
T  11140912 atttgattttatttttatccctgaatgtaaacctcttttcaaattactagatgcatttattatttttt-cctaaacatgcccctaattaatactactaa- 11140815  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
       |||||||||||| ||||| | |||    |||||||||||||||| | ||||| |||||| |||||||||||||| |||||||| ||||||    
T  11140814 ---tcttgaaatatggaaagttaaatt----acacatacaaacaaaggataatttggtaatactaacacacaaaacatacacattatttacac 11140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 28228385 - 28228250
Alignment:
Q  136 ttttgttcctaaatataaat--tccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaa 233  Q
    |||||| ||||||||||||   | |||||||||||| |||||||||||||||        ||||| |||| | |||||||||| ||||  ||||||||||    
T  28228385 ttttgtccctaaatataaaccattcttttcaaattagtagatgcatttattataatttttctaaatatactcataattaatactactaatttgtcttgaa 28228286  T
Q  234 atatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    | ||||||||||| ||||||||||||||||||||||    
T  28228285 aaatgaaaagtcacatttaatacacatacaaacaaa 28228250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 316
Target Start/End: Original strand, 35765604 - 35765728
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac---atacaaacaaagaacaatttcgtaatattaac 290  Q
    |||||||||||  |||||||||| |||| ||||| ||||||| |||||||||| |||||||||||   ||| |||| |||  |||||| ||||||||||     
T  35765604 ctaaacatacctataattaatactactaacttgttttgaaatttgaaaagtcaaatttaatacacatgatataaac-aaggtcaatttggtaatattaat 35765702  T
Q  291 acacaaaacagacacattaattacac 316  Q
    |||||||||||||| |||||||||||    
T  35765703 acacaaaacagacatattaattacac 35765728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 48901476 - 48901595
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||| ||||| |||||||||| | ||  || |||| |||||| |||||||| |||||||| | |||||||||||  ||||||| |||||||||||||    
T  48901476 cctaaacctacccttaattaatactattaatttttcttaaaatattaaaagtcaaatttaatatatatacaaacaaatgacaatttagtaatattaacac 48901575  T
Q  293 acaaaacagacacattaatt 312  Q
    |||||| ||||| |||||||    
T  48901576 acaaaatagacaaattaatt 48901595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 11396918 - 11396804
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaata--ccactatcttgtcttgaaatatgaaaa 242  Q
    ||||| |||| |||||||||||||| |||||||||||||||       ||||||||||| |||||||||||  | |||| ||| ||||||||||||||||    
T  11396918 taaatgtaaactccttttcaaattattagatgcatttattatttttttcctaaacatacacctaattaatatactactaacttatcttgaaatatgaaaa 11396819  T
Q  243 gtcagatttaataca 257  Q
    |||| ||||||||||    
T  11396818 gtcaaatttaataca 11396804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 54425916 - 54426029
Alignment:
Q  195 taaacatacccct-aattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||| || ||||||||| |||| |  | ||| ||||||||||| | | |||||||||||||| |||||||  ||||||| ||||||||||||||    
T  54425916 taaacataccacttaattaatactactaaccagacttaaaatatgaaaaattaaatttaatacacatataaacaaatgacaatttggtaatattaacaca 54426015  T
Q  294 caaaacagacacat 307  Q
    ||||||||||||||    
T  54426016 caaaacagacacat 54426029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 229 - 313
Target Start/End: Original strand, 37729024 - 37729108
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||||||||||| |||||| ||||||||||||||||||||||  | ||| |  |||||||||||||||||| ||||||||||||||    
T  37729024 ttgaaatatgagaagtcaaatttaatacacatacaaacaaaagataatatgataatattaacacacaaaatagacacattaatta 37729108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 315
Target Start/End: Complemental strand, 48581465 - 48581343
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||| ||||||| ||| | || ||||||| |||||||||||| ||| |||||||||||||| ||| |||| | | |||  ||||||||| ||    
T  48581465 cctaaacatacctctaattagtactattaacttgtctggaaatatgaaaaatcaaatttaatacacataaaaataaaggatagtttgttaatattaatac 48581366  T
Q  293 acaaaacagacacattaattaca 315  Q
    |||||| | ||||||||| ||||    
T  48581365 acaaaataaacacattaactaca 48581343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 314
Target Start/End: Complemental strand, 28243890 - 28243785
Alignment:
Q  209 attaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatt 308  Q
    |||||||| |||| ||| | ||||||||| |||||| | |||||||||||| | |||||||| |||||||  | |||||||||||||||| | |||||||    
T  28243890 attaatactactaacttatattgaaatataaaaagttaaatttaatacacacataaacaaaggacaatttgattatattaacacacaaaataaacacatt 28243791  T
Q  309 aattac 314  Q
    ||||||    
T  28243790 aattac 28243785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 350
Target Start/End: Original strand, 31531448 - 31531541
Alignment:
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||||||||||  |||||||  |||||| ||||||||||||||||||||||||||||| ||||||       ||||||||||||||| ||||    
T  31531448 acatacaaacaaaagacaatttgataatatcaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 31531541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 31826338 - 31826242
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaac 290  Q
    |||||||||||  |||||||||  |||| ||||||||| |||||  ||| ||| ||||||||||||||||||||||||||||||   ||||||||||    
T  31826338 ctaaacataccattaattaatattactaacttgtcttgcaatatacaaaatcaaatttaatacacatacaaacaaagaacaattagataatattaac 31826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 311
Target Start/End: Complemental strand, 39932003 - 39931910
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    |||| |||||||| ||||||||||| | | ||||||||||||||||||||||  |||||||  |||  ||||||||||||| | ||||||||||    
T  39932003 actaacttgtcttaaaatatgaaaactaaaatttaatacacatacaaacaaatgacaatttaataaccttaacacacaaaatatacacattaat 39931910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 12236400 - 12236308
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||| ||||||| |||||||  |||||||||| ||||||| ||||||||||||  ||||||||||||   ||| || |||||||||||||    
T  12236400 cttgtctagaaatattaaaagtcgtatttaatacaaatacaaataaagaacaatttgataatattaacacgtgaaatagccacattaattaca 12236308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 21864410 - 21864331
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacat 307  Q
    |||||||||||||||| ||| |||||||| ||||||||| |||| ||||||| ||||||||| |||| |||| ||||||||    
T  21864410 tcttgaaatatgaaaattcaaatttaatatacatacaaaaaaag-acaatttggtaatattagcacataaaatagacacat 21864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 11345568 - 11345477
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttat 183  Q
    ||||||| ||||| |||| ||| |||  ||||||||||||||| |||||  ||||||| ||||  |||||||||||||||||||| ||||||    
T  11345568 aatactccctccgtccctatatctaagcacccatttgattttatttttgcccctaaatttaaaccccttttcaaattactagatgtatttat 11345477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 29645540 - 29645479
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||||||||| |||||| ||||||| ||||   ||||||||||||||||||||||||||||    
T  29645540 atttgattttatttttgtccctaaatgtaaaccacttttcaaattactagatgcatttatta 29645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 3475670 - 3475606
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||||||||||||| |||||| ||||||||||||   ||||| || ||||||||||||||||||    
T  3475670 acccatttgattttatttttgtccctaaatataaacctctttttaacttactagatgcatttatt 3475606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 287
Target Start/End: Complemental strand, 44647920 - 44647829
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatt 287  Q
    ||||||| ||||||||||||| |  | ||||| ||  |||||||||||||| ||| |||||||||| |||||||  ||||||| ||||||||    
T  44647920 aaacataaccctaattaatactatcaacttgtattacaatatgaaaagtcaaattaaatacacatataaacaaatgacaatttagtaatatt 44647829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 54555897 - 54556006
Alignment:
Q  207 taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacaca 306  Q
    |||||||||| ||||  ||||||| || |||||||||| | | |||||| ||||| |||||||  | ||||| |||| ||||||| | |||| ||||| |    
T  54555897 taattaatactactaatttgtcttaaagtatgaaaagttaaaattaatatacatataaacaaatgataatttggtaaaattaacatataaaatagacata 54555996  T
Q  307 ttaattacac 316  Q
    ||||||||||    
T  54555997 ttaattacac 54556006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 5504604 - 5504689
Alignment:
Q  296 aaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||| ||||||||||||| ||||||       |||||||||||||| || || || || |||||||||||||| |||||||||    
T  5504604 aaacagatacattaattacactgacaacatttcttaagaaatgtgaaaagggaaacgggtgcctacattaagggaccgagggagta 5504689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 322
Target Start/End: Complemental strand, 23157152 - 23157113
Alignment:
Q  283 atattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  23157152 atattaactcacaaaacagacacattaattacactgacaa 23157113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 301
Target Start/End: Original strand, 34056021 - 34056050
Alignment:
Q  272 acaatttcgtaatattaacacacaaaacag 301  Q
    ||||||||||||||||||||||||||||||    
T  34056021 acaatttcgtaatattaacacacaaaacag 34056050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 44698493 - 44698546
Alignment:
Q  207 taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacat 260  Q
    |||||||||| ||||  || |||| ||||||||||||||| |||||||||||||    
T  44698493 taattaatactactaatttatcttaaaatatgaaaagtcaaatttaatacacat 44698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 315
Target Start/End: Original strand, 53717578 - 53717607
Alignment:
Q  286 ttaacacacaaaacagacacattaattaca 315  Q
    ||||||||||||||||||||||||||||||    
T  53717578 ttaacacacaaaacagacacattaattaca 53717607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 6719289 - 6719329
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||||| ||||  |||||||||||||||||||||||||||    
T  6719289 ctaaataaaaatctcttttcaaattactagatgcatttatt 6719329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 11393978 - 11393946
Alignment:
Q  284 tattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||||| |||||||||||||||||    
T  11393978 tattaacacacaaaatagacacattaattacac 11393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 31650683 - 31650743
Alignment:
Q  252 aatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||| ||||||||| |||  ||||||| ||||||||| |||| |||| |||||||||||||    
T  31650683 aatatacatacaaataaatgacaatttggtaatattaccacataaaatagacacattaatt 31650743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 94 - 381
Target Start/End: Original strand, 4089359 - 4089645
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||| |||||| ||||||| |||| || |||| ||||||||||||||||||||||       |    
T  4089359 tactccctccgtccctatatctaaacacccatttgattttatttttgtccctaaatgtaaactctttttaaaattactagatgcatttattatttttt-c 4089457  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||  | ||||||||||||||||||||    
T  4089458 ctaaacatacccctaattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaagataatttcgtaatattaacaca 4089557  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||||| ||||||       |||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  4089558 caaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagtcaatggatgcctacattaagggaaggagggagta 4089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 121 - 388
Target Start/End: Complemental strand, 48767785 - 48767517
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    |||||||||||||| |||||| ||||||| ||||  || |||||||||||||||||||||||||        |||||||||||||||||||||||| | |    
T  48767785 cccatttgattttatttttgtccctaaatgtaaaccccctttcaaattactagatgcatttatttattttttcctaaacatacccctaattaatactaat 48767686  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaa-caaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    | | |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  48767685 aacatgtcttgaaatatgaaaagtcaaatttaatacacatacaaaacaaaggacaatttcgtaatattaacacacaaaacagacacattaattacactga 48767586  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacatcttt 388  Q
    ||||       ||||||||||||||| ||||||| || ||||||||||||||| ||||||||| |||||    
T  48767585 caacgttttttaagaaatgtgaaaaaagcaatgggtgcctacattaagggacgtagggagtacttcttt 48767517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 111 - 381
Target Start/End: Original strand, 48610013 - 48610281
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaat 210  Q
    |||||||||| | ||||||||||| ||||||   ||||| ||||| |||||||||||||||||||||||||||||       | |||||||| |||||||    
T  48610013 tatgtaaatatctatttgattttatttttgtctttaaatgtaaat-ccttttcaaattactagatgcatttattatttttttc-taaacatatccctaat 48610110  T
Q  211 taataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  48610111 taataccactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcgtaatattaatacacaaaacagacacattaa 48610210  T
Q  311 ttacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||  ||||||       || |||||||||||| ||||| ||| ||||||||||||||  |||||||||    
T  48610211 ttacagtgacaacttttcttaaaaaatgtgaaaaatgcaatagatagctacattaagggagagagggagta 48610281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 1324927 - 1324668
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||| |||||| |||||| ||||||| ||||  || ||||||||||||||||| ||||||||       |||||||||||||||||||||||| |||    
T  1324927 cccattttattttatttttgtccctaaatgtaaaccccctttcaaattactagatgaatttattatttttt-cctaaacatacccctaattaatactact 1324829  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||  ||| |||||||||||||||||||||||||||||||| ||     
T  1324828 aacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataagattaacacacaaaacagacacattaattacactgat 1324729  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       ||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  1324728 aacatttcttaagaaatgtgaaaaaggcaatgagtggatacattaagggacagagggagta 1324668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 119 - 371
Target Start/End: Complemental strand, 37673959 - 37673707
Alignment:
Q  119 tacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaatacca 218  Q
    ||||| |||||||||| ||||||  |||||| |||| ||||||| ||||||||||||| ||||||||       | ||||||| |||||||||||||  |    
T  37673959 tacccgtttgattttatttttgtctctaaatgtaaactcctttttaaattactagatgtatttattatttttttcttaaacatgcccctaattaatatta 37673860  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||      
T  37673859 ttatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttcataatattaacacacaaaacagacacattaattacactc 37673760  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggac 371  Q
    |||||       |||||||||||||||| |||||| || ||||||||||||||    
T  37673759 acaacatttcttaagaaatgtgaaaaagacaatgggtgtctacattaagggac 37673707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 120 - 381
Target Start/End: Complemental strand, 49100896 - 49100631
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattcc-ttttcaaattactagatgcatttatt---annnnnnncctaaacatacccctaattaata 215  Q
    ||||||||||||||| |||||| ||||| | ||||  || |||| ||||||||| |||||||||||   |       |||||||||||||||||||||||    
T  49100896 acccatttgattttatttttgtccctaattgtaaaccccctttttaaattactatatgcatttatttttatttttttcctaaacatacccctaattaata 49100797  T
Q  216 ccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
      | ||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  49100796 ttattattttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattaca 49100697  T
Q  316 ccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | ||||||       |||| ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  49100696 ctgacaacttattttaagagatgcgaaaaaggcaatgggtggctacattaagggacagagggagta 49100631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 10685302 - 10685044
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||||||||||||||       | ||||| ||||| |||||||||  |||||    
T  10685302 catttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattatttttttc-taaacgtacccataattaatattactat 10685204  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || ||    
T  10685203 tttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacataaaacagacacattaattacactgataa 10685104  T
Q  323 cnnnnnnnaagaaatgtg-aaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       ||||||| || |||||| |||||  || |||||||||| || ||||||||||    
T  10685103 cttttcttaagaaatatgaaaaaagacaatgagtgcctacattaagagatggagggagta 10685044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 120 - 322
Target Start/End: Complemental strand, 21388463 - 21388261
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| ||||||  |||||| ||||  ||||| |||||||||||||||||||||||       ||||||||||||  |||||||||| ||    
T  21388463 acccatttgattttatttttgtctctaaatgtaaacccctttccaaattactagatgcatttattatttttttcctaaacataccattaattaatactac 21388364  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || ||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21388363 taacttatcttaaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaacagacacattaattacaccga 21388264  T
Q  320 caa 322  Q
    |||    
T  21388263 caa 21388261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 381
Target Start/End: Original strand, 36726057 - 36726318
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaatacca 218  Q
    |||||||||||||| ||||||  |||||| ||||  |  ||||||||||||||||||||||||||         ||||||| |||||||||||||||| |    
T  36726057 cccatttgattttatttttgtctctaaatgtaaacccactttcaaattactagatgcatttattatttttttttcctaaacttacccctaattaatacta 36726156  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
    | | ||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||      
T  36726157 ccaacttgttttgaaatatgaaaagtcaaatttaatacacata-aaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacacta 36726255  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||       |||| ||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  36726256 acaacatctcttaagagatgcgaaaaaggcaatggatgcctacattaagggacggaggaagta 36726318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 35128603 - 35128402
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccacta 221  Q
    |||||||||||| |||||| ||||||| ||||   ||||||||||||||||||||||||||||        || ||||||||||||||||||||| |  |    
T  35128603 catttgattttatttttgtccctaaatgtaaacctcttttcaaattactagatgcatttattattttttttcttaaacatacccctaattaatactatca 35128504  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  35128503 tcttgtcttgaaatatgaaaattcaaatttaatacacatacaaacaaaggacaatttcataatattaacacacaaaacagacatattaattacactgaca 35128404  T
Q  322 ac 323  Q
    ||    
T  35128403 ac 35128402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 200 - 381
Target Start/End: Complemental strand, 36116462 - 36116281
Alignment:
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||||| ||||||||||  | |||||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  36116462 atacctctaattaatattattatcttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacataaaac 36116363  T
Q  300 agacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||||||       |||||||||||||||| ||||| ||| |||||||||||||||||| |||||    
T  36116362 agacacattaattacaccgacaacatttcttaagaaatgtgaaaaagacaatgaatgcctacattaagggacggagagagta 36116281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 19235952 - 19236147
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccact 220  Q
    ||||||| |||| |||||| ||||||| |||| |||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||    
T  19235952 catttgactttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttatttatttattttcctaaacatacccctaattaatactact 19236051  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||    
T  19236052 aacttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaagaacaatatggtaatattaacatacaaaaccgacacattaattacac 19236147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 94 - 381
Target Start/End: Original strand, 2276437 - 2276722
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||  ||||||||||||||| |||||| ||||||| |||||  |||||||||||||||||  ||||| ||        |    
T  2276437 tactccctccgtccctatatataagcacccatttgattttatttttgtccctaaatgtaaatcgcttttcaaattactagacacatttttt--tttcttc 2276534  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| |||||||||| | || ||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  2276535 ctaaacatacccttaattaatactagtaacttatcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacaca 2276634  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||| ||||| ||||| ||||||       ||||||||||||||| | ||  |  |  |||||||||||||||||||||||    
T  2276635 caaaacagacaaattaactacactgacaacttttgttaagaaatgtgaaaaatgtaaaaggagtttacattaagggacggagggagta 2276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 93 - 373
Target Start/End: Original strand, 18121901 - 18122179
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  || ||||||| |||| |||||| ||||||| ||||  |||||| ||||||||||||||||||||||           
T  18121901 atactccctccgtccctatatgtaagcacgcatttgactttatttttgtccctaaatgtaaac-cctttttaaattactagatgcatttattatttttt- 18121998  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||  ||||||||||| |||| ||| |||||||||||||||||||| |||| |||||||| ||||||||| | ||||| |||||||||||||    
T  18121999 cctaaacatacgtctaattaatactactaacttatcttgaaatatgaaaagtcaaattttatacacattcaaacaaaggaaaatttagtaatattaacac 18122098  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacgg 373  Q
    | |||||||||||| |||||||||  |||||       |||||||||||||||| |||||||||  ||||||||| |||||    
T  18122099 ataaaacagacacactaattacactcacaacttttcttaagaaatgtgaaaaagacaatggatgtatacattaagagacgg 18122179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 345
Target Start/End: Original strand, 21809575 - 21809756
Alignment:
Q  164 aaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacataca 263  Q
    |||||||||||||||||||||        | |||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||    
T  21809575 aaattactagatgcatttattttatttttcttaaacatacccctaattaatactactaacttgttttgaaatatgaaaagtcaaatttaatacacataca 21809674  T
Q  264 aacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||       |||||||||||||||    
T  21809675 aacaaaggacaatttagtaatattaacacaaaaaacagacacattaattacatcgacaacttttcttaagaaatgtgaaaaa 21809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 100 - 316
Target Start/End: Complemental strand, 26633087 - 26632871
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaac 199  Q
    ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| || | | ||||||||||||||||||||||||||||       |||||||    
T  26633087 ctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtagacttcttttcaaattactagatgcatttattattactttcctaaac 26632988  T
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||||||||||||||| | ||||  |||||||||||||  |||||||| ||||||| ||||||||||||||  | ||||| |||||||||||||| ||||     
T  26632987 atacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaatttaatgcacatacaaacaaaagataatttagtaatattaacacataaaat 26632888  T
Q  300 agacacattaattacac 316  Q
    ||||||||||| |||||    
T  26632887 agacacattaactacac 26632871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 194 - 345
Target Start/End: Complemental strand, 25750515 - 25750364
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  25750515 ctaaacatacccctaattaatattactaccttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacaca 25750416  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    ||||||||||||||||||||||| ||||||       |||||||||||||||    
T  25750415 caaaacagacacattaattacactgacaactttttttaagaaatgtgaaaaa 25750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 40263857 - 40263729
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||  |    
T  40263857 taaacatagccctaattaatactactatcttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacaatc 40263758  T
Q  295 aaaacagacacattaattacaccgacaac 323  Q
    |||||||||||||||||||||||||||||    
T  40263757 aaaacagacacattaattacaccgacaac 40263729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 124 - 298
Target Start/End: Original strand, 47458075 - 47458248
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||| |||||| |||||| ||||||| |||||||||||| ||||||||| ||||||||||||       ||||||||||||| |||||| ||||||||||    
T  47458075 atttaattttatttttgtccctaaatgtaaattcctttttaaattactaaatgcatttattattttttccctaaacataccc-taattagtaccactatc 47458173  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||||||||| |||  | | ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  47458174 ttgtcttgaaatataaaatattaaatttaatacacatacaaacaaaggacaatttcataatattaacacacaaaa 47458248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 345
Target Start/End: Original strand, 21800944 - 21801165
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttc-aaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||| |||||| ||||||  ||||||||||||  |||||| ||||||||||||||||||| ||       | ||||||||| |||||||||||| | ||    
T  21800944 catttcattttatttttgtctctaaatataaat--cttttctaaattactagatgcatttaatattattttcttaaacatactcctaattaatactatta 21801041  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
      || | ||||||||| |||||||| |||||||||||||||||| |||  ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  21801042 atttattttgaaatataaaaagtcaaatttaatacacatacaaataaatgacaatttagtaatattaacacacaaaacagacacattaattacatcgaca 21801141  T
Q  322 acnnnnnnnaagaaatgtgaaaaa 345  Q
    ||       |||||||||||||||    
T  21801142 acttttcttaagaaatgtgaaaaa 21801165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 315
Target Start/End: Original strand, 29635925 - 29636119
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||| ||| |||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||       |||||||| | |||||| || ||| ||    
T  29635925 acccatgtgactttatttttgtccctaaatgtaaatccattttcaaattattagatgcatttattatttttttcctaaacagatccctaagtagtactac 29636024  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    || |||||||||||||||||||| | | ||| |||||||||| ||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  29636025 taacttgtcttgaaatatgaaaaattaaattaaatacacataaaaacaaagg-caatttggtaatattaacacacaaaacagacacattaattaca 29636119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 124 - 317
Target Start/End: Original strand, 42983502 - 42983695
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| ||||||   |||||||||| || ||||||||||  |||||  ||||||||       ||||||||||||  |||||||||| |||| |    
T  42983502 atttgattttatttttgtctttaaatataaactcattttcaaattgttagatctatttattattattttcctaaacataccattaattaatactactaac 42983601  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |  |||||||  ||||||||||| | |||| ||||||||||||||||||    
T  42983602 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacataagacaatttaataatattaacatataaaagagacacattaattacacc 42983695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 120 - 350
Target Start/End: Complemental strand, 20123666 - 20123441
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| ||||  ||||| |||||||| |||||||||| ||        ||||| ||||  | |||||||||| |     
T  20123666 acccatttgattttatttttgtccctaaatgtaaaccccttt-caaattacaagatgcatttttt-----tttcctaagcatatacttaattaatactaa 20123573  T
Q  220 tatcttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
    || |||||||| ||||| |||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| |    
T  20123572 taacttgtctttgaaatttgaaaattcaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactg 20123473  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||       ||||||||||||||| ||||    
T  20123472 acaacttttcttaagaaatgtgaaaaaagcaa 20123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 316
Target Start/End: Original strand, 6376020 - 6376213
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat- 222  Q
    ||||||||||| |||||| ||||| | ||||||  |||| |||||| |||||| ||||||||       ||||||||||| |||||||||||  | ||      
T  6376020 atttgattttatttttgtccctaactctaaatttttttttaaattattagatgtatttattatttttttcctaaacatactcctaattaataatattaaa 6376119  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||    
T  6376120 cttgtcttaaaatttgaaaagttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacacaaaacagagacattaattacac 6376213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 28663957 - 28663784
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||||| ||||||||| ||  |||| |||||||||||||||||||| |       |||||||||||||||||||||||| ||||  || |||||||||||    
T  28663957 ttgttcttaaatataattttttttttaaattactagatgcatttatgatttttt-cctaaacatacccctaattaatactactaatttatcttgaaatat 28663859  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || |||||| |||||||| ||||||||||||| || |||||  |||||||||||||||||| |||||||||||||    
T  28663858 gagaagtcaaatttaatatacatacaaacaaataataatttgataatattaacacacaaaatagacacattaatt 28663784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 29723678 - 29723421
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||| |||||| ||||||   ||||||||||| | |||| ||||||||||||||||||||||       | |||| ||||  ||||||||||| |||||    
T  29723678 catttaattttatttttgtctttaaatataaatccatttttaaattactagatgcatttattatttttt-cttaaatatacttctaattaatactactat 29723580  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac-aaaacagacacattaattacaccgaca 321  Q
    ||||| |||||||||||||||||| |||||||| | || ||||||||  |  |||||||||||||| ||||| ||||||| |||||||||||||  ||||    
T  29723579 cttgtgttgaaatatgaaaagtcaaatttaatatatatgcaaacaaatgattatttcgtaatattaccacacaaaaacaggcacattaattacaatgaca 29723480  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |        || ||||||||||||| |||||| || ||||||||||||||||||||||||    
T  29723479 a-attttctaaaaaatgtgaaaaagacaatgggtgcctacattaagggacggagggagta 29723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 37048181 - 37048060
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| |||||||||| |||| ||||| |||||||||||| ||| | ||||||||||||||||||||||| ||||||| | || |||||||||    
T  37048181 ctaaacataccc-taattaatactactaacttgtattgaaatatgaatagttaaatttaatacacatacaaacaaaggacaatttgggaacattaacaca 37048083  T
Q  294 caaaacagacacattaattacac 316  Q
    |||||||||||||||||||||||    
T  37048082 caaaacagacacattaattacac 37048060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 138 - 315
Target Start/End: Complemental strand, 40741154 - 40740976
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||||||||||||||||  |||||| ||||||||||| ||||||||||       ||||||||||||||||||||||||  ||| ||| |||||||||||    
T  40741154 ttgttcctaaatataaaccccttttaaaattactagacgcatttattatttttt-cctaaacatacccctaattaatactgctaacttatcttgaaatat 40741056  T
Q  238 gaaaagtcagatttaatacac--atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||||| |||||| ||||  ||||||| |||  | ||||| ||||||||||||||||||| ||||| ||||||||||    
T  40741055 gaaaagtcaaatttaacacacatatacaaagaaatgataatttggtaatattaacacacaaaatagacatattaattaca 40740976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 33181511 - 33181313
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| |||||| | ||||| ||||  || |||||||||| |||||||||||||||       | ||||||||| |||||||||||  ||||     
T  33181511 catttgactttatttttgtccataaatgtaaa--ccctttcaaattattagatgcatttattaattttttcttaaacatactcctaattaatattactaa 33181414  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||| || |||||||||| | ||||||||||||||||||||||  ||||||| |||||||||| | |||||||| ||||||||| ||||| |||||    
T  33181413 cttgtcttaaagtatgaaaagttaaatttaatacacatacaaacaaatgacaatttggtaatattaatatacaaaacaaacacattaactacactgacaa 33181314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 48193764 - 48193640
Alignment:
Q  193 cctaaacatacccc-taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    |||||||||||||| |||||||||| ||||  ||||||||||||||||||||||| |||||||||  ||| |||||||| | ||||| ||||||||||||    
T  48193764 cctaaacataccccctaattaatacaactaatttgtcttgaaatatgaaaagtcaaatttaatactaatataaacaaaggataatttggtaatattaaca 48193665  T
Q  292 cacaaaacagacacattaattacac 316  Q
    ||||||| |||||||||||||||||    
T  48193664 cacaaaatagacacattaattacac 48193640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 31373689 - 31373774
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  31373689 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacacaaaatagacacattaatt 31373774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 145 - 350
Target Start/End: Complemental strand, 23876233 - 23876028
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||| || ||||| |||||| |||||||||||||||       |||||||||||| |||||||||   ||||  ||||||||||||| |||||||    
T  23876233 taaatataagtttctttttaaattattagatgcatttattattattttcctaaacataccactaattaatcatactaatttgtcttgaaatacgaaaagt 23876134  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaa 344  Q
     | ||||||||||||||||||||||  ||||||| |||||||||||||| ||||  |||| ||||| |||||  |||||       ||||||||||||||    
T  23876133 taaatttaatacacatacaaacaaaagacaatttagtaatattaacacataaaatggacatattaactacactaacaactttttttaagaaatgtgaaaa 23876034  T
Q  345 aggcaa 350  Q
    | ||||    
T  23876033 aagcaa 23876028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 378
Target Start/End: Original strand, 43465134 - 43465286
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac-nn 325  Q
    |||||||||||||||||||| ||||||||||||||||||||||  |||||||   |||| |||||||||||||||||||||||||||||| ||||||       
T  43465134 tcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgaaaatactaacacacaaaacagacacattaattacactgacaacact 43465233  T
Q  326 nnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggaggga 378  Q
         || |||| ||||||||| |||| ||| ||||||||| |||||||||||    
T  43465234 tcttaaaaaaatatgaaaaaggtaatgaatgactacattaaaggacggaggga 43465286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 312
Target Start/End: Original strand, 46783742 - 46783917
Alignment:
Q  136 ttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaat 235  Q
    |||||| ||||||| |||| ||| |||||| ||||||||| |||||||||        |||||||| | | |||||||||| |||| ||| |||||||||    
T  46783742 ttttgtccctaaatgtaaactccatttcaacttactagatacatttattatgttttttctaaacatgctc-taattaatactactaacttatcttgaaat 46783840  T
Q  236 atgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||||| ||||||||||||||| ||||||  ||||||| |||||||||||||| || | |||||||||||||    
T  46783841 atgaaaagtcaaatttaatacacatacgaacaaaagacaatttggtaatattaacacataagatagacacattaatt 46783917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 5334365 - 5334475
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||||  | | ||| |||||||||||| |||||||| ||||    
T  5334365 ctaattaataccactaatttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaatgatagtttggtaatattaacatacaaaacaaacac 5334464  T
Q  306 attaattacac 316  Q
    |||||||||||    
T  5334465 attaattacac 5334475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 37491576 - 37491695
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||  || |  ||| ||||||||||||||||||| |||||||||| |||||||||||| | ||||| ||||||||||||     
T  37491576 cctaaacatacccctaattaatattacaaatttgccttgaaatatgaaaagtcaaatttaatacatatacaaacaaaggataatttggtaatattaacat 37491675  T
Q  293 acaaaacagacacattaatt 312  Q
    | |||| |||||||||||||    
T  37491676 ataaaatagacacattaatt 37491695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 10408527 - 10408641
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| ||| ||||||||||||||||||||||| |||| || |||| ||| ||||||    
T  10408527 taaacatacccctaattaatactactaacttgcattgaaatatgaaaaatcaaatttaatacacatacaaacaaaggacaaattagtaaaattcacacac 10408626  T
Q  295 aaaacagacacatta 309  Q
    |||  ||||||||||    
T  10408627 aaactagacacatta 10408641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 21759967 - 21759792
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| |||||||  | |||||||||||||  ||||| ||||||| |||| ||  ||||||||||||||||||||||||||       |    
T  21759967 tactccctccgtccctatatgtaagaatccatttgattttatgtttgtccctaaatgtaaactctatttcaaattactagatgcatttattacttttttc 21759868  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||||||| |||||||| | ||||  ||||||||||||| ||||||| | ||||||||| ||| ||||||||    
T  21759867 ctaaacatacccgtaattaatcctactaatttgtcttgaaatacgaaaagttaaatttaatacccattcaaacaaa 21759792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 346
Target Start/End: Original strand, 27162815 - 27163012
Alignment:
Q  148 atataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa-gtca 246  Q
    |||||||  |||||||||||||||| ||||||||||||       |||||||||||  ||||||||||| | || |||||||||||||||||||| || |    
T  27162815 atataaacaccttttcaaattactaaatgcatttattatttttttcctaaacatacttctaattaatactattaacttgtcttgaaatatgaaaaagtta 27162914  T
Q  247 gatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaag 346  Q
     ||||||||||||||||||||||  ||||||| | |||||||| |||||||| |  |||||||||| |||  |||||       ||||||||||||||||    
T  27162915 aatttaatacacatacaaacaaatgacaatttggcaatattaaaacacaaaata--cacattaattgcactaacaactttacttaagaaatgtgaaaaag 27163012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 35960525 - 35960407
Alignment:
Q  195 taaacatacccctaattaatac-cactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||| |||||||||||||||  | ||||| ||||||| || |||    
T  35960525 taaacatacccctaattaatacacactaacctgtcttgaaatatgaaaagtcaaatttaacacacatacaaacaaaagataatttagtaatataaataca 35960426  T
Q  294 caaaacagacacattaatt 312  Q
     |||| |||||||||||||    
T  35960425 taaaatagacacattaatt 35960407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 21392853 - 21392969
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    |||||||| |||||||||  | |||| | ||||||||||||| |||||||| ||||||||||||||||||||||  | ||||| ||||||||||||| ||    
T  21392853 aaacatactcctaattaaatctactaacatgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaatataatttggtaatattaacactca 21392952  T
Q  296 aaacagacacattaatt 312  Q
    ||| |||||||||||||    
T  21392953 aaatagacacattaatt 21392969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 26200938 - 26201044
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| |||| ||||| || ||||||||||||| | ||||||||||||||||||||||||| |||||  ||||||||| |||||||| ||||||    
T  26200938 ctaattaatactactaacttgttttaaaatatgaaaagttaaatttaatacacatacaaacaaagaataatttgataatattaatacacaaaatagacac 26201037  T
Q  306 attaatt 312  Q
    | |||||    
T  26201038 aataatt 26201044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 309
Target Start/End: Complemental strand, 27213628 - 27213519
Alignment:
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    |||| |||||| ||||| | || ||||||||||||||||||| ||||  ||||||| |||||||||||||| ||||||| |||||||||||||||||||     
T  27213628 atactcctaataaatactattaacttgtcttgaaatatgaaatgtcaattttaatagacatacaaacaaaggacaatttagtaatattaacacacaaaat 27213529  T
Q  300 agacacatta 309  Q
    ||||| ||||    
T  27213528 agacatatta 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 24700653 - 24700751
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    |||||| ||| || |||||||||| |||| ||| | ||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||    
T  24700653 cctaaatatatccttaattaatactactaacttattttgaaatatgaaaagtcaacattaatacacatacaaacaaagaacaatttggtaatattaaca 24700751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 28038815 - 28038950
Alignment:
Q  163 caaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatac 262  Q
    |||||||||||||| ||||||||       ||||||||||  | ||||||||||  ||| |||||||||||||||||||||| | |||||||||| ||||    
T  28038815 caaattactagatgtatttattatgtttttcctaaacatattcataattaatactgctaacttgtcttgaaatatgaaaagttaaatttaatacaaatac 28038914  T
Q  263 aaac-aaagaacaatttcgtaatattaacacacaaa 297  Q
    |||| ||| ||| |||| ||||||||||||||||||    
T  28038915 aaacaaaaaaaccatttggtaatattaacacacaaa 28038950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 43601147 - 43601243
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||| | ||| ||||||||||||| | |||||||    
T  43601147 actaacttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattttgtaatacttaca-acaaaacagacacctcaattaca 43601243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 13907673 - 13907785
Alignment:
Q  166 attactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaa 265  Q
    ||||||||||| ||||||||       |||||||| ||||||||||||||| |||| |||||||| ||||||||||||||| ||||| || |||||||||    
T  13907673 attactagatgtatttattaattttttcctaaacacacccctaattaatactactaacttgtctttaaatatgaaaagtcaaatttattaaacatacaaa 13907772  T
Q  266 caaagaacaattt 278  Q
    ||||  |||||||    
T  13907773 caaatgacaattt 13907785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 37136385 - 37136253
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaata 236  Q
    |||| ||||||||||||   ||||||||||||||||| ||||| ||||        ||||||||||||||||||||||| | ||| ||| |||| |||||    
T  37136385 ttgtccctaaatataaacctcttttcaaattactagacgcattcattattatttttcctaaacatacccctaattaatatcgctaacttatcttaaaata 37136286  T
Q  237 tgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||||| |||||| |||||||||||||||    
T  37136285 tgaaaagtcaaatttaacacacatacaaacaaa 37136253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 40211295 - 40211357
Alignment:
Q  254 tacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  40211295 tacacatacaaataaatgacaatttcgtaatattaacacacaaaacagacacattaattacac 40211357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 27170157 - 27170041
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    ||||||||| | |||||||||| | ||  ||||||||||||||||||||||| |||||||| |||||  ||||||  ||||||| |||||||| ||||||    
T  27170157 taaacatactcataattaatactattaatttgtcttgaaatatgaaaagtcaaatttaatagacatatgaacaaatcacaatttggtaatatt-acacac 27170059  T
Q  295 aaaacagacacattaatt 312  Q
    |||| ||||| |||||||    
T  27170058 aaaatagacaaattaatt 27170041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 315
Target Start/End: Original strand, 44648607 - 44648796
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccacta 221  Q
    |||||||||||| |||||||||||| | ||||||| ||||||||| |||| ||||||||||||        || |||| ||||| ||| |||||| |       
T  44648607 catttgattttatttttgttcctaattgtaaattcattttcaaat-actaaatgcatttattattatttttcttaaacgtacccttaactaatacta--- 44648702  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgt--aatattaacacacaaaacagacacattaattaca 315  Q
      ||||||||||||||||||| ||| ||||||||||||||||||| ||  |||||||  |  |||||||||| |||||| ||||||||| ||||||    
T  44648703 --ttgtcttgaaatatgaaaaatcaaatttaatacacatacaaactaaagacaatttgatccaatattaacatacaaaatagacacattgattaca 44648796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 38729650 - 38729724
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||| |||||||||||||||| ||||| |||||||| ||||||||||| | | ||||||||||||||||||||||    
T  38729650 taaatatacccctaattaatatcactagcttgtcttaaaatatgaaaaataaaatttaatacacatacaaacaaa 38729724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 21752640 - 21752557
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||| |||||||||| ||||||||||||||||||||||  | ||||| ||||||||||| ||||||| | ||| |||||||    
T  21752640 ttgaaatgtgaaaagtcaaatttaatacacatacaaacaaatgataatttggtaatattaacccacaaaataaacaaattaatt 21752557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 2409872 - 2409973
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||| ||||||||||| | ||  || ||||||||||||||||| || |||||||| ||||||||| |||| |||| || |||||||| ||| ||    
T  2409872 taaacatacctctaattaatactattaatttttcttgaaatatgaaaagacaaatttaatatacatacaaataaaggacaacttagtaatattcacatac 2409971  T
Q  295 aa 296  Q
    ||    
T  2409972 aa 2409973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 42993179 - 42993264
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||   |||||  ||||||||||||| |||| |||||| ||||||    
T  42993179 tcttgaaatatgaaaaatcaaatttaatacacatactaacaaaggttaatttgataatattaacacataaaatagacacgttaatt 42993264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 10595113 - 10595211
Alignment:
Q  250 ttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggca 349  Q
    ||||||||||||||||||||  ||| |||||||||  |||||||||||||||||| |||||||| || ||||||       ||||||||||||||| |||    
T  10595113 ttaatacacatacaaacaaaagacagtttcgtaat--taacacacaaaacagacatattaattatactgacaacttttcttaagaaatgtgaaaaacgca 10595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 19477115 - 19477224
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaa 241  Q
    ||||||||||||| ||||||| |||||||||| |||||||||         |||||| ||| ||||||||||||| ||||  || |||||||||||||||    
T  19477115 ctaaatataaatttcttttcagattactagattcatttattattgttttttcctaaatatatccctaattaatactactaatttatcttgaaatatgaaa 19477214  T
Q  242 agtcagattt 251  Q
    ||||| ||||    
T  19477215 agtcaaattt 19477224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 4068489 - 4068428
Alignment:
Q  251 taatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||||||||| |||||  ||||||||||| |||||| ||| | |||||||    
T  4068489 taatacacatacaaacaaagaataatttgataatattaacatacaaaatagatatattaatt 4068428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 8318750 - 8318689
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttat 183  Q
    ||||||||  ||| |||||| ||||||| ||||  |||||||||||||||||||||||||||    
T  8318750 ccatttgacgttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttat 8318689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 41672591 - 41672647
Alignment:
Q  260 tacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||| | ||||| || ||||| |||||||||| |||||||||||||||||    
T  41672591 tacaaacaaaggataatttagttatattcacacacaaaatagacacattaattacac 41672647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 29993211 - 29993085
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat---cttgtcttgaaatatgaaa 241  Q
    |||||||||| |  |||| ||| ||||||||||||||||||       |||||||||||| ||||||||||| ||||    ||||| |||||||||||||    
T  29993211 taaatataaacttatttttaaaatactagatgcatttattattattt-cctaaacataccactaattaatactactagtaacttgttttgaaatatgaaa 29993113  T
Q  242 agtcagatttaatacacatacaaacaaa 269  Q
    ||| | |||||| | ||| |||||||||    
T  29993112 agttaaatttaacaaacacacaaacaaa 29993085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 39102739 - 39102798
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaata 255  Q
    ||||||| ||||||||||||| |||| ||||||||| ||||| |||||||| ||| ||||    
T  39102739 aaacataaccctaattaatactactaacttgtcttggaatataaaaagtcaaattaaata 39102798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 25099003 - 25099053
Alignment:
Q  331 aagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||| |||||||  || || ||||||||||||||||||||    
T  25099003 aagaaatgtgaaaaatgcaatggggggttatattaagggacggagggagta 25099053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 29993082 - 29993004
Alignment:
Q  234 atatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||||| | |||||| | ||| |||||||||  | ||||| ||| |||||||| |||||| |||||||||||||    
T  29993082 atatgaaaagttaaatttaacaaacacacaaacaaatgataatttggtagtattaacatacaaaatagacacattaatt 29993004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 5333769 - 5333846
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttat 183  Q
    |||| |||||||| |  ||||||| |||| |||||| ||||||| ||||  |||||| ||||||||||||| ||||||    
T  5333769 ccctatatgtaaacatacatttgactttatttttgtccctaaatgtaaacccctttttaaattactagatgtatttat 5333846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 19477411 - 19477496
Alignment:
Q  235 tatgaaaagtcagatttaatacacatacaaac----aaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||  |||||||||||||||||||    ||| |||||||| |||| ||||||| | |||| | || ||||||||||||    
T  19477411 tatgaaaagtcgaatttaatacacatacaaacaaaaaaaaaacaatttggtaacattaacatataaaataaacgcattaattacac 19477496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 20123660 - 20123692
Alignment:
Q  349 aatggatggctacattaagggacggagggagta 381  Q
    ||||| |||||||||||||||||||||||||||    
T  20123660 aatgggtggctacattaagggacggagggagta 20123692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 20124335 - 20124291
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||||||||||||||||| ||||| |||| ||| |||||||||||    
T  20124335 cctaaacatacccctaataaatactactaacttttcttgaaatat 20124291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 92)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 109 - 381
Target Start/End: Original strand, 9718045 - 9718317
Alignment:
Q  109 tgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccccta 208  Q
    ||||| |||||  ||||||||||||| ||||||| |||||| ||||  || |||||||||| |||||||||||||||       ||||||||||||| ||    
T  9718045 tgtatataaatctccatttgattttatttttgtttctaaatgtaaacaccctttcaaattattagatgcatttattatttttttcctaaacataccctta 9718144  T
Q  209 attaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatt 308  Q
    |||||||| |||| |||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  9718145 attaatactactaacttgtcttgaaatacgataagacaaatttaatacacatacaaacaaagaataatttggtaatattaacacacaaaacagacacatt 9718244  T
Q  309 aattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||| ||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9718245 aattacactgacaacatttcttaagaaatgtgaaaaatgcaatggatggctacattaagggacggagggagta 9718317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 122 - 381
Target Start/End: Complemental strand, 44424812 - 44424555
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||||| ||||  | ||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||    
T  44424812 ccatttgattttatttttgtccctaaatgtaaaccctttttcaaattactagatgcatttatt--ttttttcctaaacatacccctaattaatactacta 44424715  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||    
T  44424714 tcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactaaca 44424615  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||       ||||||||||||||| ||||||  || ||||||||||||||||||||||||    
T  44424614 acttttcttaagaaatgtgaaaaatgcaatgagtgcctacattaagggacggagggagta 44424555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 15851752 - 15851491
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccac 219  Q
    |||||||||||||| |||| | ||||||| |||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||    
T  15851752 cccatttgattttatttttctccctaaatgtaaactccttttcaaattactagatgcatttattattatttttcctaaacatacccctaattaatactac 15851653  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||| ||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||  |    
T  15851652 tattttgtcttgaaatatgaaaattcaaatttaatacacatataaacaaaggacaatttcataatattaacacaaaaaacagacacattaattacactca 15851553  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||       |||||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  15851552 caacttttcttaagaaatgtgaaaaagacaatagatgtctacattaagggacagagggagta 15851491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 94 - 384
Target Start/End: Complemental strand, 17663871 - 17663581
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||       |    
T  17663871 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 17663772  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||| | ||||  |||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  17663771 ctaaacatacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 17663672  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacat 384  Q
     |||| || ||||||||||||||  |||||       ||||||||||||||| |||| ||  || |||||  |||||||||||||||||||    
T  17663671 taaaataggcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagtacat 17663581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 106 - 316
Target Start/End: Complemental strand, 27297812 - 27297602
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| ||| ||| |||| ||||||||||| |||||| | ||||| |||| |||||||||||||| |||||||||||||||       |||||||||| ||    
T  27297812 ccctatatctaagtaccaatttgattttatttttgtccttaaatgtaaactccttttcaaattagtagatgcatttattatttttttcctaaacatatcc 27297713  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  27297712 ctaattaatactactatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacac 27297613  T
Q  306 attaattacac 316  Q
    |||||||||||    
T  27297612 attaattacac 27297602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 121 - 381
Target Start/End: Original strand, 8064958 - 8065217
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||||| |||| | |||| ||||||| ||||  || |||||||||||||||| ||||||||        |||||||||||||||||||||||| |||    
T  8064958 cccatttgactttattattgtccctaaatgtaaaccccctttcaaattactagatacatttatt-catttttcctaaacatacccctaattaatactact 8065056  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | |||||||||||||||||||| ||| | ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| |||    
T  8065057 aacttgtcttgaaatatgaaaaatcaaagttaatacacatacaaacaaaggataatttggtaatattaacacacaaaacagacacattaattacactgac 8065156  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       | |||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  8065157 aacatttcttaggaaatgtgaaaagggcaatgggagcctacattaagggacggagggagta 8065217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 120 - 374
Target Start/End: Original strand, 31644327 - 31644580
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||       |||||||||||||||||||||||| ||    
T  31644327 acccatttgattttatttttgtccctaaatgtaaactcattttcaaattactagatgcatttattatttttt-cctaaacatacccctaattaatactac 31644425  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||| || ||||||| |||||||| ||| ||||||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||||||| || ||    
T  31644426 tattttatcttgaattatgaaaaatcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacaaaaaacagacacattaattaaactga 31644525  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacgga 374  Q
     |||       |  ||||||||||||| ||||||||| ||||||||| |||||||    
T  31644526 taacttttcttataaaatgtgaaaaagacaatggatgcctacattaaaggacgga 31644580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 120 - 347
Target Start/End: Complemental strand, 37355258 - 37355030
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaatacca 218  Q
    ||||||||||||||| ||||||  |||||||||||  |||||||||||||||||||||||||||||        ||||||||||||| ||||||||||      
T  37355258 acccatttgattttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatttattttcctaaacatacccttaattaatactt 37355159  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||      
T  37355158 ttatcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaagagacacattaattacacaa 37355059  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaagg 347  Q
    |||||       |||||||||||||||||    
T  37355058 acaacttttcttaagaaatgtgaaaaagg 37355030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 41665928 - 41665671
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||||| |||| |||||| ||||||| |||| ||  |||||||||||||||||| ||||||        |||||||||||||||||||||||| | |    
T  41665928 cccatttgactttatttttgtccctaaatgtaaactctctttcaaattactagatgcttttatt--ttttttcctaaacatacccctaattaatactatt 41665831  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||| |||    
T  41665830 aacttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaatttgatactattaacacacaaaacagacacattaattacactgac 41665731  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       |||||||||||||||  |||||  || |||||||||||||||||| |||||    
T  41665730 aacatttcttaagaaatgtgaaaaa-acaatgagtgcctacattaagggacggagagagta 41665671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 3237934 - 3237749
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||||| |||| ||||||| |||||||||||||||||| ||          |||||||| ||||||||||||| ||||    
T  3237934 ccatttgattttatttttgtccctaaatgtaaactcctttttaaattactagatgcatttttttt--------taaacatatccctaattaatactacta 3237843  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  3237842 tcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataattttgtaatattaacacacaaaacagacacattaattaca 3237749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 111 - 381
Target Start/End: Original strand, 17250835 - 17251106
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaa 209  Q
    |||||||| || ||||| |||||| ||||||  |||||| |||| ||||||| ||||||||| ||||||||||||        ||||||||||||  |||    
T  17250835 tatgtaaacactcatttaattttatttttgtctctaaatgtaaactcctttttaaattactatatgcatttattattttttttcctaaacatacctttaa 17250934  T
Q  210 ttaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  17250935 ttaatactactatcttgtcttgaaatatgaaaagtcaatttaaatacacatacaaacaaatgacaattttgtaatattaacacacaaaacagacacatta 17251034  T
Q  310 attacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||| ||  |||||       || ||||||||||||| |||| |||  |||||||||| |||||||||||||    
T  17251035 attatactaacaacttttcttaaaaaatgtgaaaaagacaatagatacctacattaagagacggagggagta 17251106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 94 - 316
Target Start/End: Complemental strand, 20362229 - 20362008
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||       |    
T  20362229 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattttc 20362130  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||| | ||||  |||||||||||||  |||||||| |||| |||||||||||||||||| ||||||| ||||||||||||||    
T  20362129 ctaaacatacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaattt-atacacatacaaacaaaggacaatttagtaatattaacaca 20362031  T
Q  294 caaaacagacacattaattacac 316  Q
     |||| ||||||||||| |||||    
T  20362030 taaaatagacacattaactacac 20362008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 124 - 359
Target Start/End: Complemental strand, 34330217 - 34329984
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| ||||||   ||||| |||| |||||||||||||||||||||||||||||        |||||||||| |||| |||||||| ||||||    
T  34330217 atttgattttatttttgtctataaatgtaaactccttttcaaattactagatgcatttatt--ttttttcctaaacatatccctgattaatactactatc 34330120  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||| ||  |||||    
T  34330119 ttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaaggacaattttgtaatattaacacacaaaacaggtacattaattatactaacaac 34330020  T
Q  324 nnnnnnnaagaaatgtgaaaaaggcaatggatggct 359  Q
           |||||||||||||||| ||||||||||||    
T  34330019 tttttttaagaaatgtgaaaaagacaatggatggct 34329984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 120 - 381
Target Start/End: Complemental strand, 28734044 - 28733785
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| ||||||| ||||   ||||||||||||||| ||||||||||||       |||||||||||||||||||||||| ||    
T  28734044 acccatttgactttatttttgtccctaaatctaaacctcttttcaaattactatatgcatttattattgttttcctaaacatacccctaattaatactac 28733945  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||  || ||||||||||| |||||||| |||| |||||||||||||||||  ||||||| |||||||||  ||| |||||||||||||||||||||||||    
T  28733944 taatttatcttgaaatataaaaagtcaaattttatacacatacaaacaaatgacaatttggtaatatta--acataaaacagacacattaattacaccga 28733847  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||        || |||||||||||||  ||||| || ||||||||||||||| ||||||||    
T  28733846 caatttttcttaaaaaatgtgaaaaagaaaatgggtgcctacattaagggacgaagggagta 28733785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 122 - 352
Target Start/End: Original strand, 1246298 - 1246529
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||| |||||| |||||  | ||||||||||   ||||||||||||||| || |||||||||        ||||||||||||||||||||||| | ||    
T  1246298 ccatttaattttatttttgcccttaaatataaaccacttttcaaattactaaatacatttattattatttttctaaacatacccctaattaatactatta 1246397  T
Q  222 tcttgtcttgaaatatgaaaa-gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| || |||    
T  1246398 tcttgtcttgaaatatgaaaaagtcaaatttaatacacatacaaacaaagaacaatttcataatattaacacacaaaacaaacacgttaattatactgac 1246497  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatg 352  Q
    |||       |||||||||||||||| |||||    
T  1246498 aactttttttaagaaatgtgaaaaagacaatg 1246529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 41865933 - 41865676
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||||||||||| ||||  ||||||||||||| |||||||||||||||       |||||||||||||||||| ||||  ||||     
T  41865933 catttgattttatttttgttcctaaatgtaaacaccttttcaaattattagatgcatttattatttttttcctaaacatacccctaataaatattactaa 41865834  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||| |||||| |||||||| ||||||||||||||||||| ||| | ||||| ||||| ||||||||||||| |||||||||||||| ||| ||||    
T  41865833 cttgtcttaaaatataaaaagtcaaatttaatacacatacaaac-aaggataatttggtaatgttaacacacaaaatagacacattaattagaccaacaa 41865735  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       ||||||||||||||| ||||  |  |  |||||||||||| ||||||||||    
T  41865734 cttttcttaagaaatgtgaaaaaagcaaaaggggcttacattaagggaaggagggagta 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 24775084 - 24774890
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||||| |||||  |||||| |||||||||||  ||||||||       ||||||||||||||  |||| ||| ||||    
T  24775084 ccatttgattttatttttgtccctaaatttaaatctcttttcgaattactagatatatttattatttttttcctaaacatacccccgattagtactacta 24774985  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||| |||||||||||||    
T  24774984 acttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagatacattaattacac 24774890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 122 - 321
Target Start/End: Complemental strand, 7255818 - 7255621
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||| ||| |||| |||| | ||||||||||||  || ||||||||||||||||| ||||||||       |||||||||| ||||||||||||| ||||    
T  7255818 ccatctgactttatttttatccctaaatataaa--ccctttcaaattactagatgtatttattattattttcctaaacatatccctaattaatactacta 7255721  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
      ||||||||||||||||||||||| |||||||||||| |||| ||||| | ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  7255720 atttgtcttgaaatatgaaaagtcaaatttaatacacaaacaatcaaaggataatttggtaatattaatacacaaaacagacacattaattacaccgaca 7255621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 316
Target Start/End: Complemental strand, 247909 - 247685
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    ||||||| ||||| |||| ||| |||  |||||||||| |||| |||| |  |||||| |||| |||||||||||||| |||||||| ||||||          
T  247909 aatactccctccgtccctatatctaagcacccatttgactttagttttatctctaaatgtaaactccttttcaaattagtagatgcaattattatttttt 247810  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||| |||||||| |||| ||||| |||| |||||||||| ||||||||||||| |||||||| ||||||||||||||  ||||||  |||||||||||    
T  247809 ccctacacatacccttaatcaatactactaacttgtcttgagatatgaaaagtcaaatttaatatacatacaaacaaagggcaattttataatattaaca 247710  T
Q  292 cacaaaacagacacattaattacac 316  Q
    ||||||| |||||||||||||||||    
T  247709 cacaaaatagacacattaattacac 247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 94 - 312
Target Start/End: Original strand, 40345934 - 40346157
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn- 192  Q
    ||||| ||||| |||| ||| |||| || ||||| |||||| |||||||||||||| |||| |||||||||||||||||||| |||||||||            
T  40345934 tactctctccgtccctatatctaaacactcattttattttatttttgttcctaaatgtaaactccttttcaaattactagatacatttattatttttttt 40346033  T
Q  193 ----cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatta 288  Q
        |||||||||||||||||||||||| || | |||| ||||||||||||||||||| |||||||||||||||||| |||  ||||||| |||||||||    
T  40346034 ccttcctaaacatacccctaattaatactacaaacttgccttgaaatatgaaaagtcaaatttaatacacatacaaataaaagacaatttagtaatatta 40346133  T
Q  289 acacacaaaacagacacattaatt 312  Q
    ||||||||||   |||||||||||    
T  40346134 acacacaaaatgaacacattaatt 40346157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 111 - 313
Target Start/End: Complemental strand, 4758256 - 4758054
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaat 210  Q
    |||||||  |||| |||||||||| ||||||| |||||| |||||| ||||||| |||| |||||||||||||||       ||||||||||  ||||||    
T  4758256 tatgtaaccacccgtttgattttatttttgtttctaaatgtaaatttcttttcagattattagatgcatttattatttttttcctaaacatattcctaat 4758157  T
Q  211 taataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||| ||||  || |||| ||||||| ||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||| | |||||||||    
T  4758156 taatactactaatttttcttaaaatatgtaaagtcaaatttaatacacataaaaacaaaggacaatttcataatattaacacacaaaataaacacattaa 4758057  T
Q  311 tta 313  Q
    |||    
T  4758056 tta 4758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 125 - 377
Target Start/End: Complemental strand, 13534621 - 13534379
Alignment:
Q  125 tttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatct 224  Q
    |||||||||| |||| |  |||||| |||||||| |||||||||||||||||| |||||||       |||||||||| ||||||||||||| |||| ||    
T  13534621 tttgattttatttttttctctaaatttaaattccatttcaaattactagatgcgtttattaattttttcctaaacatatccctaattaatactactaact 13534522  T
Q  225 tgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacn 324  Q
    |||||||||||||||||||||| |||||||  |||||||||| ||| | |||       ||||||||||||||||| ||||||||||||||| ||||||     
T  13534521 tgtcttgaaatatgaaaagtcaaatttaat--acatacaaaccaaggataat-------tattaacacacaaaacaaacacattaattacactgacaaca 13534431  T
Q  325 nnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggaggg 377  Q
          |||||||||| |||||||||| | || ||||||||||||||||||||    
T  13534430 tttcttaagaaatgtg-aaaaggcaataggtgcctacattaagggacggaggg 13534379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 193 - 350
Target Start/End: Complemental strand, 11459301 - 11459144
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||| | |||||||||| |||| ||||||||||||| |||||| ||| |||||||||| |||||||||||| ||||||| |||||||||||||    
T  11459301 cctaaacatactcttaattaatactactaacttgtcttgaaatttgaaaaatcaaatttaatacatatacaaacaaaggacaatttagtaatattaacac 11459202  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    ||||||||||||||||| |||||||||||||       ||||||||||||||| ||||    
T  11459201 acaaaacagacacattatttacaccgacaacttttcataagaaatgtgaaaaaagcaa 11459144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 123 - 316
Target Start/End: Complemental strand, 14420894 - 14420702
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| ||||||| |||||| ||||   ||||||| ||||||||||||||||||||       ||||||||||| |||||||||||| | ||     
T  14420894 catttgactttatttttgtttctaaatgtaaacctcttttcagattactagatgcatttattattttaatcctaaacatactcctaattaatactaataa 14420795  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    | ||||||||||| |||||||| | ||| ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  14420794 catgtcttgaaatttgaaaagttaaatt-aatacacatgcaaacaaaggacaatttggtaatattaacacacaaaacagacacattaattacac 14420702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 129 - 316
Target Start/End: Original strand, 2521193 - 2521380
Alignment:
Q  129 attttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtc 228  Q
    |||||| ||||||| |||||| |||||| ||||||||||| ||||||||||||||||       |||||||||||||||||||||| | ||||  |||||    
T  2521193 attttatttttgtttctaaatgtaaatttcttttcaaattgctagatgcatttattattattttcctaaacatacccctaattaatcctactaatttgtc 2521292  T
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||  |||||||| ||||||||||||||||||||||  |||||||  |||||||| |||| |||| ||||||||||| |||||    
T  2521293 ttgaaatacaaaaagtcaaatttaatacacatacaaacaaaagacaatttaataatattaccacataaaatagacacattaactacac 2521380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 124 - 322
Target Start/End: Original strand, 7278501 - 7278699
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||| |  |||||| ||||| |||||||||||||||||||||||||||||       | |||||||||||||||||||||| |||| |    
T  7278501 atttgattttatttttatctctaaatgtaaatcccttttcaaattactagatgcatttattattattttcttaaacatacccctaattaatactactaac 7278600  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    || ||||||||||| || ||||| |||||||||||||||||||||||  ||||||  ||||||   ||||||||||| ||| ||||||||||| |||||    
T  7278601 ttatcttgaaatattaatagtcaaatttaatacacatacaaacaaagggcaatttgataatatattcacacaaaacaaacatattaattacactgacaa 7278699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 207 - 381
Target Start/End: Original strand, 35178764 - 35178938
Alignment:
Q  207 taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacaca 306  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||| |||  ||||||||||||||||| ||||||||||| |||||    
T  35178764 taattaatactactatcttgccttgaaatatgaaaagtcaaatttaatacaaatacaaataaaagacaatttcgtaatattatcacacaaaacatacaca 35178863  T
Q  307 ttaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||| ||||| ||||||       |||||||||||||||  |||||| || ||||||||||||| | ||||||||    
T  35178864 ttaactacactgacaacttttcttaagaaatgtgaaaaaaacaatgggtgcctacattaagggatgaagggagta 35178938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 350
Target Start/End: Complemental strand, 45214906 - 45214716
Alignment:
Q  160 tttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacaca 259  Q
    |||||||||||||||| |||||||||       | |||||||||||||||||||||| ||||  || |||| ||||||||||||| | ||||||||||||    
T  45214906 tttcaaattactagatacatttattatttttttcttaaacatacccctaattaatactactaatttatcttaaaatatgaaaagttaaatttaatacaca 45214807  T
Q  260 tacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||||||||  ||||||   ||||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||| ||||    
T  45214806 tacaaacaaagggcaatttgaaaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaatgcaa 45214716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 123 - 312
Target Start/End: Complemental strand, 11071887 - 11071697
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccact 220  Q
    ||||||| |||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||         ||||||||| |||||||||||||  |||    
T  11071887 catttgactttatttttgtccctaaatctaaactccttttcaaattactagatgcatttattattattttttcctaaacatgcccctaattaatattact 11071788  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    | || || |||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||| |||  |||||||||||||    
T  11071787 aact-gttttgaaatatgaaaagtcaaatttaatacacatacaagcaaaggacaatttagtaatattaacacataaattagacacattaatt 11071697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 123 - 384
Target Start/End: Original strand, 38449601 - 38449862
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| |||| ||||||||| ||||  ||||||||| ||||||||||||| |||||       |||||||||||||||||||||||  | |      
T  38449601 catttgactttatttttattcctaaatgtaaaccccttttcaacttactagatgcatatattatttttttcctaaacatacccctaattaatattattga 38449700  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    | |||||||||||||||| | ||| ||||||||||||||||||||||  | |||||  ||||||||| |||||||||||||||||||||||||   | ||    
T  38449701 cctgtcttgaaatatgaataatcaaatttaatacacatacaaacaaatgataatttgataatattaatacacaaaacagacacattaattacaaaaataa 38449800  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacat 384  Q
    |       ||||||||||||||| | || ||| || |||||  |||||||||||||||||||    
T  38449801 cttttattaagaaatgtgaaaaaagaaaaggagggttacatatagggacggagggagtacat 38449862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 126 - 311
Target Start/End: Original strand, 38981961 - 38982146
Alignment:
Q  126 ttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc-- 223  Q
    ||||||||| |||||| ||||||| ||||  | |||| |||||| |||||||||||||||        ||| ||||||||||||||||||| |||| |      
T  38981961 ttgattttatttttgtccctaaatctaaacccatttttaaattattagatgcatttattatttttt--ctatacatacccctaattaatactactaacaa 38982058  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||    
T  38982059 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaaaataatttggtaatattaacacacaaaacagatacattaat 38982146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 43650179 - 43650053
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    ||||||||| ||||||||||| |||| ||||| ||||||| | ||| |||| ||||||||||||||||||||||||||||||| |||||||||||| |||    
T  43650179 aaacatacctctaattaatacaactaacttgttttgaaatttaaaaggtcaaatttaatacacatacaaacaaagaacaatttagtaatattaacataca 43650080  T
Q  296 aaacagacacattaattacaccgacaa 322  Q
    ||||||||||||||||||||| |||||    
T  43650079 aaacagacacattaattacactgacaa 43650053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 158 - 350
Target Start/End: Original strand, 28264875 - 28265065
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||    || |||||||||||||||||| ||||| ||||||||     
T  28264875 cttttcaaattactagatgcatttattaatatttttcctaaacatacccctaattaatat---taacttgtcttgaaatatgaatagtcaaatttaatat 28264971  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||||||||||  ||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||       ||||||||||||||| ||||    
T  28264972 acatacaaacaaatgacaatttggtaatattaacgcacaaaacaaacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 28265065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 122 - 323
Target Start/End: Original strand, 2048716 - 2048915
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| ||||||| |||||| |||||   ||||||||||| |||||||||||||||       | |||||||||||||||| ||||| ||||    
T  2048716 ccatttgattttatttttgtttctaaatgtaaatcttttttcaaattattagatgcatttattatttttttcttaaacatacccctaataaatactacta 2048815  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
     ||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||| || || |||||||| |||| ||| |||||| ||||||| |||    
T  2048816 acttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaag-ataatttggt-atgttaacacataaaatagagacattatttacaccaaca 2048913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 378
Target Start/End: Complemental strand, 3326871 - 3326687
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||| ||||  || |||||||||||||||||| | |||| ||||||||| |||||||| |||||||  ||||||||| | |    
T  3326871 ctaaacatacccctaattaatactactacgttatcttgaaatatgaaaagttaaattttatacacatataaacaaaggacaatttaataatattaatata 3326772  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggaggga 378  Q
    |||||||||||||||||||||||||||||        || |||| |||||||||||||   || |||||||||| ||||||||||    
T  3326771 caaaacagacacattaattacaccgacaattttttttaaaaaatatgaaaaaggcaataagtgcctacattaagagacggaggga 3326687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 312
Target Start/End: Complemental strand, 43710115 - 43709948
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||||||| |||| |||||| ||||||||||||| |       ||| ||||||||| |||||||||| |||| ||| ||||||||||| ||||||    
T  43710115 taaatataaattcttttttaaattattagatgcatttatgattttattccttaacatacccataattaatactactaacttatcttgaaatataaaaagt 43710016  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     |  ||||||||||||| |||||||| ||||||  ||||||||||||||||||| |||| ||||||||    
T  43710015 aaattttaatacacatataaacaaaggacaattaagtaatattaacacacaaaatagacgcattaatt 43709948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 304
Target Start/End: Complemental strand, 2131903 - 2131794
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||| |||||||||||  | ||||| |||||||||||||||    
T  2131903 taaacatacccctaattaatacaactaacttgtctttaaatatgaaaagtcaaatttaatacagatacaaacaaaagataatttggtaatattaacacac 2131804  T
Q  295 aaaacagaca 304  Q
    |||| |||||    
T  2131803 aaaatagaca 2131794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 111 - 313
Target Start/End: Complemental strand, 23464911 - 23464711
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaat 210  Q
    |||||||| || ||||| | |||| |||||| ||||||| |||||  ||||| |||||||||||||||||||||        | || | |||||||||||    
T  23464911 tatgtaaacactcatttaactttatttttgtccctaaatgtaaatctctttt-aaattactagatgcatttatttattttttc-tacaaatacccctaat 23464814  T
Q  211 taataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||| |||| ||||| |||||||||||||||||| |||||||||| ||||||| |||| |||||||  ||||||| || ||||||| |||||||||||    
T  23464813 taatactactaacttgttttgaaatatgaaaagtcaaatttaatacatatacaaataaaggacaatttgataatatttacgcacaaaatagacacattaa 23464714  T
Q  311 tta 313  Q
    |||    
T  23464713 tta 23464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 375302 - 375425
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||  | |||| ||||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||  ||||| ||||||    
T  375302 cctaaacatattcgtaatcaatactactaacttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttgataatactaacac 375401  T
Q  293 acaaaacagacacattaattacac 316  Q
    |||||| |||||||||||||||||    
T  375402 acaaaatagacacattaattacac 375425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 534684 - 534549
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| | ||||| ||||   |||||||||||||||||||||||||||        |||||| ||||||||||||||||| | ||    
T  534684 ccatttgattttatttttgtccttaaatgtaaacctcttttcaaattactagatgcatttattttttttttcctaaatatacccctaattaatactatta 534585  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||||||||||||||||||| ||||||||||    
T  534584 tcttgtcttgaaatatgaaaagtcaaatttaataca 534549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 25731143 - 25731269
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||| ||| |||||||| |||||||||||||  | |||||  ||||||||||||    
T  25731143 cctaaacatacccctaattaatactactaacttgtcttaaaatatgaaaaatcaaatttaatatacatacaaacaaaagataatttgataatattaacac 25731242  T
Q  293 acaaaacagacacattaattacaccga 319  Q
    ||||| || ||| |||||||| |||||    
T  25731243 acaaaccaaacatattaattataccga 25731269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 120 - 310
Target Start/End: Complemental strand, 3645540 - 3645354
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||  |||| | ||||||| ||| | ||||||||||||| ||||| ||||| ||        | ||||||||||| |||||||||| ||    
T  3645540 acccatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacatttttt---ttcttcataaacataccc-taattaatactac 3645445  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    || |||| ||||||||||||||||||| |||||||| ||| |||||| ||| ||||||| |||||||||| |||||||| |||||||||||    
T  3645444 taacttgccttgaaatatgaaaagtcaaatttaatatacacacaaacgaaggacaatttagtaatattaatacacaaaatagacacattaa 3645354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 312
Target Start/End: Original strand, 45150595 - 45150812
Alignment:
Q  89 ctaaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannn 188  Q
    |||||||||| ||||| |||| ||| |||  || |||||||||||| |||||| ||||||| |||| ||||||||||||| |||||| |||||||||       
T  45150595 ctaaatactccctccgtccctatatttaatcactcatttgattttatttttgtccctaaatgtaaactccttttcaaattgctagatacatttattatta 45150694  T
Q  189 nnnncct-aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatt 287  Q
         || |||||||||  |||||||||| ||   |||    | ||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  45150695 tttttcttaaacatacctttaattaatactac---ctt----taaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaattgagtaatatt 45150787  T
Q  288 aacacacaaaacagacacattaatt 312  Q
    |||||||||||   |||||||||||    
T  45150788 aacacacaaaatgaacacattaatt 45150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 26512188 - 26512099
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||| | ||||||||||||    
T  26512188 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaataaacacattaatta 26512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 139 - 312
Target Start/End: Complemental strand, 32677678 - 32677504
Alignment:
Q  139 tgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc-ctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| |||||||||||||  ||||||||||||||||| |||||||||         ||||||||||||||||||||||| ||||  ||||||||||||||    
T  32677678 tgtttctaaatataaattttttttcaaattactagatacatttattatgtttttttctaaacatacccctaattaatactactaatttgtcttgaaatat 32677579  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||| ||| ||||| ||||  ||||||||||  |||||||   ||||||||| || |||| |||||||||||||    
T  32677578 gaaaaatcaaatttagtacatgtacaaacaaatgacaatttgaaaatattaacccataaaatagacacattaatt 32677504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 44274420 - 44274538
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccactatcttgtcttgaaata 236  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||||       ||| |||||||||||||||||||||||||| |||||||||||||     
T  44274420 ttgtccctaaatgtaaatcccttttcaaattactaaatgcatttattatttttttccttaaacatacccctaattaataccactaacttgtcttgaaatt 44274519  T
Q  237 tgaaaagtcagatttaata 255  Q
    |||||||||| ||||||||    
T  44274520 tgaaaagtcaaatttaata 44274538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 27749688 - 27749580
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||||||||       |||||||||||||||||||||||| ||    
T  27749688 acccatttgattttatttttgtccctaaatgtaaactccttttcaaattacaagatgcatttattacttttttcctaaacatacccctaattaatactac 27749589  T
Q  220 tatcttgtc 228  Q
    || ||||||    
T  27749588 taacttgtc 27749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 218 - 381
Target Start/End: Complemental strand, 44421572 - 44421409
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    |||| |||||||| |||| | ||||  || ||||||||||||||||||||||  ||||||| |||||||||||| |||||||||| |||||||||||||     
T  44421572 actaacttgtcttaaaatttaaaaaaacaaatttaatacacatacaaacaaatgacaatttagtaatattaacaaacaaaacagatacattaattacact 44421473  T
Q  318 gacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||        ||||||||||||||| | || ||  |  |||||||||||||||||||||||    
T  44421472 gacaatttttcttaagaaatgtgaaaaaagtaaagggagtttacattaagggacggagggagta 44421409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 4033674 - 4033606
Alignment:
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  4033674 atttaatacacatacaaacaaagaacaatttagtaatattaacacagaaaacagaaacattaattacac 4033606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 6275524 - 6275643
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaa-agtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    |||||||||||| ||||||||||  | || ||||||||||||||||||| ||| | |||||||||| |||||||||||  |||||||| |||| ||||||    
T  6275524 cctaaacatacctctaattaatattattaacttgtcttgaaatatgaaatagttaaatttaatacatatacaaacaaaagacaatttcataat-ttaaca 6275622  T
Q  292 cacaaaacagacacattaatt 312  Q
    ||||||| |||||||||||||    
T  6275623 cacaaaatagacacattaatt 6275643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 14527750 - 14527650
Alignment:
Q  214 taccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    |||||||| ||||| |||||||||||||| ||| |||||||| |||||||||||||  | ||||  ||||||||||||||||||| ||||||||||||||    
T  14527750 taccactaacttgttttgaaatatgaaaaatcaaatttaatatacatacaaacaaatgataattcggtaatattaacacacaaaatagacacattaatta 14527651  T
Q  314 c 314  Q
    |    
T  14527650 c 14527650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 21013001 - 21012882
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||| ||||||| |||| |||| ||||| ||||||||| |||||||| ||||||||  ||||||||||||| | |||||  ||||||||||||    
T  21013001 cctaaatatactcctaatttatactactaacttgttttgaaatataaaaagtcaaatttaatatgcatacaaacaaaggataatttgataatattaacac 21012902  T
Q  293 acaaaacagacacattaatt 312  Q
    |||||| | |||||||||||    
T  21012901 acaaaataaacacattaatt 21012882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 43119267 - 43119424
Alignment:
Q  137 tttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn---cctaaacatacccctaattaataccactatcttgtcttgaa 233  Q
    ||||| |||||||||||||  ||||||||||||||||||| ||||||||          |||||||| | || |||||||||| | ||| |  |||||||    
T  43119267 tttgtccctaaatataaatctcttttcaaattactagatgtatttattattttttatttcctaaacacatccttaattaatactaatatataatcttgaa 43119366  T
Q  234 atatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||| ||||||||||||    
T  43119367 atatgaaaaatcaaatttaatacacatacaaacaaatgacaatttagtaatattaaca 43119424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 312
Target Start/End: Complemental strand, 44101563 - 44101401
Alignment:
Q  148 atataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcag 247  Q
    |||||||  |||||| ||||||||||||||||||||||       | ||||||||  |||||||||||| |||  |||||||  |||||| |||| |||     
T  44101563 atataaaccccttttaaaattactagatgcatttattatttta--cttaaacatatacctaattaatactacttacttgtctcaaaatataaaaaatcaa 44101466  T
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||| ||| |||||| ||||| |||||||||| |||||||| | |||||||||||    
T  44101465 atttaatacacatataaataaagaataatttagtaatattaaaacacaaaataaacacattaatt 44101401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 8393331 - 8393234
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| ||| |||||||| |||||||  || |||||| |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||| ||||    
T  8393331 actaacttatcttgaaacatgaaaaaacaaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 8393234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 323
Target Start/End: Original strand, 35241666 - 35241795
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||| |  |||||||||  |||  ||| ||||||| ||| |||||||| ||||| ||| ||||||||||||  | |||||  ||||||||||| |    
T  35241666 ctaaacatatctttaattaatattactgacttatcttgaagtataaaaagtcaaatttattacgcatacaaacaaatgataatttgataatattaacaaa 35241765  T
Q  294 caaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||||| ||||||    
T  35241766 caaaacagacacattaattacacagacaac 35241795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 36846878 - 36846781
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| ||| |||||||| |||||||  || |||||| |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||| ||||    
T  36846878 actaacttatcttgaaacatgaaaaaacaaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 36846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 44462563 - 44462660
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| ||| |||||||| |||||||  || |||||| |||||||||||||||||| |||||  |||||||||||||||||||| ||||||||| ||||    
T  44462563 actaacttatcttgaaacatgaaaaaacaaatttaaaacacatacaaacaaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 44462660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 16808791 - 16808899
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    |||||||| |||| |||| |||||||||||||||||||| | |  ||||||| |||||||||||||  ||||||| |||||||||| ||| |||| | ||    
T  16808791 ccctaatttatactactaacttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatac 16808890  T
Q  304 acattaatt 312  Q
    |||||||||    
T  16808891 acattaatt 16808899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 16848072 - 16848180
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    |||||||| |||| |||| |||||||||||||||||||| | |  ||||||| |||||||||||||  ||||||| |||||||||| ||| |||| | ||    
T  16848072 ccctaatttatactactaacttgtcttgaaatatgaaaaattaattttaatatacatacaaacaaatgacaatttagtaatattaatacataaaatatac 16848171  T
Q  304 acattaatt 312  Q
    |||||||||    
T  16848172 acattaatt 16848180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 42250849 - 42250956
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| | || ||||||||||||||| |||||||| |||||||||||||| ||| |||  ||||||   ||| ||||| |||||||| ||||||    
T  42250849 ctaattaatactattaacttgtcttgaaatataaaaagtcaaatttaatacacatataaataaatgacaatt---taacattaaaacacaaaatagacac 42250945  T
Q  306 attaattacac 316  Q
    |||||||||||    
T  42250946 attaattacac 42250956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 4398545 - 4398604
Alignment:
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  4398545 acatacaaacaaatgacaatttcgtaatattaacacacaaaatagacacattaattacac 4398604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 29971387 - 29971293
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    |||||||||||| ||||| || | |||||||| ||||||||||||| || ||||| ||||| |||||| ||||||||||| |||||||||||||||    
T  29971387 ttgtcttgaaatttgaaatgttaaatttaatagacatacaaacaaaaaaaaatttagtaattttaacatacaaaacagac-cattaattacaccga 29971293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 35453726 - 35453813
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| ||||||||||||| | ||||||||||  || |||||||||||||||| |||||||||||| | |||| |||||||||||||||||    
T  35453726 tcttcaaatatgaaaagttaaatttaataca--taaaaacaaagaacaatttagtaatattaacatataaaatagacacattaattacac 35453813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 312
Target Start/End: Original strand, 8383934 - 8384048
Alignment:
Q  197 aacatacccctaattaataccactatctt-gtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    ||||||||| |||||||||| ||||  || ||||||||||||||||| ||| ||||||||||  || | |||||  ||||||| ||||||||||||||||    
T  8383934 aacatacccttaattaatactactagtttagtcttgaaatatgaaaaatcatatttaataca--taaagacaaatgacaatttggtaatattaacacaca 8384031  T
Q  296 aaacagacacattaatt 312  Q
    ||| | |||||||||||    
T  8384032 aaataaacacattaatt 8384048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 28190734 - 28190626
Alignment:
Q  205 cctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagaca 304  Q
    |||||||| ||| ||||  ||||||||||||||||||| | | | |||||||| |||||||||||  ||||||| |||||||||||||| |||| | |||    
T  28190734 cctaattattactactaaattgtcttgaaatatgaaaaattaaacttaatacatatacaaacaaatgacaatttggtaatattaacacaaaaaataaaca 28190635  T
Q  305 cattaatta 313  Q
     ||||||||    
T  28190634 tattaatta 28190626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 2917071 - 2917174
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| |||| |||||||| |||||| |||||| | ||||||||||||||||||||||  |||||||  ||||    ||| |||||| ||||||    
T  2917071 ctaattaatactactaacttgtcttaaaatataaaaagttaaatttaatacacatacaaacaaaagacaatttattaat----acatacaaaatagacac 2917166  T
Q  306 attaatta 313  Q
    ||||||||    
T  2917167 attaatta 2917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 2654446 - 2654328
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    ||||||| ||||||||||||| | || ||| |||| ||||||||||| ||| ||| |||||||||| |||||||  ||||||| |||| |||  ||||||    
T  2654446 aaacataaccctaattaatactattaacttatcttaaaatatgaaaaatcaaattaaatacacatataaacaaaagacaatttagtaacatt--cacaca 2654349  T
Q  296 aaacagacacattaattacac 316  Q
    ||||  ||| |||||||||||    
T  2654348 aaacgaacatattaattacac 2654328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 12498250 - 12498314
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaa 283  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||    
T  12498250 actaacttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaa-aacaatttggtaa 12498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 15578063 - 15578160
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| ||| |||||||| |||||||   | |||||| ||||||||||| |||||| |||||  |||||||||||||||||||| ||||||||| ||||    
T  15578063 actaacttatcttgaaacatgaaaaaataaatttaaaacacatacaaataaagaaaaatttgataatattaacacacaaaacaaacacattaactaca 15578160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 44274685 - 44274746
Alignment:
Q  254 tacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||||||||||||  ||||||| | |||||||||||| |||||||||||||||||||||    
T  44274685 tacacatacaaacaaatgacaatttggcaatattaacacataaaacagacacattaattaca 44274746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 35179001 - 35178941
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaa 253  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| ||||||    
T  35179001 cctaaacatacccctaattaataccgctaacttatcttgaaatatgaaaaatcaaatttaa 35178941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 289
Target Start/End: Complemental strand, 6408776 - 6408681
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaa 289  Q
    |||||||||||  |||||||||| | || ||| ||||||||||||||||||   |||||||||||||||||| ||| || |||||  |||||||||    
T  6408776 ctaaacatacctttaattaatactattaacttttcttgaaatatgaaaagttgaatttaatacacatacaaataaataataatttaataatattaa 6408681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 20427237 - 20427166
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaa 264  Q
    ||||||||||||| ||||||||||  | | |||||  ||||||||||||||||| |||||||||||||||||    
T  20427237 cctaaacatacccttaattaatactgcaaacttgttctgaaatatgaaaagtcaaatttaatacacatacaa 20427166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 36174751 - 36174834
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    ||||||||||||||||||||| ||||| ||| | |||||||   |||||||| |||||||||||||||||| |||  |||||||    
T  36174751 taaacatacccctaattaatatcactaacttatattgaaatgataaaagtcaaatttaatacacatacaaataaaagacaattt 36174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 44284847 - 44284910
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||||||||||| |||||| |||||||||||| || |||||||||| ||||||| ||||||||    
T  44284847 ccatttgattttatttttgtacctaaatataaactctttttcaaattcctagatgtatttatta 44284910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 315
Target Start/End: Original strand, 7257895 - 7258017
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||||| ||||||||    ||| ||| |||| |||||| |||||||| |||| |||||| ||||||| ||  |||||||  ||||||||| ||    
T  7257895 cctaaatatacccttaattaattttgctaacttatcttaaaatataaaaagtcaaattttatacacgtacaaacgaatgacaatttaataatattaatac 7257994  T
Q  293 acaaaacagacacattaattaca 315  Q
    || ||||| ||||||||||||||    
T  7257995 actaaacaaacacattaattaca 7258017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 41327688 - 41327825
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| | ||||| |||||  |||||||||||||||||||||||| ||        | ||| ||||||| ||||| |||| ||    
T  41327688 acccatttgactttatttttgtccataaatgtaaatctcttttcaaattactagatgcatttgtt-----tcccataagcatacccgtaattcatactac 41327782  T
Q  220 ta--tcttgtcttgaaatatgaaaagtcagatttaatacacat 260  Q
    ||  | ||||||||||||||||||||||| ||||||| |||||    
T  41327783 taacttttgtcttgaaatatgaaaagtcaaatttaatgcacat 41327825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 4398471 - 4398532
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||||| |||| |||||||||||||| ||||  | ||||||||||||||||||||||||||    
T  4398471 catttgactttatttttgttcctaaatgtaaaccctttttcaaattactagatgcatttatt 4398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 13477001 - 13477109
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||||||||||| ||||  || | || ||||||||||| ||| ||||||||  |||||||| |||| ||||| | |||||||||||||| |||| | ||    
T  13477001 ccctaattaatactactaatttattttaaaatatgaaaaatcaaatttaatatgcatacaaataaaggacaatctagtaatattaacacataaaataaac 13477100  T
Q  304 acattaatt 312  Q
    | |||||||    
T  13477101 atattaatt 13477109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 38107687 - 38107603
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    ||||||||||||| ||||||||||||||       |||||||||||||||||||||||| | ||| ||||  ||||||||||||||    
T  38107687 cttttcaaattacaagatgcatttattattattttcctaaacatacccctaattaatacta-tattttgtagtgaaatatgaaaag 38107603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 6597972 - 6597882
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||| || ||| |||| ||| |||||||||||||||||| |||| | | ||| ||||| ||||||||||||| ||||| ||||||||||    
T  6597972 ttgtctttaactataaaaattcaaatttaatacacatacaaa-aaaggatattttggtaatgttaacacacaaaatagacatattaattaca 6597882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 12417617 - 12417680
Alignment:
Q  235 tatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||| ||| |||||||||||||||||| ||| ||||||||  ||||||||||||| ||||    
T  12417617 tatgaaaaatcaaatttaatacacatacaaataaaaaacaatttgttaatattaacacaaaaaa 12417680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 12429677 - 12429740
Alignment:
Q  235 tatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||| ||| |||||||||||||||||| ||| ||||||||  ||||||||||||| ||||    
T  12429677 tatgaaaaatcaaatttaatacacatacaaataaaaaacaatttgttaatattaacacaaaaaa 12429740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 27749580 - 27749508
Alignment:
Q  273 caatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    |||||| |||||||||| |||||||||||||| ||||||||||| ||||||       |||||||||||||||    
T  27749580 caatttagtaatattaatacacaaaacagacatattaattacactgacaacttttcttaagaaatgtgaaaaa 27749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 20360678 - 20360609
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaa 264  Q
    ||||||||||| ||||||||||  | | ||||| ||||||||| |||||||| |||||||| ||||||||    
T  20360678 taaacatacccttaattaatactgcaaacttgttttgaaatataaaaagtcaaatttaataaacatacaa 20360609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 36175044 - 36175156
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    |||||| || |||||||||| | |||  || |||| |||||| |||||| | ||||||||   ||||||||||||||||| || || ||||| |||| ||    
T  36175044 aaacatgcctctaattaataacgctaatttatcttaaaatataaaaagttaaatttaatatgtatacaaacaaagaacaacttagtgatattcacacgca 36175143  T
Q  296 aaacagacacatt 308  Q
    ||| |||||||||    
T  36175144 aaatagacacatt 36175156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 11121346 - 11121259
Alignment:
Q  207 taattaataccactatctt-gtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    |||||||||| |||| ||| |||||||||||| |||||||| |||||||  ||||  |||||||| |||||||  ||||||| |||||||    
T  11121346 taattaatactactaactttgtcttgaaatataaaaagtcaaatttaat--acatttaaacaaaggacaatttgataatatttacacaca 11121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 23464707 - 23464665
Alignment:
Q  339 tgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||| |||||||||  |||||||||||||||||||||||    
T  23464707 tgaaaaagacaatggatgcatacattaagggacggagggagta 23464665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 43638820 - 43638893
Alignment:
Q  235 tatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatt 308  Q
    |||||||| ||| |||||||||||||| ||| |||  | ||||| ||||||||||||| ||||| | |||||||    
T  43638820 tatgaaaaatcaaatttaatacacatataaataaatgataattttgtaatattaacacgcaaaataaacacatt 43638893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 12122002 - 12121907
Alignment:
Q  224 ttgtcttgaaatatgaaaa-gtcagatttaata--cacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||||||||| |||| || |||||  |||||||||  ||| ||||||||  ||||||| ||| | |||| ||||| |||||||||||    
T  12122002 ttgtcttgaaatatgaaaaagtcaaatataatatacacatacaagtaaaaaacaatttaataatattcacatataaaatagacatattaattacac 12121907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 30401517 - 30401581
Alignment:
Q  205 cctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||| ||| |||| |||  ||| ||||||||||| | | ||||||||||||||||||||||    
T  30401517 cctaattagtactactaacttaccttaaaatatgaaaaattaaatttaatacacatacaaacaaa 30401581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 8e-77; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 123 - 386
Target Start/End: Original strand, 57076 - 57339
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| ||||||| ||||  |||||||||||||||||||||||||||||       ||||||||||||| |||||||||| | |||    
T  57076 catttgattttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttattatttttttcctaaacatacccttaattaatactattat 57175  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  57176 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 57275  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacatct 386  Q
    |       |||||||||||||||  ||||   || ||| |||||||||||||||| ||| ||||    
T  57276 cttttcttaagaaatgtgaaaaaaacaataagtgcctatattaagggacggagggtgtatatct 57339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 106 - 381
Target Start/End: Original strand, 38202863 - 38203138
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| ||| |||| ||||||||||||||| ||||||  ||| |||||||  |||||||||||||||||||||||||||||       | |||| ||||||    
T  38202863 ccctatatctaaacacccatttgattttatttttgtctctacatataaaccccttttcaaattactagatgcatttattatttttttcttaaatataccc 38202962  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||     
T  38202963 ctaattaatactaccatcttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacaaacat 38203062  T
Q  306 attaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||       ||||||||||||||||  || || || ||||||||| ||||||||||||||    
T  38203063 attaattacaccgacaacttttattaagaaatgtgaaaaagataacgggtgcctacattaaaggacggagggagta 38203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 106 - 381
Target Start/End: Complemental strand, 7772746 - 7772472
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||||       |||||||||| ||    
T  7772746 ccctatatgtaaacacccatttgattttacttttgtccctaaatataaacatcttttcaaattactagatgtatttattatttttt-cctaaacatatcc 7772648  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    |||||||||| || |||||| |||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  7772647 ctaattaatatcaatatcttatcttgaaatatgaaaagtgaaatttaatacacatacaaataaaggacaatttcgtaatattaacacacaaaacagacac 7772548  T
Q  306 attaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||  ||||||       || |||||| |||||| |||| ||||||||| |||||||||| | ||||||    
T  7772547 attaattacaatgacaacttttcttaaaaaatgtaaaaaagacaatagatggctacgttaagggacgaatggagta 7772472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 124 - 366
Target Start/End: Complemental strand, 25198505 - 25198264
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| |||||| ||||||| |||| || |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||| |    
T  25198505 atttgactttatttttgtccctaaatgtaaactc-ttttcaaattactagatgcatttattattattttcctaaacatacccctaattaatactactaac 25198407  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    || |||||||||||||||||||| |||| |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  25198406 ttatcttgaaatatgaaaagtcaaattttatacacatacaaacaaaggacaatttggtaatattaacacacaaaacaaacacattaattacactgacaac 25198307  T
Q  324 nnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaa 366  Q
           |||||||||||||||||||||||||| |||||||||    
T  25198306 ttttcttaagaaatgtgaaaaaggcaatggatgcctacattaa 25198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 123 - 381
Target Start/End: Original strand, 38773236 - 38773495
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||| | ||||||| ||||   |||||||||||| |||||||||||||||       |||||||||||| ||||||||||| || ||    
T  38773236 catttgattttatttttatccctaaatttaaacctcttttcaaattattagatgcatttattatttttttcctaaacatacctctaattaatactaccat 38773335  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  38773336 cttgtcttgaaatatgaaaaatcaaatttcatacacatacaaacaaaagacaatttcgtaatgttaacacacaaaacagacacattaattgcactgacaa 38773435  T
Q  323 c-nnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |        |||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  38773436 cttttttttaagaaatgtgaaaaagacaatggttgcctacattaagggacggagggagta 38773495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 123 - 381
Target Start/End: Original strand, 38761244 - 38761504
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc--ctaaacatacccctaattaataccact 220  Q
    |||||||||||| |||||| |||| || ||||  |||||||||||||||||||||||||||||       |  ||||||||| ||||||||||||| |||    
T  38761244 catttgattttatttttgtccctatatgtaaaccccttttcaaattactagatgcatttattatttttttcttctaaacatatccctaattaatactact 38761343  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||    
T  38761344 atcttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaacagacacattaattacactgac 38761443  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       || |||| ||||||||  |||   || |||||||||||||| |||||||||    
T  38761444 aactttttttaataaatatgaaaaagataatatgtgcctacattaagggacagagggagta 38761504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 123 - 381
Target Start/End: Original strand, 24512054 - 24512313
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccacta 221  Q
    |||||||||||| |||||| ||||||| ||||| | ||||||||||  |||||||||||||||        || ||||||||||||||||||||| ||||    
T  24512054 catttgattttatttttgtccctaaatgtaaatcctttttcaaattcttagatgcatttattattatttttcttaaacatacccctaattaatactacta 24512153  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    | || |||||||||||||||||||| ||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  24512154 ttttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacagacacattaattacactgaca 24512253  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |        || |||||||||||||  |||||||| ||||||||||||||||||| ||||    
T  24512254 aattttcttaaaaaatgtgaaaaagataatggatgcctacattaagggacggaggaagta 24512313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 159 - 381
Target Start/End: Original strand, 40337115 - 40337337
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    |||||||||||||| ||||||||||||       ||||||||||||| |||||||||| | |||||||||||||||||||||||||||  || |||||||    
T  40337115 ttttcaaattactatatgcatttattatttttttcctaaacatacccttaattaatactattatcttgtcttgaaatatgaaaagtcaatttaaatacac 40337214  T
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggc 358  Q
    |||||||||||| ||||||| |||||||||||| |||||||| |||||||||||| || || |||       |||||||||||||||| ||||||||| |    
T  40337215 atacaaacaaaggacaattttgtaatattaacatacaaaacatacacattaattatactgataacttttcataagaaatgtgaaaaagacaatggatgcc 40337314  T
Q  359 tacattaagggacggagggagta 381  Q
    |||||||||||||||||||||||    
T  40337315 tacattaagggacggagggagta 40337337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 93 - 316
Target Start/End: Original strand, 1177013 - 1177237
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||| || ||||| |||||||||||||  |||||||||||  |||||| ||||||||||||||||||||||           
T  1177013 atactccctccgtccctatatgtaaacactcatttaattttacttttgtctctaaatataaacccctttttaaattactagatgcatttattattttttt 1177112  T
Q  193 -cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||||||| |||  |||||||||||||||||| |    
T  1177113 tcctaaacatacccctaattaatactactatcttgttttgaaatatgaaaaatcaaatttaatacacatacaaataaaagacaatttcgtaatattaata 1177212  T
Q  292 cacaaaacagacacattaattacac 316  Q
     ||||||||||||||||||||||||    
T  1177213 tacaaaacagacacattaattacac 1177237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 193 - 381
Target Start/End: Complemental strand, 25185178 - 25184990
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||||    
T  25185178 cctaaacatacccctaattaatactactatcttatcttgaaatatgaaaagacaaatttaatacacatacaaacaaatgacaatttcgtaatattaacac 25185079  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||| |||||| ||||||       ||||||||||||||||||||||| ||  |||||||||||||| | ||||||    
T  25185078 acaaaacagacacattagttacactgacaacttttcttaagaaatgtgaaaaaggcaatgggtgcatacattaagggacgaatggagta 25184990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 93 - 350
Target Start/End: Original strand, 26878586 - 26878843
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| |  |||| ||||||||||||| ||||||||           
T  26878586 atactccctccgtccctatatgtaacaacccatttgattttatttttgtccctaaatgtaaacttttttttaaattactagatgtatttattattttttt 26878685  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||| |||||||||||||| ||||||| |||||||||||||    
T  26878686 cctaaacatacccctaattaatactactaacttatcttgaaatatgtaaagtcaaatttaatatacatacaaacaaaggacaatttggtaatattaacac 26878785  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    |||||| ||||||||||||||||   |||||       ||||||||||||||||||||    
T  26878786 acaaaatagacacattaattacattaacaacttttcttaagaaatgtgaaaaaggcaa 26878843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 93 - 308
Target Start/End: Complemental strand, 40517988 - 40517773
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| ||| |||| | |||||||| |||| |||||| ||||||| |||| |||||||||||||| ||||| |||||||||           
T  40517988 atactccctccgtccctatatctaaacatccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagatccatttattattttttt 40517889  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| |||| ||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  40517888 cctaaacatacccctaattaatactactaacttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacac 40517789  T
Q  293 acaaaacagacacatt 308  Q
    ||||||||||||||||    
T  40517788 acaaaacagacacatt 40517773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 12763090 - 12762871
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    ||||||| ||||| || | ||| |||| | ||||||||||||| |||||| ||||||| ||||  ||||| |||||||||||||||||||||||          
T  12763090 aatactccctccgtccttatatctaaacatccatttgattttatttttgtccctaaatctaaac-cctttccaaattactagatgcatttattatttttt 12762992  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||| ||||||||||||||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  12762991 tcctaaagatacccctaattaatattactaacttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaaca 12762892  T
Q  292 cacaaaacagacacattaatt 312  Q
    ||||||| |||||||||||||    
T  12762891 cacaaaatagacacattaatt 12762871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 92 - 381
Target Start/End: Complemental strand, 37956363 - 37956082
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    |||||||||| || |||| ||| ||| || | ||||||||||| |||||| ||||||| ||||  |||||| ||||||||| |||||||| ||           
T  37956363 aatactcgcttcgtccctatatctaagtatctatttgattttatttttgtccctaaatgtaaacccctttttaaattactaaatgcatttttt------t 37956270  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     | ||||||||||| |||||||||  | ||||||||||||||||||||||||||| || ||||| |||||||||||||| |||| |||||||||||||||    
T  37956269 tcgtaaacataccc-taattaatattattatcttgtcttgaaatatgaaaagtcaaatctaatatacatacaaacaaaggacaaattcgtaatattaaca 37956171  T
Q  292 cacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||||||| ||||||       |||||||||||||||| |||||| |  ||||||||||||||||||||||||    
T  37956170 cacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagacaatgg-tacctacattaagggacggagggagta 37956082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 122 - 316
Target Start/End: Original strand, 31252542 - 31252736
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||||||||||| ||||   ||||||||||||||||||||||||||||       | ||||||||||||||||| |||| ||||    
T  31252542 ccatttgattttatttttgttcctaaatgtaaacctcttttcaaattactagatgcatttattattattttcttaaacatacccctaatttatactacta 31252641  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||     ||||||||||||||||||||||||||||||||||||||||||    
T  31252642 tcttgtcttaaaatatgaaaagtcaaatttaatacacatgcaaacaaatgtttatttcgtaatattaacacacaaaacagacacattaattacac 31252736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 120 - 381
Target Start/End: Original strand, 38770072 - 38770333
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| ||||||| | | |||||||  |||||||||||||||| ||  ||||||||       |||||| ||| ||||||||||||| |     
T  38770072 acccatttgattttatttttgtttccagatataaaccccttttcaaattactaaatatatttattatttttttcctaaatatatccctaattaatactat 38770171  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
      ||||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||| ||    
T  38770172 cctcttgtcttgaaatatgaaaagtcaaaattaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaataaacacattaattacactga 38770271  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||       ||||||| |||||||| |||||  || ||||||||||| ||||||||||||    
T  38770272 caacttatcttaagaaatatgaaaaagacaatgcgtgcctacattaaggaacggagggagta 38770333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 90 - 381
Target Start/End: Original strand, 43980438 - 43980727
Alignment:
Q  90 taaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnn 189  Q
    ||||||||| ||||| |||| |||||||  ||||||||||||||| |||||| | ||||| |||| ||||||||||||||||||||||||||||||        
T  43980438 taaatactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttattattat 43980537  T
Q  190 nnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaa 289  Q
       |||||||||||||||||||||| | ||||  || ||||||||||  |||||||| ||||||||||||||||||||||  | ||||| ||||||||||    
T  43980538 tttcctaaacatacccctaattaatcctactaatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaatgataatttagtaatattaa 43980637  T
Q  290 cacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||| |||| ||||||||||| |||||  |||||       ||||||||||||||| | || ||  || |||||  ||||||||||||||||    
T  43980638 cacataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagaaaagg--gggtacatatagggacggagggagta 43980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 122 - 321
Target Start/End: Original strand, 2562615 - 2562816
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncc-taaacatacccctaattaataccact 220  Q
    ||||||||||||| |||| || |||||| |||||||||||| |||||| |||||||||||||||        | |||| ||| ||||||||||||| |||    
T  2562615 ccatttgattttatttttttttctaaatgtaaattcctttttaaattattagatgcatttattattttttttcataaatatatccctaattaatactact 2562714  T
Q  221 atcttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||    
T  2562715 atcttgtcttagtaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacacattaattacactga 2562814  T
Q  320 ca 321  Q
    ||    
T  2562815 ca 2562816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 120 - 381
Target Start/End: Original strand, 10396115 - 10396374
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||| |||||||||  |||||| ||| ||||||||  ||||||||||||||||||||||||||||        |||||||||| ||||||||||||  |     
T  10396115 acccgtttgattttgtttttgtcccttaatataaaccccttttcaaattactagatgcatttatttattttttcctaaacatatccctaattaatattat 10396214  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||  | ||||||||||||  ||    
T  10396215 tatcttgtcttgaaatacgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaac--aaacattaattacattga 10396312  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||       || |||||||||||| | ||||| ||  |||| ||||||||||||||||||    
T  10396313 caacttttcttaataaatgtgaaaaatgaaatgggtgcatacaataagggacggagggagta 10396374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 122 - 350
Target Start/End: Original strand, 24962252 - 24962480
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| | ||||| |||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||| | ||||    
T  24962252 ccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttattattattttcctaaacatacccctaattaatcctacta 24962351  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
      |||||||||||||  |||||| | ||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||| |||||  |||    
T  24962352 atttgtcttgaaatacaaaaagttaaatttaatacacatacaaacaaaggacaatttagtaatattaacacataaaatagacacattaactacactaaca 24962451  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    ||       ||||||||||||||| ||||    
T  24962452 acttttcttaagaaatgtgaaaaaagcaa 24962480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 120 - 312
Target Start/End: Original strand, 31746291 - 31746482
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| ||||||| ||||  ||||||||||||||||||| |||||||||       |||||||||||||||||||||||  ||    
T  31746291 acccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatacatttattatttttt-cctaaacatacccctaattaataatac 31746389  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || ||||  |||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  31746390 taacttgctttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaatt 31746482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 41087191 - 41086936
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| |||| ||||||||| ||||   | ||||||||||||| ||||||||||||       |||||| |||||| |||||||||| ||||     
T  41087191 catttgactttatttttattcctaaatgtaaacatcctttcaaattactatatgcatttattatttttttcctaaa-atacccttaattaatactactaa 41087093  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  41087092 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaaggaaaatttgataatattaacacacaaatcagacacattaattacactgacaa 41086993  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
            |||||||||| |||||||||||| | |||||||||||||||| | ||||||    
T  41086992 tatttcttaagaaatgtg-aaaaggcaatgggt-gctacattaagggacgtaaggagta 41086936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 5191438 - 5191626
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||| |||||| |||||||||||||| ||||  |||||||||||||||||||||||||| ||       | |||||||||||||||||| |||  |||      
T  5191438 attttattttatttttgttcctaaatgtaaaccccttttcaaattactagatgcatttaatatttttttcttaaacatacccctaattagtactgctaaa 5191537  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  5191538 ttgtcttgaaatatgaaaaatcaaatttaatacacatataaacaatggacaatttggtaatattaacacacaaaacagacacattaatt 5191626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 145 - 312
Target Start/End: Complemental strand, 36437698 - 36437530
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    |||||||||| |  |||||||||||||||||||||||||||        ||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  36437698 taaatataaactaattttcaaattactagatgcatttattatttttttgcctaaacatacccctaactaatactactaacttgtcttgaaatatgaaaag 36437599  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||    
T  36437598 tcaaatttaatacacatacaaacaaaggacaatttggtaatgttaacacacaaaatagacacattaatt 36437530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 94 - 381
Target Start/End: Complemental strand, 40791035 - 40790749
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||||||| | |||| | | |||| ||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||| | ||||||||       |    
T  40791035 tactcgctctgtccctatgtctaaacacccatttgattttatttttgtccctaaatgtaatttccttttcaaattactagaggtatttattatttttttc 40790936  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
     ||||||| |||||| ||||||| ||||  ||||||||||||||||| ||||| ||||| |||| |||||||||||  ||||||| |||||||||| |||    
T  40790935 ttaaacatgcccctagttaatactactaagttgtcttgaaatatgaatagtcaaatttattacatatacaaacaaatgacaatttggtaatattaataca 40790836  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | |||||||| |||||||||||| ||||||       |||||||||||||||   || ||  |  |||||||||||||||||||||||    
T  40790835 c-aaacagacgcattaattacactgacaacttttcttaagaaatgtgaaaaaaataaagggggtttacattaagggacggagggagta 40790749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 146 - 312
Target Start/End: Complemental strand, 45203953 - 45203787
Alignment:
Q  146 aaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtc 245  Q
    |||||||||  |||||  ||||||||||||||||||||||       |||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  45203953 aaatataaacccctttataaattactagatgcatttattattattttcctaaacatacccctaattaatactactaacttgtcttgaaatatgaaaagtc 45203854  T
Q  246 agatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    | ||||||||| ||||||||||||| |||| || |||||||||||| |||||| |||||||||||||    
T  45203853 aaatttaatacgcatacaaacaaaggacaagttggtaatattaacatacaaaatagacacattaatt 45203787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 124 - 381
Target Start/End: Complemental strand, 37141943 - 37141686
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactat 222  Q
    ||||||||||| |||||| ||||| | ||||  | |||||| ||||||||||||||||||||        ||||||||||  | |||||| |||  ||||    
T  37141943 atttgattttatttttgtccctaattgtaaaccctttttcacattactagatgcatttattattttttttcctaaacatattcttaatta-tacttctat 37141845  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  37141844 cttgacttgaaatacgaaaagtcaaatttaatacacatacaaacaaatgacaatttcgtaatattaacacacaaaacagatacattaattacactgacaa 37141745  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       || |||||||||||| ||||| | ||  ||||||||| |||||||||||||    
T  37141744 ctttttttaaaaaatgtgaaaaatgcaataggtgcttacattaagagacggagggagta 37141686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 121 - 381
Target Start/End: Original strand, 39543546 - 39543809
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt-annnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||| |||| |||||| ||||||| ||||  | |||||||||||||||||||||||||| |       ||||||||| | |||| ||||| | ||    
T  39543546 cccatttgactttatttttgtccctaaatgtaaaccctttttcaaattactagatgcatttatttatttttttcctaaacat-ctcctacttaatgctac 39543644  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcg---taatattaacacacaaaacagacacattaattacac 316  Q
    || |||||||||| ||||||||||||| ||||||||||||||||||||||  ||||||| |   |||||||||| |||||||||||||||||||||||||    
T  39543645 taacttgtcttgagatatgaaaagtcaaatttaatacacatacaaacaaaagacaatttggtaataatattaacgcacaaaacagacacattaattacac 39543744  T
Q  317 cgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
     ||||||       ||||||| ||||||||||||| | || ||||||||| ||||||| ||||||    
T  39543745 ggacaacatttcttaagaaatatgaaaaaggcaataggtgcctacattaaaggacggatggagta 39543809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 120 - 323
Target Start/End: Complemental strand, 885681 - 885480
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| ||||| |||||||| ||||  |||||||||||||||||||| ||||||||       | |||| |||||  |||||||||||||    
T  885681 acccatttgattttatttttggtcctaaatttaaaccccttttcaaattactagatgaatttattattttttccataaatatacct-taattaataccac 885583  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    ||  |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||| ||||||||| | ||||||||| ||    
T  885582 taatttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttgataatattaacacac-aaacagacataataattacactga 885484  T
Q  320 caac 323  Q
    ||||    
T  885483 caac 885480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 316
Target Start/End: Original strand, 14577560 - 14577733
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnnc--ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    |||||||||| ||||||| ||||||||||||||||||||||          || |||||| ||||||||||||| |||| ||||||||||||||||||||    
T  14577560 taaatataaactcctttttaaattactagatgcatttattaatatttttttcttaacatatccctaattaatactactaacttgtcttgaaatatgaaaa 14577659  T
Q  243 gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
     ||| ||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||||||    
T  14577660 atcaaatttaatacacatacaaacaaagtacaatttggtaatattaacaaacaaaatagacacattaattacac 14577733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 122 - 310
Target Start/End: Original strand, 43191368 - 43191552
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| ||||||  |||||| |||| |||||||||||||||||||||||||| ||        |||||||||||||||||||||| | ||||    
T  43191368 ccatttgattttatttttgtctctaaatgtaaactccttttcaaattactagatgcatttttt----ttctcctaaacatacccctaattaatcctacta 43191463  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
     ||| |||||||||||||||| | | ||||||||||||||||||||||  ||||||| |||||||||||||| |||| |||||||||||    
T  43191464 acttatcttgaaatatgaaaatttaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaa 43191552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 210 - 381
Target Start/End: Original strand, 16002698 - 16002869
Alignment:
Q  210 ttaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    ||||||| | |||||||| ||||||||| |||||||| |||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||||||||    
T  16002698 ttaatactattatcttgttttgaaatataaaaagtcaaatttaatacaaatacaaacaaaggataatttcttaatattaacacacaaaactgacacatta 16002797  T
Q  310 attacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||| ||||||       || |||||||||||||| ||||| || ||||||||||||||||| ||||||    
T  16002798 attacacagacaacttttcttaaaaaatgtgaaaaaggaaatgggtgtctacattaagggacggatggagta 16002869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 14846890 - 14847009
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||  ||||| | ||||||||||| |||||| |||||    
T  14846890 ccctaattaataccactaacttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaagacaatatggtaatattaacgcacaaagcagac 14846989  T
Q  304 acattaattacaccgacaac 323  Q
    ||||||||||||||||||||    
T  14846990 acattaattacaccgacaac 14847009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 124 - 312
Target Start/End: Original strand, 30262429 - 30262615
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| | ||||||||||| | | |||||||||||||||||||| ||||       | ||||||| |||||||||||||| |||| |    
T  30262429 atttgattttaattttgtccataaatataaatccttattcaaattactagatgcatt-attatttttttc-taaacatgcccctaattaatactactaac 30262526  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||  ||||||| |||||||||||| |||||| |||||||||||||    
T  30262527 ttgtcttgaaatttgaaaagttagatttaagacacatacaaacaaatgacaatttggtaatattaacatacaaaatagacacattaatt 30262615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 94 - 314
Target Start/End: Original strand, 45183721 - 45183940
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||| || | |||||||||| ||||||  |||||| |||| ||||||| ||||||||||||||||||||||            
T  45183721 tactccctccgtccctatatctaaacacacgtttgattttatttttgtctctaaatgtaaactcctttttaaattactagatgcatttattatttttttt 45183820  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||| ||| | |||| |||||||| |||| |||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  45183821 ctaaacatacccctaatcaat-ctactaacttgtcttcaaatttgaaaagtcaaatttaatacacatataaacaaaggacaatttggtaatattaacaca 45183919  T
Q  294 caaaacagacacattaattac 314  Q
     |||||| ||| ||| |||||    
T  45183920 taaaacaaacatatttattac 45183940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 123 - 322
Target Start/End: Complemental strand, 17933921 - 17933723
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| |||||||||| || | ||||||||||||||||| |||||||||       ||||||||||| | |||||||||  | ||     
T  17933921 catttgattttatttttgtccctaaatatacatcctttttcaaattactagatacatttattattttt--cctaaacatactcataattaatattaatac 17933824  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaata-ttaacacacaaaacagacacattaattacaccgaca 321  Q
    ||||||||   ||||||||||||| ||||||||||||||||||||||  ||| ||| |||||| ||||||||||||| |||||||||||||||| |||||    
T  17933823 cttgtcttcgtatatgaaaagtcaaatttaatacacatacaaacaaatgacagtttggtaatatttaacacacaaaatagacacattaattacatcgaca 17933724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 144 - 314
Target Start/End: Original strand, 36309504 - 36309675
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    ||||||||||||  ||||| |||||  |||||||||||||||        |||||||||| ||||||||||||  |||| |||||||| |||||||||||    
T  36309504 ctaaatataaatctctttttaaattcttagatgcatttattattatttttcctaaacataaccctaattaataatactaacttgtcttaaaatatgaaaa 36309603  T
Q  243 gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    |||| ||||||||||||||||||||||  |||||||  |||||||||||||||||| |||||||||||||||    
T  36309604 gtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattac 36309675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 116 - 345
Target Start/End: Original strand, 45185147 - 45185377
Alignment:
Q  116 aaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc-ctaaacatacccctaattaat 214  Q
    |||||| ||||||| |||| ||||||  |||||| |||| || ||||||||||||| |||||||||||||         |||||||||||| |||| |||    
T  45185147 aaatactcatttgactttatttttgtctctaaatgtaaactcattttcaaattactggatgcatttattattattttttctaaacatacccttaatcaat 45185246  T
Q  215 accactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    || |||| |||||||| |||| |||||||||| | | ||||||||||||||||||| |||||||  ||||||||| ||| |||||||||||||| |||||    
T  45185247 actactaacttgtcttaaaatttgaaaagtcaaaatgaatacacatacaaacaaaggacaatttgataatattaatacataaaacagacacatttattac 45185346  T
Q  315 accgacaacnnnnnnnaagaaatgtgaaaaa 345  Q
    | |||||||       |||||||||||||||    
T  45185347 aacgacaacttttcttaagaaatgtgaaaaa 45185377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 307
Target Start/End: Complemental strand, 34158134 - 34157951
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| ||||||| ||||||| |||||||||||||| ||||||||||||       ||||||||||||  |||||||| | ||||     
T  34158134 catttgattttatttttgtccctaaatgtaaattcattttcaaattactatatgcatttattattattttcctaaacatacca-taattaatcctactaa 34158036  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacat 307  Q
     ||||||| |||||  ||||| || ||||||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||    
T  34158035 tttgtcttaaaatacaaaaagccaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacat 34157951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 317
Target Start/End: Complemental strand, 7172402 - 7172243
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||||||||||||||||||||       | ||||||| ||| |||| ||||| |||| ||| ||||||||||||||||||||  |||||| |    
T  7172402 ccttttcaaattactagatgcatttattatttttt-cataaacatgcccataataaatactactaacttatcttgaaatatgaaaagtcaattttaatgc 7172304  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    |||||||||||||  |||||||  |||||||||||||||||| ||||||||||||||||||    
T  7172303 acatacaaacaaatgacaattttataatattaacacacaaaatagacacattaattacacc 7172243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 313
Target Start/End: Original strand, 37600783 - 37600966
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaa-taccactatcttgtct 229  Q
    |||| |||||| ||||||| |||| ||  |||||||||| |||||||||||||||        |||||||||||||||||||| ||  |||| |||||||    
T  37600783 tttatttttgtccctaaatgtaaactctctttcaaattattagatgcatttattattttttttctaaacatacccctaattaaatattactaacttgtct 37600882  T
Q  230 tgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||||||||||||||||| ||||||||||||||||||||||  | ||||| | | |||||||||| ||| |||||||||||||||    
T  37600883 tgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggcagtattaacacataaatcagacacattaatta 37600966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 124 - 317
Target Start/End: Complemental strand, 31673814 - 31673620
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||||||||||||| | | | ||| ||||  | |||||||||||| |||| |||||||||       ||||||||||||| |||||||||| |||| |    
T  31673814 atttgattttacttttatccttcaatgtaaaccctttttcaaattacaagatacatttattattcttttcctaaacatacccttaattaatactactaac 31673715  T
Q  224 ttgtc-ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
     |||| ||||||| |||| ||||| ||||||||||||||||||||||| | ||||| |||||||||||| |||||| | ||||||||||||||||    
T  31673714 ctgtcattgaaatttgaatagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacatacaaaataaacacattaattacacc 31673620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 123 - 372
Target Start/End: Original strand, 1769337 - 1769584
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| ||||||| |||||| ||||   | |||||||||| |||||||||||||||       | ||||||||||| |||||||||| ||||     
T  1769337 catttgattttatttttgttactaaatgtaaacctcatttcaaattattagatgcatttattatttttt-cttaaacatacccttaattaatactactaa 1769435  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||  ||||| | |||||||||||| ||||||     ||||||||||||| || ||    
T  1769436 cttgtcttgaaatataaaaagtcaaatttaat-cacatacaaacaaatgacaatgtggtaatattaacatacaaaaggagtacattaattacactgataa 1769534  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacg 372  Q
    |       || |||||||||||| | |||||||| |||||||||| ||||    
T  1769535 catttcttaaaaaatgtgaaaaaagtaatggatgcctacattaagagacg 1769584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 163 - 346
Target Start/End: Original strand, 12998616 - 12998804
Alignment:
Q  163 caaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta-----tcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||| |||||||| ||||       |||||||||||||||||||||||| ||||     |||||||||||||||||||| |||| ||||||||||    
T  12998616 caaattactcgatgcattaattatttttttcctaaacatacccctaattaatactactaacttgtcttgtcttgaaatatgaaaggtcaaatttaataca 12998715  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaag 346  Q
    ||||||||||||| ||||||| |||||||| |||||||||| |  ||||||||||  || ||||||       ||||||||||||||||    
T  12998716 catacaaacaaaggacaatttagtaatattcacacacaaaatatgcacattaattgaactgacaacttttcttaagaaatgtgaaaaag 12998804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 137 - 312
Target Start/End: Complemental strand, 22590579 - 22590404
Alignment:
Q  137 tttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaata 236  Q
    ||||| ||||||||||||   |||||||||||||||||| |||||||||       | | |||||||||||||||||||| |||| ||| ||||| ||||    
T  22590579 tttgtccctaaatataaacctcttttcaaattactagatccatttattattatttccttgaacatacccctaattaatactactaacttatcttgcaata 22590480  T
Q  237 tgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||| |||||| ||  |||||||||| | ||||||| || ||||||||||| |||| |||||||||||||    
T  22590479 tgaaaagtcaaatttaacacttatacaaacaatggacaatttggtgatattaacacaaaaaatagacacattaatt 22590404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 195 - 350
Target Start/End: Original strand, 24276517 - 24276670
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||||||||||||||  |||| ||||| |||||||||| ||||| | ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  24276517 taaacatacccctaattaatattactaacttgttttgaaatatgtaaagtaaaatttaatacacatacaaacaaatgacaatttggtaatattaacacac 24276616  T
Q  295 aaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
      || |||||||||||||| ||  |||||       ||||||||||||||||||||    
T  24276617 --aatagacacattaattatactaacaactttttttaagaaatgtgaaaaaggcaa 24276670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 23399737 - 23399835
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||| ||||||||||| |||| ||||  |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  23399737 taaacatacctctaattaatactactaacttggtttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 23399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 3113491 - 3113614
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||||  |||||||||| |  | ||| |||||||||||||||| | | |||||||||||||| |||||||  |||||||  ||||||||||||    
T  3113491 cctaaacataccattaattaatactataaacttatcttgaaatatgaaaaattaaatttaatacacatataaacaaaagacaatttgataatattaacac 3113590  T
Q  293 acaaaacagacacattaattacac 316  Q
    |||||||||||| |||||||||||    
T  3113591 acaaaacagacatattaattacac 3113614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 217 - 323
Target Start/End: Complemental strand, 14739553 - 14739447
Alignment:
Q  217 cactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||| |||||||||||||||||| ||||| |||||||||||| |||||||||| | ||||| |||||||||||| | |||| | |||||||||||||||    
T  14739553 cactaacttgtcttgaaatatgaatagtcacatttaatacacacacaaacaaaggataatttggtaatattaacatataaaataaacacattaattacac 14739454  T
Q  317 cgacaac 323  Q
     ||||||    
T  14739453 ggacaac 14739447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 122 - 312
Target Start/End: Original strand, 40601927 - 40602118
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncc-taaacatacccctaattaataccact 220  Q
    |||||||| |||| |||||| | ||||| ||||   ||||||||||||||||||||||||||||          || |||||||||||| || ||  |||    
T  40601927 ccatttgactttatttttgtccttaaatgtaaacctcttttcaaattactagatgcatttattattattttttatacacatacccctaagtactagtact 40602026  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    | ||||  |||||||||||||| ||| ||||||||||||||||||||||| | ||||| |||||||||||||| |||  |||||||||||||    
T  40602027 aacttgcattgaaatatgaaaaatcaaatttaatacacatacaaacaaaggataatttagtaatattaacacataaataagacacattaatt 40602118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 23280865 - 23280699
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||| |||||| |||||||||||||| |||||   |||||||||||||| || | ||||||        | ||||| |||| ||||||||||| |||| |    
T  23280865 attttattttatttttgttcctaaatgtaaatctattttcaaattactaaatacttttatt---tttttcttaaacgtacctctaattaatactactaac 23280769  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||| |||| |||||||||| ||| |||||||| |||||||||||||| ||||||| ||||||||||||||    
T  23280768 ttggcttgtaatatgaaaaatcaaatttaataaacatacaaacaaaggacaatttagtaatattaacaca 23280699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 25888740 - 25888620
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    |||||||| |||||||||||  ||||  ||||||| ||||||||||| ||| ||||||||||||||||||||||  ||||| |  ||||||||||| |||    
T  25888740 aaacatactcctaattaatagtactaatttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatatgataatattaacataca 25888641  T
Q  296 aaacagacacattaattacac 316  Q
    ||| ||||| |||||||||||    
T  25888640 aaatagacatattaattacac 25888620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 147 - 312
Target Start/End: Complemental strand, 34882864 - 34882699
Alignment:
Q  147 aatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtca 246  Q
    ||||||||| | |||| ||||||||| ||  ||||||||       ||||||||||  | |||||||||| ||||  || |||| |||||||||||||||    
T  34882864 aatataaatccttttttaaattactatatttatttattatttttttcctaaacatattcttaattaatacgactaatttatcttaaaatatgaaaagtca 34882765  T
Q  247 gatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     |||||| |||||||||||||||  | |||||  |||||||||||||||||| |||||||||||||    
T  34882764 aatttaacacacatacaaacaaaagataatttgataatattaacacacaaaatagacacattaatt 34882699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 40807870 - 40808037
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| ||||  |||||||  ||||||||| |||| |||||| | ||||| ||||   | ||||||||||||| ||||||||| ||       |    
T  40807870 tactccctccgtccctacatgtaaacccccatttgactttatttttgtccttaaatgtaaacctcatttcaaattactacatgcatttaatattattttc 40807969  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacata 261  Q
    ||||||||||  ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  40807970 ctaaacatacaactaatcaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacata 40808037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 3005983 - 3006104
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| ||| ||||||||| ||| |||||| |||| |||||||||||||| |||||  ||||||||||||||||||| ||||||||       |    
T  3005983 tactccctccgtcccggtatgtaaacacctatttgactttatttttgttcctaaatgtaaatctcttttcaaattactagatgaatttattattttcttc 3006082  T
Q  194 ctaaacatacccctaattaata 215  Q
    ||||| ||||||||||||||||    
T  3006083 ctaaagatacccctaattaata 3006104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 14522266 - 14522379
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtc-agatttaata 255  Q
    |||||||||||||||||||||||||||||       ||||||||||||| |||||||||| |||| ||| ||||||||| |||| |||| | ||||||||    
T  14522266 ccttttcaaattactagatgcatttattatttttttcctaaacatacccttaattaatactactaacttatcttgaaatttgaatagtcaaaatttaata 14522365  T
Q  256 cacatacaaacaaa 269  Q
    ||||| ||||||||    
T  14522366 cacatgcaaacaaa 14522379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 314
Target Start/End: Complemental strand, 44255570 - 44255480
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    ||||||| |||||| |||||||| ||||||||||| ||||||||||  |||||||  |||||||||||||||||| || ||||||||||||    
T  44255570 ttgtctttaaatataaaaagtcaaatttaatacacgtacaaacaaatgacaatttgataatattaacacacaaaaaaggcacattaattac 44255480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 248 - 381
Target Start/End: Original strand, 16644049 - 16644182
Alignment:
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaagg 347  Q
    |||||| ||||||||| |||||||||||||| || |||||||||||||||| | |||||||||||||||  |||||       ||||||||||||||| |    
T  16644049 atttaacacacatacagacaaagaacaatttagtgatattaacacacaaaatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatg 16644148  T
Q  348 caatggatggctacattaagggacggagggagta 381  Q
    |||||  ||  |||||  ||||||||| ||||||    
T  16644149 caatgagtgcttacatacagggacggaaggagta 16644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 35794889 - 35794777
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||| |||||| |||||||| || |  |||||   ||||||||||||||| ||||||||||||||||||||||  |||||||  ||||||||| |||    
T  35794889 ctaaacacaccccttattaatactaccaatttgtccgaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaataca 35794790  T
Q  294 caaaacagacaca 306  Q
    ||||| |||||||    
T  35794789 caaaatagacaca 35794777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 124 - 269
Target Start/End: Original strand, 45283376 - 45283519
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| |||||| | ||||| ||||||| ||||||||||| ||||| | |||||||       |||||||||| |||||||||||   |||| |    
T  45283376 atttgactttatttttgtccttaaatgtaaattctttttcaaattattagatacgtttattaattttt-cctaaacatatccctaattaatgttactaac 45283474  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    ||| ||||||||||||| ||||| ||||||||| ||||||||||||    
T  45283475 ttg-cttgaaatatgaatagtcaaatttaatacccatacaaacaaa 45283519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 319
Target Start/End: Original strand, 41371762 - 41371873
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||| | ||||||||||| |||| |||||||||||||||||||||||| ||               ||||||||||||||  ||||||||||||    
T  41371762 cctaaacataactctaattaatactactaacttgtcttgaaatatgaaaagtcaaat---------------acaaagaacaatttaataatattaacac 41371846  T
Q  293 acaaaacagacacattaattacaccga 319  Q
    |||| ||||||||||||| ||||||||    
T  41371847 acaacacagacacattaaatacaccga 41371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 34869940 - 34869849
Alignment:
Q  231 gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||||| |||| || |||| | |||||||  |||||||  ||||||||| |||||||| | |||||||| ||||||||||||    
T  34869940 gaaatatgaaaagtcaaattttatgcacagataaacaaatgacaatttgataatattaatacacaaaatatacacattagttacaccgacaa 34869849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 2031362 - 2031264
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||| ||||||||||| ||||  || |||||||||||||||| |   |||||||||| |||| ||||||| |||||||  | |||||||||||    
T  2031362 taaacatacctctaattaatactactaatttatcttgaaatatgaaaaatataatttaatacatatacgaacaaaggacaatttgattatattaacaca 2031264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 10709460 - 10709386
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||| ||||||||| ||| |||| ||||| |||||||||||| ||||| |||||||||| ||| |||||||    
T  10709460 taaacatatccctaattattactactaacttgttttgaaatatgaatagtcaaatttaatacagataaaaacaaa 10709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 261
Target Start/End: Complemental strand, 14907331 - 14907213
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| |||||||||||| |||||||||||||||||||  ||||| ||        | ||||||||||| ||||||||||  ||| ||| |||||||||||    
T  14907331 ttgtccctaaatataaaatccttttcaaattactagacacatttttt-----tttcttaaacatacccttaattaatactgctaacttatcttgaaatat 14907237  T
Q  238 gaaaagtcagatttaatacacata 261  Q
    ||||| ||| |||||| |||||||    
T  14907236 gaaaaatcaaatttaacacacata 14907213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 33385380 - 33385318
Alignment:
Q  207 taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    |||||||||| |||| |||||||||||||| ||||||||| |||||||| ||||| |||||||    
T  33385380 taattaatactactaacttgtcttgaaatacgaaaagtcaaatttaatatacatataaacaaa 33385318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 14522640 - 14522685
Alignment:
Q  271 aacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||    
T  14522640 aacaatttggtaatattaacacacaaaacatacacattaattacac 14522685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 12894196 - 12894280
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||||| | ||||||||  || |||||| ||||||||||||    
T  12894196 tcttgaaatatgaaaagtcaaactaaatacaaatacaaacaaatgacaatatggtaatatttccatacaaaatagacacattaat 12894280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 14906683 - 14906627
Alignment:
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||||| | ||||| ||||||||||||||||||| ||||| ||||||||||    
T  14906683 atacaaacaaaggataatttggtaatattaacacacaaaatagacatattaattaca 14906627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 35709057 - 35709180
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||| | |||||||||| |||| ||  |||| | ||||||||||||| |||||||||||| | | || ||  |||||||  ||||||||||||    
T  35709057 cctaaatatactcataattaatactactaactaatcttaacatatgaaaagtcaaatttaatacacacatatacgaaagacaatttgataatattaacac 35709156  T
Q  293 acaaaacagacacattaattacac 316  Q
    | |||  ||||||||||| |||||    
T  35709157 ataaactagacacattaactacac 35709180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 3006777 - 3006859
Alignment:
Q  231 gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||||||| ||||||||  ||||||||||||||| | |||  | ||||| |||||||||||||| |||| ||||| ||||||||    
T  3006777 gaaatataaaaagtcaattttaatacacatacagataaatgataatttagtaatattaacacataaaatagacatattaatta 3006859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 309
Target Start/End: Complemental strand, 41541656 - 41541581
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    ||||||||||||||| |||||||  ||||| ||| |||| |||||||  ||||||| |||||||||| ||||||||||    
T  41541656 aaatatgaaaagtcaaatttaat--acatataaataaaggacaatttgataatattgacacacaaaatagacacatta 41541581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 7727318 - 7727375
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacata 261  Q
    ||||||||||||| |||| ||||||||| |||||||||||||| ||  ||||||||||    
T  7727318 ccctaattaatactactaacttgtcttggaatatgaaaagtcaaatgaaatacacata 7727375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 43182679 - 43182559
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||| | ||||  || | || ||||| ||||| | | |||||||||||||| | | ||||||||| ||  |||||||||||||    
T  43182679 ctaaacatacccctaattaatcctactaatttattttaaaatacgaaaatttaaatttaatacacatatatataaagaacaa-ttaataatattaacaca 43182581  T
Q  294 caaaacagacacattaattaca 315  Q
     |||| |||||| |||| ||||    
T  43182580 taaaatagacacgttaactaca 43182559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 4273862 - 4273947
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaatac 216  Q
    |||| |||||| | ||||| |||| | ||||||||||||||||||||||||||||        |||||||||||| ||||||||||    
T  4273862 tttatttttgtccttaaatgtaaacttcttttcaaattactagatgcatttattattttttttctaaacatacccttaattaatac 4273947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 2303311 - 2303248
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||||||| |||| |||||| || |||| |||| |||||||||||||||||||| | |||||||    
T  2303311 ccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagattcgtttatta 2303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 2327905 - 2327842
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||||||| |||| |||||| || |||| |||| |||||||||||||||||||| | |||||||    
T  2327905 ccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagattcgtttatta 2327842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 10860918 - 10860830
Alignment:
Q  143 cctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttg 231  Q
    ||||||| ||||| | | |||||||||||||||||||||||||       |||||||||  || |||||||||| |||| |||||||||    
T  10860918 cctaaatgtaaatccatcttcaaattactagatgcatttattatatttttcctaaacatttccataattaatactactaacttgtcttg 10860830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 16357234 - 16357143
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||| ||||| |||| |||||||  |||| |||| ||||| |||||| ||||||| ||||  |||||||||||||| | ||||||| ||||    
T  16357234 tactccctccgtccctatatgtaaccacccctttgtttttatttttgtccctaaatgtaaaccccttttcaaattacaacatgcattaatta 16357143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 45283827 - 45283862
Alignment:
Q  280 gtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||||||| |||||||||||||||||||||    
T  45283827 gtaatattaacacataaaacagacacattaattaca 45283862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 25477443 - 25477185
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| ||||||| || | |  |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||    
T  25477443 catttgattttatttttgtccctaaatgtatacttattttcaaattactagatgcatttattatttttttcctaaacatacccctaattaatactactat 25477344  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||| |||||    
T  25477343 cttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacataaaacagacacattaattacactgacaa 25477244  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       ||||||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  25477243 cttttcttaagaaatgtgaaaaaagcaatggatgcctacattaagggacatagggagta 25477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 94 - 381
Target Start/End: Complemental strand, 46729552 - 46729266
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||| |||||| ||||||| |||||  ||||| |||||| |||||||||||||||       |    
T  46729552 tactccctccgtccctatatctaaacacccatttgattttatttttgtccctaaatgtaaatctctttttaaattattagatgcatttattatttttttc 46729453  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    | |||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  46729452 ccaaacatacccctaattaataccatcatcttgccttgaaatatgaaaagtcaaatttaatacacatacaaacataggacaatttcgtaatattaacaca 46729353  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||||| ||||||       || ||||||||||||| ||||| ||| ||||||||||||||| ||| ||||    
T  46729352 caaaacagacacattaattacactgacaacttttcttaa-aaatgtgaaaaagacaatgaatgtctacattaagggacgaaggaagta 46729266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 93 - 381
Target Start/End: Original strand, 22750699 - 22750987
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  ||| ||||||||||| |||||||||||||| ||||| | ||||||||||| |||||||||||||||           
T  22750699 atactccctccgtccctatatgtaaccaccaatttgattttatttttgttcctaaatctaaatcctttttcaaattagtagatgcatttattattatttt 22750798  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||| ||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||| ||    
T  22750799 cctatacatacccctaattaatactactaagttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaatac 22750898  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||| ||||||||||||| ||||||       ||||||||||||||| |||| |   |  |||||||||||||||||||||||    
T  22750899 acaaaacagatacattaattacacagacaacttttcttaagaaatgtgaaaaatgcaaagagggattacattaagggacggagggagta 22750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 122 - 383
Target Start/End: Complemental strand, 51787989 - 51787729
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| | |||||||||| ||||||| |||||||||||| |||||||||       |||||||||| ||||||||||||| | ||    
T  51787989 ccatttgattttatttttgtccttaaatataaactcctttttaaattactagatacatttattatttttt-cctaaacatatccctaattaatactatta 51787891  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  51787890 ttttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgtctatttcgtaatattaacacacaaaacagacacattaattacaccgaca 51787791  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtaca 383  Q
    ||       ||||||||||||||| | ||||  || ||||||||||| ||||||||||||||    
T  51787790 acttttcttaagaaatgtgaaaaatggaatgagtgcctacattaaggaacggagggagtaca 51787729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 136 - 382
Target Start/End: Original strand, 20262296 - 20262540
Alignment:
Q  136 ttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaat 235  Q
    |||||| ||||||| ||||  | |||||||||||||| |||||||||||        | ||||||||||| |||||||||| |||||||||| |||||||    
T  20262296 ttttgtccctaaatgtaaacccattttcaaattactaaatgcatttatt--ttttttcttaaacatacccttaattaatactactatcttgttttgaaat 20262393  T
Q  236 atgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaa 335  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||    
T  20262394 atgaaaagtcaaatttaatacacatacaaacaaataacaatttcgtaatattaacacacaaaacagacacattaattacactgacaacttttcttaagaa 20262493  T
Q  336 atgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    |||||||||||||||||  || ||| |||||||||| ||||||||||    
T  20262494 atgtgaaaaaggcaatgagtgtctatattaagggacagagggagtac 20262540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 123 - 381
Target Start/End: Original strand, 39237475 - 39237738
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattcctttt-caaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||||||||| || |||  |||||||||||  | |||| |||||||||||||| ||||||||       |||||||||||||||||||||||  | ||    
T  39237475 catttgattttatttctgtctctaaatataaaaccttttttcaaattactagatgtatttattatttttttcctaaacatacccctaattaataatatta 39237574  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39237575 tcttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacacacaaaacagatacattaattacactgaca 39237674  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatgg----ctacattaagggacggagggagta 381  Q
    ||       || ||||||||||||| |||||||||     ||||||||||||||||||||||||    
T  39237675 acttttcttaaaaaatgtgaaaaagacaatggatgcgtgcctacattaagggacggagggagta 39237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 120 - 363
Target Start/End: Complemental strand, 24072988 - 24072745
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||       ||||||||||||| |||||||||| ||    
T  24072988 acccatttgattttatttttgtccataaatataaaccccttttcaaattactagatgcatttattatttttttcctaaacatacccttaattaatactac 24072889  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
     |||||||||||||||||||||||||| ||||||||||||| ||| ||||  |||||||| ||||||||||||| |||||||||||||||||||||  ||    
T  24072888 catcttgtcttgaaatatgaaaagtcaaatttaatacacattcaagcaaatgacaatttcataatattaacacaaaaaacagacacattaattacattga 24072789  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacat 363  Q
    ||||       ||||||||| |||||| |||||| || ||||||    
T  24072788 caacttttcttaagaaatgtaaaaaagacaatgggtgcctacat 24072745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 94 - 384
Target Start/End: Complemental strand, 12624943 - 12624653
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| |||||||  ||||||||||||||| |||||| | ||||| |||| ||||||||||||||||||||||||||| ||       |    
T  12624943 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagatgcatttactattattttc 12624844  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||||| |||||| | ||||  ||||||| |||||  |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  12624843 ctaaacatacccctcattaatcctactaatttgtcttaaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 12624744  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacat 384  Q
     |||| || ||||||||||||||  |||||       ||||||||||||||| |||| ||  || |||||  |||||||||||||||||||    
T  12624743 taaaatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaacggggggttacatatagggacggagggagtacat 12624653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 196 - 381
Target Start/End: Complemental strand, 5448807 - 5448622
Alignment:
Q  196 aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    |||||||||| |||||||||| |||| | | |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5448807 aaacatacccataattaatactactaacatatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacaca 5448708  T
Q  296 aaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||||||||||| |  || |||       |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  5448707 aaacagacacattaattatattgataacatttcttaagaaatgtgaaaaaggcaatggatgcctacattaagggacggagcgagta 5448622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 121 - 316
Target Start/End: Complemental strand, 43801028 - 43800833
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||||| |||| |||||| ||||||| ||||  || |||||||||||||||| |||||||||       |||||| ||||||||||||||||| ||     
T  43801028 cccatttgactttatttttgtccctaaatgtaaaccccctttcaaattactagatacatttattattattttcctaaatatacccctaattaatactacc 43800929  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    | |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  43800928 aacttgtcttgaaatatgaaaagtcaaattaaatacacatacaaacaaaggacaatttggtaatattaacacacaaaacagacaccttaattacac 43800833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 124 - 322
Target Start/End: Original strand, 41945661 - 41945858
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||| |||||| |||||| ||||||| ||||| |||||||||||||||| ||||||||||||       ||||||||||| |||| ||||||  ||||||    
T  41945661 attttattttatttttgtccctaaatgtaaatcccttttcaaattactatatgcatttattatttttttcctaaacatactcctacttaatattactatc 41945760  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||| |||| |||||| ||||||||||||||| |||||    
T  41945761 ttgtcttgaaatatgaaaagtcaaatttaatacatatacaaacaaaggacaatttcgtaatattatcacataaaaca-acacattaattacactgacaa 41945858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 371
Target Start/End: Original strand, 48472366 - 48472631
Alignment:
Q  106 ccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacataccc 205  Q
    |||||||| |||| ||||||||||||||| ||||||   ||||| |||| |  ||||||||||| || |||| |||||||       ||||| |||||||    
T  48472366 ccctgtatctaaacacccatttgattttatttttgtctttaaatgtaaactttttttcaaattaataaatgcttttattatttttttcctaa-cataccc 48472464  T
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacac 305  Q
    ||||||||||| | |||||||||||||||||| |||||||| |||| ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||    
T  48472465 ctaattaatactattatcttgtcttgaaatataaaaagtcaaatttcatacacatacaaagaaaggataatttcgtaatattaacacacaaaatagacac 48472564  T
Q  306 attaattacaccgacaac-nnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggac 371  Q
    ||||||||||| ||||||        || ||||||||||||| ||||||||| ||||||||||||||    
T  48472565 attaattacactgacaacttttcttaaaaaaatgtgaaaaagacaatggatgcctacattaagggac 48472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 316
Target Start/End: Original strand, 33246382 - 33246577
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||       | ||||||||| |||||||||||| ||    
T  33246382 acccatttgattttatttttgtccctaaatgtaaactctttttcaaattactagatgcatttattatttttttc-taaacatactcctaattaatactac 33246480  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    || |||||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||| |||||  ||||||||||    
T  33246481 taacttgtcttgaaatatgtaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaacacacaaaatagacattttaattacac 33246577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 122 - 370
Target Start/End: Complemental strand, 54438729 - 54438481
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    |||||| |||||| |||||| ||||||| |||||  |||||||||||| |||| ||||||||||        ||||||||| || ||||||||||| |||    
T  54438729 ccattttattttatttttgtccctaaatgtaaatctcttttcaaattagtaga-gcatttattattttttttcctaaacatgcctctaattaatactact 54438631  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||| || |||    
T  54438630 atcttgttttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttcgtaatattaacacacaaaacagacactttaattatacggac 54438531  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaaggga 370  Q
    ||        |||||||||||||||| ||||||||  |||||||||||||    
T  54438530 aatttttcttaagaaatgtgaaaaagacaatggatacctacattaaggga 54438481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 122 - 381
Target Start/End: Complemental strand, 16070650 - 16070391
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||| |||| | |||| | ||||||| ||||  || ||| ||||||||||||| ||||||||       || |||| |||||||||||||||| ||||    
T  16070650 ccatttaatttaatttttatccctaaatgtaaaccccattttaaattactagatgtatttattattttttcccaaaacgtacccctaattaatactacta 16070551  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
     ||||| |||||||||||||||||| |||||||||| ||| |||||||  | ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  16070550 acttgtattgaaatatgaaaagtcaaatttaatacatatataaacaaaagataatttggtaatattaacacacaaaacagacacattaattacactgaca 16070451  T
Q  322 acnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
     |       |||||||||||||||| |||| | || ||||||||||||||||||||||||    
T  16070450 gcatttcttaagaaatgtgaaaaagacaataggtgcctacattaagggacggagggagta 16070391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 159 - 384
Target Start/End: Complemental strand, 52226202 - 52225976
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    |||||||||||||||||||||||||||        || ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||    
T  52226202 ttttcaaattactagatgcatttattattatttttcttaaacatacccctaattaatactactaacttgtcttgaaatatgaaaagtcaaatttaataca 52226103  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatgg 357  Q
    |||| |||||||| |||||||  ||||||||||| | ||||||||||||||||||| || ||||||       || ||||||||||||| |||| | |      
T  52226102 catataaacaaaggacaatttgataatattaacatataaaacagacacattaattatactgacaacatttcttaaaaaatgtgaaaaagacaataggtac 52226003  T
Q  358 ctacattaagggacggagggagtacat 384  Q
    ||||||||| |||||||||||||||||    
T  52226002 ctacattaaaggacggagggagtacat 52225976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 40411229 - 40411405
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||| | |||| ||||||||||||||||||||||||||||||       | |||||||||||||||||||||  | ||    
T  40411229 ccatttgattttatttttgtccctaattgtaaactccttttcaaattactagatgcatttattatttttttcttaaacatacccctaattaatattatta 40411328  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  40411329 tcttgtcttgaaatatgaaaagttaaatttaatacacatacaaacaaatgacaatttcataatattaacacacaaaa 40411405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 120 - 381
Target Start/End: Original strand, 52552396 - 52552656
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| ||||||||||||| |||||| |||||| ||||| |||||||||       | |||||||||||||||||||||| ||    
T  52552396 acccatttgactttatttttgtccctaaatataaatccctttttaaattattagatacatttattatttttt-cttaaacatacccctaattaatactac 52552494  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || ||| |||||||||||||||||||| |||| |||||| ||||||||||| | ||||| |||||||||||||| ||| |||||| ||| ||||||| ||    
T  52552495 taacttatcttgaaatatgaaaagtcaaattttatacacgtacaaacaaaggataatttggtaatattaacacataaagcagacaaatttattacactga 52552594  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||       || ||| ||||||| |||| ||| || ||||||||||||||||| ||||||    
T  52552595 caacttttcttaaaaaacgtgaaaagggcattgggtgcctacattaagggacggatggagta 52552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 350
Target Start/End: Original strand, 52198593 - 52198842
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaac 199  Q
    ||||| |||| |||||||  ||||||||||||| | |||||| ||||||| ||||  ||||||||||||||||||| |||||||||       |||||||    
T  52198593 ctccgtccctatatgtaagcacccatttgattt-agttttgtccctaaatgtaaaccccttttcaaattactagatacatttattatttttttcctaaac 52198691  T
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||||||||||||||||| |||| ||||| ||||||||| |||||||| ||| |||||||||||||| |||  | ||||| |||||||||| ||||| |||    
T  52198692 atacccctaattaatactactaacttgttttgaaatataaaaagtcaaattcaatacacatacaaataaaagataatttggtaatattaatacacagaac 52198791  T
Q  300 agacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    ||||| ||||||||||| ||||||       ||||||||||||||| ||||    
T  52198792 agacatattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 52198842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 111 - 315
Target Start/End: Complemental strand, 22651694 - 22651490
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaat 210  Q
    |||||||  ||||||||||||||| |||| | | ||||| |||| ||||||||||||||||||||||||||||||       ||||||||||||||||||    
T  22651694 tatgtaatcacccatttgattttatttttatccttaaatgtaaactccttttcaaattactagatgcatttattatttttttcctaaacatacccctaat 22651595  T
Q  211 taataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||||  | || |||||||||||| | | ||||||| ||||||||||||||||||||||  ||||||| |||||||||||| |||||| | |||||||||    
T  22651594 taatattaataacttgtcttgaaacacgtaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacatacaaaataaacacattaa 22651495  T
Q  311 ttaca 315  Q
    |||||    
T  22651494 ttaca 22651490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 91 - 376
Target Start/End: Complemental strand, 50783021 - 50782743
Alignment:
Q  91 aaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnn 190  Q
    |||||||  ||||| |||| ||| |||  ||||||||||||||| ||||||||||||||||||   |||||| || |||||||||||||||||||         
T  50783021 aaatacttcctccgtccctatatctaagcacccatttgattttatttttgttcctaaatataacc-cctttttaagttactagatgcatttattattttt 50782923  T
Q  191 nncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaac 290  Q
      |||||||||||||||||||||||  | |||||||     |||||| |||| | | | ||||||||||||||||||||| ||||||||||||||||||     
T  50782922 t-cctaaacatacccctaattaatattattatcttg-----aaatataaaaaattaaagttaatacacatacaaacaaaggacaatttcgtaatattaag 50782829  T
Q  291 acacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagg 376  Q
    |||||||||||||||||||||||||| ||||||       ||||||||||||||||  | ||| || ||| |||||||||||||||    
T  50782828 acacaaaacagacacattaattacactgacaacttttcttaagaaatgtgaaaaagatattgggtgcctatattaagggacggagg 50782743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 124 - 350
Target Start/End: Original strand, 30153112 - 30153336
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| ||||||  |||||| ||||| | |||| |||||| |||||||||||||||       ||||||||||| | |||||||||| |||| |    
T  30153112 atttgactttatttttgtctctaaatgtaaatccatttttaaattattagatgcatttattatttttt-cctaaacatactc-taattaatactactaac 30153209  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| | ||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  30153210 ttgtcttgaaatatgaaaagtcaaatttaatacacatacaaataaaggataatttggtaatattatcacacaaaacagacacattaattacactgacaac 30153309  T
Q  324 nnnnnnnaagaaatgtgaaaaaggcaa 350  Q
           ||||||||||||||| ||||    
T  30153310 ttttcttaagaaatgtgaaaaacgcaa 30153336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 131 - 377
Target Start/End: Complemental strand, 32237043 - 32236795
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatg--catttattannnnnnncctaaacatacccctaattaataccactatcttgtc 228  Q
    |||| |||||| ||||||||||||| || ||| |||||||||||||  |||||||||        ||||||||||||||||||||||  ||||  || |     
T  32237043 tttatttttgtccctaaatataaatccccttttaaattactagatgtgcatttattattttttttctaaacatacccctaattaatattactaatttata 32236944  T
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnn 328  Q
    |||||||||||||||||| |||||||||||||| |||||||||| |||||  |||||||||||||||||||||||| ||||||||||| ||||||         
T  32236943 ttgaaatatgaaaagtcaaatttaatacacatataaacaaagaataatttgataatattaacacacaaaacagacatattaattacactgacaacatttc 32236844  T
Q  329 nnaagaaatgtgaaaaaggcaatggatggctacattaagggacggaggg 377  Q
      || |||| |||| || ||||||| |||||| |||||||||| |||||    
T  32236843 taaaaaaatatgaataaagcaatgggtggctatattaagggactgaggg 32236795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 93 - 301
Target Start/End: Complemental strand, 20116699 - 20116490
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| ||| |||  |||| |||||||||   ||||| ||| ||||||||  ||||||||||||||||||||||||||||            
T  20116699 atactccctccgtccctatatctaagcacccgtttgattttgtctttgtcccttaatataaaccccttttcaaattactagatgcatttatttatttttg 20116600  T
Q  193 cctaaacatacccctaatt-aataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||||||||||||||| ||||| | ||||||||||||||||||||||| ||| ||||||||||||||||||||||  |||||||| |||||||||||    
T  20116599 tctaaacatacccctaatttaatactattatcttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaaatgacaatttcctaatattaaca 20116500  T
Q  292 cacaaaacag 301  Q
    ||||||||||    
T  20116499 cacaaaacag 20116490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 43509301 - 43509107
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccact 220  Q
    |||||||| |||| |||||| ||||||| |||| |||||||||||||| |||||||||||||||        || ||| ||||||||||||||||| |||    
T  43509301 ccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagatgcatttattattttttttcttaaagatacccctaattaatactact 43509202  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |  |||||||||||| |||||||| | ||||||||||||||||||||||  |||||||  |||||||||||||||||||| |||||||||||||||    
T  43509201 aatttgtcttgaaatttgaaaagttaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaaca-acacattaattacac 43509107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 120 - 323
Target Start/End: Complemental strand, 34543926 - 34543720
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacat-acccctaattaatacca 218  Q
    ||||||||||||||  |||||||||||| | |||| | ||||||||||||||||||||||||||||       ||||||||| | || |||||||||| |    
T  34543926 acccatttgattttctttttgttcctaattgtaaacttcttttcaaattactagatgcatttattatttttt-cctaaacattatccataattaatacta 34543828  T
Q  219 ctatct---tgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||| ||   | |||||||||||||||||||| | ||||||||||||||||||||| |  |||| ||||||||||||||||||| ||||||||||||||||    
T  34543827 ctaactaattatcttgaaatatgaaaagtcaaaattaatacacatacaaacaaaggattatttggtaatattaacacacaaaatagacacattaattaca 34543728  T
Q  316 ccgacaac 323  Q
    | ||||||    
T  34543727 cggacaac 34543720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 158 - 323
Target Start/End: Complemental strand, 54359865 - 54359702
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||||||||||||||||||||||       ||||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  54359865 cttttcaaattactagatgcatttattatttttt-cctaaacatacacctaattaatactactatcttgtcttgaaatatgaaaagttaaatttaataca 54359767  T
Q  258 catacaaacaaagaacaatttcgtaa---tattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||    ||||||||||||||||||   |||||||||| ||||||||||||||||||| || ||||||    
T  54359766 cata----caaagaacaatttcgtaatattattaacacataaaacagacacattaattatactgacaac 54359702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 124 - 319
Target Start/End: Complemental strand, 5168196 - 5168001
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| ||||||  |||||| ||||  | |||||| |||||||||||||||| ||         |||||||||||| |||||||||| |||| |    
T  5168196 atttgattttatttttgtctctaaatgtaaacccgttttcatattactagatgcatttttttttttttttctaaacatacccttaattaatactactagc 5168097  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    |||| |||||||||||||| | | ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  5168096 ttgtattgaaatatgaaaaattaaatttaatacacatacaaacaaatgacaatttagtaatattaacgcacaaaacagacatattaattacaccga 5168001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 39414437 - 39414265
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| ||||||||||||  ||||||||||||||||||  |||||||||       ||||||||||||||||||||||||||||| ||| |||||||||||    
T  39414437 ttgtccctaaatataaaccccttttcaaattactagacacatttattatttttttcctaaacatacccctaattaataccactaacttatcttgaaatat 39414338  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||| |||||  |||||||||||||||  | |||||  |||||||||||||||||| ||||| |||||||    
T  39414337 gaaaagtcaaattta--acacatacaaacaaaagataatttgataatattaacacacaaaatagacatattaatt 39414265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 20291535 - 20291366
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||||  ||||||||||||||| ||| ||||||||       |||||||||| || |||||||||| |||| ||| ||||||||||||||||||    
T  20291535 taaatataaatctcttttcaaattactaaatgtatttattacttttttcctaaacatatcc-taattaatactactaacttatcttgaaatatgaaaagt 20291437  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    || ||||||||||||||||||||||  | ||||| ||||||||||| ||||||| ||||||||||||||||    
T  20291436 caaatttaatacacatacaaacaaatgataatttagtaatattaacccacaaaatagacacattaattaca 20291366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 123 - 345
Target Start/End: Original strand, 37625011 - 37625234
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccacta 221  Q
    |||||||||||| |||||| ||||||| ||||   |||||||||||| |||||||||||||||        ||||||||||| | |||||||||| ||||    
T  37625011 catttgattttatttttgtccctaaatgtaaacctcttttcaaattattagatgcatttattattatttttcctaaacatactcttaattaatactacta 37625110  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgaca 321  Q
     ||  |||||||||||||||||||| |||||||||||||| |||||||  | ||||| ||||||||||||||||||| | |||||||||||| || ||||    
T  37625111 actaatcttgaaatatgaaaagtcaaatttaatacacatataaacaaatgataatttagtaatattaacacacaaaataaacacattaattatactgaca 37625210  T
Q  322 acnnnnnnnaagaaatgtgaaaaa 345  Q
    ||       |||||||||||||||    
T  37625211 acttttcttaagaaatgtgaaaaa 37625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 312
Target Start/End: Original strand, 51918539 - 51918728
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataa--attccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaatacc 217  Q
    ||||||||||||||| |||||| ||||||| |||  || |||||||||||||||||||||||||||||       ||| ||||||||| ||||||||||     
T  51918539 acccatttgattttatttttgtccctaaatgtaattatcccttttcaaattactagatgcatttattatttttt-cctcaacatacccttaattaatact 51918637  T
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
      || |||||||||||||||||||||||| ||||||||    ||||||||||||| ||||| |||||| |||||||||||| |||||||||||||    
T  51918638 gttaacttgtcttgaaatatgaaaagtcaaatttaata----tacaaacaaagaataatttggtaatactaacacacaaaatagacacattaatt 51918728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 123 - 323
Target Start/End: Complemental strand, 5933104 - 5932904
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||| |||||        | ||||||||| | |||||||||  ||||     
T  5933104 catttgactttatttttgtccctaaatataaatttcttttcaaattactagatgcaattattttttttttcttaaacatactcataattaataatactaa 5933005  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||||||   |||| | | |||||||||||||| |||||||  |||||||  |||||||||||||||||||| ||||||||||||||| |||||    
T  5933004 cttgtcttgaaattaaaaaaattaaatttaatacacataaaaacaaatgacaatttgataatattaacacacaaaacaaacacattaattacactgacaa 5932905  T
Q  323 c 323  Q
    |    
T  5932904 c 5932904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 315
Target Start/End: Complemental strand, 26203350 - 26203156
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    |||||||||||||||||||| | ||||| |||| |||||||||||||| ||||| |||||||||        ||||||||| ||||||||||||   |||    
T  26203350 ccatttgattttacttttgtccttaaatgtaaactccttttcaaattattagatacatttattattttttttcctaaacattcccctaattaatcatact 26203251  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    | |||||||||||||| ||||||||| |||||||| ||||||||| |||  ||||||| |||||||||||||| |||| | | ||||||||||||    
T  26203250 aacttgtcttgaaatacgaaaagtcaaatttaatatacatacaaagaaaagacaattttgtaatattaacacataaaatatatacattaattaca 26203156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 38136569 - 38136380
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||||| |||| |||| | | ||||| |||| |||||||||||||||||||| ||||| ||        ||| |||||||||||||||||||| ||||    
T  38136569 ccatttgactttatttttatccataaatgtaaactccttttcaaattactagatacatttttt-----tttcctgaacatacccctaattaatactacta 38136475  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
     |||| ||||||||||||||| ||| ||| | ||||||||||||||||  |||||||  |||||||||||||||||| |||||||||||||||||    
T  38136474 acttgccttgaaatatgaaaaatcaaattaattacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacattaattacac 38136380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 119 - 381
Target Start/End: Complemental strand, 5536706 - 5536457
Alignment:
Q  119 tacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaatacca 218  Q
    |||||||||||||||| |||||| ||||||| ||||   ||||||||||||||||||||||||||||       |||||||||||||||||||||||  |    
T  5536706 tacccatttgattttatttttgtccctaaatgtaaacctcttttcaaattactagatgcatttattatttttctcctaaacatacccctaattaatataa 5536607  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
                  |||||||||| ||| ||||||||||||||||||||||  | ||||||||| ||||||||| ||||||||||||||||||||||| |    
T  5536606 t-------------aatatgaaaaatcaaatttaatacacatacaaacaaatgaaaatttcgtagtattaacacgcaaaacagacacattaattacactg 5536520  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||        |||||||||||||||||| |||| || |||||||  | | |||||||||||    
T  5536519 acaatttttcttaagaaatgtgaaaaaggctatgggtgcctacattttgtgccggagggagta 5536457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 311
Target Start/End: Original strand, 39196917 - 39197110
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc-ctaaacatacccctaattaatacca 218  Q
    |||||||||| |||| |||||| ||||||| ||||||  |||||||||||||||||||||||||||         ||||| |||| |||||||||||  |    
T  39196917 acccatttgactttatttttgtccctaaatgtaaattatttttcaaattactagatgcatttattatttttttttctaaatatacacctaattaataata 39197016  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac-agacacattaat 311  Q
    ||| ||||| || |||| |||||||||| ||||||||||||||||||||||  |||||||  ||||||||||||||||||| ||||||||||||    
T  39197017 ctaacttgttttaaaatttgaaaagtcaaatttaatacacatacaaacaaaagacaatttgataatattaacacacaaaacaagacacattaat 39197110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 123 - 319
Target Start/End: Original strand, 44812494 - 44812690
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| | ||| |  |||| |||||| ||| || || ||||||||||||       |||||| ||||||||||||||||| |||||    
T  44812494 catttgattttatttttgtccataattgaaaatccctttttaaagtattatatgcatttattatttttttcctaaagatacccctaattaatactactat 44812593  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
     |||| |||||||||||||||||| |||||||||||| ||||| |||  ||||||| |||||||||||| | |||||| | ||||||||||||||||    
T  44812594 tttgttttgaaatatgaaaagtcaaatttaatacacacacaaataaatgacaattttgtaatattaacatataaaacaaatacattaattacaccga 44812690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 120 - 316
Target Start/End: Original strand, 10602094 - 10602286
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||| | |||| |||||| | ||||| |||| ||||||| ||||||||||||||||| ||||       ||||||||||| | |||||||||| ||    
T  10602094 acccattttactttatttttgtccataaatgtaaactcctttttaaattactagatgcattcattatttttttcctaaacatactcttaattaatactac 10602193  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||  |||| |||||||||||||||||| |||||||||    |||||||||  ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  10602194 taatttgttttgaaatatgaaaagtcaaatttaatac----acaaacaaaagacaatttagtaatattaacacacaaaatagacaaattaattacac 10602286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 29585090 - 29584919
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    ||||||||||| || |||| ||||||||||||||||||||||        ||||| ||||   |||||||||| | || |||||||| |||||| |||||    
T  29585090 ctaaatataaactcatttttaaattactagatgcatttattattatttttctaaa-atacttttaattaatactattaacttgtcttaaaatataaaaag 29584992  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||| ||||||||||||||||||||||  ||||||| |||||||||||||||| || |||||||||||||||||    
T  29584991 tcaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacagaatagacacattaattacac 29584919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 123 - 298
Target Start/End: Complemental strand, 31840313 - 31840139
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| |||||| ||||||||||||  ||||||||||||| ||||||||||||| |       | |||||||| ||||||||||||| | ||     
T  31840313 catttgactttatttttgtccctaaatataaaccccttttcaaattattagatgcatttatcatatttttc-taaacatatccctaattaatactattaa 31840215  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
      ||||||||||||| ||||| || ||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  31840214 tctgtcttgaaatataaaaagacaaatttaatacacatacaaacaaatgacaatttggtaatattaacacacaaaa 31840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 316
Target Start/End: Original strand, 20185615 - 20185736
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    ||||||||||| |||||||||| ||||  ||||||||||||||||||||||| |||||||||| |||||||||||   |||||| |||||||||||||||    
T  20185615 taaacatacccttaattaatactactaatttgtcttgaaatatgaaaagtcaaatttaatacaaatacaaacaaaaggcaatttggtaatattaacacac 20185714  T
Q  295 aaaacagacacattaattacac 316  Q
    |||||   ||||||||||||||    
T  20185715 aaaacttgcacattaattacac 20185736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 41919997 - 41920114
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||| | ||||||||||||||  ||||||| |||||||||||||||    
T  41919997 taaacatacccctaattaatactactaacttatcttgaaatatgaaaagtcaaatttatttcacatacaaacaaaagacaatttggtaatattaacacac 41920096  T
Q  295 aaaacagacacattaatt 312  Q
    |||| ||| | |||||||    
T  41920097 aaaatagaaatattaatt 41920114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 7002385 - 7002212
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| ||||||||||||   ||||||||||||||||||| ||||||||       ||||||||||||| ||||||||||  ||| ||| |||||||||||    
T  7002385 ttgtccctaaatataaacctcttttcaaattactagatgtatttattatttttt-cctaaacatacccttaattaatactgctaacttatcttgaaatat 7002287  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||| ||| |||||| |||||||||||||||| | ||||| |||||||||||||| |||| | | |||||||||    
T  7002286 gaaaaatcaaatttaacacacatacaaacaaaggataatttggtaatattaacacataaaatataaacattaatt 7002212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 14602572 - 14602735
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnnc--ctaaacatacccctaattaata--ccactatcttgtcttgaaatatgaaaagtcagattta 252  Q
    |||||||||||||||||||||||||||||          ||||||||||||||||||||||  | |||| ||| |||| |||||| |||||||| |||||    
T  14602572 ccttttcaaattactagatgcatttattatatattttttctaaacatacccctaattaatatactactaacttatcttaaaatataaaaagtcaaattta 14602671  T
Q  253 atacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||||||  ||||||| |||||||||||||| |||  |||||||||||||||||    
T  14602672 atacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacac 14602735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 13096462 - 13096622
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaata 255  Q
    ||||||||||||||||||| |||||||||        ||||||||||||| |||||||||| | || |||||||| ||||||||||||| |  ||| ||     
T  13096462 ccttttcaaattactagatacatttattattatttttcctaaacatacccttaattaatactagtaacttgtcttaaaatatgaaaagttaatttttatg 13096561  T
Q  256 cacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||||    
T  13096562 cacatagaaacaaatgacaatttggtaatattaacacacaacacagacacattaattacac 13096622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 298
Target Start/End: Complemental strand, 21171969 - 21171767
Alignment:
Q  95 actcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncc 194  Q
    |||| ||||| |||| |||||||  ||| ||||||||||| || |||  |||||| |||| | ||||||||||||||| || |||||||||       |     
T  21171969 actccctccgtccctatatgtaaccacctatttgattttatttatgtctctaaatgtaaacttcttttcaaattactatatacatttattatttttttc- 21171871  T
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||||||||||||| |||  | |||||  |||||||||| |||    
T  21171870 taaacatacccctaattaatactactaacttatcttgaaatatgtaaagtcaaatttaatacacatacaaataaaagataatttgataatattaacccac 21171771  T
Q  295 aaaa 298  Q
    ||||    
T  21171770 aaaa 21171767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 312
Target Start/End: Original strand, 56373269 - 56373420
Alignment:
Q  160 tttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacaca 259  Q
    |||||||||||| |||||||||||||       ||||||| ||||| |||||||||| | || ||||||||||||||||||||  || ||||||||||||    
T  56373269 tttcaaattactggatgcatttattatttttt-cctaaacgtacccttaattaatactaataacttgtcttgaaatatgaaaaaacaaatttaatacaca 56373367  T
Q  260 tacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     |||||||||  ||||||| ||||||||||||||||||| | |||||||||||    
T  56373368 gacaaacaaatgacaatttggtaatattaacacacaaaataaacacattaatt 56373420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 37175013 - 37175102
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||||||||  ||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||||||    
T  37175013 tcttgaaatatgaaaagtctaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaattacac 37175102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 122 - 313
Target Start/End: Complemental strand, 20293967 - 20293775
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||| ||| ||||| | || || ||||||||||| |||||||||||||||        ||||||||||||| || ||||||| |||    
T  20293967 ccatttgattttattttttttcataaatgtgaactcattttcaaattattagatgcatttattattttttttcctaaacatacccttacttaatactact 20293868  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    | ||||| |||||||||||| ||||| |||||||||| |||||||||||  ||||||  ||||||||| || | |||| | ||||||||||||    
T  20293867 aacttgtattgaaatatgaatagtcaaatttaatacaaatacaaacaaaagacaattcagtaatattagcataaaaaatatacacattaatta 20293775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 92 - 312
Target Start/End: Complemental strand, 31486737 - 31486517
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    ||||||| ||||| |||| ||| |||| ||  |||||| |||| ||||||   ||||| ||||  |||||||||||||||| || |||||||||          
T  31486737 aatactccctccggccctatatctaaacacatatttgactttatttttgtctttaaatgtaaaccccttttcaaattactaaattcatttattattattt 31486638  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||||||| |  |||||||||  || | |||| |||||||||| |||| ||| ||||||||| |||| |||||||| | ||||| ||||||||||||    
T  31486637 tcctaaacatatctttaattaatattaccaacttgccttgaaatataaaaaatcaaatttaatacgcatataaacaaaggataatttagtaatattaaca 31486538  T
Q  292 cacaaaacagacacattaatt 312  Q
    ||||||| |||||||||||||    
T  31486537 cacaaaatagacacattaatt 31486517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 19654648 - 19654453
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||  | ||||||| |||| || ||||||||||| || |||| |||||||        ||||||||||| ||||| |||||| |||    
T  19654648 ccatttgattttattttcatccctaaatgtaaactctttttcaaattattaaatgcgtttattattttttttcctaaacatactcctaactaatactact 19654549  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    | ||||| |||||||||||||||  | |||||||||||||||||| |||  | ||||| ||||||| |||||| |||| |||||||||||||||||    
T  19654548 aacttgttttgaaatatgaaaagataaatttaatacacatacaaataaatgataatttggtaatatcaacacataaaatagacacattaattacac 19654453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 56217010 - 56217108
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||| |||||    
T  56217010 cctaaacatacctctaattaatactactatcttatcttgaaatatgaaaagttaaatttaatacaaatacaaacaaaggacaatatcgtaatactaaca 56217108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 31937383 - 31937471
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||||||||||||||||||| |||| ||| |||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||    
T  31937383 tcttgaaatatgaaaagtcaaattttatatacatacaaacaaatgacaatttaataatattaacacacaaaacagacacattaattaca 31937471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 52768852 - 52768972
Alignment:
Q  193 cctaaacatacccctaattaatac----cactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatta 288  Q
    ||||||||||||||||||||||||     |||||||| ||||||||| || ||||||| |||||||||||||||||| |||  ||||||| ||||||||     
T  52768852 cctaaacatacccctaattaatactacatactatcttctcttgaaatctgtaaagtcaaatttaatacacatacaaataaatgacaattttgtaatattc 52768951  T
Q  289 acacacaaaacagacacatta 309  Q
    |||||||||| ||||||||||    
T  52768952 acacacaaaatagacacatta 52768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 123 - 278
Target Start/End: Complemental strand, 31917593 - 31917440
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||| | | ||||| ||||  | ||||||||||||||||||||||||| |       ||||||||||||| |||||||||| |||||    
T  31917593 catttgattttatttttatccttaaatgtaaaccctttttcaaattactagatgcatttatgatttttt-cctaaacataccc-taattaatactactat 31917496  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    ||| |||| |||||| |||||||| ||||||||||||||||||||||  |||||||    
T  31917495 cttatcttaaaatataaaaagtcaaatttaatacacatacaaacaaaacacaattt 31917440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 45628062 - 45628154
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||  |||||| |||||||||| ||||||||||||||||| ||||||||    
T  45628062 cttgtcttgaaatatgaaaagtcaaatttaatacacata-aaataaagggcaatttggtaatattaatacacaaaacagacacatcaattacac 45628154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 228 - 316
Target Start/End: Original strand, 28116497 - 28116585
Alignment:
Q  228 cttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | ||||| | ||||||||||||||||| ||||| |||||||||||    
T  28116497 cttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgataatttggcaatattaacacacaaaatagacatattaattacac 28116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 41459724 - 41459617
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||| ||| |||  ||||||| ||||||||||| ||||||   |||    
T  41459724 ccctaattaatactactaacttgtcatgaaatatgaaaagtcaaatttaatacacatataaataaaagacaatttagtaatattaacgcacaaactcgac 41459625  T
Q  304 acattaat 311  Q
    ||||||||    
T  41459624 acattaat 41459617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 322
Target Start/End: Original strand, 3684076 - 3684274
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| |||||| | ||||||||||||  |||| |||||| || ||||||||||||       | |||| ||||  | ||||||||| |||| |    
T  3684076 atttgactttatttttgtccttaaatataaatttatttttaaattattaaatgcatttattatttttttc-taaatatacatccaattaatactactaac 3684174  T
Q  224 ttgtcttgaaatatgaaaa-gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    || |||||||||||||||| || | |||||||| ||||| |||||||  | |||||  ||||||||| |||||||| |||||||||||||||||||||||    
T  3684175 ttatcttgaaatatgaaaacgttaaatttaatatacatataaacaaatgataatttaataatattaatacacaaaatagacacattaattacaccgacaa 3684274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 309
Target Start/End: Original strand, 5416860 - 5416942
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  ||||||| |||||||||||| |||||| ||||||||||    
T  5416860 tcttgaaatattaaaagtcaaatttaatacacatacaaacaaaacacaatttggtaatattaacaaacaaaatagacacatta 5416942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 34643576 - 34643438
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    ||||||||||||||||||||||||||        |  |||||||||| |||||||||| ||||  || |||||||||||||||| | | |||||||||||    
T  34643576 ttttcaaattactagatgcatttatttttttcttctaaaacatacccttaattaatactactaatttatcttgaaatatgaaaaattaaatttaatacac 34643477  T
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||||||| |||||||  ||||||||||| ||||||    
T  34643476 atacaaacaaag-acaatttattaatattaacatacaaaa 34643438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 145 - 312
Target Start/End: Original strand, 10541167 - 10541333
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||| || |||| |||||| ||||| |||||||||       |||||||||| ||||||||||||| |||| | | |||||| |||| ||||||    
T  10541167 taaatataaactcatttttaaattattagattcatttattatttttt-cctaaacatatccctaattaatactactaacatatcttgacatataaaaagt 10541265  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || |||||||||||||  |||||||| | ||||| |||||||||| |||||||| | | |||||||||    
T  10541266 caaatttaatacacatttaaacaaaggataatttggtaatattaatacacaaaatatatacattaatt 10541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 120 - 313
Target Start/End: Complemental strand, 52676242 - 52676048
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||| | |||| || |||||| ||||  |||||| ||||||  ||||||||||||||        |||| |||| || |||||||||| |     
T  52676242 acccatttgatttgatttttttttctaaatgtaaacccctttttaaattataagatgcatttattattttttttctaagcatatccttaattaatactat 52676143  T
Q  220 tatcttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    || |||||||| ||||| |||||||||| |||||||||||||| ||| |||| |||||||  ||||||||| ||| |||| ||||| ||||||||    
T  52676142 taacttgtctttgaaatttgaaaagtcaaatttaatacacatataaataaaggacaatttaataatattaatacaaaaaatagacatattaatta 52676048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 20016717 - 20016560
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||||   |||||||||||||||||| |||||||||       | |||||||||   |||||||| | |||| |||||||||||||||| ||| |    
T  20016717 taaatataaacctcttttcaaattactagattcatttattatttttttcataaacatacttttaattaatgctactaacttgtcttgaaatatgtaaact 20016618  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagaca 304  Q
    || ||||||||||  ||||||||||| | ||||| |||||||||||| |||||| |||||    
T  20016617 caaatttaataca--tacaaacaaaggaaaatttggtaatattaacatacaaaatagaca 20016560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 26186743 - 26186817
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||  |||||||  ||||||||||||||||||    
T  26186743 ttgtcttgaaatataaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaa 26186817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 21121115 - 21121039
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    ||||||| |||||||||||||||| |||| |||||||| |||||| |||||| | ||||||||| ||||||||||||    
T  21121115 cctaaacgtacccctaattaatactactaacttgtcttaaaatataaaaagttaaatttaatacgcatacaaacaaa 21121039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 20540111 - 20540029
Alignment:
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaa 283  Q
    |||||| |||||||||| | || ||||| || |||||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  20540111 atacccttaattaatactagtaacttgtattaaaatatgaaa-gtcaaatttaatacacatacaaacaaagaacaatttggtaa 20540029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 20792232 - 20792116
Alignment:
Q  100 ctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaac 199  Q
    ||||| |||| ||| |||| ||||||||||||||| ||||| |||||||| |||||  ||||| |||||||||||| |||||||||       |||||||    
T  20792232 ctccgtccctatatctaaacacccatttgattttatttttgatcctaaatgtaaatctctttttaaattactagatacatttattatttttttcctaaac 20792133  T
Q  200 atacccctaattaatac 216  Q
    ||||| |||| ||||||    
T  20792132 atacctctaactaatac 20792116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 30049814 - 30049760
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  30049814 ttgtcttgaaatatgaaaagtcaactttaatacacatactaacaaagaacaattt 30049760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 312
Target Start/End: Complemental strand, 32108041 - 32107874
Alignment:
Q  146 aaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||||| ||||| |||||||||||  |||||||||        || ||||||| || | |||||||  ||||  || |||| |||||||||||||    
T  32108041 aaatataaatttctttttaaattactagacacatttattattatttttcttaaacatatcctttattaatattactaatttatcttaaaatatgaaaagt 32107942  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || |||||||||| ||||||| |||  |||||||  ||||||||| |||||||||| | |||||||||    
T  32107941 caaatttaatacatatacaaataaaagacaatttgataatattaatacacaaaacatatacattaatt 32107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 323
Target Start/End: Original strand, 54701181 - 54701374
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccact 220  Q
    ||||||| |||| |||||| | ||||| ||||   |||||||||||||||||| |||||||||         ||||||||||||| ||||||      ||    
T  54701181 catttgactttatttttgtccataaatgtaaacctcttttcaaattactagatacatttattattattttttcctaaacatacccttaatta------ct 54701274  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | ||| |||||||||||||||||| | |||||||||||||||||| |||  ||||||   | ||| |||||||| ||||| ||| ||||||||||| |||    
T  54701275 aacttatcttgaaatatgaaaagttaaatttaatacacatacaaataaatgacaatt---tgataataacacactaaacaaacatattaattacactgac 54701371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 20792040 - 20791956
Alignment:
Q  228 cttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||||||||| ||| |||||||||| ||||||| |||  | ||||  ||||||||||||||||||| ||||| |||||||    
T  20792040 cttgaaatatgaaaactcaaatttaatacatatacaaataaaagataattatgtaatattaacacacaaaatagacatattaatt 20791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 48609429 - 48609538
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||| || | |||||||||||||||| ||||||||       | |||| ||||| ||||||||||| |||| || || ||||||||||||||||    
T  48609429 taaatataaactcatattcaaattactagatgtatttattatttttttcttaaatatacctctaattaatactactaactagttttgaaatatgaaaagt 48609528  T
Q  245 cagatttaat 254  Q
    || |||||||    
T  48609529 caaatttaat 48609538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 30866774 - 30866695
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacaga 302  Q
    |||||||||||| || |||||||| | |||||||||||||||||||| ||||||||  ||||| || || ||||||||||    
T  30866774 cttgtcttgaaaaataaaaagtcaaaattaatacacatacaaacaaataacaatttgttaataatagcatacaaaacaga 30866695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 52977704 - 52977585
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||  ||||||||||| |||| ||| | ||||||||| | |||||| ||| | |||||||||||| ||| || | |||  ||||||||||||    
T  52977704 cctaaacatacttctaattaatactactaacttattttgaaatataagaagtcaaattaagtacacatacaaataaaaaatagtttaataatattaacac 52977605  T
Q  293 acaaaacagacacattaatt 312  Q
    | |||| |||||||| ||||    
T  52977604 ataaaatagacacatgaatt 52977585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 3094263 - 3094209
Alignment:
Q  260 tacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattac 314  Q
    ||||||||||  ||||||| ||||||||||||||||||| |||||||||||||||    
T  3094263 tacaaacaaatgacaatttggtaatattaacacacaaaatagacacattaattac 3094209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 31936989 - 31937043
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    |||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  31936989 tttatttttgtccctaaatgtaaatcccttttcaaattactagatgcatttatta 31937043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 36513306 - 36513367
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||  |||||||||||||    
T  36513306 aaatatgaaaaatcaaatttaatacatatacaaacaaaaaacaatttgataatattaacaca 36513367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 726751 - 726675
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaag 270  Q
    ||||| ||||||||||||||||   ||| ||| |||||||||||||||||||| |||||   |||||||||||||||    
T  726751 ctaaatatacccctaattaatattgctaacttatcttgaaatatgaaaagtcaaatttatcccacatacaaacaaag 726675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 754093 - 754169
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaag 270  Q
    ||||| ||||||||||||||||   ||| ||| |||||||||||||||||||| |||||   |||||||||||||||    
T  754093 ctaaatatacccctaattaatattgctaacttatcttgaaatatgaaaagtcaaatttatcccacatacaaacaaag 754169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 381
Target Start/End: Complemental strand, 43800805 - 43800758
Alignment:
Q  334 aaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||    
T  43800805 aaatgtgaaaaaggcaatgggtgcctacgttaagggacggagggagta 43800758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 45079773 - 45079873
Alignment:
Q  197 aacatacccctaattaataccactatcttg-tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacaca 295  Q
    ||||||||| |||||||||| | || |||  ||||||||||||||||| || |||||||  ||||| ||| |||||| |||||  |||||||||||||||    
T  45079773 aacatacccttaattaatactattaactttatcttgaaatatgaaaagccaaatttaat--acatagaaagaaagaataatttgctaatattaacacaca 45079870  T
Q  296 aaa 298  Q
    |||    
T  45079871 aaa 45079873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 3094479 - 3094409
Alignment:
Q  193 cctaaacatacccc-taattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatac 262  Q
    |||||| ||||||| |||||||||| | ||  ||||||||||||||||||||| | |||||||||||||||    
T  3094479 cctaaatataccccgtaattaatactattaagttgtcttgaaatatgaaaagttaaatttaatacacatac 3094409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 18683536 - 18683609
Alignment:
Q  237 tgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||| |||||||||| |  ||||||||| |||| || ||||||||||| ||||||| | |||||||||||    
T  18683536 tgaaaagtcaaatttaatacaaa--caaacaaaggacaagttggtaatattaacgcacaaaataaacacattaatt 18683609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 30050202 - 30050142
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    ||||||||||| |||| ||| ||||| ||||||| |||| ||||||||||||| |||||||    
T  30050202 atttgattttatttttattcttaaatgtaaattcttttttaaattactagatgtatttatt 30050142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 56216673 - 56216713
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  56216673 taaatgtaaatttcttttcaaattactagatgcatttatta 56216713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 26170258 - 26170309
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    |||||||||||||||||||| |||||||||| ||||||| |||  |||||||    
T  26170258 tcttgaaatatgaaaagtcaaatttaatacatatacaaataaatgacaattt 26170309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 31552365 - 31552257
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    ||||||||||| ||||||| |||||| | | ||||||||||         ||||||||||||||||||||||| |||   ||||||| |||||||||||     
T  31552365 ctaaatataaactcctttttaaattattggttgcatttatttttttttttctaaacatacccctaattaatactactcatttgtcttaaaatatgaaaaa 31552266  T
Q  244 tcagattta 252  Q
    ||| |||||    
T  31552265 tcaaattta 31552257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 39813844 - 39813891
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaatta 169  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  39813844 ccatttgattttatttttgtccctaaatgtaaactccttttcaaatta 39813891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 25842021 - 25841983
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaa 265  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  25842021 tcttgaaatatgaaaaatcaaatttaatacacatacaaa 25841983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 31294264 - 31294190
Alignment:
Q  233 aatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacat 307  Q
    |||||||||||||| ||  ||| |||||||||||||| |||||| | |||| ||| |||||||||  ||||||||    
T  31294264 aatatgaaaagtcaaatcaaattcacatacaaacaaataacaatgtagtaaaatttacacacaaactagacacat 31294190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 3113483 - 3113446
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacata 261  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  3113483 ttgttttgaaatatgaaaagtcaaatttaatacacata 3113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 30866836 - 30866789
Alignment:
Q  137 tttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||| |||||||||||| || ||| |||||||||||||||||||||||    
T  30866836 tttgtccctaaatataaactcattt-caaattactagatgcatttatta 30866789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 49545092 - 49544991
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacac 258  Q
    ||||||||||| ||||| | |||||||       ||||||||||| |||||||||||| |||| ||| |||| |||| | |||| | | |||||||||||    
T  49545092 ttttcaaattaatagatacgtttattatttttttcctaaacatactcctaattaatactactaacttatcttaaaatttaaaaaattaaatttaatacac 49544993  T
Q  259 at 260  Q
    ||    
T  49544992 at 49544991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 8e-68; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 157 - 381
Target Start/End: Complemental strand, 5895915 - 5895691
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatac 256  Q
    |||||||||||||||||||||||||||||       |||||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  5895915 ccttttcaaattactagatgcatttattaattttttcctaaatatgcccctaattaataccactatcttgtcttgaaatatgaaaagttaaatttaatac 5895816  T
Q  257 acatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatg 356  Q
    ||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||||||   |||||       |||||||||||||||| |||||||||    
T  5895815 acataaaaataaaggacaatttcgtaatattaatacacaaaacagacacattaattacattaacaacttttcttaagaaatgtgaaaaagacaatggatg 5895716  T
Q  357 gctacattaagggacggagggagta 381  Q
     ||||||||||||||||||||||||    
T  5895715 cctacattaagggacggagggagta 5895691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 94 - 323
Target Start/End: Complemental strand, 1764060 - 1763831
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| ||| |||  || |||||||||||| ||||||  |||||||||||  ||||| ||||||| |||||||||||||||       |    
T  1764060 tactccctccgtccctatatctaagcactcatttgattttatttttgtctctaaatataaacacctttccaaattattagatgcatttattattattttc 1763961  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| |||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1763960 ctaaacatacccttaattaatactactaacttgtcttgaaatttgaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacaca 1763861  T
Q  294 caaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||||||||||| ||||||    
T  1763860 caaaacagacacattaattacactgacaac 1763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 92 - 381
Target Start/End: Complemental strand, 19839180 - 19838891
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    ||||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||          
T  19839180 aatactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattattt 19839081  T
Q  192 ncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
     |||||||||||||||||||||| | ||||  || ||||||||||  |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  19839080 tcctaaacatacccctaattaatcctactaatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaaca 19838981  T
Q  292 cacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    || |||| ||||||||||| |||||  |||||       ||||||||||||||| |||| ||  |  |||||  ||||||||||||||||    
T  19838980 cataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggggattacatatagggacggagggagta 19838891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 131 - 309
Target Start/End: Original strand, 34513115 - 34513292
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtctt 230  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||||||||       | |||||||||||||||||| ||| |||||||||||||    
T  34513115 tttatttttgttcctaaatgtaaactccttttcaaattactagatgcatttattatttttttc-taaacatacccctaattattactactatcttgtctt 34513213  T
Q  231 gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacatta 309  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  34513214 gaaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttcgtaatattaacacacaaaacagacacatta 34513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 94 - 316
Target Start/End: Original strand, 31945771 - 31945993
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| || | |||||||  || |||||||||||| ||||||  |||||| |||| | ||||||||||||||||||||||||||||       |    
T  31945771 tactccctccgtccttatatgtaaccactcatttgattttatttttgtctctaaatgtaaacttcttttcaaattactagatgcatttattatttttttc 31945870  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||| |||||||  ||||||| ||||||||||||||    
T  31945871 ctaaacatatccctaattaatactactaacttgtcttgaaatatgtaaagtcaaatttaatacacatataaacaaacgacaatttggtaatattaacaca 31945970  T
Q  294 caaaacagacacattaattacac 316  Q
    ||||| |||||||||||||||||    
T  31945971 caaaatagacacattaattacac 31945993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 124 - 323
Target Start/End: Original strand, 30465857 - 30466056
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||||| |||| |||||||| ||||| |||| | ||||||||||||||||||||||||||||       ||||||||| ||| |||||||||| |||| |    
T  30465857 atttgactttatttttgttcataaatgtaaacttcttttcaaattactagatgcatttattatttttttcctaaacatccccttaattaatactactaac 30465956  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    || |||||||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  30465957 ttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaagataatttggtaatattaacacacaaaacaaacatattaattacaccgacaac 30466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 160 - 381
Target Start/End: Complemental strand, 9461474 - 9461254
Alignment:
Q  160 tttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacaca 259  Q
    |||||||||| |||||||||||||||        |||||||||||| |||||||| | |||| | |||||||||||||||||||||| ||||||||||||    
T  9461474 tttcaaattattagatgcatttattattttttttctaaacatacccataattaattctactaacctgtcttgaaatatgaaaagtcaaatttaatacaca 9461375  T
Q  260 tacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggct 359  Q
    ||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||       || ||||||||||||| ||||| ||  ||    
T  9461374 tacaaacaaagaataatttagtaatattaacacataaaacaaacacattaattacaccgacaacatttcttaataaatgtgaaaaagacaatgaatttct 9461275  T
Q  360 acattaagggacggagggagta 381  Q
    ||| ||||||||||||||||||    
T  9461274 aca-taagggacggagggagta 9461254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 120 - 379
Target Start/End: Complemental strand, 16186791 - 16186535
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaatacca 218  Q
    |||||||||||||||||||||| | ||||||||||  | ||||||||||||||||||||||||||         ||||||||||| | ||||||||||||    
T  16186791 acccatttgattttacttttgtccttaaatataaaccctttttcaaattactagatgcatttattttattttttcctaaacatacac-taattaatacca 16186693  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||||||      
T  16186692 ctatcttgtcttgaaatatgaaaagtcaaatttaat--acatacaaacaagggacaatttcgtaa-attaacatacaaaacagacacattaattacacta 16186596  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggag 379  Q
    | |||       |  |||||||||||||  ||||| |||||||||||||||| ||||||||    
T  16186595 ataacttttcttacaaaatgtgaaaaagataatgggtggctacattaagggatggagggag 16186535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 131 - 323
Target Start/End: Complemental strand, 16350732 - 16350539
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac-tatcttgtct 229  Q
    |||| ||||||  |||||||||||  |||||||||||||||||||||||||||||       |||||||||||| ||||||||||| |  || |||||||    
T  16350732 tttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacctctaattaatactaaataacttgtct 16350633  T
Q  230 tgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    ||||||||||||||| | |||||||||| |||||||||||  ||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  16350632 tgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagactcattaattacactgacaac 16350539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 93 - 351
Target Start/End: Complemental strand, 11303105 - 11302845
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcattt-attannnnnn 191  Q
    |||||| ||||| |||| ||| |||  ||||||||||||||| |||||| | ||||| |||| | |||||||||| ||||||||| ||| ||||          
T  11303105 atactccctccgtccctatatctaagaacccatttgattttatttttgtccttaaatgtaaacttcttttcaaataactagatgctttttattatttttt 11303006  T
Q  192 ncct-aaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaac 290  Q
      || ||||||||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||| |||||||||||    
T  11303005 ttcttaaacatacccctaattaatactactattttgtcttgaaatgtgaaaagtcaaatttaatacacatgcaaacaaaggacaattttgtaatattaac 11302906  T
Q  291 acacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaat 351  Q
    ||| ||||||||||||||||||| ||  |||||       |||||||||||||||| ||||    
T  11302905 acaaaaaacagacacattaattatactaacaacttttcttaagaaatgtgaaaaagacaat 11302845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 313
Target Start/End: Complemental strand, 16327334 - 16327151
Alignment:
Q  131 tttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac-tatcttgtct 229  Q
    |||| ||||||  |||||||||||  |||||||||||||||||||||||||||||       |||||||||||| ||||||||||| |  || |||||||    
T  16327334 tttatttttgtctctaaatataaaccccttttcaaattactagatgcatttattatatttttcctaaacatacctctaattaatactaaataacttgtct 16327235  T
Q  230 tgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||||||||||||||| | |||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  16327234 tgaaatatgaaaagttaaatttaatacaaatacaaacaaatgacaatttggtaatattaacacacaaaacagacacattaatta 16327151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 120 - 350
Target Start/End: Complemental strand, 6791597 - 6791369
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| ||||||   ||||| ||||  ||||||||| |||||||||||||||||||       ||||||||||| |||| ||||||| |     
T  6791597 acccatttgattttatttttgtctttaaatgtaaaccccttttcaacttactagatgcatttattatttttttcctaaacatactcctagttaatacaat 6791498  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||||||  |||||||  |||||||||||||||||||  ||||||||||||||  ||    
T  6791497 tatcttgtcttgaaatttaaaaagtcaaatttaatacacatacaaacaaatgacaatttaataatattaacacacaaaac--acacattaattacattga 6791400  T
Q  320 caacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
    ||||       ||||||||||||||| ||||    
T  6791399 caactttttttaagaaatgtgaaaaaagcaa 6791369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 145 - 312
Target Start/End: Original strand, 12514489 - 12514662
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnn---cctaaacatacccctaattaatac---cactatcttgtcttgaaatatg 238  Q
    |||||||||| | ||||||||||||||||||||||||||||          |||||||||||||||||||||||    ||||| ||||||||||||||||    
T  12514489 taaatataaacttcttttcaaattactagatgcatttattatttttgttaccctaaacatacccctaattaataatagcactaacttgtcttgaaatatg 12514588  T
Q  239 aaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  12514589 aaaagtcaaatttaatacacatacaaacaaaagacaatttggtaatattaacacacaaaatagacacattaatt 12514662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 120 - 345
Target Start/End: Complemental strand, 15982015 - 15981790
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||| | |||| |||||| ||||||| ||||    |||||||||||||||||||||||||||        | |||||||||  |||||||||| |     
T  15982015 acccatttaactttatttttgtccctaaatgtaaaccttttttcaaattactagatgcatttattatattttttcaaaacatacctataattaatactat 15981916  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccga 319  Q
    || |||||||||||||||||||||| | |||||| |||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||||| |    
T  15981915 taacttgtcttgaaatatgaaaagttaaatttaagacacatacaaactaatgacaatttggtaatattaacacacaaaacagacacattaattacaccaa 15981816  T
Q  320 caacnnnnnnnaagaaatgtgaaaaa 345  Q
    ||||       |||||||||||||||    
T  15981815 caacttttcttaagaaatgtgaaaaa 15981790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 313
Target Start/End: Original strand, 28238224 - 28238392
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatg-aaaag 243  Q
    ||||| ||||| | |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  28238224 taaatgtaaatcctttttcaaattactagatgcatttattatttttt-cctaaacatacccctaattaatactactaacttgtcttgaaatatgaaaaag 28238322  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||| |||||||| ||||| |||||| | | ||| | ||||||||||||||||||| ||||||||||||||    
T  28238323 tcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaatta 28238392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 138 - 312
Target Start/End: Complemental strand, 33607556 - 33607384
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| ||||||||||||  | ||||||||||||||||||||||||||        ||||||||||||||||||||||||  ||| ||| || ||||||||    
T  33607556 ttgtccctaaatataaacactttttcaaattactagatgcatttatt--ttttttcctaaacatacccctaattaatactgctaacttatcatgaaatat 33607459  T
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||| |||||| |||||||||||||||| | |||||  |||||||||||||| ||| |||||||||||||    
T  33607458 gaaaagtcaaatttaacacacatacaaacaaaggataatttgataatattaacacactaaatagacacattaatt 33607384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 316
Target Start/End: Original strand, 22410727 - 22410924
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| ||||| | ||||||||| |  ||||||||||||||       ||||| ||||||| |||||||||| ||    
T  22410727 acccatttgattttatttttgtccctaaatgtaaatcctttttcaaataataagatgcatttattatttttttcctaagcatacccttaattaatactac 22410826  T
Q  220 tatcttgtctt-gaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |   ||||||| | ||| ||||| |||| |||||||||||||||||| |||  ||||||| |||||||||||| | ||||||||||||||||||||||    
T  22410827 ttatttgtctttgtaatttgaaaggtcaaatttaatacacatacaaataaaagacaatttggtaatattaacataaaaaacagacacattaattacac 22410924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 310
Target Start/End: Original strand, 3887866 - 3888017
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatg-aaaagtcagatttaataca 257  Q
    ||||||||||| |||||||||||||||       |||||||||||||||||||||||| |||| |||||||||||||||| |||| ||| ||||||||||    
T  3887866 ttttcaaattattagatgcatttattatttttttcctaaacatacccctaattaatactactaacttgtcttgaaatatgaaaaaatcaaatttaataca 3887965  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||  ||||| |  ||||||| ||||||||||||||||||| |||||||||||    
T  3887966 catgtaaacataagacaattt-gtaatattaacacacaaaatagacacattaa 3888017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 144 - 312
Target Start/End: Complemental strand, 31780323 - 31780153
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    ||||||||||| ||| ||||||||||||||||  ||||||||        ||||||||||||||| |||||||| | || |||||||||||| |||||||    
T  31780323 ctaaatataaactccatttcaaattactagatagatttattattattattcctaaacataccccttattaatactattaacttgtcttgaaaaatgaaaa 31780224  T
Q  243 -gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     || | |||||||||||| |||||||||| ||||||| ||||||| |||| |||||| |||||||||||||    
T  31780223 agtgaaatttaatacacaaacaaacaaaggacaatttagtaatatcaacatacaaaatagacacattaatt 31780153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 144 - 312
Target Start/End: Complemental strand, 5457382 - 5457216
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    |||||||||||| | ||||||||||| ||||||||||||||        |||||||||||| ||||||||||| |||| ||||| ||||||| | ||||     
T  5457382 ctaaatataaatccattttcaaattattagatgcatttatt--ttttcccctaaacatacctctaattaatactactaacttgttttgaaatttaaaaaa 5457285  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||| ||||||||||  |||||||||||||||||||  ||||||||||  | |||||||| |||||||||    
T  5457284 tcaaatttaatacatttacaaacaaagaacaatttgataatattaacgtataaaacagatacattaatt 5457216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 10669268 - 10669351
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  10669268 ttgaaatatgaaaagtcaaatttaatacagatacaatcaaagaacaatttggtaatattaacacacaaaatagacacattaatt 10669351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 30249082 - 30248946
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    |||||||||| |||| |||||| ||||||| ||||    ||||||||||||||||| |||||||||       |||||||||||||||||||||||| ||    
T  30249082 acccatttgactttatttttgtccctaaatgtaaacctattttcaaattactagatccatttattatttttt-cctaaacatacccctaattaatactac 30248984  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    || |||||||||||||||||||||||| ||||||||||    
T  30248983 taacttgtcttgaaatatgaaaagtcaaatttaataca 30248946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 248 - 322
Target Start/End: Complemental strand, 3729482 - 3729408
Alignment:
Q  248 atttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||    
T  3729482 atttaatacacatacaaacaaagaacaatttggtaatattaacacacaaaatagacacattaattacaccaacaa 3729408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 316
Target Start/End: Complemental strand, 31536234 - 31536037
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaatacca 218  Q
    |||||||||||||||  |||||  || ||| ||||  ||||||||||||||||| |||||||||||        |||| |||||||  |||||||||| |    
T  31536234 acccatttgattttatatttgtcactgaatgtaaaccccttttcaaattactagttgcatttattattttttttcctatacatacctataattaatacta 31536135  T
Q  219 ctatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||| ||| |||||||||||||||||||| |||||||||||||| |||||||  | |||||  ||||||||||| | |||| ||| | |||||||||||    
T  31536134 ctaacttatcttgaaatatgaaaagtcaaatttaatacacatataaacaaaagataatttgataatattaacaaataaaatagatatattaattacac 31536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 31152953 - 31153066
Alignment:
Q  200 atacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaac 299  Q
    ||||| ||||||||||  | || ||||| || ||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| | ||||     
T  31152953 atacctctaattaatattattaacttgttttaaaatatgaaaagtcaaatttaatacacatacaaacaaataacaatttagtaatattgacatataaaat 31153052  T
Q  300 agacacattaatta 313  Q
    ||||||||||||||    
T  31153053 agacacattaatta 31153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 123 - 313
Target Start/End: Original strand, 197337 - 197529
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccact 220  Q
    ||||||| |||| |||||| | ||||| |||| | ||||| |||||||||||||| |||||||         | |||| ||||| ||||||||||| |||    
T  197337 catttgactttatttttgtccttaaatgtaaacttctttttaaattactagatgcctttattatttatttttcttaaatatacctctaattaatactact 197436  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    | |||||||| ||||   |||| | | ||||||||||||||||||||||  |||||||  ||||||| |||||||||||| ||||||||||||    
T  197437 aacttgtcttaaaattgaaaaaattaaatttaatacacatacaaacaaatgacaatttaataatattgacacacaaaacaaacacattaatta 197529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 4250690 - 4250804
Alignment:
Q  267 aaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaa 366  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||        ||||||||| |||||| ||||  ||  |||||||||    
T  4250690 aaaggacaacttcgtaatattaacacacaaaacagacacattaattacactgacaatttttcttaagaaatgtaaaaaagacaataaatacctacattaa 4250789  T
Q  367 gggacggagggagta 381  Q
    ||||| |||||||||    
T  4250790 gggacagagggagta 4250804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 246
Target Start/End: Original strand, 10260483 - 10260615
Alignment:
Q  115 taaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta--nnnnnnncctaaacatacccctaatta 212  Q
    |||| ||||||||||||||| |||||||  ||||| ||||||  |||||||||||||||||||||||| ||         ||||| ||||||||||||||    
T  10260483 taaacacccatttgattttatttttgtttttaaatgtaaattttttttcaaattactagatgcatttactatttttttttcctaagcatacccctaatta 10260582  T
Q  213 ataccactatcttgtcttgaaatatgaaaagtca 246  Q
    ||| | ||| ||||||||||||||||||||||||    
T  10260583 ata-ctctaacttgtcttgaaatatgaaaagtca 10260615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 3729569 - 3729485
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    |||||||||| |||||||||||  |||| |||||||||||||||| ||||| | ||||||||||||||||||||||  |||||||    
T  3729569 ctaaacatactcctaattaatattactaacttgtcttgaaatatgtaaagttaaatttaatacacatacaaacaaatgacaattt 3729485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 12503518 - 12503656
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaatacca---ctatcttgtcttgaaatatga 239  Q
    |||||||||| | |||||||||||||| |||||||| ||||         |||||||||||||||||||||||  |   ||| |||||||||||||||||    
T  12503518 taaatataaacttcttttcaaattactggatgcattaattatttttttaccctaaacatacccctaattaataatagtactaacttgtcttgaaatatga 12503617  T
Q  240 aaagtcagatttaatacacatacaaacaaagaacaattt 278  Q
    ||||||| ||||| ||||||||||||||||  |||||||    
T  12503618 aaagtcaaatttactacacatacaaacaaaagacaattt 12503656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 31039293 - 31039218
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    ||||| ||||||||||| ||||| |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  31039293 ctaaagatacccctaatcaatactactaacttgtcttgaaatatgaaaagtcaaattaaatgcacatacaaacaaa 31039218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 313
Target Start/End: Original strand, 5084530 - 5084615
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||| |||||||  |||||||||||||||||||| ||||||| ||||    
T  5084530 tcttgaaatataaaaagtcaacttta-tacacatacaaacaaaggacaatttgataatattaacacacaaaacaaacacatttatta 5084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 20523090 - 20523016
Alignment:
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaa 297  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||  || ||||| |||||||| |||||||||    
T  20523090 cttgtcttgaaatatgaaaaatcaaatttaatacacatacaaacaagaaataatttggtaatattgacacacaaa 20523016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 9941169 - 9941048
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||  |||||||||| | || |||||||| ||||||||||||||| ||| ||||||| | ||||||||||||| ||| |||| ||| | |||    
T  9941169 ctaaacatacctttaattaatactattaacttgtctttaaatatgaaaagtcaaattaaatacacttgcaaacaaagaacagtttagtaaaattcaaaca 9941070  T
Q  294 caaaacagacacattaattaca 315  Q
    ||||  ||| ||||||| ||||    
T  9941069 caaattagatacattaactaca 9941048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 12514747 - 12514832
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||| |||||||||| |||| |||||||||||||| |||||||  | ||||| |||||||||||| ||||||  ||||||||||||    
T  12514747 tcttcaaatatgaaaggtcatatttaatacacatataaacaaatgataatttggtaatattaacatacaaaatggacacattaatt 12514832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 313
Target Start/End: Complemental strand, 9428279 - 9428195
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    |||||||||||||||| | ||| |||| |||||||||||||  | |||||  |||||||||||||||||| ||| ||||||||||    
T  9428279 ttgaaatatgaaaagtaaaattcaatatacatacaaacaaatgataatttgataatattaacacacaaaatagatacattaatta 9428195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 31486972 - 31487107
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat---cttgtcttgaaatatgaaa 241  Q
    ||||| ||||| | |||| |||||||||||| |||||||||       ||||||||||| |||| ||||||  | |||   ||| |||||||||||||||    
T  31486972 taaatgtaaatccttttttaaattactagatacatttattatttctttcctaaacatactcctagttaatat-attatttacttatcttgaaatatgaaa 31487070  T
Q  242 agtcagatttaatacacatacaaacaaagaacaattt 278  Q
    ||||| | ||||||||||||||||||||  |||||||    
T  31487071 agtcaaacttaatacacatacaaacaaaagacaattt 31487107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 6419016 - 6418956
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatt 287  Q
    |||||||||||||||||||| || ||||||| |||||||||||||| |||||  |||||||    
T  6419016 tcttgaaatatgaaaagtcaaatgtaatacaaatacaaacaaagaaaaatttgataatatt 6418956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 312
Target Start/End: Complemental strand, 7365682 - 7365517
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||||||| ||| ||||||||||| |||||  ||||||||       | ||||||| |||||||||||||| | || ||| | |||||||||||||| |    
T  7365682 taaatataagttcattttcaaattattagatatatttattattttcttcataaacat-cccctaattaatactattaacttattttgaaatatgaaaaat 7365584  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    || || ||||||| ||||||| |||  | ||||| |||||||  | |||||||| ||| |||||||||    
T  7365583 caaatataatacaaatacaaataaatgataatttagtaatatgcaaacacaaaataga-acattaatt 7365517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 8644755 - 8644827
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaaca 267  Q
    |||||||||||||||||||||| ||||  ||||||| ||||  ||||| ||| ||||| |||| |||||||||    
T  8644755 taaacatacccctaattaatactactaaattgtcttaaaatgagaaaattcaaatttagtacaaatacaaaca 8644827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 30248645 - 30248593
Alignment:
Q  259 atacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaat 311  Q
    |||||||||||   |||||| ||||||||||||||||||||| ||||||||||    
T  30248645 atacaaacaaatgccaatttggtaatattaacacacaaaacaaacacattaat 30248593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 11082199 - 11082152
Alignment:
Q  213 ataccactatcttgtcttgaaatatgaaaagtcagatttaatacacat 260  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||||    
T  11082199 atactactaacttgtcttgaaatatgaaaattcaaatttaatacacat 11082152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 7595583 - 7595616
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||||||||||||||||| ||||||||||    
T  7595583 ttgtcttgaaatatgaaaagtcaaatttaataca 7595616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 10669198 - 10669239
Alignment:
Q  143 cctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    |||||||||||||  |||||||||||||||||||||| ||||    
T  10669198 cctaaatataaatctcttttcaaattactagatgcatatatt 10669239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 12503397 - 12503438
Alignment:
Q  139 tgttcctaaatataaattccttttcaaattactagatgcatt 180  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  12503397 tgttcctaaatataaactcattttcaaattactaaatgcatt 12503438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 12514368 - 12514409
Alignment:
Q  139 tgttcctaaatataaattccttttcaaattactagatgcatt 180  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  12514368 tgttcctaaatataaactcattttcaaattactaaatgcatt 12514409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 1514233 - 1514305
Alignment:
Q  240 aaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||| |||||||||||||| ||||||   | ||||| |||||||||||| |||||| | ||| |||||||    
T  1514233 aaagtcaaatttaatacacatataaacaattgataatttggtaatattaacatacaaaataaacatattaatt 1514305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 93 - 381
Target Start/End: Original strand, 39690342 - 39690630
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| |||| |||||||  ||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||           
T  39690342 atactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttattattatttt 39690441  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||| | ||||  |||||||||||||  |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  39690442 cctaaacatacccctaattaatcctactaatttgtcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggacaatttagtaatattaacac 39690541  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    | |||| ||||||||||| |||||  |||||       ||||||||||||||| |||| ||  || |||||  ||||||||||||||||    
T  39690542 ataaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagta 39690630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 122 - 381
Target Start/End: Complemental strand, 36177512 - 36177252
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| ||||||||        ||||||||||||| |||||||||| |||    
T  36177512 ccatttgattttatttttgtccctaaatgtaaattcattttcaaattactagatgtatttattattttttttcctaaacatacccttaattaatactact 36177413  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
     | |||| |||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||| ||     
T  36177412 tttttgttttgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaattttgtaatattaacacacaaaatagacacattaattacactgat 36177313  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||       ||||||||| |||||| |||| |||| ||||||||||||| ||||||||||    
T  36177312 aacttttcttaagaaatgtaaaaaagacaatagatgcctacattaagggatggagggagta 36177252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 125 - 381
Target Start/End: Original strand, 3247160 - 3247418
Alignment:
Q  125 tttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccactat 222  Q
    |||||||||| |||| | || |||||||||| ||||||||||||| || ||||||||||||         |||||| ||||||||||||||||| || ||    
T  3247160 tttgattttatttttatccccaaatataaatcccttttcaaattattatatgcatttattattttttttccctaaatatacccctaattaatactacaat 3247259  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||| | |||    
T  3247260 cttttcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaacatacaaaacagacatattaattacactgtcaa 3247359  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       ||||||||||||||||||||||| |  |||| |||||| ||||||||||||    
T  3247360 cttttcttaagaaatgtgaaaaaggcaatgggtatctacgttaaggaacggagggagta 3247418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 93 - 381
Target Start/End: Complemental strand, 34877914 - 34877626
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||||| | || ||| |||||  ||||||||||||| |||||| | ||||| ||||| || ||| |||||| || ||||||||||||           
T  34877914 atactccctccgtctctatatataaatctccatttgattttatttttgtccataaatgtaaatccccttttaaattattatatgcatttattattttatt 34877815  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||| |||| |||||||||||| || | |||||||||||| ||||||||||| |||||||||||| |||||||||  | ||||| |||||||||||||    
T  34877814 cctaaatatactcctaattaatactacaaacttgtcttgaaaaatgaaaagtcaaatttaatacacacacaaacaaatgataatttggtaatattaacac 34877715  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||||||| ||||||||||| ||||||       |||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  34877714 acaaaacagacaaattaattacactgacaacatttcttaagaaatgtgaaaaaggcaatgaatgtctacattaaaggacggagggagta 34877626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 122 - 376
Target Start/End: Original strand, 3631003 - 3631257
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||| ||| ||||| |||| || |||||||||||||||||| ||||||||       |||||||||||||||||||||||| || |    
T  3631003 ccatttgattttatttttattcttaaatgtaaactctttttcaaattactagatgtatttattatttttt-cctaaacatacccctaattaatactacca 3631101  T
Q  222 tcttgtcttgaaatat---gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccg 318  Q
    | ||||||||||||||   ||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  3631102 ttttgtcttgaaatattatgaaaagtcaaatttaatacacatacaaacaaaggtcaattgcgtaatattaacacacaaaaccgacacattaattaca-cg 3631200  T
Q  319 acaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagg 376  Q
    ||||        |||||||||||||||| ||||||||| |||||||||||||||||||    
T  3631201 acaa-tttttttaagaaatgtgaaaaagacaatggatgcctacattaagggacggagg 3631257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 123 - 381
Target Start/End: Complemental strand, 5845394 - 5845136
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    ||||||| |||| ||||||| |||||| ||||| |  |||||||||| |||||||||||||||       ||||||||||| |||||||||||| ||||     
T  5845394 catttgactttatttttgtttctaaatgtaaatcctctttcaaattattagatgcatttattaattttttcctaaacatactcctaattaatactactaa 5845295  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||  ||||||||| |||||||||| | ||||||||||||| |||||    
T  5845294 cttgtattgaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttgataatattaatacacaaaacaaatacattaattacactgacaa 5845195  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |       ||||||| |||||||||||||||||| |||||| ||| |||||||| ||||    
T  5845194 caattcttaagaaatatgaaaaaggcaatggatgcctacatcaagagacggaggaagta 5845136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 4738849 - 4738590
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||| ||| |||| |||||| ||||||| |||| ||  ||| ||||||||||||||||||||||       ||||||||||||||||| |||||| |||    
T  4738849 cccatctgagtttatttttgtccctaaatgtaaactctcttttaaattactagatgcatttattaattttt-cctaaacatacccctaactaatactact 4738751  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    | |||||||||||||||||||||||| |||||||||||||| ||||||||  |||||| ||||||||||||||||||||| | ||||||||||||| |||    
T  4738750 aacttgtcttgaaatatgaaaagtcaaatttaatacacataaaaacaaaggtcaatttagtaatattaacacacaaaacaaatacattaattacactgac 4738651  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||        |||||||||||||||| |||||||||  | |||||||||| ||||||||||    
T  4738650 aatatttcttaagaaatgtgaaaaagacaatggatgcatgcattaagggatggagggagta 4738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 90 - 381
Target Start/End: Original strand, 25017524 - 25017818
Alignment:
Q  90 taaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaatta---ctagatgcatttattan 186  Q
    ||||||||| ||||| |||| ||| |||  |  ||||||| |||| |||||| | ||||| ||||  || ||||||||||   ||| ||||||||||||     
T  25017524 taaatactctctccgtccctatatctaagcattcatttgactttatttttgtccttaaatgtaaaccccctttcaaattattactatatgcatttattat 25017623  T
Q  187 nnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatat 286  Q
          |||||| ||||||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||    
T  25017624 ttttttcctaaatatacccctaattaatactattaacttgtcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttggtaatat 25017723  T
Q  287 taacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||||||||| || ||||||       |||||| ||||||||| |||||  || ||||||||||||||||||||||||    
T  25017724 taacacacaaaacagacacattaattatactgacaacatttcttaagaaacgtgaaaaagacaatgagtgtctacattaagggacggagggagta 25017818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 124 - 322
Target Start/End: Original strand, 3558914 - 3559112
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    |||| |||||| |||||| |||||||||||    ||||||||||||||||||||||||||||       ||||||||||||| |||| ||||| |||| |    
T  3558914 attttattttatttttgtccctaaatataaccctcttttcaaattactagatgcatttattatttttttcctaaacatacccttaataaatactactaac 3559013  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    || |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| ||||    
T  3559014 ttatcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttggtaatattaacacacaaaatagacacattaattataccaacaa 3559112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 122 - 368
Target Start/End: Original strand, 9946242 - 9946489
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||||| ||||||| ||| |  |||||||||||| |||||||||||||||        |||||||||||||||||||||||| |||    
T  9946242 ccatttgattttatttttgtccctaaatgtaattctcttttcaaattattagatgcatttattattttttttcctaaacatacccctaattaatactact 9946341  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgac 320  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||||||||| | |||||||||||||||| ||  ||||||||||||||||||| | ||||    
T  9946342 atcttgtcttgaaatataaaaagtcgaatttaatacacgtacaaacaaaggataatttcgtaatattaatacgtaaaacagacacattaattatatcgac 9946441  T
Q  321 aacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagg 368  Q
    |||       || ||||||||||||| ||||| ||| |||||||||||    
T  9946442 aacttttattaaaaaatgtgaaaaagacaatgaatgcctacattaagg 9946489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 145 - 381
Target Start/End: Complemental strand, 10934201 - 10933966
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    ||||| ||||||| ||||||||||| |||||||||||||||       | ||||||||  | |||||||||  |||| ||||| ||||||||||||||||    
T  10934201 taaatgtaaattctttttcaaattattagatgcatttattatttttt-cttaaacatattcttaattaatattactaacttgtattgaaatatgaaaagt 10934103  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaa 344  Q
    || ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||       || |||||||||||    
T  10934102 caaatttaatacacatacaaacaaagaataatttggtaatattaacatacaaaacagacacattaattacactgacaacatttctgaaaaaatgtgaaaa 10934003  T
Q  345 aggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||  ||| ||||||||||| ||||||||||||    
T  10934002 aggcaataaatgcctacattaaggaacggagggagta 10933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 122 - 316
Target Start/End: Original strand, 35568890 - 35569084
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||| |||||| |||||| ||||| | ||||  |||||||||||||||| ||||||||||||       |||||||||||||||||||| ||| ||||    
T  35568890 ccatttaattttatttttgtccctaattgtaaaccccttttcaaattactaaatgcatttattattattttcctaaacatacccctaattagtactacta 35568989  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
      ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||||    
T  35568990 atttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaagaataatttagtaatattaatacataaaacagacacattaattacac 35569084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 125 - 367
Target Start/End: Original strand, 40979098 - 40979342
Alignment:
Q  125 tttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn--cctaaacatacccctaattaataccactat 222  Q
    |||||||||| |||| | ||||||| ||||  |||||||||||| |||||||||||||||          |||||||||||||||||||||||| |||||    
T  40979098 tttgattttatttttatccctaaatgtaaagcccttttcaaatttctagatgcatttatttatttattttcctaaacatacccctaattaatactactat 40979197  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||  ||||||||   |||||    
T  40979198 cttgtctttaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaatttcgtaatattaatacacaaaacatacatgttaattaccttgacaa 40979297  T
Q  323 cnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaag 367  Q
    |       ||||||| |||||||| ||||||||| ||||||||||    
T  40979298 cttttattaagaaatatgaaaaagacaatggatgcctacattaag 40979342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 94 - 350
Target Start/End: Complemental strand, 27642749 - 27642493
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc 193  Q
    ||||| ||||| |||| |||||||  || |||||||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||            
T  27642749 tactccctccgtccctatatgtaagcactcatttgattttatttttgtccataaatataaactccttttcaaattactagatgcatttattattattttt 27642650  T
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||||| |||||||| | ||||  || ||||||||||  |||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||    
T  27642649 ctaaacatacccttaattaatcctactaatttatcttgaaatacaaaaagtcaaatttaatacacatacaaacaaaggataatttagtaatattaacaca 27642550  T
Q  294 caaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaa 350  Q
     |||| ||||||||||| |||||  |||||       ||||||||||||||| ||||    
T  27642549 taaaatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaa 27642493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 124 - 323
Target Start/End: Original strand, 36347488 - 36347687
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| | ||||| |||||| |||||||||||| |||||||||||||||       |||||||||| ||||||||||||  |||| |    
T  36347488 atttgattttatttttgtccataaatgtaaatttcttttcaaattattagatgcatttattacctttttcctaaacatatccctaattaatattactaac 36347587  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||| | ||||||  ||||||||| |||||||||||| ||||||||||||| ||||||    
T  36347588 ttgtcttgaaatgtgaatagtcaaatttaatacacatacaaacaaaaatcaatttgataatattaatacacaaaacagatacattaattacactgacaac 36347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 122 - 312
Target Start/End: Complemental strand, 29866408 - 29866218
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    |||||||| |||| | || ||||||||| ||||   |||||||| ||||||||||||||||| |       |||||||||||||||||||||||| ||||    
T  29866408 ccatttgactttattctttttcctaaatgtaaacctcttttcaagttactagatgcatttataatttttttcctaaacatacccctaattaatactacta 29866309  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||| |||||||    
T  29866308 acttgtcttgaaatatgaaaagtcaaatttaatacacatacaaacaaaggacaacttggtaatattaacacacaaaaaagacatattaatt 29866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 120 - 316
Target Start/End: Complemental strand, 21912341 - 21912145
Alignment:
Q  120 acccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccac 219  Q
    ||||||||||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||||||||       |||||||||||||||||||||| | ||    
T  21912341 acccatttgattttatttttgtccctaaatgtaaactccttttcaaattacaagatgcatttattattattttcctaaacatacccctaattaatcctac 21912242  T
Q  220 tatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||  |||||||||||||  |||||||| | ||||||||||||||||||||  |||||||  ||||||||||||| |||| ||||||||||| |||||    
T  21912241 taatttgtcttgaaatacaaaaagtcaaacttaatacacatacaaacaaaagacaatttaataatattaacacataaaatagacacattaactacac 21912145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 125 - 323
Target Start/End: Original strand, 15898350 - 15898549
Alignment:
Q  125 tttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccactatc 223  Q
    ||||| |||| |||||| |||||||||||| || |||||||||||||||||||||||||||        |||||||||||   ||||||||||  ||| |    
T  15898350 tttgactttatttttgtccctaaatataaactctttttcaaattactagatgcatttattattatttttcctaaacatacttttaattaatactgctaac 15898449  T
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||||||||||| ||||| | || ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  15898450 ttgtcttgaaatttgaaaggccaaatttaatacacatacaaacaaaggacaatttgataatattaacacacaaaacagacacattaattacactgacaac 15898549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 126 - 381
Target Start/End: Complemental strand, 27798371 - 27798116
Alignment:
Q  126 ttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatctt 225  Q
    |||| |||| |||||||||||||| |||||  | ||| ||||||||| ||||||||||||           || ||||||||||||||||||| || |||    
T  27798371 ttgactttatttttgttcctaaatgtaaatcaccttttaaattactaaatgcatttattattttattttagaatatacccctaattaataccaataactt 27798272  T
Q  226 gtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnn 325  Q
    ||||||||||||||||||||| | ||||||||||||||||||||  | |||||  |||||||||||||||||||||||| ||||||||||| |||||       
T  27798271 gtcttgaaatatgaaaagtcaaacttaatacacatacaaacaaatgataatttgataatattaacacacaaaacagacaaattaattacactgacaatat 27798172  T
Q  326 nnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
         || ||||||||||||  ||||||||| || |||||||||||||||||||||    
T  27798171 ttcttaaaaaatgtgaaaaatacaatggatgcctgcattaagggacggagggagta 27798116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 193 - 381
Target Start/End: Original strand, 21574837 - 21575024
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||||||||||||||||| || | |||||||||||| |||||||| || ||||||||||| ||||||||||| ||||||| ||||||||||||     
T  21574837 cctaaacatacccctaattaatactacaaacttgtcttgaaacatgaaaagacaaatttaatacac-tacaaacaaaggacaatttggtaatattaacat 21574935  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||| ||||||||||| |||||  | |||       |||||||||||||||| |||||| || ||||||||||||||||||||||||    
T  21574936 acaaaatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaagacaatgggtgcctacattaagggacggagggagta 21575024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 194 - 316
Target Start/End: Original strand, 10523231 - 10523353
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| || ||||| |||||||||||||| ||||||| |||||||| ||||||||||||||    
T  10523231 ctaaacatacccctaattaatactactaacttgtcttgaaatataaatagtcaaatttaatacacataaaaacaaaaaacaatttggtaatattaacaca 10523330  T
Q  294 caaaacagacacattaattacac 316  Q
    |||||||||||||||||||||||    
T  10523331 caaaacagacacattaattacac 10523353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 118 - 313
Target Start/End: Original strand, 4857374 - 4857570
Alignment:
Q  118 atacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncct-aaacatacccctaattaatac 216  Q
    |||||||||||| |||| ||||||  |||||| |||| || |||||||||||| | ||||||||||||        || |||||||| ||||||||||||    
T  4857374 atacccatttgactttatttttgtctctaaatgtaaactcattttcaaattaccaaatgcatttattattttttttcttaaacatactcctaattaatac 4857473  T
Q  217 cactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
     |||| ||| |||| ||||||||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||| ||||||||||||||    
T  4857474 tactaacttatcttaaaatatgaaaagtcaaatttaatacacatacaaacaaatgacaatttagtaatattaacacataaaatagacacattaatta 4857570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 167 - 323
Target Start/End: Original strand, 12895139 - 12895295
Alignment:
Q  167 ttactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaac 266  Q
    |||||||||| ||||||||       |||||||||||| ||||||||||| |||| |||||||| |||| | |||| ||| |||||||||||||||||||    
T  12895139 ttactagatgtatttattatttttttcctaaacatacctctaattaatacaactaacttgtcttaaaatttaaaaaatcaaatttaatacacatacaaac 12895238  T
Q  267 aaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaac 323  Q
    |||  ||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  12895239 aaaagacaatttggtaatattaatacacaaaacagacacattaattacaccgacaac 12895295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 356
Target Start/End: Complemental strand, 20946284 - 20946072
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    |||||||||||  |||||| ||||||||||| ||||||||||        |||||||||| |||||||| ||| |||| ||||| |||||||||||||||    
T  20946284 ctaaatataaacccctttttaaattactagacgcatttattatttttttgctaaacatactcctaattagtactactaacttgttttgaaatatgaaaag 20946185  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaa 343  Q
    ||| ||||||||||||||||||||||  |||||||  |||||||||||||||||| |||||| |||||| |||  |||||       ||||||| |||||    
T  20946184 tcaaatttaatacacatacaaacaaatgacaatttgataatattaacacacaaaatagacacgttaattgcactaacaacgtttcttaagaaatatgaaa 20946085  T
Q  344 aaggcaatggatg 356  Q
    || ||||||||||    
T  20946084 aatgcaatggatg 20946072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 36750661 - 36750839
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccacta 221  Q
    ||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||||        |||||| |||||| ||||||||||  |||    
T  36750661 ccatttgattttatttttgtccctaaatataaacgccttttcaaattactagatgcatttatttttttttccctaaatatacccttaattaatactgcta 36750760  T
Q  222 tcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaaca 300  Q
     ||||| ||||||||| |||||||| |||||||||||||| |||||||| ||| | |  ||||||||||||||||||||    
T  36750761 acttgttttgaaatataaaaagtcaaatttaatacacatataaacaaaggacagtctaataatattaacacacaaaaca 36750839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 123 - 304
Target Start/End: Original strand, 5151087 - 5151267
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat 222  Q
    |||||||||||| |||||| ||||||| |||| ||| ||| |||||||||||||||||| | |       ||||||||||||| |||||| ||| ||||     
T  5151087 catttgattttatttttgtccctaaatgtaaactccctttgaaattactagatgcatttgtcaattttttcctaaacataccc-taattagtactactaa 5151185  T
Q  223 cttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagaca 304  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| ||||||| |||||||||| |||||||| |||||    
T  5151186 cttgtcttgaaatatgaaaagtcaaatttaatacacacacaaataaaggacaatttggtaatattaatacacaaaaaagaca 5151267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 38972033 - 38972205
Alignment:
Q  143 cctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    ||||||| ||||  ||||||||||||| |||||||||||||||       ||||||||||||| |||||||||| |||| ||| ||||||||||| ||||    
T  38972033 cctaaatttaaaccccttttcaaattaatagatgcatttattatttttttcctaaacatacccttaattaatactactaacttatcttgaaatataaaaa 38972132  T
Q  243 gtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||    ||| |||||||||||||||||    
T  38972133 gtcaaatttaatacacatacaaacaaaggacaatttggtaatattaaca-tttaaatagacacattaattacac 38972205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 381
Target Start/End: Complemental strand, 27587986 - 27587798
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||| | ||| |||||| |||| ||||| ||||||| |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||||    
T  27587986 cctaaacatactcttaaataatactactaacttgtattgaaatttgaaaaatcaaatttaatacacatacatacaaaggacaatttagtaatattaacac 27587887  T
Q  293 acaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||||||||| || ||||||       ||||||||||||||| | || ||  |  |||||||| ||||||||||||||    
T  27587886 acaaaacagacacattaattatactgacaacttttcttaagaaatgtgaaaaaagtaaagggagtttacattaaaggacggagggagta 27587798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 16039 - 16190
Alignment:
Q  161 ttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacat 260  Q
    |||||||||||||||||||||||||       |||||||||||||||  ||||||| |||| ||||||||||||| |||||||||| |||||||||| ||    
T  16039 ttcaaattactagatgcatttattattattttcctaaacatacccctggttaatactactaacttgtcttgaaatgtgaaaagtcaaatttaatacaaat 16138  T
Q  261 acaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||| ||||||| |||||||| ||||| |||| ||| |||||||||    
T  16139 acaaacaaaggacaatttagtaatattcacacaaaaaatagatacattaatt 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 118 - 310
Target Start/End: Original strand, 30347964 - 30348150
Alignment:
Q  118 atacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaatacc 217  Q
    ||||||||||||||||  |||| | ||||||| ||| | ||||||||||||| ||||| ||||| ||        | ||||||||||| ||||||||||     
T  30347964 atacccatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacatttttt-----tttcataaacataccc-taattaatact 30348057  T
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaa 310  Q
    |||| |||| ||||||||||||||||||| |||||||||||| |||||||||| | ||||| ||||||||||||||||||| |||||||||||    
T  30348058 actaacttgccttgaaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaaatagacacattaa 30348150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 124 - 315
Target Start/End: Original strand, 19281376 - 19281569
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn---cctaaacatacccctaattaataccact 220  Q
    ||||||||||| |||||||| ||||||||||  | ||||||||| |||||||| ||||||||          |||||||||| ||||||||||||| |||    
T  19281376 atttgattttatttttgttcataaatataaacgcattttcaaatcactagatgtatttattattattttttacctaaacatatccctaattaatactact 19281475  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |  |||| ||||||||||||   ||| ||||||||||||||||||||||  | ||||| |||||||||| |||||||||||| ||||||||||||    
T  19281476 aatttgttttgaaatatgaatt-tcaaatttaatacacatacaaacaaaagataatttagtaatattaatacacaaaacagatacattaattaca 19281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 93 - 313
Target Start/End: Complemental strand, 43454229 - 43454010
Alignment:
Q  93 atactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn 192  Q
    |||||| ||| | |||| |||||||| ||||| |||| |||| ||||||  || ||| ||||  ||||||||||||||  |||| |||||| |           
T  43454229 atactccctcagtccctatatgtaaacacccaattgactttatttttgtctctcaatgtaaacaccttttcaaattacatgatgtatttat-aatttttt 43454131  T
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    |||||||||| ||| |||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||||||  | | |||  |||||||||||     
T  43454130 cctaaacatatcccgaattaataccactaacttgtcttgaaatttgaaaaatcaaatttaatacacatacaaacaaaagatagtttgataatattaacat 43454031  T
Q  293 acaaaacagacacattaatta 313  Q
    ||||||| |||||||||||||    
T  43454030 acaaaactgacacattaatta 43454010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 7736183 - 7736052
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatat 237  Q
    |||| ||||||||||||  |||||||||||||||||| ||||||||||       |||||||||| |||||||||||||  ||| ||| |||||||||||    
T  7736183 ttgtccctaaatataaaccccttttcaaattactagacgcatttattatttttttcctaaacatatccctaattaatactgctaacttatcttgaaatat 7736084  T
Q  238 gaaaagtcagatttaatacacatacaaacaaa 269  Q
    ||||||||| |||||| |||||||||||||||    
T  7736083 gaaaagtcaaatttaacacacatacaaacaaa 7736052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 25690644 - 25690775
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaa-gtcagatttaatacacatacaaacaaagaacaatttcgtaa---tattaac 290  Q
    |||||||||||||||||||||| |||| ||||||||||||| | |||| ||   ||||||||||||||||||||||| ||||||| ||||   |||||||    
T  25690644 taaacatacccctaattaatacaactaacttgtcttgaaatttaaaaaagttgaatttaatacacatacaaacaaaggacaattt-gtaactatattaac 25690742  T
Q  291 acacaaaacagacacattaattacaccgacaac 323  Q
    |||||||||| ||||||||||||||||||||||    
T  25690743 acacaaaacatacacattaattacaccgacaac 25690775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 18729811 - 18729613
Alignment:
Q  122 ccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnn-cctaaacatacccctaattaataccact 220  Q
    ||||||||||||| |||| | ||||||| ||||  ||||||||||||| |||||||||||||||        |||||||||||||||||||||||| | |    
T  18729811 ccatttgatttta-ttttatccctaaatctaaaccccttttcaaattattagatgcatttattattatttttcctaaacatacccctaattaatactatt 18729713  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaaga----acaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |  ||   |||||||||||||||||| |||||||||||||||||||||| |    | | |||  |||||||||||||||||| |||||||||||||||||    
T  18729712 aatttaatttgaaatatgaaaagtcaaatttaatacacatacaaacaaacaaatgatactttaataatattaacacacaaaatagacacattaattacac 18729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 8717880 - 8718000
Alignment:
Q  158 cttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||||||||||||||| ||||||       |||||||||||||||||||||||  || | |||||||||||||||||||||||| ||||||||||    
T  8717880 cttttcaaattactagatgcacttattatttttttcctaaacatacccctaattaataatacgaacttgtcttgaaatatgaaaagtcaaatttaataca 8717979  T
Q  258 catacaaacaaagaacaattt 278  Q
     |||||||||||  |||||||    
T  8717980 tatacaaacaaatgacaattt 8718000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 193 - 316
Target Start/End: Original strand, 42644434 - 42644557
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacac 292  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||||| || |||||||| |||||||||||||  |||||||  |||||||| ||     
T  42644434 cctaaacatacccttaattaatacaactaacttgtcttgaaatatgaaaagacaaatttaatatacatacaaacaaatgacaatttgataatattagcat 42644533  T
Q  293 acaaaacagacacattaattacac 316  Q
    |||||| |  ||||||||||||||    
T  42644534 acaaaataatcacattaattacac 42644557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 11980863 - 11980741
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||||||| | ||||||||||| |||| | |||||| ||||||||||||||| |||||||||||||| |||||  | | ||| | ||||||||||||||    
T  11980863 ctaaacatatctctaattaatactactaacatgtcttaaaatatgaaaagtcaaatttaatacacatataaacagtggataatatagtaatattaacaca 11980764  T
Q  294 caaaacagacacattaattacac 316  Q
    ||||| |||||||||||||||||    
T  11980763 caaaatagacacattaattacac 11980741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 291
Target Start/End: Complemental strand, 34676325 - 34676171
Alignment:
Q  138 ttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaaca-tacccctaattaataccactatcttgtcttgaaata 236  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||        || ||||| ||||||||||||||||  ||| ||| | ||||||||    
T  34676325 ttgtccctaaatataaactccttttcaaattactagatacatttattttttttttccgaaacaatacccctaattaatactgctaacttatattgaaata 34676226  T
Q  237 tgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaaca 291  Q
    ||| |||||| |||||| |||||||||||||||| | ||||| ||||||||||||    
T  34676225 tgataagtcaaatttaacacacatacaaacaaaggataatttggtaatattaaca 34676171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 43060482 - 43060589
Alignment:
Q  208 aattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacat 307  Q
    ||||||||| |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||  | ||| | ||||||||||||||||||| ||||||||    
T  43060482 aattaatactactaacttgtcttggaatatgaaa-gtcaaatttaatacacatacaaacaaaagataatatggtaatattaacacacaaaatagacacat 43060580  T
Q  308 taattacac 316  Q
    |||||||||    
T  43060581 taattacac 43060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 30317886 - 30317793
Alignment:
Q  204 ccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaa 297  Q
    ||||||||||||| |||| ||||  |||||||||||||||||| |||||||||||| |||||||||| | ||||| ||||||||||||||||||    
T  30317886 ccctaattaatactactaacttgcattgaaatatgaaaagtcaaatttaatacacacacaaacaaaggaaaatttggtaatattaacacacaaa 30317793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 312
Target Start/End: Complemental strand, 4745326 - 4745156
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactat---cttgtcttgaaatatgaa 240  Q
    ||||||||||| |||||||||||||||||||||||||||||        |  ||| |||||  |||||||||| | |||   | |||||| |||||| ||    
T  4745326 ctaaatataaactccttttcaaattactagatgcatttatttttattttctgaaatatacct-taattaatactattattaacctgtcttaaaatataaa 4745228  T
Q  241 aagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||| ||||||||||||||||||||||  ||||||| ||||||||||| ||||||| | |||||||||||    
T  4745227 aagtcaaatttaatacacatacaaacaaatgacaatttggtaatattaacccacaaaataaacacattaatt 4745156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 381
Target Start/End: Original strand, 15967124 - 15967257
Alignment:
Q  249 tttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtg-aaaaagg 347  Q
    ||||||| ||||| ||| ||||   ||||| |||||||||| |||||||||||||||||||||||||||||||||       |||||||||| |||||||    
T  15967124 tttaataaacatataaataaagggtaatttggtaatattaatacacaaaacagacacattaattacaccgacaacctttcttaagaaatgtgaaaaaagg 15967223  T
Q  348 caatggatggctacattaagggacggagggagta 381  Q
    ||||| ||| ||||||||| ||||||| ||||||    
T  15967224 caatgaatgtctacattaaaggacggaaggagta 15967257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 731908 - 732031
Alignment:
Q  194 ctaaacatacccctaattaa-taccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaac-aaagaacaatttcgtaatattaaca 291  Q
    ||||| ||| || ||||||| ||||| || ||||||||||||||||||||  || ||||||||||||||||||| ||||||||||||  |||||||||||    
T  731908 ctaaatataaccttaattaagtaccagtaacttgtcttgaaatatgaaaaaacaaatttaatacacatacaaacaaaagaacaatttgataatattaaca 732007  T
Q  292 cacaaaacagacacattaattaca 315  Q
    ||||||||| ||| ||||| ||||    
T  732008 cacaaaacaaacatattaactaca 732031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 312
Target Start/End: Complemental strand, 600912 - 600794
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    |||||||||  |||||||||||  |||| |||||||| |||||| |||| ||| |||||||||| |||||||||||  |||||||  |||||||||||||    
T  600912 ctaaacataatcctaattaatattactaacttgtcttaaaatataaaaaatcaaatttaatacatatacaaacaaatgacaatttgataatattaacaca 600813  T
Q  294 caaaacagacacattaatt 312  Q
    || || |||||||||||||    
T  600812 cataatagacacattaatt 600794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 31641045 - 31641207
Alignment:
Q  92 aatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnn 191  Q
    ||||||| ||||| || | |||||||| || | ||||| |||| |||||| ||||||| |||||  ||||||||||||||||||| ||||||||          
T  31641045 aatactccctccgtccttatatgtaaacactcgtttgactttatttttgtccctaaatttaaatctcttttcaaattactagatgtatttattattattt 31641144  T
Q  192 nc--ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagattta 252  Q
        |||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||    
T  31641145 ttttctaaacatacccctaattaataccactaacttatcttgaaatttgaaaagtcaaattta 31641207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 32401339 - 32401486
Alignment:
Q  121 cccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccact 220  Q
    ||||||||| |||| |||||| |||||||  ||| || ||||||||||||||||  |||||||||       ||||| || || |||||||||||| ||     
T  32401339 cccatttgactttatttttgtccctaaatgcaaactc-ttttcaaattactagaaacatttattattattttcctaagcacactcctaattaatactacc 32401437  T
Q  221 atcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    | |||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  32401438 aacttgtcttaaaatatgaaaaatcaaatttaatacacatacaaacaaa 32401486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 41521300 - 41521217
Alignment:
Q  229 ttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||||||||||||| |||||||||||||| |||||||  |||||||  |||||||||||||||||| ||||| |||||||    
T  41521300 ttgaaatatgaaaagtcaaatttaatacacatataaacaaatgacaatttaataatattaacacacaaaatagacatattaatt 41521217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 16496582 - 16496480
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    ||||||||||  ||| |||||| | || ||| |||||||||||||||||||| |||||||| |||||||||||||| | ||||| |||||||||| ||||    
T  16496582 taaacatacctttaactaatactattaacttatcttgaaatatgaaaagtcaaatttaatatacatacaaacaaaggataatttggtaatattaatacac 16496483  T
Q  295 aaa 297  Q
    |||    
T  16496482 aaa 16496480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 9375611 - 9375700
Alignment:
Q  209 attaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    |||||||| |||| ||| |||||||||||||||| ||| |||||||| |||||||||||||  ||||||| ||||||||| |||||||||    
T  9375611 attaatactactaacttatcttgaaatatgaaaaatcaaatttaataaacatacaaacaaaagacaatttggtaatattagcacacaaaa 9375700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 144 - 313
Target Start/End: Complemental strand, 16969570 - 16969402
Alignment:
Q  144 ctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaag 243  Q
    |||||||||| |||| ||| || |||||| ||||||||||||        ||||||||||| ||||||||||  ||||  ||||||| |||||| ||||     
T  16969570 ctaaatataagttcccttttaa-ttactaaatgcatttattattatttttctaaacatacctctaattaatattactaaattgtcttaaaatattaaaat 16969472  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||| |||||| ||||||||||| ||| |||| |||  ||||||||||| |||||  ||||||||||||||    
T  16969471 tcaaatttaacacacatacaaataaataacagtttgataatattaacaaacaaattagacacattaatta 16969402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 24781256 - 24781346
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||| |||| |||||| ||| |||||||||||||||||| ||||||||||||  ||||||||||| |||||| | ||||||||||||||    
T  24781256 ttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaacacattaattaca 24781346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 27925520 - 27925429
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||| ||||| |||||||| |||   ||||||||| |||| |||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  27925520 tactccctccgtccctgtatctaagcccccatttgactttatttttgtccctaaatgtaaatcccttttcaaattactagatgcatttatta 27925429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 129787 - 129635
Alignment:
Q  159 ttttcaaattactagatgcatttattannnnnnncctaaacatacccc-taattaataccactatcttgtcttgaaatatgaaaagtcagatttaataca 257  Q
    |||| ||||||||||||||||||||||       |||| ||||||||| |||||||||| | || |||||||| ||||||||||| ||| |||||||  |    
T  129787 tttttaaattactagatgcatttattattt----cctatacataccccctaattaatactattaacttgtcttaaaatatgaaaaatcaaatttaattaa 129692  T
Q  258 catacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
      |||    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  129691 --tacccctaaagaacaatttggtaatattaatacacaaaatagacacattaattacac 129635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 20975691 - 20975752
Alignment:
Q  123 catttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatt 184  Q
    |||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  20975691 catttgattttatttttgttcttaaatgtaaactccttttcaaattactagatgcatttatt 20975752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 298
Target Start/End: Complemental strand, 10656785 - 10656633
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||  ||||| |||||||| |||||||||||||||       ||||||||||||| ||||||||||  ||| ||| | ||||||||||||||||    
T  10656785 taaatataatctccttctcaaattattagatgcatttattaattttttcctaaacataccc-taattaatactgctaacttatgttgaaatatgaaaagt 10656687  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaa 298  Q
    || |||||| ||  ||||||| |||  | ||||| ||||| |||||||| ||||    
T  10656686 caaatttaacaccaatacaaaaaaaagataatttggtaattttaacacataaaa 10656633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 556148 - 556054
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatatta 288  Q
    ||||||||| | |||||||||| || ||  ||||||||||||||||||||||| |||||||||| ||||| | |||  ||||||| |||||||||    
T  556148 ctaaacatagcactaattaatatcattaatttgtcttgaaatatgaaaagtcaaatttaatacatatacagaaaaatgacaatttagtaatatta 556054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 5764181 - 5764290
Alignment:
Q  195 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacac 294  Q
    |||||||||| ||||||||||  | || |||||| ||||||||||||||| | |||||||||  ||  |||||||| | ||||| ||||| |||||||||    
T  5764181 taaacatacctctaattaatattattaacttgtcgtgaaatatgaaaagttaaatttaatacttatgtaaacaaaggataatttagtaatgttaacacac 5764280  T
Q  295 aaaacagaca 304  Q
    |||| |||||    
T  5764281 aaaatagaca 5764290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 19089016 - 19089081
Alignment:
Q  232 aaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaa 297  Q
    ||||||||||||||| |||||||||| |||||||||||  ||||||| |||||||||| |||||||    
T  19089016 aaatatgaaaagtcaaatttaatacaaatacaaacaaatgacaatttagtaatattaatacacaaa 19089081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 7510786 - 7510695
Alignment:
Q  94 tactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||| ||||| |||| |||||||| || ||||||| |||| | |||| ||||||| ||||  ||||||||||||||||||| |||||||||    
T  7510786 tactccctccgtccctatatgtaaacactcatttgactttattattgtccctaaatgtaaacgccttttcaaattactagatacatttatta 7510695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 25690507 - 25690597
Alignment:
Q  91 aaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcattt 181  Q
    |||||||| || || |||| ||| |||  ||||||||||||||| |||||| ||||||| ||||  ||||||||| |||||||||||||||    
T  25690507 aaatactcccttcgtccctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaacttactagatgcattt 25690597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 31642484 - 31642553
Alignment:
Q  252 aatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||||||||| |||||||  ||| ||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  31642484 aatacacatataaacaaaagacagtttggtaatattaacacacaaaa-agacacattaattacactgacaa 31642553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 3529991 - 3529906
Alignment:
Q  227 tcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgt-aatattaacacacaaaacagacacattaatta 313  Q
    |||| |||||| || ||||| |||||||||||||| |||||||||||||||| || ||||||   |||||||| ||||||||||||||    
T  3529991 tcttaaaatataaatagtcaaatttaatacacatataaacaaagaacaatttagtaaatatt--tacacaaaatagacacattaatta 3529906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 14044455 - 14044571
Alignment:
Q  194 ctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacaca 293  Q
    ||||| ||| |||||||||||||  ||| ||| |||| ||||||||||||||| |||||| ||||||| ||| |||  | |||||  ||||||||| |||    
T  14044455 ctaaatatatccctaattaatactgctaacttatcttcaaatatgaaaagtcaaatttaacacacataaaaataaatgataatttgataatattaataca 14044554  T
Q  294 caaaacagacacattaa 310  Q
     |||| ||||| |||||    
T  14044555 taaaatagacatattaa 14044571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 27925387 - 27925337
Alignment:
Q  331 aagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||||||||    
T  27925387 aagaaatgtgaaaaaagcaatgggtgcctacataaagggacggagggagta 27925337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 29874306 - 29874257
Alignment:
Q  193 cctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa 242  Q
    |||||||||||||||||||||||| | || ||||| ||||||||||||||    
T  29874306 cctaaacatacccctaattaatactaataacttgttttgaaatatgaaaa 29874257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 32068131 - 32068070
Alignment:
Q  197 aacatacccctaattaataccactatctt-gtcttgaaatatgaaaagtcagatttaataca 257  Q
    ||||||||| || ||||||| |||| ||| ||||||||||||||||||||| ||||||||||    
T  32068131 aacatacccttacttaatactactaactttgtcttgaaatatgaaaagtcaaatttaataca 32068070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 7510667 - 7510631
Alignment:
Q  280 gtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7510667 gtaatattaacacacaaaacatacacattaattacac 7510631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 33584045 - 33583997
Alignment:
Q  137 tttgttcctaaatataaattccttttcaaattactagatgcatttatta 185  Q
    ||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  33584045 tttgttcttaaatataaattcttttttaaattattagatgcatttatta 33583997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 29874560 - 29874465
Alignment:
Q  88 cctaaatactcgctccgcccctgtatgtaaatacccatttga-ttttacttttgttcctaaatataaattccttttcaaattactagatgcattta 182  Q
    ||||||||||| ||| | |||| ||| ||| | | ||||||| ||||  |||||||||||||| ||||  || |||||||||||||||||||||||    
T  29874560 cctaaatactccctcagtccctatatataagtcctcatttgacttttttttttgttcctaaatgtaaaccccctttcaaattactagatgcattta 29874465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 33862845 - 33862900
Alignment:
Q  267 aaagaacaatttcgtaatattaacacacaaaacagacacattaattacaccgacaa 322  Q
    |||| ||||||| |||||||||  | |||||||||||||||||||||||| |||||    
T  33862845 aaaggacaatttagtaatattagtatacaaaacagacacattaattacactgacaa 33862900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 312
Target Start/End: Complemental strand, 457908 - 457800
Alignment:
Q  206 ctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaata--cacatacaaacaaagaacaatttcgtaatattaacacacaaaacagac 303  Q
    ||||||||||  || | ||| |||| |||||||||| |||| ||||||||  |||||| |||||||  |||||||  ||||||| | |||||||| |||     
T  457908 ctaattaatattaccaacttctcttaaaatatgaaatgtcaaatttaatacacacatataaacaaatgacaatttaataatattcagacacaaaatagat 457809  T
Q  304 acattaatt 312  Q
    |||||||||    
T  457808 acattaatt 457800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 32067906 - 32067857
Alignment:
Q  263 aaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||| ||||    
T  32067906 aaacaaatgacaatttggtaatattaacacacaaaatagacacatgaatt 32067857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 29874247 - 29874203
Alignment:
Q  272 acaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    ||||||| ||||||||||||||||||| ||| ||||||| |||||    
T  29874247 acaatttggtaatattaacacacaaaatagatacattaactacac 29874203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 91 - 381
Target Start/End: Original strand, 1768 - 2058
Alignment:
Q  91 aaatactcgctccgcccctgtatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnn 190  Q
    |||||||| ||||  |||| ||| |||  |||||||||| |||| |||||| ||| ||| ||||  |||||||||||||||||||||||||||||         
T  1768 aaatactccctccatccctatatctaagcacccatttgactttatttttgtccctcaatgtaaaccccttttcaaattactagatgcatttattatgttt 1867  T
Q  191 nncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaac 290  Q
      |||||||||||||||||||||||| ||||  |||||||| |||||||||||||| ||||||||||||||||||||||| | ||||| |||||||||||    
T  1868 ttcctaaacatacccctaattaatactactaatttgtcttgcaatatgaaaagtcaaatttaatacacatacaaacaaaggataatttggtaatattaac 1967  T
Q  291 acacaaaacagacacattaattacaccgacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagta 381  Q
    |||||||| |||||||||||||||||  |||||       ||||||||||||||| |||| ||  || |||||  |||||| |||||||||    
T  1968 acacaaaatagacacattaattacactaacaacttatcttaagaaatgtgaaaaaagcaaagggaggttacatacagggacagagggagta 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 145 - 313
Target Start/End: Original strand, 38386 - 38554
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatg-aaaag 243  Q
    ||||| ||||| | |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||| |||||||||||||||| |||||    
T  38386 taaatgtaaatcctttttcaaattactagatgcatttattatttttt-cctaaacatacccctaattaatactactaacttgtcttgaaatatgaaaaag 38484  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatta 313  Q
    ||| |||||||| ||||| |||||| | | ||| | ||||||||||||||||||| ||||||||||||||    
T  38485 tcaaatttaataaacataaaaacaatggataatatggtaatattaacacacaaaatagacacattaatta 38554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 99778 - 99888
Alignment:
Q  197 aacatacccctaattaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaa 296  Q
    ||||| || ||||||||||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  99778 aacatgcctctaattaatactactaacttgtcttgaaatatgaaaagtcaaatttaatacacattcaaacaaaagacaatttcgtaatattaacacacaa 99877  T
Q  297 aacagacacat 307  Q
    || ||||||||    
T  99878 aatagacacat 99888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 49332 - 49162
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaa-g 243  Q
    ||||| ||||| |||||||||||||||||||| ||||||||       |||||||||||||||||||||||| ||||  |||| |||||||||||||| |    
T  49332 taaatgtaaatcccttttcaaattactagatgtatttattatttttt-cctaaacatacccctaattaatactactaatttgttttgaaatatgaaaaag 49234  T
Q  244 tcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||| |||||||| |||| ||||||||  |||||||  |||||||||||||||||  ||||| ||||||||||    
T  49233 tcaaatttaataaacatgcaaacaaatgacaatttaataatattaacacacaaagtagacatattaattaca 49162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 61191 - 61361
Alignment:
Q  145 taaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 244  Q
    |||||||||| || || |||||||| || ||||||||||||        ||||||| | | ||||||||||  ||||  || | || || ||||||||||    
T  61191 taaatataaactctttatcaaattattatatgcatttattattatttttctaaacacatctctaattaatattactaatttattttaaattatgaaaagt 61290  T
Q  245 cagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
     | |||||||||||||| ||| |||| |||||||  |||||||||||||||||||| |||| |||||||||    
T  61291 taaatttaatacacatataaataaaggacaatttaataatattaacacacaaaacaaacacgttaattaca 61361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 214806 - 214643
Alignment:
Q  157 ccttttcaaattactagatgcatttattannnnnnnc--ctaaacatacccctaattaata--ccactatcttgtcttgaaatatgaaaagtcagattta 252  Q
    |||||||||||||||||||||||||||||          ||||||||||||||||||||||  | |||| ||| |||| |||||| |||||||| |||||    
T  214806 ccttttcaaattactagatgcatttattatatattttttctaaacatacccctaattaatatactactaacttatcttaaaatataaaaagtcaaattta 214707  T
Q  253 atacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacac 316  Q
    |||||||||||||||||  ||||||| |||||||||||||| |||  |||||||||||||||||    
T  214706 atacacatacaaacaaatgacaatttggtaatattaacacaaaaactagacacattaattacac 214643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 218 - 382
Target Start/End: Complemental strand, 22183 - 22024
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattacacc 317  Q
    |||| |||||||| ||||||||||||| | |||||||| |||||||||||||| ||||| | |||||||||| |||||||||| |||||||||||||||     
T  22183 actaacttgtcttcaaatatgaaaagttaaatttaatatacatacaaacaaaggacaatatggtaatattaatacacaaaacaaacacattaattacact 22084  T
Q  318 gacaacnnnnnnnaagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtac 382  Q
    || |||          ||||||||||||| ||||   || |||||||||||||||||||||||||    
T  22083 gataacatttc-----aaatgtgaaaaagacaatatgtgcctacattaagggacggagggagtac 22024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 18792 - 18718
Alignment:
Q  238 gaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaatt 312  Q
    ||||||||| |||||| ||||||| |||||||  ||||||| ||||||||||| ||||||| | ||| |||||||    
T  18792 gaaaagtcaaatttaaaacacatagaaacaaatgacaatttggtaatattaacccacaaaataaacaaattaatt 18718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 111 - 269
Target Start/End: Complemental strand, 25929 - 25771
Alignment:
Q  111 tatgtaaatacccatttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnnc-ctaaacatacccctaa 209  Q
    |||||||  ||| ||||||||||| |||||| ||||||| ||||   ||||||||||||||||||  ||||||||         ||||||||||||||||    
T  25929 tatgtaagcacctatttgattttagttttgtccctaaatgtaaacctcttttcaaattactagatatatttattatttttttttctaaacatacccctaa 25830  T
Q  210 ttaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaa 269  Q
    ||||||| |||  |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  25829 ttaatactactcacttgtcttgaaatatg-aaagtcaaatttaatacacatacaaacaaa 25771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 124 - 251
Target Start/End: Complemental strand, 24276 - 24149
Alignment:
Q  124 atttgattttacttttgttcctaaatataaattccttttcaaattactagatgcatttattannnnnnncctaaacatacccctaattaataccactatc 223  Q
    ||||||||||| |||||| ||||||| |||||    ||||||||||||||||||||||| ||        ||||||||||||||||||||||| | || |    
T  24276 atttgattttatttttgtccctaaatgtaaatcttctttcaaattactagatgcatttactattttttttctaaacatacccctaattaatactattaac 24177  T
Q  224 ttgtcttgaaatatgaaaagtcagattt 251  Q
    || |||||||||||||||||||| ||||    
T  24176 ttatcttgaaatatgaaaagtcaaattt 24149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 24145 - 24092
Alignment:
Q  331 aagaaatgtgaaaaaggcaatggatggctacattaagggacggagggagtacat 384  Q
    ||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||    
T  24145 aagaaatgtgaaaaatgcaatgaatgcctacattaaaggacggagggagtacat 24092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 315
Target Start/End: Complemental strand, 7700 - 7604
Alignment:
Q  218 actatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||| | ||| |||||| |||||| | |||||||    
T  7700 actaacttgtcttgaaatatgaaaagtcaaatttaatacacatataaacaaaggacaattttgtaatacttaca-acaaaatagacacctcaattaca 7604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 315
Target Start/End: Original strand, 23639 - 23729
Alignment:
Q  224 ttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaaacagacacattaattaca 315  Q
    ||||||| |||| |||||| ||| |||||||||||||||||| ||||||||||||  ||||||||||| |||||| | ||||||||||||||    
T  23639 ttgtcttcaaatgtgaaaaatcaaatttaatacacatacaaa-aaagaacaatttgataatattaacatacaaaataaacacattaattaca 23729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 5866 - 5954
Alignment:
Q  209 attaataccactatcttgtcttgaaatatgaaaagtcagatttaatacacatacaaacaaagaacaatttcgtaatattaacacacaaa 297  Q
    |||||||| |||| ||||| || || |||||||||||| ||| ||||||||||  ||||||||||||||| |||| ||| |||||||||    
T  5866 attaatactactaacttgtattaaattatgaaaagtcaaattaaatacacatatgaacaaagaacaatttagtaaaattcacacacaaa 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University