View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13831_high_13 (Length: 345)
Name: NF13831_high_13
Description: NF13831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13831_high_13 |
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Alignment Details
Target: chr6 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 5 - 330
Target Start/End: Original strand, 34358991 - 34359316
Alignment:
| Q |
5 |
aagaatatagcaaaaagtaattaaagggatgatggtgatcatggatattgaatattgatcaagctatatatagtattagtaatcaaatacttcttactag |
104 |
Q |
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| T |
34358991 |
aagagtatagcaaaaagtaattaaagggatgatggtgatcatggatattgaatattgatcaagctatttatagtattagtaatcaaatacttcttattag |
34359090 |
T |
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| Q |
105 |
tgtttgtatttgtgttttatgtagttggtttgcgtgtggaattatgtgagattctaaattatttttcaaagataatgatagtggtaaaatttaggactat |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
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| T |
34359091 |
tgtttgtatttgtgttttatgtagttggtttgcgtgtggaattatgtgagattctaaattatttttcaaagaaaatgacagtggtaaaatttaggactat |
34359190 |
T |
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| Q |
205 |
atgtgtatacatgttagtcaaaagttttgtgtcctttttacatgattgaggaattgcacttatgacatgttatttatggtatatagtttgtttcataata |
304 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34359191 |
atgtgtatacatgttagtcaaaagttttgtgtcctttttacatgattgaggaattgcacttatgacatgttatttatggtatatagtttgtttcataata |
34359290 |
T |
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| Q |
305 |
cttttgagggggtccatatattcaac |
330 |
Q |
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|||||||||||||||||||||||||| |
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| T |
34359291 |
cttttgagggggtccatatattcaac |
34359316 |
T |
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