View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13831_high_14 (Length: 313)
Name: NF13831_high_14
Description: NF13831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13831_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 7228557 - 7228249
Alignment:
| Q |
1 |
cacattgattgttaatatttttagattgttggatgtatatatgcgttgggatgaactaaagttataagctcgggacaatgtcaaagtacttaatacatat |
100 |
Q |
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| T |
7228557 |
cacattgattgttaatatttttagattgttggatgtatatatgtgttgggatgaactaaagttataagctcggtacaatgtcaaagtacttaatatgtat |
7228458 |
T |
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| Q |
101 |
agttgagcgctctacgaaacttgaggttttttcgaatcctattaaaactaggagttagggtttagggtttcaacttggagtt-ttttctaatcctggaac |
199 |
Q |
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| T |
7228457 |
agtcaagcgctctacgaaatttgagattctttcgaattttattaaaactaggagttagggtttagggtttcaacttggagtttttttctaatcctgggtc |
7228358 |
T |
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| Q |
200 |
tcaacttgtgtaaacatttggcgacaaagaaaatattataatctatgatcggtccatattggctattgatgtcatttcatatcgatctttcaatttcatc |
299 |
Q |
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||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
7228357 |
tcaacttgtgtaaacatttcgtgacaaagaaaatattataatctatgatcggtccatattggctattgatgtcatttcatgtcgatctttcaatttcatc |
7228258 |
T |
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| Q |
300 |
cagtataat |
308 |
Q |
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|||| |||| |
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| T |
7228257 |
cagtgtaat |
7228249 |
T |
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