View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13831_low_18 (Length: 307)
Name: NF13831_low_18
Description: NF13831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13831_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 289
Target Start/End: Original strand, 41735502 - 41735783
Alignment:
| Q |
8 |
atattattctaccatatgcctttgttgtcgaaccctcactgaggagttacatggatcatgaaaggattacaagaatcagttgaaacagaagtaatcacca |
107 |
Q |
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| T |
41735502 |
atattattctaccatatgcctttgttgtcgaaccctcactgagaagttacatggatcatgaaaggattacaagaatcagttgaaacagaagtaatcacca |
41735601 |
T |
|
| Q |
108 |
ttgataaatcttatcacaaaaaaggcttaacaaaagaggtaagatcacataccatgcgacaattatgttcctcgtgttactatgcccgcctttgtggtaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
41735602 |
ttgataaatcttatcacaaaaaaggcttaacaaaagaggtaagatcacataccatgcgacaattatgttcctcgtgttactatggccgcctttgtggtaa |
41735701 |
T |
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| Q |
208 |
gccaggtcatcatgcacctcagtgcaaacatcgcaagaggaaagacaatcctcttaaagctaacttgactgaatgaggtgac |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735702 |
gccaggtcatcatgcacctcagtgcaaacatcgcaagaggaaagacaatcctcttaaagctaacttgactgaatgaggtgac |
41735783 |
T |
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