View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13835_low_28 (Length: 266)
Name: NF13835_low_28
Description: NF13835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13835_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 8813364 - 8813128
Alignment:
| Q |
14 |
gaagcaaggagcaaacataagcatgctgcagccatacaaacataaatgctcctccaagtggaagtcattattaaaatttaacaataatctcactaacaat |
113 |
Q |
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| T |
8813364 |
gaagcaaggagcaaacataagcatgctgcagccatacaaacataaatgctcctccaagtggaagtcattattaaaatttaacaataatctcactaacaat |
8813265 |
T |
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| Q |
114 |
tgtaagtctaagtcaggcaataaaatcctcaacattttctttcattacaagtagacatagattagcaattcaattggaacaaacaaagcttaatgtcatg |
213 |
Q |
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| T |
8813264 |
tgtaagtctaagtcaggcaataaaatcctcaacattttctttcattacaagtagacatagattagcaattcaattggaacaaacaaagcttaatgtcatg |
8813165 |
T |
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| Q |
214 |
gaacaatatcaaattgccacatacaatcttatcttgg |
250 |
Q |
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| T |
8813164 |
gaacaatatcaaattgccacatacaatcttatcttgg |
8813128 |
T |
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