View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13835_low_5 (Length: 688)

Name: NF13835_low_5
Description: NF13835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13835_low_5
NF13835_low_5
[»] chr1 (43 HSPs)
chr1 (349-650)||(28031341-28031644)
chr1 (7-311)||(28030827-28031134)
chr1 (14-121)||(6766374-6766481)
chr1 (14-121)||(16120593-16120700)
chr1 (14-121)||(36757639-36757746)
chr1 (14-121)||(6402563-6402670)
chr1 (14-121)||(11641220-11641327)
chr1 (14-121)||(17305956-17306063)
chr1 (14-121)||(30003535-30003642)
chr1 (1-112)||(38153417-38153528)
chr1 (14-121)||(42735318-42735428)
chr1 (4-123)||(27292640-27292759)
chr1 (14-121)||(52024028-52024135)
chr1 (16-121)||(44644510-44644615)
chr1 (14-113)||(48526837-48526936)
chr1 (14-121)||(9342798-9342905)
chr1 (14-121)||(36399100-36399207)
chr1 (14-121)||(40771925-40772032)
chr1 (14-121)||(44647866-44647973)
chr1 (7-121)||(24321261-24321377)
chr1 (315-366)||(28031210-28031261)
chr1 (14-121)||(30701720-30701827)
chr1 (14-116)||(4302125-4302227)
chr1 (14-116)||(40977641-40977743)
chr1 (16-108)||(26910091-26910183)
chr1 (14-121)||(42788695-42788802)
chr1 (14-113)||(19711845-19711940)
chr1 (14-121)||(30385298-30385405)
chr1 (15-116)||(25695404-25695508)
chr1 (14-113)||(3485360-3485459)
chr1 (14-121)||(31444925-31445032)
chr1 (14-112)||(40800540-40800638)
chr1 (14-116)||(15382579-15382681)
chr1 (14-116)||(34634914-34635016)
chr1 (20-65)||(7568645-7568690)
chr1 (14-107)||(48375018-48375111)
chr1 (21-115)||(50972794-50972892)
chr1 (46-110)||(15912521-15912585)
chr1 (14-121)||(27984558-27984664)
chr1 (25-87)||(52163615-52163677)
chr1 (1-78)||(9881321-9881398)
chr1 (30-107)||(16689840-16689917)
chr1 (14-50)||(22575740-22575776)
[»] chr4 (51 HSPs)
chr4 (1-121)||(36523108-36523228)
chr4 (14-121)||(43967725-43967832)
chr4 (14-121)||(44232230-44232337)
chr4 (17-112)||(25101731-25101826)
chr4 (14-121)||(38416803-38416910)
chr4 (8-112)||(2571029-2571133)
chr4 (14-117)||(5428584-5428685)
chr4 (14-121)||(39307698-39307805)
chr4 (14-121)||(2760880-2760987)
chr4 (14-121)||(26169988-26170095)
chr4 (14-121)||(29830345-29830452)
chr4 (14-121)||(35381047-35381154)
chr4 (14-121)||(54330843-54330950)
chr4 (14-121)||(55209727-55209834)
chr4 (14-116)||(25296733-25296835)
chr4 (4-113)||(3036990-3037099)
chr4 (14-114)||(12625260-12625360)
chr4 (16-116)||(55800841-55800941)
chr4 (14-121)||(7614617-7614724)
chr4 (25-116)||(34652211-34652302)
chr4 (14-121)||(38721339-38721446)
chr4 (15-121)||(27407773-27407879)
chr4 (7-121)||(37767104-37767218)
chr4 (25-118)||(29051689-29051782)
chr4 (14-86)||(4467672-4467744)
chr4 (16-116)||(55191831-55191931)
chr4 (14-113)||(12240331-12240430)
chr4 (14-113)||(35686383-35686482)
chr4 (14-113)||(38716897-38716995)
chr4 (14-121)||(47386439-47386546)
chr4 (14-120)||(25918206-25918312)
chr4 (7-113)||(31010224-31010330)
chr4 (19-121)||(50205745-50205847)
chr4 (14-114)||(30446307-30446406)
chr4 (14-121)||(17610282-17610389)
chr4 (14-121)||(26125710-26125817)
chr4 (14-93)||(45291862-45291941)
chr4 (14-113)||(19433511-19433614)
chr4 (34-112)||(27755730-27755808)
chr4 (17-118)||(20875403-20875504)
chr4 (22-121)||(23360180-23360276)
chr4 (7-121)||(9029595-9029712)
chr4 (17-107)||(56297858-56297948)
chr4 (7-116)||(30191619-30191723)
chr4 (59-116)||(34323076-34323133)
chr4 (17-108)||(34316536-34316626)
chr4 (14-94)||(19595734-19595814)
chr4 (14-113)||(10550434-10550535)
chr4 (15-65)||(19903804-19903854)
chr4 (14-116)||(50620835-50620937)
chr4 (21-114)||(40682627-40682720)
[»] chr7 (49 HSPs)
chr7 (1-121)||(36341622-36341742)
chr7 (14-121)||(28061668-28061775)
chr7 (14-121)||(36623310-36623417)
chr7 (14-121)||(47156029-47156136)
chr7 (7-121)||(38851993-38852107)
chr7 (14-121)||(41897990-41898097)
chr7 (14-121)||(42890496-42890603)
chr7 (14-118)||(30342079-30342183)
chr7 (18-121)||(8683820-8683923)
chr7 (14-121)||(32431511-32431618)
chr7 (14-116)||(40256064-40256166)
chr7 (17-118)||(27045564-27045665)
chr7 (14-121)||(6766703-6766810)
chr7 (14-113)||(7438913-7439012)
chr7 (14-121)||(7457875-7457981)
chr7 (14-121)||(39130079-39130186)
chr7 (14-121)||(40090071-40090178)
chr7 (25-116)||(42662194-42662284)
chr7 (14-121)||(48602438-48602545)
chr7 (14-108)||(44732027-44732121)
chr7 (40-121)||(46322144-46322225)
chr7 (14-113)||(11502733-11502832)
chr7 (14-121)||(16778507-16778614)
chr7 (14-121)||(20885105-20885212)
chr7 (14-121)||(35117128-35117234)
chr7 (25-119)||(7169130-7169224)
chr7 (14-118)||(4131656-4131760)
chr7 (14-114)||(46479838-46479938)
chr7 (4-118)||(5529016-5529130)
chr7 (14-116)||(36585116-36585218)
chr7 (25-121)||(2952424-2952521)
chr7 (15-116)||(25566702-25566802)
chr7 (14-121)||(46103523-46103623)
chr7 (14-116)||(34750507-34750611)
chr7 (14-121)||(42877388-42877495)
chr7 (14-120)||(6174839-6174945)
chr7 (14-112)||(26161607-26161705)
chr7 (7-118)||(3851082-3851190)
chr7 (17-121)||(47525992-47526097)
chr7 (43-121)||(45331917-45331992)
chr7 (21-121)||(49110630-49110730)
chr7 (22-109)||(16870641-16870728)
chr7 (14-116)||(35570202-35570309)
chr7 (14-121)||(41134641-41134743)
chr7 (20-65)||(3785578-3785623)
chr7 (45-114)||(26980056-26980125)
chr7 (14-55)||(39278484-39278525)
chr7 (17-65)||(37467463-37467511)
chr7 (23-67)||(38767221-38767265)
[»] chr3 (40 HSPs)
chr3 (1-114)||(44561793-44561906)
chr3 (14-121)||(27334884-27334991)
chr3 (14-121)||(13499488-13499595)
chr3 (14-121)||(42490349-42490456)
chr3 (14-121)||(20765198-20765305)
chr3 (14-121)||(21005295-21005402)
chr3 (14-121)||(27010627-27010734)
chr3 (14-113)||(33415809-33415908)
chr3 (14-121)||(39866294-39866401)
chr3 (14-121)||(42761636-42761743)
chr3 (40-121)||(45613575-45613656)
chr3 (29-121)||(19823902-19823994)
chr3 (20-116)||(34912301-34912397)
chr3 (14-108)||(3430427-3430521)
chr3 (14-116)||(21797563-21797665)
chr3 (14-112)||(33803532-33803631)
chr3 (14-73)||(44856396-44856455)
chr3 (17-121)||(41252919-41253023)
chr3 (14-121)||(43181508-43181616)
chr3 (14-113)||(15332959-15333058)
chr3 (14-116)||(25527413-25527513)
chr3 (7-121)||(15568081-15568194)
chr3 (10-116)||(41751559-41751665)
chr3 (46-116)||(42049788-42049858)
chr3 (14-116)||(54507648-54507750)
chr3 (53-121)||(32220865-32220933)
chr3 (7-82)||(17643772-17643847)
chr3 (42-116)||(43467923-43467997)
chr3 (8-121)||(15664092-15664204)
chr3 (32-116)||(22782273-22782357)
chr3 (32-116)||(22786637-22786721)
chr3 (14-82)||(30213845-30213913)
chr3 (30-121)||(37766049-37766145)
chr3 (14-121)||(36227547-36227654)
chr3 (18-84)||(27813445-27813511)
chr3 (14-115)||(6910342-6910443)
chr3 (17-112)||(30057310-30057405)
chr3 (77-118)||(27813817-27813858)
chr3 (7-67)||(33128065-33128125)
chr3 (30-118)||(42469635-42469722)
[»] chr5 (32 HSPs)
chr5 (1-121)||(38916390-38916510)
chr5 (14-121)||(978079-978186)
chr5 (14-121)||(8086183-8086290)
chr5 (14-116)||(14634310-14634412)
chr5 (14-121)||(9502780-9502887)
chr5 (14-121)||(18094234-18094341)
chr5 (14-121)||(33387222-33387329)
chr5 (14-114)||(3472430-3472530)
chr5 (14-121)||(12007785-12007892)
chr5 (47-121)||(18598546-18598620)
chr5 (8-113)||(27579577-27579681)
chr5 (14-121)||(33587622-33587729)
chr5 (14-112)||(39776641-39776739)
chr5 (4-92)||(11251145-11251233)
chr5 (14-116)||(34111969-34112071)
chr5 (14-114)||(30355027-30355127)
chr5 (14-113)||(7224175-7224274)
chr5 (30-112)||(11785895-11785977)
chr5 (14-116)||(32017220-32017322)
chr5 (14-107)||(12456793-12456886)
chr5 (17-121)||(24992294-24992398)
chr5 (14-121)||(40156200-40156307)
chr5 (14-92)||(6996012-6996089)
chr5 (17-66)||(26387035-26387084)
chr5 (57-121)||(10696792-10696856)
chr5 (25-120)||(5947715-5947810)
chr5 (17-121)||(24916402-24916508)
chr5 (14-77)||(3422363-3422429)
chr5 (14-113)||(20692544-20692641)
chr5 (59-121)||(9050763-9050825)
chr5 (14-104)||(18998706-18998796)
chr5 (21-67)||(31197850-31197896)
[»] chr2 (33 HSPs)
chr2 (14-114)||(7799856-7799956)
chr2 (14-121)||(7608051-7608158)
chr2 (14-123)||(5404996-5405105)
chr2 (14-117)||(6223072-6223175)
chr2 (14-121)||(8042175-8042282)
chr2 (14-121)||(19141219-19141326)
chr2 (14-121)||(39358148-39358255)
chr2 (14-108)||(16865069-16865163)
chr2 (14-121)||(2183110-2183217)
chr2 (14-112)||(43444693-43444791)
chr2 (14-116)||(44365164-44365266)
chr2 (17-113)||(11931701-11931797)
chr2 (25-116)||(32774598-32774689)
chr2 (14-116)||(19262687-19262789)
chr2 (16-121)||(9006939-9007044)
chr2 (14-118)||(24251965-24252069)
chr2 (14-109)||(11841746-11841841)
chr2 (41-116)||(13598449-13598523)
chr2 (4-117)||(36072180-36072293)
chr2 (17-121)||(22839083-22839187)
chr2 (14-118)||(38291957-38292061)
chr2 (25-112)||(33607387-33607474)
chr2 (20-109)||(13117483-13117572)
chr2 (1-118)||(24093676-24093794)
chr2 (25-88)||(44644905-44644968)
chr2 (14-120)||(19165936-19166041)
chr2 (16-112)||(42133763-42133859)
chr2 (26-116)||(30548839-30548929)
chr2 (14-67)||(9172299-9172352)
chr2 (25-118)||(31904044-31904137)
chr2 (31-112)||(9553890-9553967)
chr2 (25-92)||(36177741-36177809)
chr2 (14-121)||(44563150-44563258)
[»] chr6 (38 HSPs)
chr6 (14-121)||(6563228-6563335)
chr6 (14-121)||(24624094-24624201)
chr6 (14-121)||(4147933-4148040)
chr6 (1-116)||(4440857-4440972)
chr6 (14-121)||(17257804-17257911)
chr6 (14-121)||(19088111-19088218)
chr6 (14-121)||(32414832-32414939)
chr6 (14-121)||(17213937-17214044)
chr6 (14-121)||(29790208-29790315)
chr6 (14-116)||(15383083-15383185)
chr6 (14-116)||(22054779-22054881)
chr6 (14-115)||(31569179-31569280)
chr6 (14-121)||(18668841-18668948)
chr6 (14-113)||(20226451-20226550)
chr6 (14-113)||(22120435-22120534)
chr6 (30-121)||(25475977-25476068)
chr6 (14-112)||(28477764-28477862)
chr6 (14-118)||(15337493-15337597)
chr6 (14-121)||(32671818-32671925)
chr6 (14-112)||(29693894-29693992)
chr6 (40-116)||(3989442-3989518)
chr6 (14-114)||(17155158-17155258)
chr6 (30-121)||(10520470-10520561)
chr6 (14-120)||(5495252-5495358)
chr6 (14-116)||(31869715-31869817)
chr6 (14-86)||(2360027-2360099)
chr6 (14-93)||(1040854-1040933)
chr6 (14-114)||(14214066-14214166)
chr6 (41-112)||(21540809-21540880)
chr6 (14-115)||(3623863-3623963)
chr6 (7-68)||(12226030-12226091)
chr6 (25-121)||(20437177-20437274)
chr6 (14-86)||(10298726-10298798)
chr6 (14-94)||(24955549-24955629)
chr6 (7-92)||(19240738-19240823)
chr6 (14-67)||(23158062-23158115)
chr6 (20-79)||(3321706-3321766)
chr6 (14-50)||(26567297-26567333)
[»] chr8 (31 HSPs)
chr8 (14-121)||(616785-616892)
chr8 (14-121)||(623178-623285)
chr8 (14-116)||(2766201-2766303)
chr8 (14-121)||(18044427-18044534)
chr8 (14-121)||(42587401-42587508)
chr8 (14-116)||(3100648-3100750)
chr8 (14-127)||(36642011-36642125)
chr8 (14-116)||(40494391-40494493)
chr8 (16-112)||(13216876-13216972)
chr8 (25-121)||(24524102-24524198)
chr8 (31-121)||(6414135-6414225)
chr8 (14-116)||(14237287-14237389)
chr8 (14-116)||(32998457-32998559)
chr8 (8-121)||(5878319-5878431)
chr8 (14-118)||(38957175-38957279)
chr8 (20-120)||(22489433-22489533)
chr8 (30-118)||(35403521-35403609)
chr8 (17-121)||(36167078-36167182)
chr8 (14-112)||(41263821-41263919)
chr8 (7-108)||(3370402-3370503)
chr8 (17-114)||(18090338-18090434)
chr8 (14-121)||(132019-132126)
chr8 (14-116)||(4270245-4270347)
chr8 (40-121)||(8394348-8394429)
chr8 (20-121)||(33700232-33700334)
chr8 (14-112)||(18035111-18035209)
chr8 (14-115)||(5173259-5173360)
chr8 (14-77)||(32780081-32780144)
chr8 (59-121)||(13217219-13217281)
chr8 (14-94)||(11637811-11637891)
chr8 (59-123)||(38497083-38497147)
[»] scaffold0295 (2 HSPs)
scaffold0295 (14-121)||(13870-13977)
scaffold0295 (62-121)||(9374-9433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-121)||(100800-100907)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-121)||(161990-162097)
[»] scaffold0225 (1 HSPs)
scaffold0225 (14-118)||(8986-9090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-118)||(138183-138287)
[»] scaffold0018 (1 HSPs)
scaffold0018 (14-114)||(67922-68022)
[»] scaffold0262 (1 HSPs)
scaffold0262 (14-118)||(22785-22889)
[»] scaffold0595 (1 HSPs)
scaffold0595 (14-107)||(3964-4057)
[»] scaffold0056 (1 HSPs)
scaffold0056 (17-121)||(70963-71066)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-116)||(217031-217131)


Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-141; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 349 - 650
Target Start/End: Original strand, 28031341 - 28031644
Alignment:
Q  349 aataaacatagtagaagtttcaattttgtaacatttattatgtggtctcgaattacaacgattgttgtaacttaacttggcattttatcgttctcataaa 448  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28031341 aataaacataatagaagtttcaattttgtaacatttattatgtggtctcgaattacaacgattgttgtaacttaacttggcattttatcgttctcataaa 28031440  T
Q  449 tatatctttgttttcatatttgtaattttattaaacttgatagttttagtaaatattacttggaattttattaagtattttctaacctttgagagaatat 548  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28031441 tatatctttgttttcatatttgtaattttattaaacttgatagttttagtaaatattacttggaattttattaagtattttctaacctttgagagaatat 28031540  T
Q  549 tgtataattgagcttcgttatgcatgc--nnnnnnnnnncttgttgtcttagaagtcacatatgtaaaaggcttatcacttgtagatttacgattttgta 646  Q
    |||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28031541 tgtataattgagcttcgttatgcatgcttttttcttcttcttgttgtcttagaagtcacatatgtaaaaggcttatcacttgtaaatttacgattttgta 28031640  T
Q  647 aata 650  Q
    ||||    
T  28031641 aata 28031644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 311
Target Start/End: Original strand, 28030827 - 28031134
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28030827 aatatcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 28030926  T
Q  107 ttgaaacggatggagcagctttttcttggtatcgatggccgagaatatgatgatagctaccaggacaaagatctgcatgcaaattagnnnnnnncgacta 206  Q
    |||||||| |||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||    
T  28030927 ttgaaacgtatggagcaactttttcttattatcggtggccgagaatatgatgatagctaccaggacaaagatctgcatgcaaattagtttgtttcgacta 28031026  T
Q  207 ---tggtgtgccactagtagatcaagagtggctggatcgcttatgattcattacctgccaaagtgattcttgcaccattttgaatatgtgaagactatcc 303  Q
       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28031027 tggtggtgtgccactagtagatcaagagtggctggatcacttatgattcattacctgccaaagtgattcttgcaccattttgaatatgggaagactatcc 28031126  T
Q  304 tattcttt 311  Q
    ||||||||    
T  28031127 tattcttt 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 6766481 - 6766374
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  6766481 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 6766382  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  6766381 ggagggag 6766374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 16120593 - 16120700
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  16120593 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 16120692  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  16120693 ggagggag 16120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 36757639 - 36757746
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||     
T  36757639 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaat 36757738  T
Q  114 ggatggag 121  Q
    ||||||||    
T  36757739 ggatggag 36757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 6402563 - 6402670
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  6402563 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 6402662  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  6402663 ggagggag 6402670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 11641220 - 11641327
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||     
T  11641220 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaat 11641319  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  11641320 ggagggag 11641327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 17306063 - 17305956
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  17306063 tacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 17305964  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  17305963 ggagggag 17305956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 30003642 - 30003535
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  30003642 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaac 30003543  T
Q  114 ggatggag 121  Q
    ||||||||    
T  30003542 ggatggag 30003535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 38153417 - 38153528
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    ||||| || ||| |||||| |||||||| ||||||||||||||||||||||||| || | |||||||||||| |||| ||||||||  |||||||| |||    
T  38153417 tcgaagaacatcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgaca 38153516  T
Q  101 tgtattttgaaa 112  Q
    ||||||||||||    
T  38153517 tgtattttgaaa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42735318 - 42735428
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaa---gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 110  Q
    |||||||||| |||| ||||||||| |||||||||||   |||| |||||||||||||| || |||| |||||||||||| |||  ||||||||||||||    
T  42735318 tacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaacatgtattttga 42735417  T
Q  111 aacggatggag 121  Q
    |||||||||||    
T  42735418 aacggatggag 42735428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 27292759 - 27292640
Alignment:
Q  4 aataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgt 103  Q
    ||||| ||| |||||||||| |||| ||||||||  |||||||||||||||||||||||||| ||| || |||| |||| |||||||||||   |||| |    
T  27292759 aataacatcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacatat 27292660  T
Q  104 attttgaaacggatggagca 123  Q
    ||||||||||||| ||||||    
T  27292659 attttgaaacggagggagca 27292640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 52024135 - 52024028
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| ||||| |||||||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||  |||||||||||||||||    
T  52024135 tacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 52024036  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  52024035 ggagggag 52024028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 44644510 - 44644615
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    ||||||||||||| ||||||||| || |||||||| |||  |||||||||||||||| |||||| ||||||| |||||||| ||||||||||| ||| ||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaatgg 44644609  T
Q  116 atggag 121  Q
    | ||||    
T  44644610 agggag 44644615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 48526837 - 48526936
Alignment:
Q  14 tacatgctaacatttatatttata-tgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||| |||||||||||||||||| | ||| ||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||    
T  48526837 tacatactaacatttatatttataatattaattaaaaa-tatggtcaaagtaaatcatgtaaataatgtacattgcaaaaatgcaatatctattttgaaa 48526935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 9342798 - 9342905
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||||||||||| || ||||| |||||||||||||||   |||||| |||||||||    
T  9342798 tacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgttttttgaaac 9342897  T
Q  114 ggatggag 121  Q
    ||||||||    
T  9342898 ggatggag 9342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 36399207 - 36399100
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  36399207 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 36399108  T
Q  114 ggatggag 121  Q
    ||||||||    
T  36399107 ggatggag 36399100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 40771925 - 40772032
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  40771925 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 40772024  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  40772025 ggagggag 40772032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 44647866 - 44647973
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| || |||||||| |||  ||||| |||||||||| |||||| ||||||| |||||||| ||||||||||| |||     
T  44647866 tacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaat 44647965  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  44647966 ggagggag 44647973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 24321377 - 24321261
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtata--gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgta 104  Q
    |||||| |||||||||| |||| ||||||||  ||||||||||| ||||  |||||||||| ||| || |||| |||||||||||||||| | |||||||    
T  24321377 aatatcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacatgta 24321278  T
Q  105 ttttgaaacggatggag 121  Q
    |||| ||||||| ||||    
T  24321277 ttttaaaacggagggag 24321261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 28031210 - 28031261
Alignment:
Q  315 taccaaaagcataagagaaggggaacgggtgcacaataaacatagtagaagt 366  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28031210 taccaaaagcataagagaacgggaacgggtgcacaataaacatagtagaagt 28031261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 30701827 - 30701720
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  30701827 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttgaaac 30701728  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  30701727 ggagggag 30701720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 4302227 - 4302125
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||  |||||||||||  ||  ||||||||||||| ||||||| || |||||||||||||  |||||||||| | ||||    
T  4302227 tacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaaattgaacatgtattataaaac 4302128  T
Q  114 gga 116  Q
    |||    
T  4302127 gga 4302125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 40977641 - 40977743
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||| ||||| || |||| | ||||||||||||||   |||||||||||| |||    
T  40977641 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgtattttgcaac 40977740  T
Q  114 gga 116  Q
    |||    
T  40977741 gga 40977743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 26910183 - 26910091
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    |||| ||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||    
T  26910183 catgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgtatttt 26910091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42788695 - 42788802
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||| || |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||||||   |||| ||||||||||     
T  42788695 tacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatatattttgaaat 42788794  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  42788795 ggagggag 42788802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 19711845 - 19711940
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||| || || ||||||||||||||||||||| |||||| |    |||||| ||||||| ||||| |||||||||||| | ||||||||||||||    
T  19711845 tacatgctatcacttgtatttatatgttagttaaaaaatatagtta----aagtcacgtaaatagtgcacgttgcaaaaatgcgatatgtattttgaaac 19711940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 30385298 - 30385405
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||| ||||||||||   |||| |||| ||||||||  |||| ||| ||||||||||| |||     
T  30385298 tacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacattataaaattgcgacatgtattttaaaat 30385397  T
Q  114 ggatggag 121  Q
     |||||||    
T  30385398 agatggag 30385405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 25695508 - 25695404
Alignment:
Q  15 acatgctaacatttatatttatatgttagttaaaaag---tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaa 111  Q
    |||||||||||||||||||||||| |||||||||||    ||| ||||| | |||| || | | ||||||||||||||||||||  | || |||||||||    
T  25695508 acatgctaacatttatatttatatattagttaaaaaaaaatatggtcaacgcaagtgatatgattaatgcacattgcaaaaatgtgaaatttattttgaa 25695409  T
Q  112 acgga 116  Q
    |||||    
T  25695408 acgga 25695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 3485360 - 3485459
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| |||||||| ||||||||| ||||||||||| |||  ||||||||||| |||  |||| |||| |||| |||| | | ||||||||||| ||||    
T  3485360 tacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgtattttaaaac 3485459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 31445032 - 31444925
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||| ||||||| | ||||||| ||||||||||| ||| ||||| ||| |  ||| |||||||||||| || |||| ||  ||||||||||| ||||    
T  31445032 tacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaaggtacgctatgcaaataatgcacagtgtaaaattgtgacatgtattttaaaac 31444933  T
Q  114 ggatggag 121  Q
    || |||||    
T  31444932 ggttggag 31444925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 40800540 - 40800638
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||||| |||| |||| |||||||||||  ||| |||||||||||| |||| | |||||||||||| |||| | | |||| ||||||||||    
T  40800540 tacatgctaacatttgtatt-atatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacatatattttgaaa 40800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 15382579 - 15382681
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| |||| |||| ||||||||| ||| |||||||   | |||| ||||||| |||| |||| || |||||| |||| ||| ||||||||||||||||    
T  15382579 tacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgtattttgaaac 15382678  T
Q  114 gga 116  Q
    |||    
T  15382679 gga 15382681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 34635016 - 34634914
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| |||||||| ||||||||| ||||||||||| |||  ||||| ||||| |||| || | | |||||||||||  ||| |||| ||||| |||||    
T  34635016 tacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaaaacttcacattgcaaagttgcgacatttatttagaaac 34634917  T
Q  114 gga 116  Q
    |||    
T  34634916 gga 34634914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 7568645 - 7568690
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 65  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  7568645 ctaacatttatatttatatattagttaaaaagtagagttaaagtaa 7568690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 48375111 - 48375018
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||| ||||| | || ||||||| |||||||||||||  ||||| |||||    
T  48375111 tacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaattgaacatatattt 48375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 50972794 - 50972892
Alignment:
Q  21 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtca----tgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    |||||||| ||||||||| ||| |||||||||||  |||||||||||||    ||| | || |||| ||||||||||||  ||||||| ||||||||||    
T  50972794 taacatttgtatttatatattatttaaaaagtatgttcaaagtaagtcagtcatgtgattagtgcaaattgcaaaaatgtgacatgtaatttgaaacgg 50972892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 15912521 - 15912585
Alignment:
Q  46 aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 110  Q
    ||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||||||    
T  15912521 aaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 15912585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 27984664 - 27984558
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| |||||||||| ||||  ||| ||||||||||| ||| |||||||||||  |||| |||| ||||  ||| |||| ||  ||||||||||| ||||    
T  27984664 tacaagctaacatttgtattcgtatattagttaaaaa-tatggtcaaagtaagcaatgtgaatagtgcatgttgtaaaattgtgacatgtattttaaaac 27984566  T
Q  114 ggatggag 121  Q
    ||||||||    
T  27984565 ggatggag 27984558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 52163615 - 52163677
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattg 87  Q
    |||||||||||||| ||||| ||||| |||  |||||||| ||||||| || |||||||||||    
T  52163615 atttatatttatatattagtaaaaaaatatgatcaaagtatgtcatgtcaacaatgcacattg 52163677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9881398 - 9881321
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataa 78  Q
    ||||| || ||| |||||| |||||||||||| ||||| ||||||||||| ||| || ||| ||||| |||| |||||    
T  9881398 tcgaacaacatcttacatgataacatttatatgtatatattagttaaaaattatggttaaaataagttatgtgaataa 9881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 16689917 - 16689840
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||||||| ||||||| ||| |||  ||||||||||| |||| |||| ||||||| | |||| ||| ||||||||||    
T  16689917 tatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacatcgtaaaattgctacatgtattt 16689840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 22575740 - 22575776
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaa 50  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  22575740 tacatgctaacatttgtatttatatattagttaaaaa 22575776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 9e-38; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36523108 - 36523228
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    ||||| || ||| |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  36523108 tcgaacaacatcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgaca 36523207  T
Q  101 tgtattttgaaacggatggag 121  Q
    | |||||||||||||||||||    
T  36523208 tatattttgaaacggatggag 36523228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 43967832 - 43967725
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  43967832 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgtattttgaaac 43967733  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  43967732 ggaaggag 43967725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 44232230 - 44232337
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  44232230 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaac 44232329  T
Q  114 ggatggag 121  Q
    ||||||||    
T  44232330 ggatggag 44232337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 25101826 - 25101731
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||| ||||  |||||||||||||||||||||||| |||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaatgcaacatgtattttgaaa 25101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 38416803 - 38416910
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  38416803 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 38416902  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  38416903 ggagggag 38416910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 2571029 - 2571133
Alignment:
Q  8 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||| ||| |||||| |||||||||||||  |||||||  ||||||||||    
T  2571029 atatcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattt 2571128  T
Q  108 tgaaa 112  Q
    |||||    
T  2571129 tgaaa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 5428685 - 5428584
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| || |||||||||||||  |||||||||||||||| ||||| ||||||||||| |||| |||||||||| ||||||| ||||||||||||||||    
T  5428685 tacatgatagcatttatatttat--gttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgccaaaatgcgacatgtattttgaaac 5428588  T
Q  114 ggat 117  Q
    ||||    
T  5428587 ggat 5428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 39307805 - 39307698
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| ||||||||| ||||||||| ||||||||||||||   |||||||||||||||| ||||  | | ||||||||||||| ||||||||||||||||    
T  39307805 tacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgtattttgaaac 39307706  T
Q  114 ggatggag 121  Q
    ||||||||    
T  39307705 ggatggag 39307698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 2760880 - 2760987
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  2760880 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 2760979  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  2760980 ggagggag 2760987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 26170095 - 26169988
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| ||||||||||||||||   ||||||||||||||||    
T  26170095 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 26169996  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  26169995 ggagggag 26169988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 29830452 - 29830345
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||  ||||||   ||||||||||||||||    
T  29830452 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgtattttgaaac 29830353  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  29830352 ggagggag 29830345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 35381047 - 35381154
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||   ||||||||||||||||    
T  35381047 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaac 35381146  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  35381147 ggagggag 35381154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 54330843 - 54330950
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || ||||  |||||||||||||||   |||||||||| |||||    
T  54330843 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgtatttcgaaac 54330942  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  54330943 ggagggag 54330950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 55209727 - 55209834
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||| ||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  55209727 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgtattttgaaac 55209826  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  55209827 ggagggag 55209834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 25296733 - 25296835
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   | ||||||||||||||    
T  25296733 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgtattttgaaac 25296832  T
Q  114 gga 116  Q
    |||    
T  25296833 gga 25296835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 3037099 - 3036990
Alignment:
Q  4 aataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgt 103  Q
    ||||||||  |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||| |||| | ||||||| | || | | ||||||    
T  3037099 aataatattttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgt 3037000  T
Q  104 attttgaaac 113  Q
    ||||||||||    
T  3036999 attttgaaac 3036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 12625360 - 12625260
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||| |||||||||||  |||||||||||||||||    
T  12625360 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgtattttgaaac 12625261  T
Q  114 g 114  Q
    |    
T  12625260 g 12625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 55800941 - 55800841
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  || |||||| |||||||||    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaagatgtatattgaaacgg 55800842  T
Q  116 a 116  Q
    |    
T  55800841 a 55800841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 7614724 - 7614617
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||| |||||||||| | ||||  | |||| |||| | | ||||||||||||||||    
T  7614724 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtgattaatatatattgtaaaattacgacatgtattttgaaac 7614625  T
Q  114 ggatggag 121  Q
    ||||||||    
T  7614624 ggatggag 7614617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 34652211 - 34652302
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||| ||||||||||||||||||||| ||| ||| ||||||||| |||||||| | |||||| ||||||||  |||||||||||||||||||    
T  34652211 atttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaacgga 34652302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 38721446 - 38721339
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| || |||||||| |||  ||||| |||||||||| |||||| ||||||| |||||||| ||||||||||| |||     
T  38721446 tacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaaatgcgacatgtattttaaaat 38721347  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  38721346 ggagggag 38721339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 27407773 - 27407879
Alignment:
Q  15 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    ||||||||| |||| ||||||||| ||||||||||||||  |||||||||||| |||| |||| | |||| |||||||||||  |||||||||||||| |    
T  27407773 acatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaaatgcgtcatgtattttgaaatg 27407872  T
Q  115 gatggag 121  Q
    || ||||    
T  27407873 gagggag 27407879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 37767104 - 37767218
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| ||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||| ||||||| |||| ||| ||||| ||| ||||  |||    
T  37767104 aatatcttacattctaacatttgtatttatatatacgttaaaaagtatagtcaaagtaagtcacgtaaatagtgcatatttcaaaattgcgacattcatt 37767203  T
Q  107 ttgaaacggatggag 121  Q
    || ||||||| ||||    
T  37767204 ttaaaacggagggag 37767218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 29051782 - 29051689
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    |||| ||||||||| ||||||||||| ||| |||||||||||| |||| ||||||| | |||| |||| ||||||||||||||| |||||||||    
T  29051782 atttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgtatattgtaaaattgcaacatgtattttaaaacggatg 29051689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 4467672 - 4467744
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 86  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  4467672 tacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatgcacatt 4467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 55191931 - 55191831
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    |||||||| |||| |||||| |  ||| ||||||||||||||||||||||||||  | |||| ||||||||||||||||  ||||| |||||||||||||    
T  55191931 catgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgaacatatattttgaaacgg 55191832  T
Q  116 a 116  Q
    |    
T  55191831 a 55191831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 12240331 - 12240430
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||   ||||||||||||||||    
T  12240331 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaac 12240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 35686482 - 35686383
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  35686482 tacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 35686383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 38716995 - 38716897
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  38716995 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtca-attaatagtgcacattgcaaaaattggacatgtattttgaaac 38716897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 47386439 - 47386546
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| ||||||    ||||||||||||||||    
T  47386439 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgtattttgaaac 47386538  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  47386539 ggagggag 47386546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 25918312 - 25918206
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||| ||| ||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  25918312 tacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 25918213  T
Q  114 ggatgga 120  Q
    |||||||    
T  25918212 ggatgga 25918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 31010330 - 31010224
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||||||| |||||||   | |||||||    
T  31010330 aatatcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgtatt 31010231  T
Q  107 ttgaaac 113  Q
    |||||||    
T  31010230 ttgaaac 31010224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 50205847 - 50205745
Alignment:
Q  19 gctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    ||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| |||||||| ||||||    ||||||||||||||||| |||    
T  50205847 gctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgtattttgaaacgaatg 50205748  T
Q  119 gag 121  Q
    |||    
T  50205747 gag 50205745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 30446406 - 30446307
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| |||||||||| ||||||||| ||||| ||||| ||  ||||||||||||||||| ||||||||| ||| |||| |||| ||||| ||||||||||    
T  30446406 tacaggctaacatttgtatttatatattagtcaaaaa-tagggtcaaagtaagtcatgtgaataatgcagattacaaacatgcgacatgcattttgaaac 30446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 17610389 - 17610282
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  |||| |||||| ||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||| ||||    
T  17610389 tacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttaaaac 17610290  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  17610289 ggagggag 17610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 26125817 - 26125710
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || ||||||||| |||| ||||||  ||  | |||||||||||    
T  26125817 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaattgaatttatattttgaaac 26125718  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  26125717 ggagggag 26125710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 45291941 - 45291862
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaa 93  Q
    |||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||| || |||| ||||||||| |||||    
T  45291941 tacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaaa 45291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 19433511 - 19433614
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtata----gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 109  Q
    |||||||||| |||| ||||||||   |||||||||||||||    |||||||||||||| || || | ||||||||||||||||  |||||||||||||    
T  19433511 tacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaacatgtattttg 19433610  T
Q  110 aaac 113  Q
    ||||    
T  19433611 aaac 19433614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 27755808 - 27755730
Alignment:
Q  34 tatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||||||||||| |||||| ||||| || | || |||| ||||| ||||||||| |||||||||||||||    
T  27755808 tatatgttagttaaaaagtatggtcaaaataagttatatgaacaatgtacattacaaaaatgcgacatgtattttgaaa 27755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 20875403 - 20875504
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||| |||||||| |||||||| ||||||||||| ||| |||||||||| | || | |||| ||||||||  |||| | |||||||||||||||||| ||    
T  20875403 atgcaaacatttacatttatatattagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatgtattttgaaacaga 20875502  T
Q  117 tg 118  Q
    ||    
T  20875503 tg 20875504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 23360276 - 23360180
Alignment:
Q  22 aacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||| |||| |||| ||||||||||| ||  ||||||||||||||||  |||| |||| ||||||||||||| ||||||||||||||| | ||||||    
T  23360276 aacatttgtattcatatattagttaaaaaatag-gtcaaagtaagtcatg--aatagtgcatattgcaaaaatgcgacatgtattttgaaatgaatggag 23360180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 9029595 - 9029712
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaa---aatgcaacatgt 103  Q
    |||||| ||| |||||| |||| ||||||||  ||||||||||||||| |||||||||||| | ||||||| | || ||||||||   |||   ||||||    
T  9029595 aatatcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagattgcaaaattaattggacatgt 9029694  T
Q  104 attttgaaacggatggag 121  Q
    ||||| ||||||||||||    
T  9029695 attttaaaacggatggag 9029712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 56297858 - 56297948
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    |||||||||||| ||||||||| |||||||| || ||| ||||||  |||| |||| ||||||| |||||| |||||| | ||||||||||    
T  56297858 atgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaaatacgacatgtattt 56297948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 30191619 - 30191723
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| |||||| |||||||||||||||||| || || ||||  ||     ||||||||  |||| |||| ||||||||| |||| |||||||||||||    
T  30191619 aatatcttacatgttaacatttatatttatatattcgtaaaaacata-----aaagtaagctatgtgaatagtgcacattgtaaaattgcaacatgtatt 30191713  T
Q  107 ttgaaacgga 116  Q
    ||||||||||    
T  30191714 ttgaaacgga 30191723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 34323133 - 34323076
Alignment:
Q  59 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||    
T  34323133 aaagtaagtcatgtgaataatgcacattataaaaatgcgtcatgtattttgaaacgga 34323076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 34316626 - 34316536
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    |||||||||||| ||||||||| |||||||| || |||  |||||||||||||| |||||| |||||| || |||||| | |||| ||||||    
T  34316626 atgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatatttt 34316536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 19595814 - 19595734
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 94  Q
    |||||||||| |||| ||||||||  ||||||||| ||||| || ||||||||||| || |||| |||| |||| ||||||    
T  19595814 tacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatattgtaaaaat 19595734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 10550535 - 10550434
Alignment:
Q  14 tacatgctaacatttatatttatatgttagtta--aaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaa 111  Q
    ||||||||||||||| ||||||||| |||||||  |||| ||| || |||||||  ||||| |||| |||| |||| |||| |||||||  |||||| ||    
T  10550535 tacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaattgcaacagatattttaaa 10550436  T
Q  112 ac 113  Q
    ||    
T  10550435 ac 10550434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 19903804 - 19903854
Alignment:
Q  15 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 65  Q
    |||||||||||||| ||||||||| ||||||||||  ||| ||||||||||    
T  19903804 acatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaa 19903854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 50620835 - 50620937
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||  ||||||||  |||||||||| |||| |||||||||||| | || |||| |||| ||||| |||||   |||| |||||| ||||    
T  50620835 tacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaattggacatatattttaaaac 50620934  T
Q  114 gga 116  Q
    |||    
T  50620935 gga 50620937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 40682720 - 40682627
Alignment:
Q  21 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    |||||||| ||||||||| |   ||||||||||| || ||| ||| || |||||| | ||||||||| ||||||||  ||| ||||||||||||    
T  40682720 taacatttctatttatatatcgattaaaaagtatggttaaaataaatcttgtaaacactgcacattgtaaaaatgcggcatatattttgaaacg 40682627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 36341742 - 36341622
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||| |||||||||||||||||| |||    
T  36341742 tcgaacaacatcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgaca 36341643  T
Q  101 tgtattttgaaacggatggag 121  Q
    |||||||||||||| ||||||    
T  36341642 tgtattttgaaacgaatggag 36341622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 28061668 - 28061775
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  28061668 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 28061767  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  28061768 ggagggag 28061775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 36623417 - 36623310
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  36623417 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 36623318  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  36623317 ggagggag 36623310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 47156136 - 47156029
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  47156136 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 47156037  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  47156036 ggagggag 47156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 38851993 - 38852107
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||    
T  38851993 aatatcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtatt 38852092  T
Q  107 ttgaaacggatggag 121  Q
    |||||||||| ||||    
T  38852093 ttgaaacggagggag 38852107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 41898097 - 41897990
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  41898097 tacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 41897998  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  41897997 ggagggag 41897990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42890496 - 42890603
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| |||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  42890496 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgtattttgaaac 42890595  T
Q  114 ggatggag 121  Q
    ||||||||    
T  42890596 ggatggag 42890603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 30342183 - 30342079
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| |||| |||| ||||||||  |||||||||||||||||||||||||| ||| || |||||||||||||||||||||  | |||||||||| ||||    
T  30342183 tacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaaattgatcatgtattttaaaac 30342084  T
Q  114 ggatg 118  Q
    |||||    
T  30342083 ggatg 30342079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 8683923 - 8683820
Alignment:
Q  18 tgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggat 117  Q
    |||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| |||||||   ||||||||||| ||||| ||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattttaaaacgaat 8683824  T
Q  118 ggag 121  Q
    ||||    
T  8683823 ggag 8683820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 32431511 - 32431618
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   |||| |||||||||||    
T  32431511 tacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatatattttgaaac 32431610  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  32431611 ggagggag 32431618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 40256166 - 40256064
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || ||||  |||||||||||||||   ||||||||||||||||    
T  40256166 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgtattttgaaac 40256067  T
Q  114 gga 116  Q
    |||    
T  40256066 gga 40256064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 27045564 - 27045665
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||||  ||||| |||| |  |||||| |||| |||||||||||||||||||||||    
T  27045564 atgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgtattttgaaacgga 27045663  T
Q  117 tg 118  Q
    ||    
T  27045664 tg 27045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 6766703 - 6766810
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||||||||  |||||||  ||||||||||| ||| |||||| ||||| |||| ||||||||| |||| |||| ||| ||||||||||||||||    
T  6766703 tacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgtattttgaaac 6766802  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  6766803 ggagggag 6766810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 7439012 - 7438913
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||| ||||||| || ||||||||| |||||||||||   ||||||||||||||||    
T  7439012 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgtattttgaaac 7438913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 7457875 - 7457981
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||| | || |||| |||||||||||||| |   ||||||||||||||||    
T  7457875 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagacatgtattttgaaac 7457973  T
Q  114 ggatggag 121  Q
    ||||||||    
T  7457974 ggatggag 7457981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 39130079 - 39130186
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||| |||||| || |||| ||||||||||||||||  || ||||||||| ||||    
T  39130079 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaattaaagatgtattttaaaac 39130178  T
Q  114 ggatggag 121  Q
    ||||||||    
T  39130179 ggatggag 39130186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 40090071 - 40090178
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   |||| |||||| ||||    
T  40090071 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatatattttaaaac 40090170  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  40090171 ggagggag 40090178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 42662284 - 42662194
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||| ||||||||| ||||||||||||||| |||||||||||  |||| |||||| |||||||||||| ||| |||||||||||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaaga-atgtgaataatacacattgcaaaattgcgacatgtattttgaaacgga 42662194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 48602545 - 48602438
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||| ||||||    |||||||||||||||    
T  48602545 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgtattttgaaac 48602446  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  48602445 ggagggag 48602438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 44732121 - 44732027
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||||| || |||| ||||||||||||||||  ||||||||||||    
T  44732121 tacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtatttt 44732027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 46322144 - 46322225
Alignment:
Q  40 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||| ||| ||||    
T  46322144 ttagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaatggagggag 46322225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 11502733 - 11502832
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||| | || ||||||||||||| |||||||   ||||||||||||||||    
T  11502733 tacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatgcacattacaaaaattggacatgtattttgaaac 11502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 16778614 - 16778507
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||||||| || || |||| |||||||||||||| |   ||||||||||||||||    
T  16778614 tacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgtattttgaaac 16778515  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  16778514 ggagggag 16778507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 20885212 - 20885105
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| | ||||||| ||||||   ||||||||||||||||    
T  20885212 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtattttgaaac 20885113  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  20885112 ggagggag 20885105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 35117234 - 35117128
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||  |||||||||| |||| |||||||||||||| || |||| |||| |||||||||||  |||| ||||||| ||||    
T  35117234 tacatgctaatatttatatttatacattagttaaaa-gtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattgaacaggtattttaaaac 35117136  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  35117135 ggagggag 35117128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 7169224 - 7169130
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgg 119  Q
    |||| ||||||||| ||||||||||| |||||||||||||| |||||| ||||   |||||||||||| |   ||||||||||||||||||||||    
T  7169224 atttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtattttgaaacggatgg 7169130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 4131656 - 4131760
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||| || ||||||||| |||| |||| |  |||||| |||| ||| |||| |||||||||||    
T  4131656 tacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatattttgaaac 4131755  T
Q  114 ggatg 118  Q
    |||||    
T  4131756 ggatg 4131760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 46479938 - 46479838
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| | | |||||||||||||| |  |||| ||||||||| ||||||  |||||||||||||||||    
T  46479938 tacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgtattttgaaac 46479839  T
Q  114 g 114  Q
    |    
T  46479838 g 46479838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 5529130 - 5529016
Alignment:
Q  4 aataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgt 103  Q
    ||||| ||| ||||||||||||||| ||||| ||| ||||||||||| |||||||||| |||   | ||||||| || |||||| |||| |   ||||||    
T  5529130 aataacatcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatgt 5529031  T
Q  104 attttgaaacggatg 118  Q
    |||||||||||||||    
T  5529030 attttgaaacggatg 5529016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 36585218 - 36585116
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  |||||| |||||||| || ||| ||||||| || |||| ||||||||||||||||   | ||||||||||||||    
T  36585218 tacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaac 36585119  T
Q  114 gga 116  Q
    |||    
T  36585118 gga 36585116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 2952521 - 2952424
Alignment:
Q  25 atttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||||||||  |||||||||||  ||| |||||||||||  | || |||||||||| ||| |||| ||||||| ||||||||||||||||||||    
T  2952521 atttatatttataaattagttaaaaaaatatggtcaaagtaagctacgtgaataatgcacgttgtaaaattgcaacacgtattttgaaacggatggag 2952424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 25566702 - 25566802
Alignment:
Q  15 acatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    ||||||||| |||| |||| |||  ||||||| ||||||| |||||||||||||| || |||| ||||||||| ||||||   |||||||||||||||||    
T  25566702 acatgctaatatttgtatt-atacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaacg 25566800  T
Q  115 ga 116  Q
    ||    
T  25566801 ga 25566802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 46103523 - 46103623
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||       | ||||||||| ||||||   ||||||||||||||||    
T  46103523 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtca-------agtgcacattgtaaaaattggacatgtattttgaaac 46103615  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  46103616 ggagggag 46103623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 34750611 - 34750507
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgt-aaataatgcacattgcaaaaatgcaacatgta-ttttgaa 111  Q
    |||||| |||||||| ||||| ||| ||||||||||||||  ||||||||||||||||| ||||| | |||  |||||||||| ||||| || |||||||    
T  34750611 tacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaaatagttcacgatgcaaaaatgtaacatttatttttgaa 34750512  T
Q  112 acgga 116  Q
    |||||    
T  34750511 acgga 34750507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 42877495 - 42877388
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| |||| |||| ||||||||  ||||||||||||||| |||||||||||| |  | |||| |||||||| ||||| |   ||||||||||||||||    
T  42877495 tacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgtattttgaaac 42877396  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  42877395 ggagggag 42877388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 6174945 - 6174839
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||  ||| ||||||||  ||||||||||| ||| |||| |||||||||  | |||| ||||| ||||||||||   |||| |||||||||||    
T  6174945 tacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatattttgaaac 6174846  T
Q  114 ggatgga 120  Q
    |||||||    
T  6174845 ggatgga 6174839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 26161705 - 26161607
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||| |||| ||||||||| |||||||||||| || |||||| ||| |||||| |||| ||| ||||  | |||||  |||||||||||||||    
T  26161705 tacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcattatacaaatgtgacatgtattttgaaa 26161607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 3851190 - 3851082
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| ||| || ||| |||| ||||||||  ||||||||||||||| |||||||||||||| ||    ||||||||||||||||||   |||| ||||    
T  3851190 aatatcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaagtaagtcaagt---gaatgcacattgcaaaaattggacatatatt 3851094  T
Q  107 ttgaaacggatg 118  Q
    |||| |||||||    
T  3851093 ttgagacggatg 3851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 47525992 - 47526097
Alignment:
Q  17 atgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    |||||||||||| ||||||||| |||||| ||||| |||  ||||||||||  | |||||||||||| | || |||| ||| |||| |||||| ||||||    
T  47525992 atgctaacatttgtatttatatattagttaaaaaaatatgatcaaagtaagctaggtaaataatgcataatgtaaaattgcgacatatattttaaaacgg 47526091  T
Q  116 atggag 121  Q
    ||||||    
T  47526092 atggag 47526097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 45331992 - 45331917
Alignment:
Q  43 gttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||| ||| ||||||||||||||| | ||||||||| |||||||||||   |||||| |||||||||||| ||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaaat---acatgtgttttgaaacggagggag 45331917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 49110630 - 49110730
Alignment:
Q  21 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgga 120  Q
    |||||||| |||| |||| ||||||||||| ||| |||||||||| |||| | |||| | ||||||  |||| ||  ||||||||||| |||||||||||    
T  49110630 taacatttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacattataaaattgtgacatgtattttaaaacggatgga 49110729  T
Q  121 g 121  Q
    |    
T  49110730 g 49110730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 16870641 - 16870728
Alignment:
Q  22 aacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 109  Q
    ||||||||||||||||| |||||||| || ||| |||||||||||| || | |||| |||| |||| ||||  || ||||||||||||    
T  16870641 aacatttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatgtattttg 16870728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 35570202 - 35570309
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaag-----tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    |||||||||| |||| ||||| ||| |||||||||||      ||| ||||||||||||  ||| |||| ||||||||| |||| ||| |||||||||||    
T  35570202 tacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgacatgtatttt 35570301  T
Q  109 gaaacgga 116  Q
    ||||||||    
T  35570302 gaaacgga 35570309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 41134641 - 41134743
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  |||||||     ||| ||||||||||||||  | |||| | ||||||| ||||||  |||||||||||| ||||    
T  41134641 tacatgctaatatttgtatttatacattagtta-----tatggtcaaagtaagtcaaatgaatagtacacattgtaaaaattgaacatgtattttaaaac 41134735  T
Q  114 ggatggag 121  Q
    ||||||||    
T  41134736 ggatggag 41134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 3785623 - 3785578
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 65  Q
    ||||||||| ||||||||| ||||||||||| ||| ||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaa 3785578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 26980125 - 26980056
Alignment:
Q  45 taaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    |||||| ||| |||||| ||||| |||| ||||||||| |||  |||| |||||||| ||||||||||||    
T  26980125 taaaaaatatggtcaaaataagttatgtgaataatgcatattataaaattgcaacatttattttgaaacg 26980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 39278484 - 39278525
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtata 55  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  39278484 tacatactaacatttatatttatatattagttaaaaaatata 39278525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 37467463 - 37467511
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaa 65  Q
    |||||||||||| ||||||||| ||||||||||| ||| || |||||||    
T  37467463 atgctaacatttgtatttatatattagttaaaaaatatggttaaagtaa 37467511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 38767221 - 38767265
Alignment:
Q  23 acatttatatttatatgttagttaaaaagtatagtcaaagtaagt 67  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||    
T  38767221 acatttgtatttatatattagttaaaaaatatggtcaaagtaagt 38767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44561906 - 44561793
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    ||||| || ||| ||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||    
T  44561906 tcgaacaacatcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaacatgcaaca 44561807  T
Q  101 tgtattttgaaacg 114  Q
    ||||||||||||||    
T  44561806 tgtattttgaaacg 44561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 27334884 - 27334991
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  27334884 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 27334983  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  27334984 ggaaggag 27334991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 13499488 - 13499595
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  13499488 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 13499587  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  13499588 ggagggag 13499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42490349 - 42490456
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  42490349 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 42490448  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  42490449 ggagggag 42490456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 20765305 - 20765198
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  20765305 tacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 20765206  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  20765205 ggagggag 20765198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 21005402 - 21005295
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||| ||| ||||||||||| |||||||||||| | || |||| ||||| ||||||||||  |||||||||||||||||    
T  21005402 tacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaac 21005303  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  21005302 ggagggag 21005295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 27010627 - 27010734
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  27010627 tacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 27010726  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  27010727 ggagggag 27010734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 33415908 - 33415809
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  ||||||| |||||||||||||||   ||||||||||||||||    
T  33415908 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgtattttgaaac 33415809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 39866294 - 39866401
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||| ||||    
T  39866294 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaac 39866393  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  39866394 ggagggag 39866401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42761636 - 42761743
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  42761636 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 42761735  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  42761736 ggagggag 42761743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 45613656 - 45613575
Alignment:
Q  40 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||   ||||| ||||||||||||||||||    
T  45613656 ttagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggacatgaattttgaaacggatggag 45613575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 19823994 - 19823902
Alignment:
Q  29 atatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  19823994 atatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagggag 19823902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 34912301 - 34912397
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||||||    
T  34912301 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacgga 34912397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 3430427 - 3430521
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    |||||||||| |||| |||| |||| ||||||||||| ||| |||||||||||| || |||||| ||||||||| |||| |||||||||||||||    
T  3430427 tacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaattgcaacatgtatttt 3430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 21797665 - 21797563
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||| ||| ||| || |||| ||||||||||||||||   ||||||||||||||||    
T  21797665 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 21797566  T
Q  114 gga 116  Q
    |||    
T  21797565 gga 21797563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 33803631 - 33803532
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaa-gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||| ||||| |||||||||||||  ||||||||||| |||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||    
T  33803631 tacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 33803532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 44856455 - 44856396
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgta 73  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  44856455 tacatactaacatttgtatttatatgttagttaaaaagtatagttaaagtaagtcatgta 44856396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 41252919 - 41253023
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||||||||||| ||||||||| ||||||||||| ||| || ||||||||  || | |||| ||||||||| |||| ||| |||| ||||||||||| ||    
T  41252919 atgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatattttgaaacaga 41253018  T
Q  117 tggag 121  Q
    |||||    
T  41253019 tggag 41253023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 43181508 - 43181616
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaa-gtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||| |||| |||||||||||||  ||||||||||| |||| |||||||||| ||| || |||| |||||||| | |||||  |||||||||||| |||    
T  43181508 tacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaattaaacatgtatttttaaa 43181607  T
Q  113 cggatggag 121  Q
    |||||||||    
T  43181608 cggatggag 43181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 15332959 - 15333058
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| | | ||||||| |||  |||| |||| ||||||||| |||| ||| ||||||||||| ||||    
T  15332959 tacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatgtattttaaaac 15333058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 25527513 - 25527413
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||| | ||||||||| ||| ||| ||||||||||||| ||||   |||||||||||||||| |||||||||| |||||    
T  25527513 tacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaatat--cacattgcaaaaatgcgacatgtatttcgaaac 25527416  T
Q  114 gga 116  Q
    |||    
T  25527415 gga 25527413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 15568081 - 15568194
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| |||| | |||||||| ||||||||| ||||||||||| |||  ||||| |||   ||||||||||||||||||| |||| ||| |||| ||||    
T  15568081 aatatcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaactatgtaaataatgcacattgtaaaattgcgacat-tatt 15568179  T
Q  107 ttgaaacggatggag 121  Q
    ||||||| |||||||    
T  15568180 ttgaaacagatggag 15568194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 41751559 - 41751665
Alignment:
Q  10 atcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 109  Q
    |||||| |||||||||||| ||||||||| ||||||||||| |||  |||||||| || ||||||||| | || |||| |||| || ||||| ||||| |    
T  41751559 atcgtaaatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtatgttatgtaaatattacatattgtaaaattgtaacatatatttcg 41751658  T
Q  110 aaacgga 116  Q
    |||||||    
T  41751659 aaacgga 41751665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 42049858 - 42049788
Alignment:
Q  46 aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||| ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||||| ||||||    
T  42049858 aaaaaatatagtcaaagtatgtcatgtaaattgtgcacattgcaaaaatgcggcatgtattttggaacgga 42049788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 54507750 - 54507648
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| || | ||||||||  |||||||||||||||| ||||| ||||||| || |||| |||| |||||||||||   | ||||||||||||||    
T  54507750 tacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtattttgaaac 54507651  T
Q  114 gga 116  Q
    |||    
T  54507650 gga 54507648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 32220933 - 32220865
Alignment:
Q  53 atagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||||||||||| || |||| | ||||||||||||||  |||||||||||| ||||||||||||    
T  32220933 atagtcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttaaaacggatggag 32220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 17643847 - 17643772
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgca 82  Q
    |||||| ||||||||||||||| |||||| || ||||||||||| |||||||| ||||| | |||| |||||||||    
T  17643847 aatatcttacatgctaacatttgtatttacatattagttaaaaaatatagtcacagtaaattatgttaataatgca 17643772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 43467923 - 43467997
Alignment:
Q  42 agttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||||||||| |||||||||||||| || |||| | ||||||||||||||    ||||||||||||||||||    
T  43467923 agttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgtattttgaaacgga 43467997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 15664092 - 15664204
Alignment:
Q  8 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||| |||||  |||||||| ||||||||| ||| ||||||| |||  ||||| ||||  ||||||||||||||||||| |||| ||| |||  |||||    
T  15664092 atatcttacatagtaacatttgtatttatatattaattaaaaaatatgatcaaattaagctatgtaaataatgcacattgtaaaattgcgaca-ctattt 15664190  T
Q  108 tgaaacggatggag 121  Q
    |||||| |||||||    
T  15664191 tgaaactgatggag 15664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 22782357 - 22782273
Alignment:
Q  32 tttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||| ||||||||||| || ||||||||||||  |||| |||| ||||||||  |||| ||| ||||||| |||||||||||    
T  22782357 tttatattttagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacgga 22782273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 22786721 - 22786637
Alignment:
Q  32 tttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||| ||||||||||| || ||||||||||||  |||| |||| ||||||||  |||| ||| ||||||| |||||||||||    
T  22786721 tttatatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttgaaacgga 22786637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 30213913 - 30213845
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgca 82  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||| ||||||| || |||| ||||    
T  30213913 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 37766145 - 37766049
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaa-----gtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||| ||||||||||||||||||| |||||||     |||| |||||| |||| ||||||||||||| |||  || |||||||||||| ||||||||    
T  37766145 tattcatatgttagttaaaaagtacagtcaaattatagtaaatcatgttaatagtgcacattgcaaatatgagacgtgtattttgaaatggatggag 37766049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 36227654 - 36227547
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||| || |||| ||| ||||||||||||||  | |||| ||| ||||||||||||  |||||| ||||| ||||    
T  36227654 tacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaaattgaacatgcattttaaaac 36227555  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  36227554 ggagggag 36227547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 27813445 - 27813511
Alignment:
Q  18 tgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcaca 84  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||| ||||  |||| |||| ||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 6910443 - 6910342
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| || ||||||||||| || |||| || |||||| |||| |   ||||||||||||||||    
T  6910443 tacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgtattttgaaac 6910344  T
Q  114 gg 115  Q
    ||    
T  6910343 gg 6910342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 30057405 - 30057310
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||   ||||||| ||||||||||| ||| || |||||| || |||| ||||||| || |||  ||||| | |||||||||||||||    
T  30057405 atgctaacatttgcttttatatattagttaaaaaatatggttaaagtatgttatgtgaataatgaacgttgtcaaaatactacatgtattttgaaa 30057310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 27813817 - 27813858
Alignment:
Q  77 aatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    ||||||||||| |||| |||||||||||||||||||| ||||    
T  27813817 aatgcacattgtaaaattgcaacatgtattttgaaacagatg 27813858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33128065 - 33128125
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 67  Q
    |||||| |||||| ||| |||||||||||| | |||||||||||||||  ||||| |||||    
T  33128065 aatatcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataagt 33128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 42469635 - 42469722
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    |||||| || ||| ||||||| ||  || ||| ||||||| || |||||||| ||||| |||||||| ||||||||||| |||||||||    
T  42469635 tatttacatattaattaaaaaatacggttaaattaagtcacgtgaataatgcgcattgaaaaaatgcgacatgtatttt-aaacggatg 42469722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38916390 - 38916510
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    |||||||| |||  |||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||| |||| | ||||||||||| |||    
T  38916390 tcgaataacatctcacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgaca 38916489  T
Q  101 tgtattttgaaacggatggag 121  Q
    |||||||||||||||| ||||    
T  38916490 tgtattttgaaacggagggag 38916510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 978186 - 978079
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  978186 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 978087  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  978086 ggagggag 978079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 8086183 - 8086290
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  8086183 tacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 8086282  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  8086283 ggagggag 8086290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 14634310 - 14634412
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| || | || ||||||||||||||||   ||||||||||||||||    
T  14634310 tacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgtattttgaaac 14634409  T
Q  114 gga 116  Q
    |||    
T  14634410 gga 14634412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 9502780 - 9502887
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||  |||||||||||| ||||    
T  9502780 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgtattttaaaac 9502879  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  9502880 ggagggag 9502887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 18094234 - 18094341
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  |||||||||||||||| | ||||||||| | || |||||||||||||||||||||  |||||||||||||||||    
T  18094234 tacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgtattttgaaac 18094333  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  18094334 ggagggag 18094341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 33387329 - 33387222
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| || |||| ||||||||||||||||   ||||||||||| |||     
T  33387329 tacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaaaat 33387230  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  33387229 ggagggag 33387222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 3472430 - 3472530
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| |||||||   ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||    
T  3472430 tacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaac 3472529  T
Q  114 g 114  Q
    |    
T  3472530 g 3472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 12007785 - 12007892
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||| ||||| ||||||||| ||| ||||||||||  |||||| ||||||||||||||| |||||| |  |||||||| ||||||||||||||||    
T  12007785 tacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgtattttgaaac 12007884  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  12007885 ggagggag 12007892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 18598620 - 18598546
Alignment:
Q  47 aaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacagatggag 18598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 27579577 - 27579681
Alignment:
Q  8 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||| | |||||| |||||  ||||||||  ||||||||||    
T  27579577 atatcttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtcat-tgaataatacacatcacaaaaatgtgacatgtattt 27579675  T
Q  108 tgaaac 113  Q
    ||||||    
T  27579676 tgaaac 27579681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 33587622 - 33587729
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| ||||||||||||||  | |||||||||||||||||||||   ||||||||||||||||    
T  33587622 tacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaac 33587721  T
Q  114 ggatggag 121  Q
     |||||||    
T  33587722 agatggag 33587729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 39776739 - 39776641
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||| ||||| |||| |||| || ||||||||||||| | | |||||||||||||    
T  39776739 tacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaaatacgaaatgtattttgaaa 39776641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 11251233 - 11251145
Alignment:
Q  4 aataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 92  Q
    ||||| |||||||||||||| |||| ||||||||  ||||||||||||||| |||||| ||||||| || |||| ||||||||||||||    
T  11251233 aataacatcgtacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 11251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 34112071 - 34111969
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||| ||||| |||||||||||||||||| || |||| |||||||||||||||    ||||||||||||||||    
T  34112071 tacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttgaaac 34111972  T
Q  114 gga 116  Q
    |||    
T  34111971 gga 34111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 30355027 - 30355127
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| |||||||||| |||| || ||||||| ||| || |||| |||| |||||||||||   ||||||||||||||||    
T  30355027 tacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 30355126  T
Q  114 g 114  Q
    |    
T  30355127 g 30355127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 7224274 - 7224175
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||| ||||||| ||||||||||||||  |||||| | |||||||||||||   |||||||||||| ||||    
T  7224274 tacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaaaatgaacatgtattttaaaac 7224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 11785895 - 11785977
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||  |||||||||||||||  ||||||||||||| || |||| | ||||||||||||||  ||||||||||||||||    
T  11785895 tatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttgaaa 11785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 32017322 - 32017220
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| |||  ||||||||||| |||| |||| |||||||   |||| |||  |||||||||| ||||    
T  32017322 tacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacatcataaaattgcgtcatgtattttaaaac 32017223  T
Q  114 gga 116  Q
    |||    
T  32017222 gga 32017220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 12456793 - 12456886
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||| ||||||||| ||||| ||| ||||||||||| |||  | ||||||||| ||||||||| ||||||||| |||| ||||| ||||||||    
T  12456793 tacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaattgcaatatgtattt 12456886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 24992294 - 24992398
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||| |||| ||||||||  ||||||||||| ||| |||||||||||  |||| |||| ||||||||| |||| |   |||||||||||||||||||    
T  24992294 atgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgtattttgaaacgga 24992393  T
Q  117 tggag 121  Q
     ||||    
T  24992394 gggag 24992398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 40156307 - 40156200
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||| ||||||| ||| || ||||||||||| || |||| |||||||||||||| |   | ||||||||||||||    
T  40156307 tacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgtattttgaaac 40156208  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  40156207 ggagggag 40156200  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 6996089 - 6996012
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 92  Q
    |||||| |||||||||||||||||| ||||||||||| |||||| ||| ||||| |||| |||| |||||||| |||||    
T  6996089 tacatggtaacatttatatttatatattagttaaaaaatatagttaaa-taagttatgtgaatagtgcacattacaaaa 6996012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 26387035 - 26387084
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaag 66  Q
    |||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  26387035 atgctaacatttatatttatatgttagttaaaaaatatgatcaaagtaag 26387084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 10696856 - 10696792
Alignment:
Q  57 tcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||||||||| | |||| ||||||||||||||  || || |||||||||||||||||||||    
T  10696856 tcaaagtaagtcatatgaatagtgcacattgcaaaatagcgacgtgtattttgaaacggatggag 10696792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 5947715 - 5947810
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgga 120  Q
    |||| |||||||||||||| |||||| ||| |||||||||||| |||| ||||||| | || |  ||||||  ||||||||||| ||| |||||||    
T  5947715 atttgtatttatatgttagctaaaaaatattgtcaaagtaagttatgtgaataatgtatatcgtgaaaatgtgacatgtattttaaaatggatgga 5947810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 24916402 - 24916508
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtata--gtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    ||||||| |||| ||||||||  |||||||||||  |||  |||||||||||  |||| |||| | ||||||| |||| ||  |||||||||||||||||    
T  24916402 atgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgacatgtattttgaaacg 24916501  T
Q  115 gatggag 121  Q
    |||||||    
T  24916502 gatggag 24916508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 3422363 - 3422429
Alignment:
Q  14 tacatgctaacatttatatttatatgttagtt---aaaaagtatagtcaaagtaagtcatgtaaata 77  Q
    ||||||||||||||| ||||||||| ||||||   ||||| |||||||||||||||| |||| ||||    
T  3422363 tacatgctaacatttgtatttatatattagttaaaaaaaaatatagtcaaagtaagttatgtgaata 3422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 20692544 - 20692641
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| |||||||||  | |||||||||||| |||||| || |||| ||  |||||||||||||||||||||  || |||||||| ||||    
T  20692544 tacatgttaatatttgtatttatat--tggttaaaaagtatggtcaaaatacgtcaagtggataatgcacattgcaaaaatgtgacgtgtattttaaaac 20692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 9050763 - 9050825
Alignment:
Q  59 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||| | || |||| ||||| ||||||||||  |||||||||||||||||||| ||||    
T  9050763 aaagtaagttaagtgaatagtgcacgttgcaaaaattgaacatgtattttgaaacggagggag 9050825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 18998796 - 18998706
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgta 104  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||| || |||||||   |||| |||||||||  ||| |||| ||| |||||||    
T  18998796 tacatactaacatttgtatttatatattagttaaaaaatatggttaaagtaaactatgtgaataatgcatgttgtaaaattgcgacatgta 18998706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 31197850 - 31197896
Alignment:
Q  21 taacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 67  Q
    |||||||| ||||||||| ||||||||||| ||| ||||||||||||    
T  31197850 taacatttgtatttatattttagttaaaaattattgtcaaagtaagt 31197896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 7799956 - 7799856
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  7799956 tacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttgaaac 7799857  T
Q  114 g 114  Q
    |    
T  7799856 g 7799856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 7608158 - 7608051
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  7608158 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 7608059  T
Q  114 ggatggag 121  Q
    ||||||||    
T  7608058 ggatggag 7608051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 5405105 - 5404996
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  5405105 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 5405006  T
Q  114 ggatggagca 123  Q
    ||| ||||||    
T  5405005 ggagggagca 5404996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 6223175 - 6223072
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  6223175 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 6223076  T
Q  114 ggat 117  Q
    ||||    
T  6223075 ggat 6223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 8042175 - 8042282
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  8042175 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 8042274  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  8042275 ggagggag 8042282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 19141219 - 19141326
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  19141219 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 19141318  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  19141319 ggagggag 19141326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 39358255 - 39358148
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  39358255 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 39358156  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  39358155 ggagggag 39358148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 16865163 - 16865069
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatttt 108  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | |||| || | |||| |||||||| |||||||||||    
T  16865163 tacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtcatatgaatattgtatattgtaaaaatgcgacatgtatttt 16865069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 2183110 - 2183217
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| |||| |||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  2183110 tacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 2183209  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  2183210 ggagggag 2183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 43444693 - 43444791
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| ||||||| || | |||| |||||||||||||| |||| ||| |||||||||||||||    
T  43444693 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttgaaa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 44365266 - 44365164
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||||||||    
T  44365266 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 44365167  T
Q  114 gga 116  Q
    |||    
T  44365166 gga 44365164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 11931797 - 11931701
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||||||||||| || | ||||||||| |||| |||| ||| ||||||||||||||||    
T  11931797 atgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtattttgaaac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 32774689 - 32774598
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||  |||| |  ||||||||||||||||||||    
T  32774689 atttatatgtatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattataaaacttgaacatgtattttgaaacgga 32774598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 19262789 - 19262687
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||| |  |||||| ||||||||| ||||||   ||||||||||||||||    
T  19262789 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttgaaac 19262690  T
Q  114 gga 116  Q
    |||    
T  19262689 gga 19262687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 9006939 - 9007044
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    ||||||||||||| ||||||||  ||||||||||| ||| |||||||||||  |  | |||||||||||||| |||| ||| ||||||||||||||| ||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaatgg 9007038  T
Q  116 atggag 121  Q
    ||||||    
T  9007039 atggag 9007044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 24252069 - 24251965
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||| ||||| |||| |||||| || |||| |||| ||  | ||||||||||||||    
T  24252069 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgtattttgaaac 24251970  T
Q  114 ggatg 118  Q
    |||||    
T  24251969 ggatg 24251965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 11841746 - 11841841
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 109  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||    
T  11841746 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgtattttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 13598523 - 13598449
Alignment:
Q  41 tagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    |||||||||||||| ||||||||||||||| | |||| ||||||||| ||||||||||||| |||||| |||||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattg-aaaaatgcaacatatattttaaaacgga 13598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 36072293 - 36072180
Alignment:
Q  4 aataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgt 103  Q
    ||||| ||| |||||||||| |||||||||||||  ||||||||||| |||  |||||||||||||  | |||| |||| |||| ||||||   ||||||    
T  36072293 aataacatcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgt 36072194  T
Q  104 attttgaaacggat 117  Q
    ||||||||| ||||    
T  36072193 attttgaaatggat 36072180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 22839083 - 22839187
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||||||||  ||||||||  |||||||||| ||| |||||||||||| |||| |||| |||||||||||||  || || || |||||||||| |||    
T  22839083 atgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaatttgtaaaatatattttgaaatgga 22839182  T
Q  117 tggag 121  Q
     ||||    
T  22839183 aggag 22839187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 38292061 - 38291957
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| |||||||| |||||||||  |||||||||| ||| |||||||||||| || | |||||||||  ||| |||| ||||  |||||||| |||||    
T  38292061 tacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagttatctgaataatgcatgttgtaaaattgcactatgtatttggaaac 38291962  T
Q  114 ggatg 118  Q
    |||||    
T  38291961 ggatg 38291957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 33607474 - 33607387
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||| ||||||||  |||||||||||||||| |||||||||||||  | |||| ||||||||| ||||||   |||||||||||||||    
T  33607474 atttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 13117483 - 13117572
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttg 109  Q
    |||| |||||||||||||| | ||||||||| ||| |||||||||||| || |||| | ||||||| | || |||| |||||||||||||    
T  13117483 ctaatatttatatttatatatcagttaaaaaatatggtcaaagtaagttatataaacagtgcacatggtaagaatgtaacatgtattttg 13117572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24093676 - 24093794
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgc-aaaaatgcaa 98  Q
    ||||| || ||| ||||||||||||||| |||| ||||||||||| ||||||||| |||||||||| ||||   ||||  |||||| || |||||| | |    
T  24093676 tcgaacaacatcttacatgctaacatttgtatt-atatgttagttaaaaaagtatggtcaaagtaaatcatacgaatagcgcacatcgcaaaaaatacga 24093774  T
Q  99 catgtattttgaaacggatg 118  Q
    |||||||||||||| |||||    
T  24093775 catgtattttgaaatggatg 24093794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 44644968 - 44644905
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgc 88  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||  | |||| ||||||||||    
T  44644968 atttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 19165936 - 19166041
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||||| || ||||||||| ||| |||||||  ||  |||||  ||||||||| |||| ||||||||||||||| || |||| |||||| ||||    
T  19165936 tacatgataacaattgtatttatatattaattaaaaaccatgatcaaaacaagtcatgtgaata-tgcacattgcaaaaacgcgacatatattttaaaac 19166034  T
Q  114 ggatgga 120  Q
    |||||||    
T  19166035 ggatgga 19166041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 42133859 - 42133763
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||| ||||||||| ||||||||||| |||  |||||||||   || | |||| ||||||||  |||| | | |||||||||||||||    
T  42133859 catgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtattttgaaa 42133763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 30548929 - 30548839
Alignment:
Q  26 tttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||||||||| || |||||||| ||| ||||| |||| |  ||||||||||||| ||||  ||| ||  ||||||| |||||||||||    
T  30548929 tttatatttatatattggttaaaaaatatggtcaacgtaatttgtgtaaataatgcatattgttaaattgtgacatgtaatttgaaacgga 30548839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 9172299 - 9172352
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 67  Q
    ||||||||||| ||| ||||||||  ||||||||||| ||| ||||||||||||    
T  9172299 tacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagt 9172352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 31904044 - 31904137
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    |||||||||||||| ||||||||||| ||| |||| ||||||  |||| |||| || ||| |  |||| ||| | ||||||||| |||||||||    
T  31904044 atttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtgtacagtataaaattgcgatatgtattttaaaacggatg 31904137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 9553890 - 9553967
Alignment:
Q  31 atttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||| ||||||||||| |   |||||||||||| ||    |||||| |||||| |||||||| |||||||||||||||    
T  9553890 atttatatattagttaaaaaatgcggtcaaagtaagttat----ataatgtacattgtaaaaatgcgacatgtattttgaaa 9553967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 36177741 - 36177809
Alignment:
Q  25 atttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 92  Q
    |||| ||||||||| |||||| ||||| ||| |||||| ||| |||||| |||||||| ||||||||||    
T  36177741 atttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaa 36177809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 44563150 - 44563258
Alignment:
Q  14 tacatgctaacatttatatttatatgttagtt-aaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||||||||||| | ||||||||| ||| || ||||| |||  ||||||||||| || | |||| |||| |||  |||| ||| ||||||| ||| |||    
T  44563150 tacatgctaacatatgtatttatatattaattaaaaaaatatgatcaaagtaagttatatgaatagtgcatattataaaattgcgacatgtaatttaaaa 44563249  T
Q  113 cggatggag 121  Q
    |||||||||    
T  44563250 cggatggag 44563258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 6563335 - 6563228
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||||    
T  6563335 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttgaaac 6563236  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  6563235 ggagggag 6563228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 24624094 - 24624201
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||  |||||||||||||||||    
T  24624094 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaac 24624193  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  24624194 ggagggag 24624201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 4148040 - 4147933
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  4148040 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 4147941  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  4147940 ggagggag 4147933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4440972 - 4440857
Alignment:
Q  1 tcgaataatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaaca 100  Q
    ||||| || ||| ||||||||||||||| |||||||||||||  |||||||||| |||||||||||| || | |||| |||||||| |||||||||||||    
T  4440972 tcgaacaacatcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattacaaaaatgcaaca 4440873  T
Q  101 tgtattttgaaacgga 116  Q
    | ||||||||||||||    
T  4440872 tatattttgaaacgga 4440857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 17257804 - 17257911
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||| ||  ||||||||||||||| |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  17257804 tacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgtattttgaaac 17257903  T
Q  114 ggatggag 121  Q
     |||||||    
T  17257904 agatggag 17257911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 19088111 - 19088218
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||| | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  19088111 tacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 19088210  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  19088211 ggagggag 19088218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 32414832 - 32414939
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  32414832 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgtattttgaaac 32414931  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  32414932 ggagggag 32414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 17213937 - 17214044
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||  | |||| ||||||||||||||||   |||||||||||||||     
T  17213937 tacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgtattttgaaat 17214036  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  17214037 ggagggag 17214044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 29790315 - 29790208
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| ||| ||||||||||||| |||| |  ||||||||||| ||| ||||||||||||||||    
T  29790315 tacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtattttgaaac 29790216  T
Q  114 ggatggag 121  Q
     |||||||    
T  29790215 agatggag 29790208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 15383083 - 15383185
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| || |||||||||||  | |||||||||||||||||||||   ||||||||||||||||    
T  15383083 tacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttgaaac 15383182  T
Q  114 gga 116  Q
    |||    
T  15383183 gga 15383185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 22054881 - 22054779
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| |||| |||||||||||   ||||||||||||||||    
T  22054881 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaac 22054782  T
Q  114 gga 116  Q
    |||    
T  22054781 gga 22054779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 31569179 - 31569280
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||| |||| |||| ||||||||  ||| | |||||||||||||||||||||||| || |||||||||||||||||||||   ||||||||||||||||    
T  31569179 tacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaac 31569278  T
Q  114 gg 115  Q
    ||    
T  31569279 gg 31569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 18668841 - 18668948
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| ||||||| |||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  18668841 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 18668940  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  18668941 ggagggag 18668948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 20226451 - 20226550
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  20226451 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaac 20226550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 22120435 - 22120534
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| ||||||||||||||||   ||||||||||||||||    
T  22120435 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttgaaac 22120534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 25475977 - 25476068
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||  ||||||||||||||  |||||||||||||| || |||||||||||||||||||||   ||||||||||||||||||| ||||    
T  25475977 tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggagggag 25476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 28477862 - 28477764
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| ||||||| ||||||||| |||| | |||||||||||| ||  |||||||||||||||    
T  28477862 tacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 28477764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 15337597 - 15337493
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||||||||||    
T  15337597 tacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattttgaaac 15337498  T
Q  114 ggatg 118  Q
     ||||    
T  15337497 agatg 15337493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 32671925 - 32671818
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||| | || |||| ||||||||||||||||   ||||||||||||||||    
T  32671925 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 32671826  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  32671825 ggagggag 32671818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 29693992 - 29693894
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||  |||| ||||||||| ||||||||||| ||| ||||||| ||||||||| |||| | |||||||||||| ||  |||||||||||||||    
T  29693992 tacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaaa 29693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 3989442 - 3989518
Alignment:
Q  40 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||| ||||||    
T  3989442 ttagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgtaacgga 3989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 17155258 - 17155158
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| |||||||||||||||||  ||||||  |||||||| ||||||| |||| || |||||  |||||  | ||||||||||||||||    
T  17155258 tacatgctaacatttgtatttatatgttagttatgaagtatgatcaaagtaggtcatgtgaatagtgaacattttaaaaaaacgacatgtattttgaaac 17155159  T
Q  114 g 114  Q
    |    
T  17155158 g 17155158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 10520561 - 10520470
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||  |||||||| | |||| ||||||||||||||  | |||||| ||||||||||||||  |||||||||||||||||||| ||||    
T  10520561 tatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgtattttgaaacggaaggag 10520470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 5495358 - 5495252
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| |||||||||||  ||  ||||| |||   ||||||||||||||||| | |||| ||| |||| |||||| ||||    
T  5495358 tacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataaactatgtaaataatgcacatcgtaaaattgcgacatatattttaaaac 5495259  T
Q  114 ggatgga 120  Q
    |||||||    
T  5495258 ggatgga 5495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 31869817 - 31869715
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| |||||||||||  || |||||||||| | |||  |||| || |||||| ||||  || ||||||||||||||||    
T  31869817 tacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtattttgaaac 31869718  T
Q  114 gga 116  Q
    |||    
T  31869717 gga 31869715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 2360099 - 2360027
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 86  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| | || |||||| | ||||||    
T  2360099 tacatgctaacatttttatttatatattagttaaaaattatagtcaaagtaaattatataaatagtacacatt 2360027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 1040933 - 1040854
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaa 93  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| |||||||||| ||| || |||| |||||||||||||||    
T  1040933 tacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaa 1040854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 14214066 - 14214166
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||||||||||||| || |||||||| ||  ||||||  |||||   | |||||||||||||  |||| ||| ||||||||||| ||||    
T  14214066 tacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacattataaaattgcgacatgtattttaaaac 14214165  T
Q  114 g 114  Q
    |    
T  14214166 g 14214166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 21540809 - 21540880
Alignment:
Q  41 tagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    ||||| |||||||| ||||||||||||||  | |||| ||||||||| ||||||  ||||||||||||||||    
T  21540809 tagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 3623863 - 3623963
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||   || | ||||||| | |||| |||| ||| |||| |||||| ||||    
T  3623863 tacatgctaacatttgtatttatatattagttaaaaa-tatggtcaaagtaaactatatgaataatgtatattgtaaaactgcgacatatattttaaaac 3623961  T
Q  114 gg 115  Q
    ||    
T  3623962 gg 3623963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 12226091 - 12226030
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtc 68  Q
    |||||| |||||||||| |||||||||||||  |||||||||||||||  ||||| ||||||    
T  12226091 aatatcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataagtc 12226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 20437177 - 20437274
Alignment:
Q  25 atttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||| ||||||||  |||||||||||  |||  ||||||||||||| || |||| ||||||||||||||||   ||||||||||  ||||||||||||    
T  20437177 atttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtatttgaaaacggatggag 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 10298726 - 10298798
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacatt 86  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||| |||||| ||||  |||| |||| ||||||||    
T  10298726 tacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 24955549 - 24955629
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 94  Q
    |||||||||| |||| |||||||   ||||||||||| |||  ||||| ||||||| || ||||||||||||| |||||||    
T  24955549 tacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaat 24955629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 19240738 - 19240823
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaa 92  Q
    |||||| ||| ||| || |||| ||||||||| ||||||||||| ||| |||||| ||||| |||| |||| |  |||||||||||    
T  19240738 aatatcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 23158062 - 23158115
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagt 67  Q
    |||||| |||||||| ||||||||| ||||||||||| | | ||||||||||||    
T  23158062 tacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 23158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 3321706 - 3321766
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataat 79  Q
    ||||||||||||||| ||| |||||||||||| ||| ||||| |||| |||||| ||||||    
T  3321706 ctaacatttatatttgtatattagttaaaaagatatggtcaatgtaaatcatgtgaataat 3321766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 26567297 - 26567333
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaa 50  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  26567297 tacatgctaccatttatatttatatattagttaaaaa 26567333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 616892 - 616785
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  616892 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 616793  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  616792 ggagggag 616785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 623285 - 623178
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  623285 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 623186  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  623185 ggagggag 623178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 2766201 - 2766303
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||   | ||||||||||||||    
T  2766201 tacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgtattttgaaac 2766300  T
Q  114 gga 116  Q
    |||    
T  2766301 gga 2766303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 18044534 - 18044427
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  18044534 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 18044435  T
Q  114 ggatggag 121  Q
    ||||||||    
T  18044434 ggatggag 18044427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 42587401 - 42587508
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  42587401 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 42587500  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  42587501 ggagggag 42587508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 3100648 - 3100750
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||   ||||||||||||||||    
T  3100648 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtattttgaaac 3100747  T
Q  114 gga 116  Q
    |||    
T  3100748 gga 3100750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 36642011 - 36642125
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagta-tagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||| |||| ||||||||| | |||||||||||| | |||||||||||||| || |||| ||||||||||||||||  ||||||||||||||||    
T  36642011 tacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttgaaa 36642110  T
Q  113 cggatggagcagctt 127  Q
    |||| |||| |||||    
T  36642111 cggagggagtagctt 36642125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 40494493 - 40494391
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||| ||||||||||||||| |||||||||||||| || |||| ||||||||| ||||||   ||||||||||||||||    
T  40494493 tacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttgaaac 40494394  T
Q  114 gga 116  Q
    |||    
T  40494393 gga 40494391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 13216876 - 13216972
Alignment:
Q  16 catgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||| |||||||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   |||||||||||||||    
T  13216876 catgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaa 13216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 24524198 - 24524102
Alignment:
Q  25 atttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||| ||||||| |||||||||||||| |  |||||||||||||||||||| ||||    
T  24524198 atttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaatttgaacatgtattttgaaacggaaggag 24524102  T

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Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 6414135 - 6414225
Alignment:
Q  31 atttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||||  |||| |||||| ||||||||||||    
T  6414135 atttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgtgacatttattttaaaacggatggag 6414225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 14237389 - 14237287
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  14237389 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 14237290  T
Q  114 gga 116  Q
    |||    
T  14237289 gga 14237287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 32998559 - 32998457
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||    
T  32998559 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaac 32998460  T
Q  114 gga 116  Q
    |||    
T  32998459 gga 32998457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 5878431 - 5878319
Alignment:
Q  8 atatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||| |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||||||||||||  ||||||||||    
T  5878431 atatcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaatg-gacatgtattt 5878333  T
Q  108 tgaaacggatggag 121  Q
     |||||||| ||||    
T  5878332 ggaaacggagggag 5878319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 38957279 - 38957175
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| |||||||| |||||||||||| ||| |||||||||| ||| || |||| ||||||||||||||||   |||| |||||||||||    
T  38957279 tacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatatattttgaaac 38957180  T
Q  114 ggatg 118  Q
    |||||    
T  38957179 ggatg 38957175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 22489433 - 22489533
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatgg 119  Q
    |||| |||| ||||||||  ||||||||||||||| |||||||||||||| || |||| ||||||||||||||||   ||||| ||||| ||||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgcattttaaaacggatgg 22489532  T
Q  120 a 120  Q
    |    
T  22489533 a 22489533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 35403609 - 35403521
Alignment:
Q  30 tatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatg 118  Q
    ||||||||  ||||||||||||||| ||||||||| |||| || |||| ||||||||||||||||   |||||||||||||||||||||    
T  35403609 tatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggatg 35403521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 36167182 - 36167078
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||| |||| ||||||||  ||||| |||||||||| ||||||||||||| || |||| | |||||||||||||||  ||||||||||| |||||||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacgga 36167083  T
Q  117 tggag 121  Q
     ||||    
T  36167082 gggag 36167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 41263919 - 41263821
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| ||||||||||||||||   | |||||||||||||    
T  41263919 tacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgtattttgaaa 41263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 3370402 - 3370503
Alignment:
Q  7 aatatcgtacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtatt 106  Q
    |||||| |||||  |||||||| ||||||||| ||| ||||||| ||| ||||||||||||||||| || | | ||||||||||||| |||| |||||||    
T  3370402 aatatcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaaaagcaaaatgtatt 3370501  T
Q  107 tt 108  Q
    ||    
T  3370502 tt 3370503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 18090434 - 18090338
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacg 114  Q
    |||||||||||||||||||||| ||||||||||| |||  ||||| |||||||| |||||| ||||||||| |||||| | ||||||| ||| |||||    
T  18090434 atgctaacatttatatttatatattagttaaaaaatatgatcaaa-taagtcatataaatagtgcacattgaaaaaattcgacatgtaatttaaaacg 18090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 132126 - 132019
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||| |||  ||||||||||||| || |||| ||||| |||||||||    ||||||||||||||||    
T  132126 tacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgtattttgaaac 132027  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  132026 ggagggag 132019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 4270245 - 4270347
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||| |||||||   ||||||||||| ||||    
T  4270245 tacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttaaaac 4270344  T
Q  114 gga 116  Q
    |||    
T  4270345 gga 4270347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 8394429 - 8394348
Alignment:
Q  40 ttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||||| | | |||||||||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  8394429 ttagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagggag 8394348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 33700232 - 33700334
Alignment:
Q  20 ctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaa-aatgcaacatgtattttgaaacggatg 118  Q
    ||||||||| ||||||||| ||||||||||| ||| |||||||||||  |||| |||| ||| ||||| |||   ||| ||||||||||||||||||| |    
T  33700232 ctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattgtaaattttgcgacatgtattttgaaacggagg 33700331  T
Q  119 gag 121  Q
    |||    
T  33700332 gag 33700334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 112
Target Start/End: Complemental strand, 18035209 - 18035111
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaa 112  Q
    |||||||||||||||  |||||||| ||||||||||| ||| ||||| ||| | | ||  ||||||| |||||| |||| ||| |||| ||||||||||    
T  18035209 tacatgctaacatttgcatttatatattagttaaaaattatggtcaatgtacgccgtgcgaataatgtacattgtaaaattgcgacatatattttgaaa 18035111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 5173360 - 5173259
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||| ||||||||| | |||  ||||||||| |||| | |||| | |||||||||||| |||||| | |||||| ||||    
T  5173360 tacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaattgcaacgtatattttaaaac 5173261  T
Q  114 gg 115  Q
    ||    
T  5173260 gg 5173259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 32780081 - 32780144
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaata 77  Q
    ||||| |||||||||||||||||||  |||||||||  |||||| || ||||||||||| ||||    
T  32780081 tacatactaacatttatatttatatactagttaaaatatatagttaaggtaagtcatgtgaata 32780144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 13217219 - 13217281
Alignment:
Q  59 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    ||||||||||| || |||| || |||||||||||||   ||||||||||||||||||| ||||    
T  13217219 aaagtaagtcaagtgaatagtgtacattgcaaaaattggacatgtattttgaaacggaaggag 13217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 11637891 - 11637811
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaat 94  Q
    |||||||||| | || ||||||||   |||||||||||||  |||||| ||||||| || |||| ||||||||| ||||||    
T  11637891 tacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaat 11637811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 38497147 - 38497083
Alignment:
Q  59 aaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggagca 123  Q
    ||||||||||| || |||| ||||||||| ||||||  ||||| |||||| ||||||| ||||||    
T  38497147 aaagtaagtcaagtgaatagtgcacattgtaaaaattgaacatatattttaaaacggagggagca 38497083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 13870 - 13977
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||||||||||||  ||||||||||||||| |||||||||||||| || |||| |||||||| |||| ||   ||||||||||| ||||    
T  13870 tacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgtattttaaaac 13969  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  13970 ggagggag 13977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 9433 - 9374
Alignment:
Q  62 gtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacggatggag 121  Q
    |||||||| || |||| ||||||||||||||||   ||||||||||||||||||| ||||    
T  9433 gtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagggag 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 100800 - 100907
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||| ||||| |||| ||||||||  ||||||||||| ||| |||||||||||||| || |||| |||||||||||||| |  |||||||||||||||||    
T  100800 tacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgtattttgaaac 100899  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  100900 ggagggag 100907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 161990 - 162097
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||||||| |||| ||||||||  ||||||||||||||| ||||| |||||||| || |||| |||||||| |||||||   ||||||||||||||||    
T  161990 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgtattttgaaac 162089  T
Q  114 ggatggag 121  Q
    ||| ||||    
T  162090 ggagggag 162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 8986 - 9090
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||| ||||||    
T  8986 tacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaac 9085  T
Q  114 ggatg 118  Q
    |||||    
T  9086 ggatg 9090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 138183 - 138287
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| ||||||||||| | | |||||||||||| |||| ||||||||| |||| |||| ||  | ||||||| |||||     
T  138183 tacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaag 138282  T
Q  114 ggatg 118  Q
    |||||    
T  138283 ggatg 138287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 67922 - 68022
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    |||||| ||| |||| ||||||||  ||||||||||||||| ||||||||||||||  | |||| |||||||| |||||||   ||||||||||||||||    
T  67922 tacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgtattttgaaac 68021  T
Q  114 g 114  Q
    |    
T  68022 g 68022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 22889 - 22785
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaac 113  Q
    ||||||||||||||| ||||||||| | ||||||||| | | |||||| ||||| |||| ||||||||| |||| |||| ||  | ||||||| ||||||    
T  22889 tacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaattgtgaaatgtattatgaaac 22790  T
Q  114 ggatg 118  Q
    |||||    
T  22789 ggatg 22785  T

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Target: scaffold0595 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 4057 - 3964
Alignment:
Q  14 tacatgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattt 107  Q
    ||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||  |||| |||| ||| ||| | |||| | |||| |||||||    
T  4057 tacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcatcgtaaaattacaacttgtattt 3964  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 71066 - 70963
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaagtatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgga 116  Q
    ||||||| |||| ||||||||  ||||||||||| ||| |||||| ||||||| || |||| |||| |||||||||||   ||||||||||||||| |||    
T  71066 atgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgtattttgaaatgga 70968  T
Q  117 tggag 121  Q
     ||||    
T  70967 gggag 70963  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 217031 - 217131
Alignment:
Q  17 atgctaacatttatatttatatgttagttaaaaag-tatagtcaaagtaagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttgaaacgg 115  Q
    |||||||||||| ||||||||| ||| |||||||  ||| |||||  ||||| |||  |||| ||||||||| |||| ||| || |||||||||||||||    
T  217031 atgctaacatttgtatttatatattacttaaaaaaatatggtcaacataagttatgagaatattgcacattgtaaaattgcgacttgtattttgaaacgg 217130  T
Q  116 a 116  Q
    |    
T  217131 a 217131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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