View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13836_high_4 (Length: 503)

Name: NF13836_high_4
Description: NF13836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13836_high_4
NF13836_high_4
[»] chr5 (34 HSPs)
chr5 (5-440)||(36006980-36007417)
chr5 (12-113)||(5072860-5072963)
chr5 (6-126)||(34534819-34534941)
chr5 (18-126)||(16926190-16926302)
chr5 (31-128)||(43525373-43525471)
chr5 (31-127)||(20364462-20364559)
chr5 (12-107)||(16954589-16954688)
chr5 (32-110)||(6735477-6735556)
chr5 (73-127)||(16926329-16926384)
chr5 (31-126)||(4044592-4044690)
chr5 (31-128)||(8369813-8369912)
chr5 (45-126)||(38978648-38978733)
chr5 (31-127)||(35334642-35334742)
chr5 (71-127)||(4475139-4475196)
chr5 (31-111)||(20369186-20369267)
chr5 (14-126)||(32659714-32659827)
chr5 (86-127)||(41183999-41184040)
chr5 (6-127)||(3725081-3725205)
chr5 (94-126)||(6610730-6610762)
chr5 (6-99)||(10044591-10044687)
chr5 (93-129)||(13716899-13716935)
chr5 (31-126)||(22982843-22982939)
chr5 (31-126)||(39008025-39008121)
chr5 (6-126)||(15898087-15898210)
chr5 (31-127)||(36446793-36446891)
chr5 (31-127)||(36469214-36469312)
chr5 (88-126)||(42575813-42575851)
chr5 (86-127)||(25814254-25814295)
chr5 (94-127)||(39060596-39060629)
chr5 (86-126)||(6629553-6629593)
chr5 (86-126)||(19817111-19817151)
chr5 (86-126)||(22583045-22583085)
chr5 (78-126)||(31090200-31090248)
chr5 (87-123)||(41686665-41686701)
[»] chr6 (14 HSPs)
chr6 (12-126)||(3166202-3166319)
chr6 (12-128)||(15371957-15372077)
chr6 (12-126)||(34441788-34441904)
chr6 (12-126)||(33921563-33921681)
chr6 (45-126)||(34803836-34803919)
chr6 (86-126)||(34915983-34916023)
chr6 (12-91)||(8232404-8232486)
chr6 (48-128)||(15351515-15351597)
chr6 (86-121)||(9755312-9755347)
chr6 (12-130)||(15081314-15081436)
chr6 (6-113)||(2657808-2657920)
chr6 (46-127)||(16125966-16126047)
chr6 (6-127)||(30064037-30064161)
chr6 (86-126)||(33109268-33109308)
[»] chr8 (30 HSPs)
chr8 (12-126)||(10729016-10729132)
chr8 (12-127)||(14689854-14689973)
chr8 (12-126)||(2195363-2195481)
chr8 (12-126)||(38908721-38908841)
chr8 (6-128)||(2796932-2797059)
chr8 (12-121)||(13085045-13085157)
chr8 (31-126)||(29451243-29451340)
chr8 (6-127)||(29638195-29638320)
chr8 (12-127)||(44790516-44790635)
chr8 (86-126)||(38252610-38252650)
chr8 (34-127)||(2119610-2119705)
chr8 (31-122)||(8566521-8566615)
chr8 (12-127)||(8618023-8618141)
chr8 (12-128)||(28791200-28791321)
chr8 (12-118)||(12958276-12958385)
chr8 (12-126)||(14748800-14748919)
chr8 (86-127)||(32967449-32967490)
chr8 (12-127)||(32231814-32231932)
chr8 (12-107)||(32678949-32679048)
chr8 (12-111)||(36012066-36012169)
chr8 (45-126)||(15020568-15020650)
chr8 (48-127)||(20244682-20244761)
chr8 (48-127)||(20248400-20248479)
chr8 (31-127)||(138928-139025)
chr8 (93-126)||(12653580-12653613)
chr8 (86-127)||(29615689-29615730)
chr8 (80-127)||(5878651-5878699)
chr8 (94-126)||(8394698-8394730)
chr8 (36-91)||(11637070-11637126)
chr8 (45-127)||(34403108-34403192)
[»] chr1 (47 HSPs)
chr1 (12-127)||(2886065-2886184)
chr1 (12-128)||(26924364-26924483)
chr1 (12-126)||(36232884-36233002)
chr1 (18-126)||(29225508-29225620)
chr1 (12-120)||(29225654-29225766)
chr1 (12-129)||(47293693-47293813)
chr1 (7-128)||(26760051-26760175)
chr1 (12-119)||(27210062-27210173)
chr1 (12-126)||(50333830-50333948)
chr1 (31-126)||(14090538-14090634)
chr1 (12-127)||(24131495-24131613)
chr1 (12-123)||(26583626-26583741)
chr1 (36-117)||(37541238-37541321)
chr1 (48-129)||(46363544-46363627)
chr1 (12-121)||(3555650-3555762)
chr1 (93-130)||(7787564-7787601)
chr1 (31-118)||(15290393-15290482)
chr1 (45-127)||(25983758-25983841)
chr1 (12-126)||(29756237-29756358)
chr1 (6-127)||(5115914-5116039)
chr1 (45-119)||(5503319-5503395)
chr1 (6-127)||(31798311-31798437)
chr1 (12-127)||(16956278-16956396)
chr1 (94-129)||(36057796-36057831)
chr1 (12-126)||(36326284-36326401)
chr1 (12-126)||(16451524-16451644)
chr1 (12-126)||(16460677-16460797)
chr1 (5-126)||(30903315-30903440)
chr1 (12-119)||(37281355-37281465)
chr1 (31-118)||(8773141-8773230)
chr1 (13-112)||(12691816-12691917)
chr1 (34-91)||(27932958-27933015)
chr1 (12-126)||(2219543-2219659)
chr1 (73-123)||(7310701-7310752)
chr1 (45-119)||(21304225-21304299)
chr1 (12-126)||(32347839-32347957)
chr1 (94-129)||(36058924-36058959)
chr1 (86-116)||(37495730-37495760)
chr1 (31-129)||(45048923-45049024)
chr1 (6-91)||(705438-705526)
chr1 (5-63)||(20988570-20988630)
chr1 (12-91)||(26040571-26040654)
chr1 (86-127)||(52147233-52147274)
chr1 (12-98)||(7075498-7075586)
chr1 (86-126)||(10587755-10587795)
chr1 (94-126)||(45889432-45889464)
chr1 (6-121)||(52382475-52382596)
[»] chr7 (32 HSPs)
chr7 (12-128)||(37496491-37496611)
chr7 (12-126)||(18731337-18731455)
chr7 (6-127)||(3667965-3668090)
chr7 (6-127)||(5068386-5068511)
chr7 (12-112)||(30659574-30659678)
chr7 (12-111)||(39343765-39343867)
chr7 (15-127)||(32775876-32775993)
chr7 (12-128)||(30462553-30462673)
chr7 (6-127)||(28333064-28333190)
chr7 (6-77)||(8149905-8149978)
chr7 (73-126)||(32346408-32346462)
chr7 (12-126)||(47238113-47238230)
chr7 (6-127)||(12308274-12308397)
chr7 (6-126)||(27337961-27338084)
chr7 (46-128)||(9658731-9658815)
chr7 (45-126)||(25778631-25778715)
chr7 (6-126)||(29257442-29257566)
chr7 (78-126)||(34064110-34064159)
chr7 (86-127)||(34963987-34964028)
chr7 (6-126)||(39498569-39498693)
chr7 (94-126)||(2846856-2846888)
chr7 (31-126)||(7425994-7426089)
chr7 (86-126)||(30462911-30462951)
chr7 (86-126)||(31581621-31581661)
chr7 (12-124)||(46288525-46288640)
chr7 (94-129)||(5724889-5724924)
chr7 (88-126)||(2842220-2842258)
chr7 (94-128)||(33584455-33584489)
chr7 (48-127)||(44341007-44341086)
chr7 (86-127)||(11616449-11616490)
chr7 (86-126)||(21387776-21387816)
chr7 (86-130)||(46095618-46095662)
[»] chr4 (38 HSPs)
chr4 (31-130)||(20964409-20964510)
chr4 (12-126)||(4360502-4360619)
chr4 (31-111)||(5291601-5291681)
chr4 (31-126)||(53848228-53848324)
chr4 (45-113)||(3505630-3505698)
chr4 (12-131)||(37316016-37316139)
chr4 (12-127)||(41436375-41436494)
chr4 (12-129)||(44633048-44633170)
chr4 (86-129)||(9093905-9093948)
chr4 (31-116)||(8974594-8974680)
chr4 (46-127)||(21954833-21954917)
chr4 (86-126)||(39258448-39258488)
chr4 (93-128)||(25390609-25390644)
chr4 (41-126)||(47386611-47386698)
chr4 (31-127)||(51572342-51572440)
chr4 (46-128)||(13529755-13529839)
chr4 (31-126)||(28330687-28330784)
chr4 (31-120)||(36047216-36047308)
chr4 (6-126)||(41710232-41710356)
chr4 (6-126)||(42132708-42132832)
chr4 (86-130)||(41594876-41594920)
chr4 (86-126)||(42051830-42051870)
chr4 (86-126)||(48740416-48740456)
chr4 (12-91)||(29550821-29550903)
chr4 (94-129)||(35998298-35998333)
chr4 (94-125)||(42024381-42024412)
chr4 (48-112)||(13719749-13719817)
chr4 (12-127)||(46958615-46958735)
chr4 (6-123)||(18849847-18849967)
chr4 (76-109)||(32950012-32950045)
chr4 (94-127)||(39053082-39053115)
chr4 (31-126)||(39976506-39976603)
chr4 (86-127)||(42670553-42670594)
chr4 (36-96)||(44022001-44022062)
chr4 (76-128)||(49218938-49218991)
chr4 (71-111)||(29644266-29644306)
chr4 (31-126)||(49812125-49812221)
chr4 (86-126)||(53815939-53815979)
[»] chr3 (30 HSPs)
chr3 (45-121)||(41286947-41287023)
chr3 (12-123)||(48409482-48409597)
chr3 (45-126)||(37042005-37042087)
chr3 (12-127)||(30261596-30261715)
chr3 (12-126)||(39329844-39329962)
chr3 (31-128)||(53754180-53754279)
chr3 (86-131)||(1334947-1334992)
chr3 (12-126)||(46194300-46194418)
chr3 (12-127)||(38600900-38601018)
chr3 (6-126)||(24619000-24619126)
chr3 (48-126)||(1922990-1923070)
chr3 (76-127)||(9218039-9218091)
chr3 (78-126)||(47496072-47496121)
chr3 (32-127)||(42547222-42547320)
chr3 (34-126)||(12744708-12744802)
chr3 (31-127)||(39365132-39365230)
chr3 (45-125)||(45746261-45746343)
chr3 (31-91)||(2868505-2868566)
chr3 (86-127)||(26480290-26480331)
chr3 (94-127)||(26832001-26832034)
chr3 (86-127)||(32023272-32023313)
chr3 (31-79)||(8498199-8498247)
chr3 (31-119)||(10854697-10854788)
chr3 (31-126)||(33994553-33994649)
chr3 (32-126)||(36097772-36097868)
chr3 (86-126)||(43640743-43640783)
chr3 (12-119)||(50736003-50736114)
chr3 (12-119)||(50776741-50776852)
chr3 (86-126)||(51164844-51164884)
chr3 (12-107)||(53050940-53051039)
[»] scaffold0155 (1 HSPs)
scaffold0155 (45-126)||(8083-8165)
[»] chr2 (34 HSPs)
chr2 (31-127)||(314329-314427)
chr2 (12-129)||(31348403-31348524)
chr2 (6-116)||(37529159-37529271)
chr2 (31-125)||(13221965-13222060)
chr2 (12-123)||(43182172-43182287)
chr2 (12-126)||(6075391-6075511)
chr2 (31-126)||(18181329-18181426)
chr2 (31-126)||(28843952-28844049)
chr2 (41-126)||(9472317-9472404)
chr2 (6-116)||(18460393-18460507)
chr2 (86-129)||(20696953-20696996)
chr2 (12-126)||(24356006-24356124)
chr2 (5-113)||(31592459-31592570)
chr2 (31-126)||(6972659-6972756)
chr2 (1-127)||(25604247-25604385)
chr2 (5-126)||(1908581-1908706)
chr2 (84-126)||(7213370-7213412)
chr2 (6-127)||(40964947-40965071)
chr2 (43-119)||(44260476-44260554)
chr2 (86-127)||(3123538-3123579)
chr2 (86-127)||(7649026-7649067)
chr2 (15-127)||(38873017-38873133)
chr2 (86-126)||(28108554-28108594)
chr2 (31-121)||(38282540-38282632)
chr2 (73-119)||(2427259-2427306)
chr2 (94-129)||(10394425-10394460)
chr2 (45-118)||(29938063-29938138)
chr2 (72-126)||(30757724-30757779)
chr2 (86-128)||(3100292-3100334)
chr2 (45-126)||(4283150-4283232)
chr2 (78-126)||(5425752-5425801)
chr2 (78-126)||(6685832-6685881)
chr2 (93-126)||(40710468-40710501)
chr2 (93-129)||(28572103-28572139)
[»] scaffold0007 (2 HSPs)
scaffold0007 (6-126)||(157922-158046)
scaffold0007 (88-126)||(230151-230189)
[»] scaffold0003 (1 HSPs)
scaffold0003 (79-126)||(353785-353832)
[»] scaffold0058 (2 HSPs)
scaffold0058 (45-129)||(3201-3285)
scaffold0058 (45-129)||(4373-4457)
[»] scaffold0001 (1 HSPs)
scaffold0001 (94-126)||(394672-394704)
[»] scaffold0034 (1 HSPs)
scaffold0034 (84-118)||(97962-97996)
[»] scaffold0685 (1 HSPs)
scaffold0685 (6-121)||(6488-6609)


Alignment Details
Target: chr5 (Bit Score: 386; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 5 - 440
Target Start/End: Original strand, 36006980 - 36007417
Alignment:
Q  5 ataatactaattagagttatgattggaaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttttt-acaaatgactca 103  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  36006980 ataatattaattagagttataattggaaaaataataaatgttgtattgaaaagtgaaatagatcaatatttttggacaatatttttttacaaatgactca 36007079  T
Q  104 gttattatgggacggagggagtatatacgcagtgttttattctacgtatcaaatggtgagatgagaatgagaccggattatataaagttcattaattttt 203  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36007080 gttattatgagacggagggagtatatacgcaatgttttattctacatatcaaatggtgagatgagaatgagaccggattatataaagttcattaattttt 36007179  T
Q  204 taacatttgaactaaaaacacaacttaatttttagaggta-gcaaagataaatatgagaaaagatcgaaacgatttatatttttatttgttaattcaaag 302  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  36007180 taacatttgaactaaaaacacaacttaaattttagaggtaagcaaagataaatatgagaaaagatcgaaaccatttatatttttatttgttaattcaaat 36007279  T
Q  303 tcatgacatgaattttaaaaattctgtttttctttgtgatggatgatgcaggggaatattgttgcttgaaggttgtgattttgaagccttatgtgagtta 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36007280 tcatgacatgaattttaaaaattctgtttttctttgtgatggatgatgcaggggaatattgttgcttgaaggttgtgattttgaagccttatgtgagtta 36007379  T
Q  403 gttaaattaatatatagctcttcatcattattaaataa 440  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36007380 gttaaattaatatatagctcttcatcattattaaataa 36007417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 5072963 - 5072860
Alignment:
Q  12 taattagagttatgattggaaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttatt 109  Q
    ||||||||||||| |||| ||||||||| | |||||||||||||| |||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  5072963 taattagagttataattgaaaaaataattattgttgtattgaaaagtgaaatggatcaatttttttggaacaatattttttagcaaatgactcagttatt 5072864  T
Q  110 atgg 113  Q
    ||||    
T  5072863 atgg 5072860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 34534941 - 34534819
Alignment:
Q  6 taatactaattagagttatgattggaaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactca 103  Q
    ||||| ||||||||||||| |||| ||||||||| ||| |||||||||||| |||| |  |||||| ||||| |||||||| ||||||  ||||| ||||    
T  34534941 taatattaattagagttataattgaaaaaataattaatattgtattgaaaagtgaactgaatcaatttttttgggacaatatttttttgtaaatggctca 34534842  T
Q  104 gttattatgggacggagggagta 126  Q
     ||||||||||| ||||||||||    
T  34534841 cttattatgggatggagggagta 34534819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 16926190 - 16926302
Alignment:
Q  18 gagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttt-ttacaaatgactcagttattatgg 113  Q
    ||||||| ||||||||||  |||| ||| |||||||| |||||||||| | ||||| ||||| |||||||||||| |||||||||  |||||||||||||    
T  16926190 gagttataattggaaaaaagtaattaatattgtattggaaaatgaaatgggtcaatttttttaggacaatatttttttacaaatggatcagttattatgg 16926289  T
Q  114 gacggagggagta 126  Q
    ||||||| |||||    
T  16926290 gacggagagagta 16926302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 43525471 - 43525373
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatattttttacaaatgactcagttattatgggacggagggagtata 128  Q
    ||||| ||| |||||||||||||||| ||||||   |||| |||| |||| |||||||||| | |||||  ||||||||||||||||||||||||||||    
T  43525471 aaaaaaaattaatgttgtattgaaaactgaaatgtgtcaagatttctggaacaatatttttcataaatggatcagttattatgggacggagggagtata 43525373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 20364559 - 20364462
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||| |||| ||| |||||||||||  |||||| ||||||| ||||| |||||||||||||| ||||||||||| ||||||| ||| ||||| |||||    
T  20364559 aaaagtaattaatattgtattgaaaggtgaaattgatcaatttttttaggacaatattttttgcaaatgactcacttattataggatggaggaagtat 20364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 16954688 - 16954589
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata-ttttttacaaatgactcagtta 107  Q
    ||||||||||||| |||| |||||  |||| |||||||||||| |||||||||| |||||| ||| || |||||||| |||||||||||||| |||||||    
T  16954688 taattagagttataattgaaaaaaagtaattaatgttgtattgtaaaatgaaatggatcaagattcttaggacaatatttttttacaaatgagtcagtta 16954589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 6735477 - 6735556
Alignment:
Q  32 aaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatattttttacaaatgactcagttatta 110  Q
    |||| ||| |||||| |||| |||| |||||||||||||  |||||||| ||||||||||||||||||||||| ||||||    
T  6735477 aaaaaaatcaatgttatattaaaaagtgaaatagatcaaattttttggaacaatattttttacaaatgactcacttatta 6735556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 16926384 - 16926329
Alignment:
Q  73 tttttggacaatatttttt-acaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||    
T  16926384 tttttggacaatatttttttacaaatgactcagttattatgggatggaaggagtat 16926329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 4044592 - 4044690
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaatatt--ttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| |||||||||||| ||||||   |||| |||||| ||||| | ||  |||| ||||||||||||||||||||||||||||||||||    
T  4044592 aaaagtaattaatattgtattgaaaagtgaaatgattcaattattttgggacattttttattttgcaaatgactcagttattatgggacggagggagta 4044690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 8369813 - 8369912
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatattt-tttacaaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||| ||| ||||||||||||||||||| | |||  |||||| ||||| | ||| ||| |||||| ||||| |||| ||||||||||||||||||    
T  8369813 aaaaataattaatattgtattgaaaaatgaaatggctcagttattttgggacactttttatttgcaaatggctcagctattgtgggacggagggagtata 8369912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 38978733 - 38978648
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttt---acaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| |||||| ||||||| ||||| ||||||||||||||   | || || ||||||||||| |||||||||||||||    
T  38978733 ttgtattgaaaagtgaaatggatcaattattttgggacaatatttttttttaaaattggctcagttattacgggacggagggagta 38978648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 35334642 - 35334742
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttac---aaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| |||| ||||||||||| |||||| | ||| | ||||| ||||| | |||||||    ||||||||||||||||||||||||||| |||||    
T  35334642 aaaaataattaatgatgtattgaaaagtgaaatggctcacttattttgggacacttttttttattgaaaatgactcagttattatgggacggagagagta 35334741  T
Q  127 t 127  Q
    |    
T  35334742 t 35334742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 4475196 - 4475139
Alignment:
Q  71 tatttttggacaatatttttta-caaatgactcagttattatgggacggagggagtat 127  Q
    |||||| |||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  4475196 tattttgggacaatattttatagcaaatgactcagttattttgggacggaggtagtat 4475139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 20369267 - 20369186
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactcagttattat 111  Q
    |||| |||| ||| |||||||||||| ||||||   ||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  20369267 aaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttttgggacactattttttacaaatgactcacttattat 20369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 32659827 - 32659714
Alignment:
Q  14 attagagttatgattggaaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatg 112  Q
    ||||||||||| || | ||||||||| ||| |||||||||||| | |||||  || || ||||  ||||||| ||||||||||| |||||| ||||||||    
T  32659827 attagagttataatcgaaaaaataattaatattgtattgaaaagtaaaataagtcgatcatttcaggacaattttttttacaaaagactcacttattatg 32659728  T
Q  113 ggacggagggagta 126  Q
    | ||| | ||||||    
T  32659727 gaacgaatggagta 32659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 41184040 - 41183999
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  41184040 tttttttcaaatgactcagttattatgggagggagggagtat 41183999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 3725205 - 3725081
Alignment:
Q  6 taatactaattagagttatgattggaaaaataa-taaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgactc 102  Q
    ||||| ||||||||||||| |  ||||||| || | ||| |||||||||||| ||||||   ||| | ||||| ||||| | |||| || ||||||| ||    
T  3725205 taatattaattagagttataaagggaaaaaaaaattaatattgtattgaaaagtgaaatgactcagttattttaggacacttttttattgcaaatgattc 3725106  T
Q  103 agttattatgggacggagggagtat 127  Q
    |||||||||||||||||||||||||    
T  3725105 agttattatgggacggagggagtat 3725081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 6610762 - 6610730
Alignment:
Q  94 aaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||||||||||||    
T  6610762 aaatgactcagttattatgggacggagggagta 6610730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 10044687 - 10044591
Alignment:
Q  6 taatactaattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata-ttttttacaaatga 99  Q
    ||||| ||||||||||||| |||  ||||| |||| |||||||||||||||| |||||| |||||| ||| || | |||||| ||||||||||||||    
T  10044687 taatattaattagagttataattaaaaaaagtaattaatgttgtattgaaaagtgaaattgatcaaaattattagaacaatatttttttacaaatga 10044591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 13716935 - 13716899
Alignment:
Q  93 caaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||| ||||||||||||||||||||||||||    
T  13716935 caaatgactccgttattatgggacggagggagtatat 13716899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 22982939 - 22982843
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| | | |||||||||||| | |||   ||||||  ||||| ||||||| ||||||||||||||||| |||||||| |||||| ||||||    
T  22982939 aaaaataattattattgtattgaaaagttaaacgaatcaattcttttgagacaataatttttacaaatgactcacttattatgagacggacggagta 22982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 39008121 - 39008025
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| ||| |||||||||||| ||||||   | | | ||||| ||||| | |||||| ||||| ||||||||||| ||||||||||||||||    
T  39008121 aaaaataattaatattgtattgaaaagtgaaatgacttagttattttaggacatttttttttgcaaataactcagttattgtgggacggagggagta 39008025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 15898210 - 15898087
Alignment:
Q  6 taatactaattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttta-caaatgactc 102  Q
    ||||| ||||||| ||||| |||| ||||| |||| ||| |||||||||||| |||||||  ||||| ||| || | |||||||||||  |||||  |||    
T  15898210 taatattaattagtgttataattgaaaaaagtaattaatattgtattgaaaagtgaaataagtcaatttttctgaaacaatatttttttgcaaatagctc 15898111  T
Q  103 agttattatgggacggagggagta 126  Q
    ||||||||||||| | ||||||||    
T  15898110 agttattatgggatgaagggagta 15898087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 36446793 - 36446891
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaata-ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| ||| |||||||||||||||||||  ||||| ||||||  ||||||| |||||||||||    ||||| |||||| |||||||| |||||    
T  36446793 aaaaataattaatattgtattgaaaaatgaaatgaatcaattattttaagacaatatttttttacaaaaagttcagtcattatgagacggaggaagtat 36446891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 36469214 - 36469312
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaata-ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| ||| |||||||||||||||||||  ||||| ||||||  ||||||| |||||||||||    ||||| |||||| |||||||| |||||    
T  36469214 aaaaataattaatattgtattgaaaaatgaaatgaatcaattattttaagacaatatttttttacaaaaagttcagtcattatgagacggaggaagtat 36469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 42575813 - 42575851
Alignment:
Q  88 ttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  42575813 ttttacaaatggctcagttattgtgggacggagggagta 42575851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 25814295 - 25814254
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| |||||| |||||||||||||||||||| |||||||    
T  25814295 ttttttgcaaatgtctcagttattatgggacggatggagtat 25814254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 39060596 - 39060629
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||| |||||||||||||||||||||||    
T  39060596 aaatgactcaattattatgggacggagggagtat 39060629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 6629553 - 6629593
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||| ||||||||||||| |||||||||||||    
T  6629553 ttttttgcaaatggctcagttattatgagacggagggagta 6629593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 19817151 - 19817111
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||| |||||||||| |||||||| |||||||    
T  19817151 ttttttacaaatggctcagttattttgggacggtgggagta 19817111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 22583045 - 22583085
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| ||||||||| ||||||| ||||||||||||||||    
T  22583045 ttttttgcaaatgacttagttattgtgggacggagggagta 22583085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 31090248 - 31090200
Alignment:
Q  78 ggacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||| |||||| | ||||||||| |||||||||||| |||||||||    
T  31090248 ggacaattttttttgcgaatgactcaattattatgggacagagggagta 31090200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 41686665 - 41686701
Alignment:
Q  87 tttttacaaatgactcagttattatgggacggaggga 123  Q
    |||||||||||| |||||||||||||||| |||||||    
T  41686665 tttttacaaatggctcagttattatgggatggaggga 41686701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 3166202 - 3166319
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactcagttat 108  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||| |||||| |||||| ||| |||| |||||||||||||||||||  ||||||||    
T  3166202 taattagagttataattggaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagattcttgggacaatattttttacaaatggttcagttat 3166301  T
Q  109 tatgggacggagggagta 126  Q
    || || ||||||||||||    
T  3166302 tacggaacggagggagta 3166319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 15371957 - 15372077
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttt-ttacaaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||||||| |  ||||||||| |||||||| ||||||||| | || ||||||||| ||||||||| ||||||||    
T  15371957 taattagtgttataattggaaaaaagtaataaatataatattgaaaagtgaaataggtcaatatttctagaacaatatttttttacaaatggctcagtta 15372056  T
Q  108 ttatgggacggagggagtata 128  Q
    ||||||||| |||||||||||    
T  15372057 ttatgggacagagggagtata 15372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 34441904 - 34441788
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatattttttacaaatgactcagttatt 109  Q
    |||||| |||||| |||| ||||| |||| |||||||||||||||| |||||| ||  | |||| || ||||||||||||||||||||| ||||||||||    
T  34441904 taattaaagttataattgaaaaaagtaattaatgttgtattgaaaagtgaaatggacgactattcttaggacaatattttttacaaatggctcagttatt 34441805  T
Q  110 atgggacggagggagta 126  Q
    |||||||| | ||||||    
T  34441804 atgggacgaatggagta 34441788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 33921563 - 33921681
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt-acaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| ||| |||| ||| ||| |||||| | ||||| ||| ||| |||||||||||| | ||||| ||||||||    
T  33921563 taattagagttataattggaaaaaagtaattaatattgttttggaaagtgaaatgggtcaatttttctgggacaatatttttttaaaaatggctcagtta 33921662  T
Q  108 ttatgggacggagggagta 126  Q
    ||| |||||||||||||||    
T  33921663 ttacgggacggagggagta 33921681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 34803836 - 34803919
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttt-acaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| |||||| | ||||| |||||||| ||||||||||| |||| || ||||||||||||||||| |||||||||    
T  34803836 ttgtattgaaaagtgaaattggtcaatttttttggaacaatatttttttacaattggctcagttattatgggaccgagggagta 34803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 34915983 - 34916023
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  34915983 ttttttgcaaatgactcagttattatgggacggagggagta 34916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 8232404 - 8232486
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttt 91  Q
    |||||||| |||| ||||||||||  |||| |||||||||||||||| |||||| |||||| ||| ||| |||||||||||||    
T  8232404 taattagaattataattggaaaaaagtaattaatgttgtattgaaaagtgaaatggatcaagattcttgagacaatatttttt 8232486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 15351515 - 15351597
Alignment:
Q  48 tattgaaaaatgaaatagatcaatatttttgga-caatatttttta-caaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||| |||||| ||||||||||| | || |||||||||||  | ||||||||||||||||| |||| |||||||||||    
T  15351515 tattgaaaagtgaaattgatcaatatttctagaacaatatttttttgccaatgactcagttattataggactgagggagtata 15351597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 9755312 - 9755347
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagg 121  Q
    |||||| |||||||||||||||||||||||||||||    
T  9755312 ttttttgcaaatgactcagttattatgggacggagg 9755347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 15081436 - 15081314
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttta-caaatgactcagtta 107  Q
    ||||||||||||| |  |||||||  |||| ||| |||||||||||| |||||| | ||| | ||||| ||||| | ||||||  || ||||||||||||    
T  15081436 taattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaattgttcagttattttgggacacttttttttcgcagatgactcagtta 15081337  T
Q  108 ttatgggacggagggagtatata 130  Q
    ||||||||||||| || ||||||    
T  15081336 ttatgggacggagagaatatata 15081314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 2657920 - 2657808
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaataga-tcaatattttt-ggacaatatttttt-acaaatgac 100  Q
    ||||| |||||||| ||||  |||||||||  |||| ||| |||||||||||| | |||| |  ||||| ||||| |||||||||||||| |||||| ||    
T  2657920 taatattaattagaattatatttggaaaaaagtaattaattttgtattgaaaagtaaaattgggtcaatttttttaggacaatatttttttacaaataac 2657821  T
Q  101 tcagttattatgg 113  Q
    |||||||||||||    
T  2657820 tcagttattatgg 2657808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 16126047 - 16125966
Alignment:
Q  46 tgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||| || ||||| ||| | |||| |||||||||||| ||||||| | |  |||||||||  |||||||||||||    
T  16126047 tgtattgaaaagtgtaataggtcatttttttaggacaatattttctacaaataatttcgttattatgaaacggagggagtat 16125966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 30064037 - 30064161
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactc 102  Q
    ||||| ||||||||||||| |  |||||||  |||| ||| |||||||| ||| ||||||   ||| | ||||| ||||| | |||||| ||| ||||||    
T  30064037 taatattaattagagttataaagggaaaaaagtaattaatattgtattggaaagtgaaatgactcagttattttaggacatttttttttgcaattgactc 30064136  T
Q  103 agttattatgggacggagggagtat 127  Q
    | ||||||||||||||| |||||||    
T  30064137 aattattatgggacggaaggagtat 30064161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 33109308 - 33109268
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  33109308 ttttttgcaaatagctcagttattatgggacggagggagta 33109268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 10729016 - 10729132
Alignment:
Q  12 taattagagttatgattggaaaaat--aataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactcagttatt 109  Q
    ||||||||||||  |||||||||||  ||| | ||||  |||||||| |||||| | ||||| |||| |||||||||||||| |||||||||||||||||    
T  10729016 taattagagttacaattggaaaaatgtaattattgtttaattgaaaagtgaaatgggtcaattttttgggacaatattttttgcaaatgactcagttatt 10729115  T
Q  110 atgggacggagggagta 126  Q
    |||||||||||||||||    
T  10729116 atgggacggagggagta 10729132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 14689973 - 14689854
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| |||||||||||| |||||| | ||||| ||| ||| ||||||||||||  |||||||||||||||    
T  14689973 taattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttctgggacaatatttttttgcaaatgactcagtta 14689874  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||||||||||||||    
T  14689873 ttatgggacggagggagtat 14689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 2195481 - 2195363
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| | |||||||||||||| |||||| | ||||| ||||||| |||| |||||||  |||||||||||||||    
T  2195481 taattagagttataattggaaaaaagtaattattgttgtattgaaaagtgaaatgggtcaatttttttgggacaacatttttttgcaaatgactcagtta 2195382  T
Q  108 ttatgggacggagggagta 126  Q
    ||||||||||||| |||||    
T  2195381 ttatgggacggagagagta 2195363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 38908841 - 38908721
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatg---ttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatga-ctcagt 105  Q
    ||||||||||||| |||| ||||| |||||| ||   |||||||||||| |||||||||||||| |||||| |||||||||||||  |||| | ||||||    
T  38908841 taattagagttataattgaaaaaaataataattgatattgtattgaaaagtgaaatagatcaatttttttgagacaatatttttttaaaattagctcagt 38908742  T
Q  106 tattatgggacggagggagta 126  Q
    |||||||||| ||||||||||    
T  38908741 tattatgggatggagggagta 38908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 2797059 - 2796932
Alignment:
Q  6 taatactaattagagttatgattgg---aaaaataataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaatatttttta-caaatgac 100  Q
    ||||| ||||||||||||| |||||   ||||||||| ||| |||||||||||| ||||||   |||| | |||||| ||||||||||||  |||||| |    
T  2797059 taatattaattagagttataattggtaaaaaaataattaatattgtattgaaaagtgaaatgagtcaagtttttttgaacaatatttttttgcaaatggc 2796960  T
Q  101 tcagttattatgggacggagggagtata 128  Q
    ||| ||||||||||||||||||||||||    
T  2796959 tcacttattatgggacggagggagtata 2796932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 13085045 - 13085157
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactcagttat 108  Q
    |||||||||||||  |||||||||  |||| ||| |||||||||||| ||||||  |||||| ||||||| |||||||||||||||||||| ||  ||||    
T  13085045 taattagagttatatttggaaaaaggtaattaatattgtattgaaaagtgaaatgaatcaatttttttgggacaatattttttacaaatgaatcgcttat 13085144  T
Q  109 tatgggacggagg 121  Q
    ||||  |||||||    
T  13085145 tatgaaacggagg 13085157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 29451340 - 29451243
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| | ||||||||||||||||||||| | ||||| |||||  | |||||||||||  ||||||| ||||||||||||||||||| ||||||    
T  29451340 aaaaataattattgttgtattgaaaaatgaaatgggtcaatttttttaaaacaatatttttttgcaaatgattcagttattatgggacggatggagta 29451243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 29638320 - 29638195
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttt-acaaatgact 101  Q
    ||||| ||||||||||||| ||||  ||||  |||| |||||||||||||||| |||||| | |||| ||| |||  |||||||||||| ||||||||||    
T  29638320 taatattaattagagttataattgagaaaaggtaattaatgttgtattgaaaagtgaaatgggtcaagattcttgaaacaatattttttcacaaatgact 29638221  T
Q  102 cagttattatgggacggagggagtat 127  Q
     |||||||||  ||||||| ||||||    
T  29638220 tagttattatatgacggagtgagtat 29638195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 44790516 - 44790635
Alignment:
Q  12 taattagagttatgattggaaaaataataa---atgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagtta 107  Q
    ||||||||||||| |  ||||||||| |||   ||| ||||||||||| |||||| | | ||| ||||| ||||| | |||||| |||||  ||||||||    
T  44790516 taattagagttataaagggaaaaatagtaattaatgatgtattgaaaagtgaaatggcttaattattttgggacacttttttttgcaaatagctcagtta 44790615  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||||||||||||||    
T  44790616 ttatgggacggagggagtat 44790635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 38252610 - 38252650
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  38252610 ttttttgcaaatgactcagttattatgggacggagggagta 38252650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 2119705 - 2119610
Alignment:
Q  34 aataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||| |||||||||||  |||||||| ||| | ||||| ||||| | |||  |||||||||||||||||||||||| |||||||||||||    
T  2119705 aataattaatattgtattgaaatgtgaaatagctcagttattttgggacactttttaattacaaatgactcagttattatggaacggagggagtat 2119610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 8566521 - 8566615
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta--caaatgactcagttattatgggacggaggg 122  Q
    ||||||||| ||| |||||||||||| |||||| | ||||| ||| | ||||||||||||||   ||||||||| ||||||||||| ||||||||    
T  8566521 aaaaataattaatattgtattgaaaagtgaaatgggtcaatttttctaggacaatattttttttgcaaatgactaagttattatggtacggaggg 8566615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8618141 - 8618023
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttttt-acaaatgactcagttat 108  Q
    |||||| |||||| |||||| |||  |||| ||| | |||||| ||| |||||| | ||||| |||| |||||||||||||| |||||| ||||||||||    
T  8618141 taattaaagttataattggataaaagtaattaatatagtattggaaagtgaaattggtcaattttttgggacaatatttttttacaaataactcagttat 8618042  T
Q  109 tatgggacggagggagtat 127  Q
    ||| ||| ||||| |||||    
T  8618041 tataggatggaggaagtat 8618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 28791321 - 28791200
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg--acaatatttttt-acaaatgactcagtt 106  Q
    ||||||||||||| |||||| |||  |||| ||||||| |||||||| |||||| | |||| ||| ||||  |||||||||||| |||||||  ||||||    
T  28791321 taattagagttataattggagaaaagtaattaatgttgcattgaaaagtgaaatgggtcaagattcttggggacaatatttttttacaaatgggtcagtt 28791222  T
Q  107 attatgggacggagggagtata 128  Q
    |   ||||||||||||||||||    
T  28791221 aaactgggacggagggagtata 28791200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 12958276 - 12958385
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttt-ttacaaatgactcagttat 108  Q
    ||||||||||||| ||| ||||||  |||| ||| ||||||| |||| |||||||||    ||||||  ||||||||||| ||||||| |||||||||||    
T  12958276 taattagagttataattagaaaaaagtaattaatattgtattaaaaagtgaaatagaaagttattttaagacaatatttttttacaaaagactcagttat 12958375  T
Q  109 tatgggacgg 118  Q
    |||| |||||    
T  12958376 tatgagacgg 12958385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 14748800 - 14748919
Alignment:
Q  12 taattagagttatgattggaaaaa---taataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttta-caaatgactcagtt 106  Q
    ||||||| ||||| ||||||||||   |||| ||| |||||||||||| | |||| ||||||| ||| |||| |||||||||||  |||||| ||| |||    
T  14748800 taattagtgttataattggaaaaaaagtaattaatattgtattgaaaagtaaaatggatcaatttttctggaacaatatttttttgcaaatggctcggtt 14748899  T
Q  107 attatgggacggagggagta 126  Q
    |||| || ||||||||||||    
T  14748900 attacggaacggagggagta 14748919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 32967449 - 32967490
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  32967449 ttttttgcaaatgactcagttattatgggacggatggagtat 32967490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 32231814 - 32231932
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| |||||||||||| ||||||   ||||| ||||| |||||||| ||||||| |||||||||||  |    
T  32231814 taattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttttgggacaatatttttttataaatgactcag-aa 32231912  T
Q  108 ttatgggacggagggagtat 127  Q
    |||||| | |||||||||||    
T  32231913 ttatggaatggagggagtat 32231932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 32679048 - 32678949
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaata-ttttttacaaatgactcagtta 107  Q
    ||||||||||||| |||| |||||  |||| |||||||||||||||| |||||| | | || ||||||| ||||||| |||||||||||||  |||||||    
T  32679048 taattagagttataattgaaaaaaggtaattaatgttgtattgaaaagtgaaatgggtgaagatttttgagacaatatttttttacaaatgggtcagtta 32678949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 36012066 - 36012169
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatat-tttttacaaatgactcagtta 107  Q
    ||||||||||||| | ||||||||  |||| ||| |||||||||||| ||||||  ||||| | ||||| |||||||| ||||| ||||||||||| |||    
T  36012066 taattagagttataagtggaaaaaaataattaatattgtattgaaaagtgaaatgtatcaaaaattttgagacaatatatttttgcaaatgactcactta 36012165  T
Q  108 ttat 111  Q
    ||||    
T  36012166 ttat 36012169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 15020650 - 15020568
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||  |||||| ||||||| ||||| ||||||||||||||  ||||||||||| ||||||||||| ||| ||||||    
T  15020650 ttgtattgaaag-tgaaatggatcaattttttttggacaatatttttttgcaaatgactcacttattatgggatggatggagta 15020568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 20244761 - 20244682
Alignment:
Q  48 tattgaaaaatgaaatagatcaat-atttttggacaa-tattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| |||||||  ||||| ||||| |||||| |||||||||||||||  ||  |||||||||||||||||||||||    
T  20244761 tattgaaaagtgaaatatgtcaattattttgggacaaatattttttacaaatgggtc--ttattatgggacggagggagtat 20244682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 20248400 - 20248479
Alignment:
Q  48 tattgaaaaatgaaatagatcaat-atttttggacaa-tattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| |||||||  ||||| ||||| |||||| |||||||||||||||  ||  |||||||||||||||||||||||    
T  20248400 tattgaaaagtgaaatatgtcaattattttgggacaaatattttttacaaatgggtc--ttattatgggacggagggagtat 20248479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 139025 - 138928
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| ||| |||||||||||| ||||||   ||  | ||||| ||||| | |||||  |||||| |||||||||||||||||||| |||||||    
T  139025 aaaaataattaatattgtattgaaaagtgaaatgactcggttattttgggacattttttttcgcaaatggctcagttattatgggacggatggagtat 138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 12653613 - 12653580
Alignment:
Q  93 caaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||||||| |||||    
T  12653613 caaatgactcagttattatgggacggagagagta 12653580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 29615730 - 29615689
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||||||||||| ||||||||||||||||| |||||    
T  29615730 ttttttgcaaatgactcatttattatgggacggaggaagtat 29615689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 5878651 - 5878699
Alignment:
Q  80 acaatatttttta-caaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||||| ||||||||||| |||||||||||| || |||||||    
T  5878651 acaatattttttaacaaatgactcatttattatgggacagatggagtat 5878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 8394698 - 8394730
Alignment:
Q  94 aaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||| ||||||||||||||||||    
T  8394698 aaatgactcagttactatgggacggagggagta 8394730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 11637126 - 11637070
Alignment:
Q  36 taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttt 91  Q
    |||| ||| |||||||||||||| |||| ||||||| ||||| ||||||||||||||    
T  11637126 taattaatattgtattgaaaaataaaatggatcaatttttttaggacaatatttttt 11637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 34403192 - 34403108
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttt-acaaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||||| |||||| | | ||| ||||| |||||||||||||| ||||| | |||| |||||| |||||| |||||||||    
T  34403192 ttgtattgaaaagtgaaatgggtaaattattttaggacaatattttttcacaaaaggctcacttattacgggacgaagggagtat 34403108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 2886184 - 2886065
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| |||||||||||| |||||| ||||||| ||| ||| ||||||||||||  |||||||||||||||    
T  2886184 taattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaattgatcaatttttctgggacaatatttttttgcaaatgactcagtta 2886085  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||||||||||||||    
T  2886084 ttatgggacggagggagtat 2886065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 26924364 - 26924483
Alignment:
Q  12 taattagagttatgattggaaaaat--aataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactcagttat 108  Q
    ||||||| ||||| |||| ||||||  ||| ||| |||||||||||| ||||||  |||||| ||| ||| |||||||||||||||||||||||| ||||    
T  26924364 taattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggacaatattttttacaaatgactcaattat 26924463  T
Q  109 tatgggacggagggagtata 128  Q
    ||||||||||||||||||||    
T  26924464 tatgggacggagggagtata 26924483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 36232884 - 36233002
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattt-ttggacaatatttt-ttacaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| |||||| ||||||||| |||||||| ||||||||  || ||||||||||| |||||||||||||||||     
T  36232884 taattagagttataattggaaaaaagtaattaatgttttattgaaaactgaaataggtcaatattccttagacaatatttttttacaaatgactcagttg 36232983  T
Q  108 ttatgggacggagggagta 126  Q
    |||||| ||||||| ||||    
T  36232984 ttatggaacggaggaagta 36233002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 29225508 - 29225620
Alignment:
Q  18 gagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttt-ttacaaatgactcagttattatgg 113  Q
    ||||||| ||||||||||  |||| ||| |||||||| |||||||||| | | ||| ||||| |||||||||||| ||||||||| ||||||||||||||    
T  29225508 gagttataattggaaaaaagtaattaatattgtattggaaaatgaaatgggttaatttttttaggacaatatttttttacaaatggctcagttattatgg 29225607  T
Q  114 gacggagggagta 126  Q
    |||||||||||||    
T  29225608 gacggagggagta 29225620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 29225766 - 29225654
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt-acaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| | | |||||||||||| |||||| | ||||| ||||||| |||||||||||| ||||||||||||||||    
T  29225766 taattagagttataattggaaaaaagtaattattattgtattgaaaagtgaaatgggtcaatctttttgggacaatatttttttacaaatgactcagtta 29225667  T
Q  108 ttatgggacggag 120  Q
    ||||||| |||||    
T  29225666 ttatggggcggag 29225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 47293693 - 47293813
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaata-ttttttacaaatgactcagttat 108  Q
    |||||||| |||| |||| |||||  |||| |||||||| ||||||| ||||||  |||||||||||||||||||| ||||||||||||| |||| ||||    
T  47293693 taattagaattatcattgaaaaaaagtaattaatgttgttttgaaaagtgaaatgaatcaatatttttggacaatatttttttacaaatgtctcaattat 47293792  T
Q  109 tatgggacggagggagtatat 129  Q
    ||||  || ||||||||||||    
T  47293793 tatgcaacagagggagtatat 47293813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 26760175 - 26760051
Alignment:
Q  7 aatactaattagagttatgattggaaaaat--aataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactca 103  Q
    |||| ||||||| ||||| |||| ||||||  ||| ||| |||||||||||| ||||||  |||||| ||| ||| ||||||||||||||||||| ||||    
T  26760175 aatattaattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggacaatattttttacaaatggctca 26760076  T
Q  104 gttattatgggacggagggagtata 128  Q
     ||||||| |||||||| |||||||    
T  26760075 attattataggacggagtgagtata 26760051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 27210062 - 27210173
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaa---tattttttacaaatgactcagtta 107  Q
    ||||||||||||| |||||||||| |||| ||||||||||| |||| ||||| ||||||||| | || |||||   | |||||||||||||||| |||||    
T  27210062 taattagagttataattggaaaaaataattaatgttgtattcaaaagtgaaacagatcaatactcttagacaatttttttttttacaaatgacttagtta 27210161  T
Q  108 ttatgggacgga 119  Q
    ||||| ||||||    
T  27210162 ttatgagacgga 27210173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 50333948 - 50333830
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgactcagtta 107  Q
    ||||||||||||| |||  |||||  |||| |||||| ||||| ||| |||||| |||||| ||| ||| |||||||||||||  |||||||||||||||    
T  50333948 taattagagttataattaaaaaaaagtaattaatgttatattggaaagtgaaatggatcaagattcttgcgacaatatttttttgcaaatgactcagtta 50333849  T
Q  108 ttatgggacggagggagta 126  Q
    ||||||| |||||||||||    
T  50333848 ttatgggtcggagggagta 50333830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 14090634 - 14090538
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| ||||||||||||||||||| | ||||| ||| || ||||||||||| ||||||| |||| |||||||||| || |||||||||    
T  14090634 aaaagtaattaatattgtattgaaaaatgaaattggtcaatttttctgagacaatattttctacaaataactcggttattatggaacagagggagta 14090538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 24131495 - 24131613
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-aca-atattttttacaaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| ||| |||||||| |||||||  ||||| ||| ||| ||| || ||||||||||||||||||||||    
T  24131495 taattagtgttataattggaaaaaagtaattaatattgcattgaaaagtgaaataagtcaatttttctgggacatattttttttacaaatgactcagtta 24131594  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||| ||||||||||    
T  24131595 ttatgggac-gagggagtat 24131613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 26583741 - 26583626
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgactcagtta 107  Q
    ||||||| ||||| ||||||| ||  |||| ||| |||||||||||| |||||| | ||||| |||||| |||||||||||||  |||||  ||||||||    
T  26583741 taattagtgttataattggaataaagtaattaatattgtattgaaaagtgaaatgggtcaatttttttgagacaatatttttttgcaaatagctcagtta 26583642  T
Q  108 ttatgggacggaggga 123  Q
    ||||||||||||||||    
T  26583641 ttatgggacggaggga 26583626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 37541238 - 37541321
Alignment:
Q  36 taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgactcagttattatgggacg 117  Q
    |||| ||| |||||||||||| ||||||| |||||| ||| || |||||||||||||  |||||||||||||||||||||||||    
T  37541238 taattaatattgtattgaaaagtgaaataaatcaatctttctgagacaatatttttttgcaaatgactcagttattatgggacg 37541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 46363544 - 46363627
Alignment:
Q  48 tattgaaaaatgaaatagatcaatatttttgg-acaatatttt-ttacaaatgactcagttattatgggacggagggagtatat 129  Q
    ||||||||| ||||| | |||||| ||| ||| |||||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  46363544 tattgaaaagtgaaacaaatcaatttttctgggacaatattttattacaattgactcagttattatgggacggcgggagtatat 46363627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 3555650 - 3555762
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttat 108  Q
    ||||||||||||| |  |||||||  |||| |||| |||| ||||||||||||||  ||| | ||||| ||||| | ||| ||| |||||||||||||||    
T  3555650 taattagagttataaaaggaaaaaagtaattaatgatgtaatgaaaaatgaaataactcacttattttgggacactttttattaaaaatgactcagttat 3555749  T
Q  109 tatgggacggagg 121  Q
    |||||||||||||    
T  3555750 tatgggacggagg 3555762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 7787601 - 7787564
Alignment:
Q  93 caaatgactcagttattatgggacggagggagtatata 130  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7787601 caaatgactcagttattatgggacggagggagtatata 7787564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 15290482 - 15290393
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttt-acaaatgactcagttattatgggacgg 118  Q
    |||| |||| ||| |||||||||||| |||||||| |||||||| || || ||||||||||| | |||||||||||||||||| ||||||    
T  15290482 aaaagtaattaatattgtattgaaaagtgaaataggtcaatattcttagaacaatatttttttataaatgactcagttattataggacgg 15290393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 25983758 - 25983841
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttggacaatatttttta--caaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||||| |||||| | ||||| |||| ||||||||||||||   ||||||||||| ||||||| |||||||||||||||    
T  25983758 ttgtattgaaaagtgaaatgg-tcaattttttgggacaatattttttttccaaatgactcacttattataggacggagggagtat 25983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 29756237 - 29756358
Alignment:
Q  12 taattagagttatgattggaaaaa----taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta--caaatgactcag 104  Q
    ||||||| ||||| ||||||||||    |||| ||| |||||||||||| |||||| | ||||| ||| | ||||||||||||||   |||||| ||| |    
T  29756237 taattagtgttataattggaaaaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttctaggacaatattttttttgcaaatggctctg 29756336  T
Q  105 ttattatgggacggagggagta 126  Q
    ||||||||||||||||||||||    
T  29756337 ttattatgggacggagggagta 29756358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 5115914 - 5116039
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttt--ttacaaatgac 100  Q
    ||||| ||||||||| ||| ||| ||||||  ||||  ||||| ||||||||| ||||||  ||||||||| |||| ||||||||||  ||||||||||     
T  5115914 taatattaattagagctataatttgaaaaaagtaattgatgttatattgaaaagtgaaatgaatcaatattattgggacaatattttttttacaaatgat 5116013  T
Q  101 tcagttattatgggacggagggagtat 127  Q
    ||||||||||||| |||| ||||||||    
T  5116014 tcagttattatggaacgg-gggagtat 5116039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 5503395 - 5503319
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttt-acaaatgactcagttattatgggacgga 119  Q
    |||||||||||| ||||||   ||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  5503395 ttgtattgaaaagtgaaattagtcaatttttttgagacaatatttttttacaaatgactcagttattatgagacgga 5503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 31798437 - 31798311
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta--caaatgac 100  Q
    ||||| ||||||| ||||| ||||||||||  |||| ||| || ||||||||| |||||||| ||||| ||   || ||||||||||||   ||||||||    
T  31798437 taatattaattagtgttataattggaaaaaagtaattaatattatattgaaaagtgaaataggtcaattttcccgggacaatattttttttgcaaatgac 31798338  T
Q  101 tcagttattatgggacggagggagtat 127  Q
    ||||||||||||| |||| ||||||||    
T  31798337 tcagttattatggaacggtgggagtat 31798311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 16956396 - 16956278
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaa---tatttttggacaata-ttttttacaaatgactcagtt 106  Q
    ||||||||||||| |||| ||||| |||| ||| ||| ||||||||||||||| ||||||   | ||||| ||||||| |||||| ||||||||||  ||    
T  16956396 taattagagttataattgaaaaaagtaattaatattgcattgaaaaatgaaattgatcaatttttttttttgacaatatttttttgcaaatgactc--tt 16956299  T
Q  107 attatgggacggagggagtat 127  Q
    | |||| ||||||||||||||    
T  16956298 actatgtgacggagggagtat 16956278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 36057796 - 36057831
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtatat 129  Q
    ||||||||||||||||||||||||||||||||||||    
T  36057796 aaatgactcagttattatgggacggagggagtatat 36057831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 36326284 - 36326401
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttt-ttacaaatgactcagtta 107  Q
    |||||||| |||| |||||||| |  |||| |||||||||||||||| | ||||  || |||||| |||| |||||||||| ||||||||| || |||||    
T  36326284 taattagaattataattggaaagaagtaattaatgttgtattgaaaa-taaaatgaattaatattcttgggacaatatttttttacaaatggcttagtta 36326382  T
Q  108 ttatgggacggagggagta 126  Q
    ||||| |||||||||||||    
T  36326383 ttatgagacggagggagta 36326401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 16451644 - 16451524
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata--ttttttac-aaatgactcagt 105  Q
    |||||| |||||| ||||||||||  |||| |||||||||||||||| |||||| | |||| ||| || ||||||||  |||||||| |||||  ||| |    
T  16451644 taattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaagattcttaggacaatattttttttactaaatggatcaat 16451545  T
Q  106 tattatgggacggagggagta 126  Q
    |||||||| ||||||||||||    
T  16451544 tattatggaacggagggagta 16451524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 16460797 - 16460677
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata--ttttttacaaatgactcagtt 106  Q
    |||||| |||||| ||||||||||  |||| |||||||||||||||| |||||| | |||| ||| || ||||||||  |||||||||||||  ||| ||    
T  16460797 taattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaagattcttaggacaatattttttttacaaatggatcaatt 16460698  T
Q  107 attatggga-cggagggagta 126  Q
    ||||||| | |||||||||||    
T  16460697 attatggaaccggagggagta 16460677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 30903315 - 30903440
Alignment:
Q  5 ataatactaattagagttatgattgg--aaaaataataaatgttgtattgaaaaatgaaatagat-caatatttttggacaatat-tttttacaaatgac 100  Q
    |||||| ||||||||||||| |||||  ||||||||| ||| ||| |||||||| |||||| |||  ||| |||| ||||| ||| |||||| ||||||     
T  30903315 ataatattaattagagttataattggaaaaaaataattaatattgaattgaaaagtgaaatggataaaattttttgggacattatatttttataaatgat 30903414  T
Q  101 tcagttattatgggacggagggagta 126  Q
    ||| ||||||| ||||| ||||||||    
T  30903415 tcacttattataggacgaagggagta 30903440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 37281355 - 37281465
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatattt-tttacaaatgactcagttat 108  Q
    |||||| |||||| |||| ||||| |||| ||||||||||| ||||||||||| | |  ||||| ||| | |||||||| ||||||||||||| ||||||    
T  37281355 taattatagttataattgaaaaaagtaattaatgttgtattaaaaaatgaaatgggttgatattcttgaaacaatatttgtttacaaatgacttagttat 37281454  T
Q  109 tatgggacgga 119  Q
    ||| |||||||    
T  37281455 tataggacgga 37281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 8773230 - 8773141
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttta-caaatgactcagttattatgggacgg 118  Q
    |||| |||| ||| || |||||||||||||||||| ||| | ||||| ||||| | ||||||  ||||||||||||||||||||||||||    
T  8773230 aaaagtaattaatattctattgaaaaatgaaatagctcagttattttgggacactttttttttgcaaatgactcagttattatgggacgg 8773141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 12691917 - 12691816
Alignment:
Q  13 aattagagttatgattggaaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactcagttatta 110  Q
    |||||||||||| |||| ||||||| | |||||||||||||||| || |||   |||||||||||   |||||| |||||||| |||||||||||| |||    
T  12691917 aattagagttatcattgaaaaaatactcaatgttgtattgaaaactggaattattcaatatttttaaaacaatatttttttactaatgactcagttgtta 12691818  T
Q  111 tg 112  Q
    ||    
T  12691817 tg 12691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 27932958 - 27933015
Alignment:
Q  34 aataataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttttt 91  Q
    |||||| ||| |||||||||||| |||||| ||||||| | |||||||||||||||||    
T  27932958 aataattaatattgtattgaaaagtgaaatggatcaatttatttggacaatatttttt 27933015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2219543 - 2219659
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttatt 109  Q
    ||||||||||||| |  ||||||| |||| ||| |||||||||||| |||||| | ||||| ||||| |||||||  ||||| ||||||  ||  |||||    
T  2219543 taattagagttataaagggaaaaagtaattaatattgtattgaaaagtgaaatggttcaattattttgggacaattatttttgcaaatggttcgattatt 2219642  T
Q  110 atgggacggagggagta 126  Q
    ||||||| |||||||||    
T  2219643 atgggactgagggagta 2219659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 7310701 - 7310752
Alignment:
Q  73 tttttggacaatattttttac-aaatgactcagttattatgggacggaggga 123  Q
    |||||||||||||||||||   |||||||||||||||||||| |||||||||    
T  7310701 tttttggacaatatttttttgtaaatgactcagttattatggaacggaggga 7310752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 21304299 - 21304225
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacgga 119  Q
    ||||||| |||||||||||   ||||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  21304299 ttgtattaaaaaatgaaatgagtcaattattttaggacaatattttt-acaaaaggctcagttattatgggacgga 21304225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 32347957 - 32347839
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgactcagtta 107  Q
    ||||||||||||| |  |||||||  |||| |||| ||||||||||| |||||||| ||| | || || ||||||| |||| ||  ||||| || |||||    
T  32347957 taattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctcacttatattgggacaattttttattgaaaatggcttagtta 32347858  T
Q  108 ttatgggacggagggagta 126  Q
    |||||||||||||||||||    
T  32347857 ttatgggacggagggagta 32347839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 36058924 - 36058959
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||||||||||||||| |||||||||||||    
T  36058924 aaatgactcagttattatgggaaggagggagtatat 36058959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 116
Target Start/End: Complemental strand, 37495760 - 37495730
Alignment:
Q  86 ttttttacaaatgactcagttattatgggac 116  Q
    |||||||||||||||||||||||||||||||    
T  37495760 ttttttacaaatgactcagttattatgggac 37495730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 45049024 - 45048923
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt--acaaatgactcagttattatgggacggagggagtat 127  Q
    |||| |||| |||||||||||||||| ||||||   |||| ||| |||| ||||||||||||  |||||||| |||||||   ||||||||| |||||||    
T  45049024 aaaagtaattaatgttgtattgaaaattgaaatgagtcaaaattcttgggacaatattttttttacaaatgagtcagttaaactgggacggaaggagtat 45048925  T
Q  128 at 129  Q
    ||    
T  45048924 at 45048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 705438 - 705526
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaatatttttt 91  Q
    ||||| |||||||||||||  |||||||||  |||| ||| || ||||||||| ||||||||||||| | |||| ||||||| ||||||    
T  705438 taatattaattagagttatatttggaaaaaaataattaatattatattgaaaagtgaaatagatcaattcttttgggacaatttttttt 705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 20988570 - 20988630
Alignment:
Q  5 ataatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaat 63  Q
    |||||| ||||||||||||| |||| |||||  |||| |||||||||||||||| ||||||    
T  20988570 ataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaat 20988630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 26040654 - 26040571
Alignment:
Q  12 taattagagttatgattggaaaaa---taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaatatttttt 91  Q
    ||||||||||||| ||||||||||   |||| |||||  ||||||||| |||||| | |||||||| || ||||||||||||||    
T  26040654 taattagagttataattggaaaaaaagtaattaatgtaatattgaaaagtgaaatgggtcaatattcttgggacaatatttttt 26040571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 52147233 - 52147274
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  52147233 ttttttacaaatgactcggttattattggacggagtgagtat 52147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 7075498 - 7075586
Alignment:
Q  12 taattagagttatgattggaaaaataa-taaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatg 98  Q
    ||||||||||||| |||| ||||| || | |||||||||||||||| |||||| | |||| ||| ||| ||| || |||||||||||||    
T  7075498 taattagagttataattgaaaaaaaaaattaatgttgtattgaaaagtgaaatgggtcaagattcttgagactattttttttacaaatg 7075586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 10587755 - 10587795
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| | ||||||||||||||||||||||||| ||||||    
T  10587755 ttttttgctaatgactcagttattatgggacggaaggagta 10587795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 45889432 - 45889464
Alignment:
Q  94 aaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||||||||||| |||||||||    
T  45889432 aaatgactcagttattatgggaccgagggagta 45889464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 52382475 - 52382596
Alignment:
Q  6 taatactaattagagttatgattggaaaaa---taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaat--attttttacaaatga 99  Q
    ||||| ||||||||||||| |||| |||||   |||| |||||||||||||||| |||||| | |||| |||| ||| | |||   |||||||||||| |    
T  52382475 taatattaattagagttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatgggtcaagatttctggaataattatttttttacaaataa 52382574  T
Q  100 ctcagttattatgggacggagg 121  Q
    ||| ||||||||| || |||||    
T  52382575 ctcggttattatgagatggagg 52382596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 37496491 - 37496611
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagtta 107  Q
    |||||| |||||| ||||||||||  |||| |||||||| ||||||| |||||| | ||||| ||||||| | ||||||||||  |||||||||||||||    
T  37496491 taattaaagttataattggaaaaaagtaattaatgttgtgttgaaaagtgaaatgggtcaatttttttgggataatatttttttgcaaatgactcagtta 37496590  T
Q  108 ttatgggacggagggagtata 128  Q
    |||||||||||||||||||||    
T  37496591 ttatgggacggagggagtata 37496611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 18731455 - 18731337
Alignment:
Q  12 taattagagttatgattggaaaaat--aataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt-acaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||   ||| |||||||||||| ||| |||||| |||||| |||  ||| |||||||||||| ||||| ||||||||||    
T  18731455 taattagagttataattggaaaaaagcaattaatgttgtattggaaactgaaatggatcaagattactgggacaatatttttttacaaacgactcagtta 18731356  T
Q  108 ttatgggacggagggagta 126  Q
    | |||||||||||||||||    
T  18731355 tcatgggacggagggagta 18731337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 3667965 - 3668090
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttt-ttacaaatgact 101  Q
    ||||| |||||||| ||||  |||||||||  |||| | |||||||||||||| |||||| | ||||| ||||| |||||||||||| ||||||||||||    
T  3667965 taatattaattagaattatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgggtcaatttttttaggacaatatttttttacaaatgact 3668064  T
Q  102 cagttattatgggacggagggagtat 127  Q
    ||||||||| || ||||| |||||||    
T  3668065 cagttattacggaacggatggagtat 3668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 5068386 - 5068511
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatat-tttttacaaatgact 101  Q
    ||||| ||||||||||||| ||||||||||  |||| | | ||||||| |||| ||||||   |||||||| |||| ||||||| |||||||||||||||    
T  5068386 taatattaattagagttataattggaaaaaagtaattagtattgtattaaaaagtgaaatgagtcaatattcttgggacaatatatttttacaaatgact 5068485  T
Q  102 cagttattatgggacggagggagtat 127  Q
    || ||||||||||||| |||||||||    
T  5068486 cacttattatgggacgaagggagtat 5068511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 30659574 - 30659678
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttt-ttacaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||| |||||| | |||| ||| || |||||||||||| |||||||||| |||||||    
T  30659574 taattagagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaagattcttaggacaatatttttttacaaatgattcagtta 30659673  T
Q  108 ttatg 112  Q
    |||||    
T  30659674 ttatg 30659678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 39343765 - 39343867
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatgactcagttat 108  Q
    ||||||||||||| |||| ||||   |||| ||| |||||||||||| |||||| | | |||||||||| |||||||||||||||||||| |||||||||    
T  39343765 taattagagttataattgaaaaagggtaattaatattgtattgaaaagtgaaatggttaaatatttttgagacaatattttttacaaatggctcagttat 39343864  T
Q  109 tat 111  Q
    |||    
T  39343865 tat 39343867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 32775993 - 32775876
Alignment:
Q  15 ttagagttatgattggaaaaa--taataaatgtt-gtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttatt 109  Q
    |||||||||| ||||||||||  |||| ||| || |||||| ||| |||||| | ||||| ||||||| ||||||||||||  |||||| ||||||||||    
T  32775993 ttagagttataattggaaaaaagtaattaatatttgtattggaaagtgaaatgggtcaatttttttgggacaatatttttttgcaaatgcctcagttatt 32775894  T
Q  110 atgggacggagggagtat 127  Q
    ||||||||||||||||||    
T  32775893 atgggacggagggagtat 32775876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 30462673 - 30462553
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactcagtta 107  Q
    ||||||||||||| |||| |||||  |||| |||||||||||||||| |||||||  |||| |||||| | |||||| |||||||||||||||||| |||    
T  30462673 taattagagttataattgaaaaaaaataattaatgttgtattgaaaattgaaataagtcaagatttttagaacaatatttttttacaaatgactcaatta 30462574  T
Q  108 ttatgggacggagggagtata 128  Q
    |||  ||||||| | ||||||    
T  30462573 ttaaaggacggatgaagtata 30462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 28333190 - 28333064
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt--ggacaatatttttt-acaaatgac 100  Q
    ||||| |||||||||||||  |||||||||  |||| | |||||||||||||| ||||||  |||||| |||||  |||||||||||||| ||||||||     
T  28333190 taatattaattagagttatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgaatcaatttttttgaggacaatattttttgacaaatgag 28333091  T
Q  101 tcagttattatgggacggagggagtat 127  Q
     ||||||||| || || ||||||||||    
T  28333090 gcagttattacggaacagagggagtat 28333064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 8149978 - 8149905
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt 77  Q
    ||||| ||||||||||||| ||||||||||  |||| ||| |||||||||||||||||||  ||||||||||||    
T  8149978 taatattaattagagttataattggaaaaaagtaattaatattgtattgaaaaatgaaatgaatcaatattttt 8149905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 32346462 - 32346408
Alignment:
Q  73 tttttggacaatattttt-tacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  32346462 tttttggacaatatttttatgcaaatgactcacttattatgggacggagggagta 32346408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 47238230 - 47238113
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttat 108  Q
    ||||||| ||||| |||||||||  |||| ||| |||||||||||| |||||| | ||||| ||| ||| ||||||||||||  |||||| |||| ||||    
T  47238230 taattagtgttataattggaaaaggtaattaatattgtattgaaaattgaaattggtcaatttttctgggacaatatttttttgcaaatggctcaattat 47238131  T
Q  109 tatgggacggagggagta 126  Q
    ||||||||||||| ||||    
T  47238130 tatgggacggaggtagta 47238113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 12308397 - 12308274
Alignment:
Q  6 taatactaattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatgactca 103  Q
    ||||| ||||||||||||| | || ||||| |||| ||| |||||||||||| ||||||   ||| |  ||||| |||| | |||||| ||||||||||     
T  12308397 taatattaattagagttataaatgaaaaaagtaattaatattgtattgaaaattgaaatgactcagttattttgagacattttttttttcaaatgactcg 12308298  T
Q  104 gttattatgggacggagggagtat 127  Q
    |||||| |||||||||||||||||    
T  12308297 gttattgtgggacggagggagtat 12308274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 27337961 - 27338084
Alignment:
Q  6 taatactaattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata-ttttttacaaatgactc 102  Q
    ||||| |||||| |||||| |||||||||| |||| |||||||||||||||| |||||| | | |||||| || ||| |||| |||||||||| |  |||    
T  27337961 taatattaattaaagttataattggaaaaaataattaatgttgtattgaaaagtgaaatgggttaatattcttaggataatatttttttacaattagctc 27338060  T
Q  103 agttattatgggacggagggagta 126  Q
    |||||||||| |||| || |||||    
T  27338061 agttattatgagacgtagagagta 27338084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 9658815 - 9658731
Alignment:
Q  46 tgtattgaaaaatgaaatagatcaatatttttggacaatatttttta--caaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||||| |||||||  ||||| |||| ||| ||||||||||   |||||||||||||| |||| ||||||| ||||||||    
T  9658815 tgtattgaaaagtgaaataagtcaattttttaggataatattttttttgcaaatgactcagttgttataggacggatggagtata 9658731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 25778715 - 25778631
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttac--aaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| |||||||  ||||| |||||| |||||||||||||    ||||||| |||||||||||||||||||| ||||    
T  25778715 ttgtattgaaaagtgaaataagtcaatttttttgagacaatattttttttgaaaatgacccagttattatgggacggaggaagta 25778631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 29257566 - 29257442
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgact 101  Q
    ||||| ||||||||||||| |  |||||||  |||| |||| ||||||||||| |||||||| ||| | ||||| ||||| | |||| ||  ||||||||    
T  29257566 taatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctcacttattttgggacacttttttattgaaaatgact 29257467  T
Q  102 cagttattatgggacggagggagta 126  Q
    ||||||||||| |||||| ||||||    
T  29257466 cagttattatgagacggatggagta 29257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 34064159 - 34064110
Alignment:
Q  78 ggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  34064159 ggacaatatttttttgcaaatgactaagttattatgggacggagggagta 34064110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 34963987 - 34964028
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  34963987 ttttttacaaatgactcagttattatgagacggatggagtat 34964028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 39498693 - 39498569
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttt-acaaatgact 101  Q
    ||||| |||||||| |||| ||| ||||||  |||| ||| ||| ||||||||  ||||||| ||| | |||||  ||||||||||||| ||||| | ||    
T  39498693 taatattaattagaattataattagaaaaaagtaattaatattgcattgaaaagagaaataggtcagttattttatgacaatatttttttacaaaaggct 39498594  T
Q  102 cagttattatgggacggagggagta 126  Q
    |||||||||||| ||||||||||||    
T  39498593 cagttattatggaacggagggagta 39498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 2846856 - 2846888
Alignment:
Q  94 aaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||||||||||||    
T  2846856 aaatgactcagttattatgggacggagggagta 2846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 7425994 - 7426089
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| |||||||||||| |||||| | ||| | ||||| ||||| | |||||| |||||| |||||||||| ||||||||||||||||    
T  7425994 aaaagtaattaatattgtattgaaaagtgaaatggctcagttattttgggacact-ttttttgcaaatggctcagttattgtgggacggagggagta 7426089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 30462951 - 30462911
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  30462951 ttttttgcaaatgactcaattattatgggacggagggagta 30462911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 31581621 - 31581661
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  31581621 ttttttgcaaatgactcagttattatgggacggagagagta 31581661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 46288525 - 46288640
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttat 108  Q
    ||||||||||||| |  |||||||  |||| ||| || ||||||||| |||||| | ||| | ||||| ||||| | ||||||||||||||||| |||||    
T  46288525 taattagagttataaagggaaaaaattaattaatattatattgaaaagtgaaatggctcagttattttgggacatttttttttacaaatgactcggttat 46288624  T
Q  109 tatgggacggagggag 124  Q
    | ||| ||||||||||    
T  46288625 tgtggaacggagggag 46288640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 5724889 - 5724924
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||||||||||||| |||||||||||||||    
T  5724889 aaatgactcagttattatggaacggagggagtatat 5724924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 2842220 - 2842258
Alignment:
Q  88 ttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  2842220 ttttacaaatgactcagttattatgagacggagagagta 2842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 33584489 - 33584455
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtata 128  Q
    ||||| |||||||||||||||||||||||||||||    
T  33584489 aaatgcctcagttattatgggacggagggagtata 33584455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 44341086 - 44341007
Alignment:
Q  48 tattgaaaaatgaaatagatcaat-atttttggacaa-tattttttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| |||||||  ||||| ||||| |||||| |||||||||||||||  ||  |||||||||||||||||||||||    
T  44341086 tattgaaaagtgaaatatgtcaattattttgggacaaatattttttacaaatgggtc--ttattatgggacggagggagtat 44341007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 11616490 - 11616449
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| |||||| |||||||||||||||| |||||||||||    
T  11616490 ttttttgcaaatggctcagttattatgggatggagggagtat 11616449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 21387776 - 21387816
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||| |||||||||||||||||| | ||||||    
T  21387776 ttttttacaaatgcctcagttattatgggacgaaaggagta 21387816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 46095618 - 46095662
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtatata 130  Q
    |||||| |||| |||| |||||||||||||||||| |||||||||    
T  46095618 ttttttgcaaacgacttagttattatgggacggagagagtatata 46095662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 20964409 - 20964510
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttattatgggacggagggagtata 128  Q
    |||| |||| ||| |||||||||||| |||||||| ||||| ||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20964409 aaaagtaattaatattgtattgaaaagtgaaataggtcaatttttctgggacaatatttttttgcaaatgactcagttattatgggacggagggagtata 20964508  T
Q  129 ta 130  Q
    ||    
T  20964509 ta 20964510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 4360502 - 4360619
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaata-ttttttacaaatgactcagttat 108  Q
    |||||||||||||  |||||||||  |||| |||||||||||||||| |||||| | ||||| ||||  ||||||| ||||||  ||||| |||||||||    
T  4360502 taattagagttatatttggaaaaaagtaattaatgttgtattgaaaagtgaaattggtcaattttttgtgacaatatttttttgtaaatggctcagttat 4360601  T
Q  109 tatgggacggagggagta 126  Q
    ||||||||||||||||||    
T  4360602 tatgggacggagggagta 4360619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 5291681 - 5291601
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactcagttattat 111  Q
    |||| |||| ||| |||||||||||| |||||| | ||||| |||| |||||||||||||||||||||||||| |||||||    
T  5291681 aaaagtaattaatattgtattgaaaagtgaaatgggtcaattttttgggacaatattttttacaaatgactcacttattat 5291601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 53848324 - 53848228
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| ||| |||||||||||| |||||| | ||||| || |  |||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  53848324 aaaaataattaatattgtattgaaaagtgaaatgggtcaattttctgagacaatatttttttgcaaatgactcagttattatgggatggagggagta 53848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 3505698 - 3505630
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactcagttattatgg 113  Q
    ||||||||||||||||||| ||||||| |||| | | |||||||||||||||| |||||| ||||||||    
T  3505698 ttgtattgaaaaatgaaattgatcaattttttagaataatattttttacaaataactcagatattatgg 3505630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 37316016 - 37316139
Alignment:
Q  12 taattagagttatgattggaaaaat--aataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatattttttacaaa-tgactcagtta 107  Q
    ||||||| ||||| |||||||||||  ||| ||| |||||||||||| |||||| ||||||| ||| || | |||||||||||  ||| ||||||| |||    
T  37316016 taattagtgttataattggaaaaatgtaattaatattgtattgaaaagtgaaatggatcaatttttctgaaacaatatttttttgaaaatgactcaatta 37316115  T
Q  108 ttatgggacggagggagtatatac 131  Q
    ||||  ||||||||||||||||||    
T  37316116 ttataagacggagggagtatatac 37316139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 41436494 - 41436375
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatc-aatatttttggacaatattttt-tacaaatgactcagtta 107  Q
    ||||||||||||| ||| ||||||  |||| ||| |||||||||||| |||||| | ||   |||||| ||||||||||||| ||||||   ||||||||    
T  41436494 taattagagttataattagaaaaaaataattaatattgtattgaaaagtgaaattggtcggttattttaggacaatatttttctacaaaaagctcagtta 41436395  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||||||||||||||    
T  41436394 ttatgggacggagggagtat 41436375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 44633170 - 44633048
Alignment:
Q  12 taattagagttatgattggaaaaa---taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata-ttttttacaaatgactcagtt 106  Q
    ||||||||||||| ||||||||||   |||| |||||||||||||||| ||||||   |||| ||| || |||| ||| ||||||||||||| ||| |||    
T  44633170 taattagagttataattggaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaagattcttgggactatatttttttacaaatggctccgtt 44633071  T
Q  107 attatgggacggagggagtatat 129  Q
    ||||| ||| |||||||||||||    
T  44633070 attataggatggagggagtatat 44633048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 9093905 - 9093948
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  9093905 ttttttacaaatgactcagttattatgggacggaaggagtatat 9093948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 8974680 - 8974594
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttttacaaatgactcagttattatgggac 116  Q
    |||| |||| ||| || ||||||||| |||||||  ||||| ||||||| |||||||||||||||||||||||| ||||||| ||||    
T  8974680 aaaagtaattaatattatattgaaaactgaaataagtcaatttttttgggacaatattttttacaaatgactcacttattataggac 8974594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 21954833 - 21954917
Alignment:
Q  46 tgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta--caaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||| |||||| | ||||| ||||||| ||||||||||||   ||||||||||| ||||||||| |||||||||||||    
T  21954833 tgtattgaaaagtgaaattggtcaatttttttgggacaatattttttttgcaaatgactcacttattatggtacggagggagtat 21954917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 39258448 - 39258488
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  39258448 ttttttacaaatgactcagttattatgggatggagggagta 39258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 25390644 - 25390609
Alignment:
Q  93 caaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  25390644 caaatgactcagttattatgggacggagggagtata 25390609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 47386611 - 47386698
Alignment:
Q  41 aatgttgtattgaaaaatgaaatagatcaatatttttggacaatatttttta---caaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||  ||||||   ||||| |||| ||||||||||||||    ||||||||||| ||||||||||||||||||||||    
T  47386611 aatgttgtattgaaag-tgaaatgagtcaattttttgggacaatatttttttttgcaaatgactcacttattatgggacggagggagta 47386698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 51572342 - 51572440
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgactcagttattatgggacggagggagtat 127  Q
    ||||| ||| ||| |||||||||||| |||||||  ||||| ||||| |||||||||||| ||||||| |  ||||||||||||||||| | |||||||    
T  51572342 aaaaaaaattaatattgtattgaaaagtgaaataagtcaattattttaggacaatatttttttacaaaaggttcagttattatgggacgaacggagtat 51572440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 13529839 - 13529755
Alignment:
Q  46 tgtattgaaaaatgaaatagatcaatatttttggacaatatttttta--caaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||||| |||||||  ||||| |||| ||| ||||||||||   |||||||||||||| |||| ||||||| ||||||||    
T  13529839 tgtattgaaaagtgaaataagtcaattttttaggataatattttttttgcaaatgactcagttgttataggacggatggagtata 13529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 28330784 - 28330687
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| |||||||||||| |||||| | ||||| ||| ||| ||| ||||||||  ||||||  ||||||||||||||||||||||||||    
T  28330784 aaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttatgggacagtatttttttgcaaatgggtcagttattatgggacggagggagta 28330687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 36047216 - 36047308
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttt--tacaaatgactcagttattatgggacggag 120  Q
    |||| |||| ||| |||||||||||| ||||||   ||||| ||| || ||||||||||||  | ||||||||||||||||||||||||||||    
T  36047216 aaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttctgagacaatatttttcttgcaaatgactcagttattatgggacggag 36047308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 41710232 - 41710356
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttt-ttacaaatgact 101  Q
    ||||| ||||||||||||| |  |||||||  |||| |||| ||||||||||| |||||||| ||| | ||||| ||||| | |||| ||  ||||||||    
T  41710232 taatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctcacttattttgggacacttttttattgaaaatgact 41710331  T
Q  102 cagttattatgggacggagggagta 126  Q
    ||||||||||| |||||| ||||||    
T  41710332 cagttattatgagacggatggagta 41710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 42132832 - 42132708
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaata-ttttttacaaatgact 101  Q
    ||||| ||||||| ||||| ||||||||||  |||| ||| |||||||||||  ||||| |  ||||| |||| || |||||| |||||| |||||||||    
T  42132832 taatattaattagtgttataattggaaaaaagtaattaatattgtattgaaatgtgaaacaagtcaattttttcgggacaataattttttgcaaatgact 42132733  T
Q  102 cagttattatgggacggagggagta 126  Q
    ||||||||||| || | ||||||||    
T  42132732 cagttattatgagatgtagggagta 42132708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 41594876 - 41594920
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtatata 130  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  41594876 ttttttgcaaatggctcacttattatgggacggagggagtatata 41594920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 42051830 - 42051870
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  42051830 ttttttacaaatggctcagttattacgggacggagggagta 42051870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 48740456 - 48740416
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  48740456 ttttttgcaaatgactcagttattatgagacggagggagta 48740416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 29550821 - 29550903
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaatatttttt 91  Q
    ||||||||||||| |||| |||||  |||| |||||||||||||||| |||||| | |||| ||| || ||||||||||||||    
T  29550821 taattagagttataattgaaaaaaggtaattaatgttgtattgaaaagtgaaatgggtcaagattcttgggacaatatttttt 29550903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 35998298 - 35998333
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtatat 129  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35998298 aaatgactccgttattatgggacggagggagtatat 35998333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 42024381 - 42024412
Alignment:
Q  94 aaatgactcagttattatgggacggagggagt 125  Q
    ||||||||||||||||||||||||||||||||    
T  42024381 aaatgactcagttattatgggacggagggagt 42024412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 13719817 - 13719749
Alignment:
Q  48 tattgaaaaatgaaatagatcaatattttt-ggacaatatttttta---caaatgactcagttattatg 112  Q
    ||||||||| |||||||| |||||||| || ||||||||||||||    ||||||||||||||||||||    
T  13719817 tattgaaaagtgaaataggtcaatattcttaggacaatatttttttttgcaaatgactcagttattatg 13719749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 46958735 - 46958615
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt--ggacaatattttt-tacaaatgactcagtt 106  Q
    ||||| || |||| ||||||||||  |||| | |||||||  ||||| |||||| | ||||| |||||  || |||||||||| | |||||| || ||||    
T  46958735 taatttgaattataattggaaaaaagtaattattgttgtaccgaaaagtgaaatgggtcaattttttttggggcaatatttttatgcaaatggcttagtt 46958636  T
Q  107 attatgggacggagggagtat 127  Q
    |||||||||||||||||||||    
T  46958635 attatgggacggagggagtat 46958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 18849847 - 18849967
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactc 102  Q
    ||||| ||||||||||||| |  |||||||  |||| ||| || ||||||||| ||||||   ||| | ||||| ||||| | ||||||||||||| |||    
T  18849847 taatattaattagagttataaagggaaaaaagtaattaatattttattgaaaagtgaaatgactcagttattttgggacatttttttttacaaatggctc 18849946  T
Q  103 agttattatgggacggaggga 123  Q
    | ||||| |||||||||||||    
T  18849947 aattattgtgggacggaggga 18849967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Original strand, 32950012 - 32950045
Alignment:
Q  76 ttggacaatattttttacaaatgactcagttatt 109  Q
    |||||||||||||||||||||| |||||||||||    
T  32950012 ttggacaatattttttacaaataactcagttatt 32950045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 39053082 - 39053115
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||||||||||||| |||||||||||||    
T  39053082 aaatgactcagttattatggaacggagggagtat 39053115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 39976506 - 39976603
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatat-tttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| ||| |||||||||||||||   ||| ||||||| ||||| | | ||||| |||||||||||||||||||| ||||||| |||||    
T  39976506 aaaagtaattaatattgcattgaaaaatgaaatgactcagatattttgggacactttgtttttgcaaatgactcagttattatgagacggagtgagta 39976603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 42670553 - 42670594
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| |||||||||||||||||||| ||||||| ||||||    
T  42670553 ttttttgcaaatgactcagttattatgagacggagcgagtat 42670594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 44022001 - 44022062
Alignment:
Q  36 taataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaatattttttacaaa 96  Q
    |||| ||| |||||||||||| |||||| |||||| ||||||  ||||||||||||||||||    
T  44022001 taattaatattgtattgaaaattgaaatggatcaattattttaagacaatattttttacaaa 44022062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 49218938 - 49218991
Alignment:
Q  76 ttggacaatattttt-tacaaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||||||||| |  ||||| ||||||||||||||||| |||||||||||    
T  49218938 ttggacaatatttttgtgaaaatggctcagttattatgggactgagggagtata 49218991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 29644306 - 29644266
Alignment:
Q  71 tatttttggacaatattttttacaaatgactcagttattat 111  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  29644306 tattttgggacaattttttttgcaaatgactcagttattat 29644266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 49812221 - 49812125
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| ||| |||||||||||| ||||||   |||  |||||| ||||| | |||||| ||||| ||||  ||||||||||||| ||||||||    
T  49812221 aaaaataattaatattgtattgaaaagtgaaatgactcagttattttgggacatttttttttgcaaataactctattattatgggacgaagggagta 49812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 53815939 - 53815979
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||| |||||||||||| ||||||||||||||| ||||||    
T  53815939 tttttaacaaatgactcatttattatgggacggaaggagta 53815979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 41287023 - 41286947
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactcagttattatgggacggagg 121  Q
    |||||||||||| |||||| ||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  41287023 ttgtattgaaaagtgaaatggatcaattttttgggacaatattttttgcaaatgactcatttattatgggacggagg 41286947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 48409597 - 48409482
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttt-acaaatgactcagtta 107  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||| |||||| | |||| |||  | |||||||||||||| ||||||| ||||||||    
T  48409597 taattagagttataattggaaaaaagtaattaatgttgtattgaaaactgaaatgggtcaagattcctaggacaatatttttttacaaatggctcagtta 48409498  T
Q  108 ttatgggacggaggga 123  Q
    ||| ||||||||||||    
T  48409497 ttacgggacggaggga 48409482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 37042005 - 37042087
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttg-gacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| | ||||  ||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  37042005 ttgtattgaaaagttaaatgcatcaagatttttgagacaatattttttacaaataacttagttattatgggacggagggagta 37042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 30261596 - 30261715
Alignment:
Q  12 taattagagttatgatt-ggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagtta 107  Q
    ||||||||||||| ||| ||||||| |||| | | |||||||||||| |||||| | ||||| ||||||| ||||||||||||  |||||| ||||||||    
T  30261596 taattagagttataattaggaaaaagtaattattattgtattgaaaagtgaaatgggtcaatttttttgggacaatatttttttgcaaatggctcagtta 30261695  T
Q  108 ttatgggacggagggagtat 127  Q
    ||||||||| ||||||||||    
T  30261696 ttatgggacagagggagtat 30261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 39329844 - 39329962
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta-caaatgactcagtta 107  Q
    |||||||| |||| ||||||||||  |||| | |||||||||||||| ||||||   ||||  ||||| ||||||||||||||  ||||||||||| |||    
T  39329844 taattagaattataattggaaaaaagtaattattgttgtattgaaaagtgaaatgagtcaacttttttaggacaatatttttttgcaaatgactcattta 39329943  T
Q  108 ttatgggacggagggagta 126  Q
    |||||||||||||||||||    
T  39329944 ttatgggacggagggagta 39329962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 53754180 - 53754279
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaata-ttttttacaaatgactcagttattatgggacggagggagtata 128  Q
    ||||||||| |||||||||||||||| ||||||   |||| |||  || ||||||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  53754180 aaaaataattaatgttgtattgaaaactgaaatgagtcaagattactgtgacaataattttttataaatgactcagttattatgggacggagcgagtata 53754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 1334947 - 1334992
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtatatac 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  1334947 ttttttgcaaatgactcagttattatgggacggagggagtatatac 1334992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 46194300 - 46194418
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatattttt-tacaaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| |||||||||||| |||||| | ||||| ||| ||| ||||||||||| |  ||||| |||||||     
T  46194300 taattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttctgggacaatatttttctgaaaatggctcagttg 46194399  T
Q  108 ttatgggacggagggagta 126  Q
    |||||||||||||||||||    
T  46194400 ttatgggacggagggagta 46194418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 38600900 - 38601018
Alignment:
Q  12 taattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatatttttta-caaatgactcagttat 108  Q
    ||||||||||||| | |||||| | |||| ||| |||||||||||  ||||||   ||||| ||||| | ||||| ||||||  ||||||||||||||||    
T  38600900 taattagagttataaatggaaagagtaattaatattgtattgaaaggtgaaatgactcaattattttagaacaatttttttttgcaaatgactcagttat 38600999  T
Q  109 tatgggacggagggagtat 127  Q
    |||||||||||||||||||    
T  38601000 tatgggacggagggagtat 38601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 24619000 - 24619126
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatt---ttttacaaatga 99  Q
    ||||| ||||||||||||| || |||||||  |||| |||  |||||| |||| |||||| |||||||  ||||| |||||||||   |||| |||||||    
T  24619000 taatattaattagagttataatcggaaaaaaataattaatactgtattaaaaagtgaaatggatcaattattttgcgacaatattgttttttgcaaatga 24619099  T
Q  100 ctcagttattatgggacggagggagta 126  Q
    |||||||| |||| |||||||||||||    
T  24619100 ctcagttagtatgagacggagggagta 24619126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 1923070 - 1922990
Alignment:
Q  48 tattgaaaaatgaaatagatcaatatttttgg-acaatattt-tttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||| ||| |||||| ||||||| ||| ||| ||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  1923070 tattgtaaagtgaaatggatcaatttttctgggacaatatttctttgcaaatggctcagttattatgggacggagggagta 1922990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 9218091 - 9218039
Alignment:
Q  76 ttggacaatatttttta-caaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  9218091 ttggacaatatttttttgcaaatgactcagttattacgggacggagggagtat 9218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 47496121 - 47496072
Alignment:
Q  78 ggacaatatttttt-acaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  47496121 ggacaatatttttttacaaatgactcagttattacaggacggagggagta 47496072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 42547222 - 42547320
Alignment:
Q  32 aaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta--caaatgactcagttattatgggacggagggagtat 127  Q
    |||||||| | |||||||||||||| ||||||   ||||| ||||||| ||||||||||||   || |||||||||||||||||| | |||||| ||||    
T  42547222 aaaataattattgttgtattgaaaagtgaaatgagtcaatttttttgggacaatattttttttgcagatgactcagttattatggaatggagggggtat 42547320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 12744802 - 12744708
Alignment:
Q  34 aataataaatgttgtattgaaaaatgaaatagatcaa-tatttttggacaatattttttacaaa-tgactcagttattatgggacggagggagta 126  Q
    |||||| ||| ||| |||||||| |||||| | |||| |||||| ||||| | | ||||| ||| || |||||||||||||||||||||||||||    
T  12744802 aataattaatattgcattgaaaagtgaaatggctcaaatattttgggacactttgttttagaaaatggctcagttattatgggacggagggagta 12744708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 39365132 - 39365230
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttac-aaatgactcagttattatgggacggagggagtat 127  Q
    |||| |||| ||| |||||||||||| |||||| | ||| | ||||| ||||| | ||||||   ||||| ||||||||||||||||||||||||||||    
T  39365132 aaaagtaattaatattgtattgaaaattgaaatggctcagttattttgggacacttttttttggtaaatggctcagttattatgggacggagggagtat 39365230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 45746343 - 45746261
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgactcagttattatgggacggagggagt 125  Q
    |||||||||||| |||||||  ||||| |||||| |||||||||||||  ||||||| ||||||||||||  |||||| ||||    
T  45746343 ttgtattgaaaactgaaataagtcaatttttttgtgacaatatttttttgcaaatgaatcagttattatgaaacggagagagt 45746261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 2868566 - 2868505
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatatttttt 91  Q
    ||||||||| ||| |||||||||||| |||||| |||||  |||||| ||||||||||||||    
T  2868566 aaaaataattaatattgtattgaaaagtgaaatggatcagttattttaggacaatatttttt 2868505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 26480290 - 26480331
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||||| |||| ||||||||| ||||||||||||||    
T  26480290 ttttttacaaataactcggttattatgagacggagggagtat 26480331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 26832034 - 26832001
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtat 127  Q
    |||||||||| |||||||||||||||||||||||    
T  26832034 aaatgactcatttattatgggacggagggagtat 26832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 32023272 - 32023313
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||| ||||||||||||||||||||| |||||||||    
T  32023272 ttttttgcaattgactcagttattatgggacgaagggagtat 32023313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8498247 - 8498199
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg 79  Q
    ||||||||| ||| |||||||||||| |||||| ||||||| |||||||    
T  8498247 aaaaataattaatattgtattgaaaagtgaaatggatcaatttttttgg 8498199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 10854788 - 10854697
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatattttttac--aaatgactcagttattatgggacgga 119  Q
    ||||||||| ||| |||||| ||||||| |||||| ||| ||||||| ||||| | ||||||    ||| ||||||||||||||||||||||    
T  10854788 aaaaataattaatattgtatcgaaaaataaaatagctcagatattttgggacatttttttttttgtaaaagactcagttattatgggacgga 10854697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 33994649 - 33994553
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||| | ||| |||||||||||| ||||||   |||  |||||||||||| | |||| | |||||| ||||||||||||  |||||||||||||    
T  33994649 aaaaatatttaatattgtattgaaaagtgaaatgactcagttatttttggacatttttttgtgcaaatggctcagttattatttgacggagggagta 33994553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 36097772 - 36097868
Alignment:
Q  32 aaaataataaatgttgtattgaaaaatgaaatagatca-atatttttggacaatat-tttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||| ||| ||| ||| |||||||| |||||| | ||| ||||||| ||||| | | ||||| |||||||||||||||||||| ||||||| |||||    
T  36097772 aaaaaaattaatattgcattgaaaagtgaaatggctcagatattttgggacactttgtttttgcaaatgactcagttattatgagacggagtgagta 36097868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 43640743 - 43640783
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| ||||| |||||||||||||||||| |||||||||    
T  43640743 ttttttgcaaataactcagttattatgggacagagggagta 43640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 50736114 - 50736003
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaata-ttttttacaaatgactcagtta 107  Q
    |||||||||||||  |||||||||  |||| |||||| ||||||||| ||||||   |||| |||| || || |||| |||||||||||| ||||| |||    
T  50736114 taattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaagatttatgcgataatatttttttacaaataactcaatta 50736015  T
Q  108 ttatgggacgga 119  Q
    ||| ||||||||    
T  50736014 ttacgggacgga 50736003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 50776741 - 50776852
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaata-ttttttacaaatgactcagtta 107  Q
    |||||||||||||  |||||||||  |||| |||||| ||||||||| ||||||   |||| |||| || || |||| |||||||||||| ||||| |||    
T  50776741 taattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaagatttatgcgataatatttttttacaaataactcaatta 50776840  T
Q  108 ttatgggacgga 119  Q
    ||| ||||||||    
T  50776841 ttacgggacgga 50776852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 51164884 - 51164844
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||| || ||||||||||||||||||||||||    
T  51164884 ttttttgcaaatggctgagttattatgggacggagggagta 51164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 53051039 - 53050940
Alignment:
Q  12 taattagagttatgattg--gaaaaataataaatgttgtattgaaaaatgaaatagatcaatattt-ttggacaata-ttttttacaaatgactcagtta 107  Q
    ||||||||||||| ||||  ||||| |||| ||| ||| |||||||| |||||| |||||| |||| | |||||||| |||||||||||||  |||||||    
T  53051039 taattagagttataattggagaaaagtaattaatattgcattgaaaagtgaaatggatcaagatttgtgggacaatatttttttacaaatgggtcagtta 53050940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 8083 - 8165
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| |||||||| ||||| ||||  |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8083 ttgtattgaaaagtgaaataggtcaattttttgagacaatattttttaacaattgactcagttattatgggacggagggagta 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 314427 - 314329
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta-caaatgactcagttattatgggacggagggagtat 127  Q
    ||||||||| ||| |||||||||||| |||||| ||||||| ||| | ||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  314427 aaaaataattaatattgtattgaaaagtgaaatggatcaatttttctaggacaatatttttttgcaaatgactcagttattatgggacggggggagtat 314329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 31348524 - 31348403
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta-caaatgactcagtta 107  Q
    ||||||| ||||| ||||||||||  |||| ||| |||||||||||| |||||| | ||||| ||| | ||||||||||||||  |||||| ||||||||    
T  31348524 taattagtgttataattggaaaaaagtaattaatattgtattgaaaattgaaatgggtcaatttttctaggacaatatttttttgcaaatggctcagtta 31348425  T
Q  108 ttatgggacggagggagtatat 129  Q
    ||||||||||||||||||||||    
T  31348424 ttatgggacggagggagtatat 31348403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 37529159 - 37529271
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttggacaatattttttacaaatgactca 103  Q
    ||||| ||||||||||||| |||| |||||  |||| ||| |||||||| ||| |||||| | ||||| |||| ||||||||||||||  |||| |||||    
T  37529159 taatattaattagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaattggtcaattttttaggacaatattttttgaaaataactca 37529258  T
Q  104 gttattatgggac 116  Q
    |||||||||||||    
T  37529259 gttattatgggac 37529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 13222060 - 13221965
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttattatgggacggagggagt 125  Q
    ||||||||| ||| |||||||||||| |||||| | ||||| ||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  13222060 aaaaataattaatattgtattgaaaagtgaaatgg-tcaatttttatgggacaatatttttttgcaaatgactcagttattatgggacggagggagt 13221965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 43182287 - 43182172
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactcagtta 107  Q
    |||||| |||||| |||| |||||  |||| |||||||||||||||| |||||| |||||| |||||| || ||||| |||||||| ||||| |||||||    
T  43182287 taattaaagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagatttttgggtcaatatttttttacgaatgattcagtta 43182188  T
Q  108 ttatgggacggaggga 123  Q
    ||||| ||||||||||    
T  43182187 ttatgagacggaggga 43182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 6075511 - 6075391
Alignment:
Q  12 taattagagttatgattggaaaaa----taataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttta-caaatgactcagt 105  Q
    ||||||||||||| ||||||||||    |||| | | ||||| |||||| |||||||||||||| ||||| ||||||||||||||  |||||  ||||||    
T  6075511 taattagagttataattggaaaaaaaaataattattattgtagtgaaaagtgaaatagatcaattttttttggacaatatttttttgcaaatagctcagt 6075412  T
Q  106 tattatgggacggagggagta 126  Q
    |||||||| ||||||||||||    
T  6075411 tattatggaacggagggagta 6075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 18181329 - 18181426
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaatattttt-tacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||| ||| |||||||||||| |||||| | ||| | ||||| ||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  18181329 aaaaataattaatattgtattgaaaagtgaaatgggtcagttattttaggacaatatttttctacaaaaagctcagttattatgggacggagggagta 18181426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 28844049 - 28843952
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatattttt-ggacaatatttttt-acaaatgactcagttattatgggacggagggagta 126  Q
    ||||| ||| |||||||||||||||| |||||| |||||| ||| || |||||||||||||| |||||||||||| |||||| |||| ||||| ||||    
T  28844049 aaaaaaaattaatgttgtattgaaaactgaaatggatcaaaattcttaggacaatatttttttacaaatgactcaattattacgggagggaggaagta 28843952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 9472404 - 9472317
Alignment:
Q  41 aatgttgtattgaaaaatgaaatagatcaatatttt-tggacaatatttttt-acaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||| |||||| | | |||||| | ||||||||||||||| |||||||||||||||||||||| ||| | ||||||    
T  9472404 aatgttgtattgaaaagtgaaatgggttaatattctctggacaatatttttttacaaatgactcagttattatggtacgaatggagta 9472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 18460507 - 18460393
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgact 101  Q
    ||||| ||||||||||||| ||||||||||  |||| ||||||||| ||||||  |||||   |||| ||| |||| ||||||||||||| |||||||||    
T  18460507 taatattaattagagttataattggaaaaaaataattaatgttgtagtgaaaagagaaattagtcaagattcttgggacaatattttttaacaaatgact 18460408  T
Q  102 cagttattatgggac 116  Q
    |||||||| ||||||    
T  18460407 cagttattttgggac 18460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 20696953 - 20696996
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtatat 129  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  20696953 ttttttgcaaatgactcagttattatgggacggagggagtatat 20696996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 24356124 - 24356006
Alignment:
Q  12 taattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt-acaaatgactcagtta 107  Q
    ||||||||||||| |||| |||||  |||| |||||||||||||||| |||||| | |||| ||| |||| |||||||||||| |||||||  |||||||    
T  24356124 taattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaagattcttgggacaatatttttttacaaatgggtcagtta 24356025  T
Q  108 ttatgggacggagggagta 126  Q
       ||||||||||||||||    
T  24356024 aactgggacggagggagta 24356006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 31592570 - 31592459
Alignment:
Q  5 ataatactaattagagttatgattggaaaaa-taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatt-ttttacaaatgact 101  Q
    |||||| |||||| |||||| |||||||||| |||| | | |||||||||||| ||||||   ||||| ||||||| |||||||| |||| |||||||||    
T  31592570 ataatattaattaaagttataattggaaaaagtaattattattgtattgaaaagtgaaatgagtcaatttttttgggacaatattattttgcaaatgact 31592471  T
Q  102 cagttattatgg 113  Q
    ||||||||||||    
T  31592470 cagttattatgg 31592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 6972659 - 6972756
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    |||| |||| ||| |||||||||||| |||||| ||| ||| ||| ||| ||||||||||||| |||||| ||| ||||||| |||||||||||||||    
T  6972659 aaaagtaattaatattgtattgaaaagtgaaatggataaatttttctgggacaatattttttagcaaatggctcggttattacgggacggagggagta 6972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25604385 - 25604247
Alignment:
Q  1 gtagataatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttgga-caatatttttta----- 92  Q
    |||||||||| |||||||| ||||  |||||||||  |||| ||||||| ||||||||| | ||||| ||||| |||||||| |||| ||||||          
T  25604385 gtagataatattaattagaattatagttggaaaaaagtaattaatgttggattgaaaaaggtaataggtcaatttttttggaacaatttttttttttttt 25604286  T
Q  93 ----caaatgactcagttattatgggacggagggagtat 127  Q
        ||||||||||||||||||| |||||||||||||||    
T  25604285 tttgcaaatgactcagttattataggacggagggagtat 25604247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 1908581 - 1908706
Alignment:
Q  5 ataatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatt-tttggacaata-ttttttacaaatgac 100  Q
    |||||| ||||||||||||| |||| |||||  |||| |||||||||||||||| |||||| |||||| |||  | | |||||| |||||||||||||      
T  1908581 ataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggatcaagattcctagaacaatatttttttacaaatggt 1908680  T
Q  101 tcagttattatgggacggagggagta 126  Q
    |||||||| |  | ||||||||||||    
T  1908681 tcagttatcacagaacggagggagta 1908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 7213412 - 7213370
Alignment:
Q  84 tattttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  7213412 tattttttgcaaatgactcacttattatgggacggagggagta 7213370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 40965071 - 40964947
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaat-atttttggacaata-ttttttacaaatgact 101  Q
    ||||| ||||||||||||| |  |||||||  |||| ||| |||||||||||||| |||||  ||| | ||||| ||||| |  |||||| |||||||||    
T  40965071 taatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaaat-aaataactcagttattttgggacatttcttttttgcaaatgact 40964973  T
Q  102 cagttattatgggacggagggagtat 127  Q
    ||||||||||||||| ||||||||||    
T  40964972 cagttattatgggactgagggagtat 40964947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 44260554 - 44260476
Alignment:
Q  43 tgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgactcagttattatgggacgga 119  Q
    |||||||||||||| ||||||  |||||  |||||| |||||||||||||  ||||||| |||||||||||||||||||    
T  44260554 tgttgtattgaaaagtgaaatgaatcaacttttttgagacaatatttttttgcaaatgattcagttattatgggacgga 44260476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 3123579 - 3123538
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  3123579 ttttttgcaattgactcagttattatgggacggagggagtat 3123538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 7649026 - 7649067
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtat 127  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  7649026 ttttttgcaaatgactcagttattatggaacggagggagtat 7649067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 38873017 - 38873133
Alignment:
Q  15 ttagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaa-tattttttacaaatgactcagttatta 110  Q
    |||||||||| || |||||||  |||| ||| ||||||| |||||||||||   ||||| |||||| ||||| | |||||| ||||||||| ||||||||    
T  38873017 ttagagttataatcggaaaaaagtaattaatattgtattaaaaaatgaaatgagtcaatttttttgagacaattcttttttgcaaatgacttagttatta 38873116  T
Q  111 tgggacggagggagtat 127  Q
    || |||||||| |||||    
T  38873117 tgtgacggaggaagtat 38873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 28108554 - 28108594
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  28108554 ttttttgcaaatggctcagttattatgggacggagggagta 28108594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 38282540 - 38282632
Alignment:
Q  31 aaaaataataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaatatttttt-acaaatgactcagttattatgggacggagg 121  Q
    ||||||||| ||||||||||| |||| ||| ||  ||||| ||| |||| |||||||||||| | |||||  |||||||||||||||||||||    
T  38282540 aaaaataattaatgttgtattaaaaagtgagatgaatcaagattcttgggacaatatttttttataaatggttcagttattatgggacggagg 38282632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 2427306 - 2427259
Alignment:
Q  73 tttttggacaatatttttta-caaatgactcagttattatgggacgga 119  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||    
T  2427306 ttttaggacaatatttttttgcaaatgactcagttattatgggacgga 2427259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 10394425 - 10394460
Alignment:
Q  94 aaatgactcagttattatgggacggagggagtatat 129  Q
    ||||| ||||||||||||||||||||||||||||||    
T  10394425 aaatggctcagttattatgggacggagggagtatat 10394460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 29938063 - 29938138
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatattttt-ggacaata-ttttttacaaatgactcagttattatgggacgg 118  Q
    ||||||| |||| |||||||||||||| ||||| ||| |||| |||||| ||||||||| ||||||||||| ||||    
T  29938063 ttgtattaaaaagtgaaatagatcaatttttttaggataatatttttttgcaaatgactaagttattatggaacgg 29938138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 30757724 - 30757779
Alignment:
Q  72 atttttggacaatatt-ttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||| | || |||| |||||| |||||||||||||||||||||||||||    
T  30757724 atttttggacacttttcttttgcaaatggctcagttattatgggacggagggagta 30757779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 3100334 - 3100292
Alignment:
Q  86 ttttttacaaatgactcagttattatgggacggagggagtata 128  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  3100334 ttttttgcaaatggctcagttattgtgggacggagggagtata 3100292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 4283150 - 4283232
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaatatttttggacaata-ttttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||| ||||||  |||||| |||| |||| ||| ||||||  ||||  |||| ||||||||||||||||||||||    
T  4283150 ttgtattgaaaattgaaatgaatcaattttttcggactatagttttttgaaaattgctcacttattatgggacggagggagta 4283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 5425801 - 5425752
Alignment:
Q  78 ggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||  |||||| |||| ||||||||||||||||||||||    
T  5425801 ggacaatatttttttgcaaatggctcacttattatgggacggagggagta 5425752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 6685832 - 6685881
Alignment:
Q  78 ggacaatatttttta-caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||||    
T  6685832 ggacaatatttttttgcaaatcactccgttattatgggacggagggagta 6685881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 40710501 - 40710468
Alignment:
Q  93 caaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||| ||||||||||||||||||||||    
T  40710501 caaatgactcatttattatgggacggagggagta 40710468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 28572139 - 28572103
Alignment:
Q  93 caaatgactcagttattatgggacggagggagtatat 129  Q
    |||||| |||||||||| |||||||||||||||||||    
T  28572139 caaatgtctcagttattgtgggacggagggagtatat 28572103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 158046 - 157922
Alignment:
Q  6 taatactaattagagttatgattggaaaaa--taataaatgttgtattgaaaaatgaaatagatcaatatttttg-gacaatatttttta-caaatgact 101  Q
    ||||| ||||||||||||| |||| |||||  |||| ||| |||||||||||| |||||| | ||||| |||||  |||||||||||||  |||||||||    
T  158046 taatattaattagagttataattgaaaaaaaataattaatattgtattgaaaagtgaaatgggtcaatttttttttgacaatatttttttgcaaatgact 157947  T
Q  102 cagttattatgggacggagggagta 126  Q
    |||||||||| ||||||||| ||||    
T  157946 cagttattataggacggaggaagta 157922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 230189 - 230151
Alignment:
Q  88 ttttacaaatgactcagttattatgggacggagggagta 126  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  230189 ttttacaaatgactcggttattatgggacggagggagta 230151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 353785 - 353832
Alignment:
Q  79 gacaatattttttacaaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  353785 gacaatattttttacaaatgactcggttattataggacggagggagta 353832  T

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Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 3285 - 3201
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||||||| ||||   ||||| ||||||| ||| | ||||||| |||||||| |||||||||||||| ||||||||||||    
T  3285 ttgtattgaaaaataaaatgtctcaattatttttgaacact-ttttttataaatgacttagttattatgggacagagggagtatat 3201  T

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Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 4457 - 4373
Alignment:
Q  45 ttgtattgaaaaatgaaatagatcaat-atttttggacaatattttttacaaatgactcagttattatgggacggagggagtatat 129  Q
    |||||||||||||| ||||   ||||| ||||||| ||| | ||||||| |||||||| |||||||||||||| ||||||||||||    
T  4457 ttgtattgaaaaataaaatgtctcaattatttttgaacact-ttttttataaatgacttagttattatgggacagagggagtatat 4373  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 394704 - 394672
Alignment:
Q  94 aaatgactcagttattatgggacggagggagta 126  Q
    |||||||||||||||||||||||||||||||||    
T  394704 aaatgactcagttattatgggacggagggagta 394672  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 97996 - 97962
Alignment:
Q  84 tattttttacaaatgactcagttattatgggacgg 118  Q
    |||||||| ||||||||||||||||||||||||||    
T  97996 tattttttgcaaatgactcagttattatgggacgg 97962  T

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Target: scaffold0685 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 6488 - 6609
Alignment:
Q  6 taatactaattagagttatgattggaaaaa---taataaatgttgtattgaaaaatgaaatagatcaatatttttgg-acaat--attttttacaaatga 99  Q
    ||||| ||||||||||||| |||| |||||   |||| |||||||||||||||| |||||| | |||| |||| ||| | |||   |||||||||||| |    
T  6488 taatattaattagagttataattgaaaaaaaagtaattaatgttgtattgaaaattgaaatgggtcaagatttctggaataattatttttttacaaataa 6587  T
Q  100 ctcagttattatgggacggagg 121  Q
    ||| ||||||||| || |||||    
T  6588 ctcggttattatgagatggagg 6609  T

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