View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13836_low_18 (Length: 332)

Name: NF13836_low_18
Description: NF13836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13836_low_18
NF13836_low_18
[»] chr1 (5 HSPs)
chr1 (19-324)||(45655393-45655705)
chr1 (96-144)||(37282500-37282548)
chr1 (95-144)||(15820612-15820660)
chr1 (96-140)||(1050333-1050377)
chr1 (111-143)||(52251645-52251677)
[»] chr8 (4 HSPs)
chr8 (96-194)||(11711807-11711904)
chr8 (27-126)||(4731994-4732094)
chr8 (96-144)||(32901991-32902039)
chr8 (90-126)||(41366414-41366450)
[»] chr2 (5 HSPs)
chr2 (96-143)||(28672179-28672226)
chr2 (33-126)||(723485-723579)
chr2 (106-140)||(28197215-28197249)
chr2 (87-144)||(15850881-15850937)
chr2 (28-126)||(11690823-11690923)
[»] chr5 (6 HSPs)
chr5 (27-126)||(534094-534195)
chr5 (24-144)||(13695424-13695545)
chr5 (96-136)||(30897728-30897768)
chr5 (91-137)||(8038525-8038572)
chr5 (111-144)||(16767652-16767685)
chr5 (111-143)||(34842433-34842465)
[»] chr3 (4 HSPs)
chr3 (83-140)||(7007345-7007402)
chr3 (96-144)||(27305521-27305569)
chr3 (90-126)||(22834803-22834839)
chr3 (27-125)||(32891426-32891526)
[»] chr4 (6 HSPs)
chr4 (27-126)||(5872151-5872251)
chr4 (96-144)||(21703695-21703743)
chr4 (91-143)||(5280593-5280645)
chr4 (99-139)||(20250673-20250712)
chr4 (27-67)||(46147127-46147167)
chr4 (90-126)||(52095158-52095194)
[»] chr6 (1 HSPs)
chr6 (108-137)||(6836550-6836579)
[»] chr7 (4 HSPs)
chr7 (83-143)||(3904262-3904322)
chr7 (97-137)||(27074127-27074167)
chr7 (97-137)||(27204146-27204186)
chr7 (96-144)||(30843288-30843336)


Alignment Details
Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 19 - 324
Target Start/End: Original strand, 45655393 - 45655705
Alignment:
Q  19 acttattgatatctcactttgaactcatgatacccatttaaccaattcatcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaatca 118  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  45655393 acttcttgatatcccactttaaactcatgatacccatttaaccaattcaccctgtgtcccatggtgggcatcaattgttgcgaattcggacttaaaatca 45655492  T
Q  119 caccaataaacttagatgtatggagcnnnnnnnnnn-gtagtaaccaatattaaaataacctcaagaaacaacaacataaccccatgaataagacacca- 216  Q
    || |||||||||||||||| ||||||           ||||||||||||||||||||||||| ||||||||||||||||| | |||||| |||||||||     
T  45655493 catcaataaacttagatgtgtggagcaaaaaaaaaaagtagtaaccaatattaaaataaccttaagaaacaacaacataatctcatgaacaagacaccac 45655592  T
Q  217 ----caccgcaccgcaccggtgtaagtattagagtctagctatattaatgtatggactctg-ttttttccaatacacaccgcaccgcacacatccaacaa 311  Q
        |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45655593 actgcaccacaccgcaccggtgtaagtattagagtctaagtatattaatgtatggactctgtttttttccaatacacaccgcaccgcacacatccaacaa 45655692  T
Q  312 tattcttcgacat 324  Q
    |||| || |||||    
T  45655693 tattattggacat 45655705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 37282500 - 37282548
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||    
T  37282500 ttgtgaattcggactcaaaatcacaccaataaacttaaatgtgtggagc 37282548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 15820660 - 15820612
Alignment:
Q  95 attgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||||||    
T  15820660 attgtgaattcggactcaaaa-ctcaccaataaacttagatgtgtggagc 15820612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 1050333 - 1050377
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatg 140  Q
    ||||||||| | ||| ||||||||||||||||||| |||||||||    
T  1050333 ttgtgaatttgaactcaaaatcacaccaataaactaagatgtatg 1050377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 52251677 - 52251645
Alignment:
Q  111 taaaatcacaccaataaacttagatgtatggag 143  Q
    |||||||| ||||||||||||||||||||||||    
T  52251677 taaaatcaaaccaataaacttagatgtatggag 52251645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 11711807 - 11711904
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagcnnnnnnnnnngtagtaaccaatattaaaataacctcaagaaacaacaaca 194  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||          ||||||||||| || ||| |||||||||||||||||||||    
T  11711807 ttgtgaattcggactcaaaattacaccaataaacttagatgtgtggagc-aaaaggaaagtagtaaccaagataaaagtaacctcaagaaacaacaaca 11711904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 4732094 - 4731994
Alignment:
Q  27 atatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaatcacaccaat 125  Q
    ||||| ||||||||||||||| ||| || | |||||||||| |||| || ||||  ||||||  ||||| ||||||||||| ||| ||||||||||||||    
T  4732094 atatcccactttgaactcatggtactcactgaaccaattcactcctatgccccacggtgggcgccaattgttgtgaattcgaactcaaaatcacaccaat 4731995  T
Q  126 a 126  Q
    |    
T  4731994 a 4731994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 32901991 - 32902039
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  32901991 ttgtgaattcggactcaaaatcagaccaataaacttagatgtgtggagc 32902039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 41366414 - 41366450
Alignment:
Q  90 caattattgtgaattcggacttaaaatcacaccaata 126  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41366414 caattattgtgaattcggactcaaaatcacaccaata 41366450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 28672226 - 28672179
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggag 143  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  28672226 ttgtgaattcgtactcaaaatcacaccaataaacttagatgtatggag 28672179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 723485 - 723579
Alignment:
Q  33 cactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaatcacaccaata 126  Q
    |||||||||| |||| ||| || | |||||||||| |||| |||||||  ||| || |||||| ||||||||||||||| |||||||||||||||    
T  723485 cactttgaacccatggtactcactaaaccaattcactcctatgtcccacggtgtgcgtcaattgttgtgaattcggactcaaaatcacaccaata 723579  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 28197249 - 28197215
Alignment:
Q  106 ggacttaaaatcacaccaataaacttagatgtatg 140  Q
    ||||||||||||||||||||||||||| |||||||    
T  28197249 ggacttaaaatcacaccaataaacttaaatgtatg 28197215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 15850937 - 15850881
Alignment:
Q  87 catcaattattgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    |||||||| |||||||||| |||| ||| ||||||||| |||||||||||| ||||||    
T  15850937 catcaattgttgtgaattcagactcaaa-tcacaccaaaaaacttagatgtgtggagc 15850881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 11690923 - 11690823
Alignment:
Q  28 tatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaa-tcacaccaat 125  Q
    |||| |||||||||| |||| ||| || | |||||||||| |||| || ||||  ||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  11690923 tatcccactttgaacccatggtactcactaaaccaattcactcctatgccccacggtgggcgccaattgttgtgaattcggactcaaaactcacaccaat 11690824  T
Q  126 a 126  Q
    |    
T  11690823 a 11690823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 534195 - 534094
Alignment:
Q  27 atatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaa-tcacaccaa 124  Q
    ||||| |||||||||| |||||||| || |||||||||||| |||| || ||||  ||||||  ||||| ||||||||||||||| |||| |||||||||    
T  534195 atatcccactttgaacccatgatactcacttaaccaattcactcctatgccccacggtgggcgccaattgttgtgaattcggactcaaaactcacaccaa 534096  T
Q  125 ta 126  Q
    ||    
T  534095 ta 534094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 13695424 - 13695545
Alignment:
Q  24 ttgatatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaatcacacc 122  Q
    ||||| || ||| |||||| |||||||| || |||||||||||| |||| || |||   ||||||  ||||| |||||||||||| || ||||||||||     
T  13695424 ttgatgtcccacattgaacccatgatactcacttaaccaattcactcctttgccccgcggtgggcgccaattgttgtgaattcggtctcaaaatcacaca 13695523  T
Q  123 aataaacttagatgtatggagc 144  Q
     ||||||||| |||||||||||    
T  13695524 cataaacttatatgtatggagc 13695545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 30897768 - 30897728
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatg 136  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30897768 ttgtgaattcgtacttaaaatcacaccaataaacttagatg 30897728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 8038572 - 8038525
Alignment:
Q  91 aattattgtgaattc-ggacttaaaatcacaccaataaacttagatgt 137  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  8038572 aattattgtgaatttaggactcaaaatcacaccaataaacttagatgt 8038525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 16767685 - 16767652
Alignment:
Q  111 taaaatcacaccaataaacttagatgtatggagc 144  Q
    ||||||||||||||||||||||||||| ||||||    
T  16767685 taaaatcacaccaataaacttagatgtgtggagc 16767652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 34842433 - 34842465
Alignment:
Q  111 taaaatcacaccaataaacttagatgtatggag 143  Q
    ||||||||||||||||||||||||||| |||||    
T  34842433 taaaatcacaccaataaacttagatgtgtggag 34842465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 7007345 - 7007402
Alignment:
Q  83 tgggcatcaattattgtgaattcggacttaaaatcacaccaataaacttagatgtatg 140  Q
    |||||||||||| ||||||||||| |  | ||||||||||||||||||||| ||||||    
T  7007345 tgggcatcaattgttgtgaattcgaaaatcaaatcacaccaataaacttaggtgtatg 7007402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 27305521 - 27305569
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    ||||||||||||||| |||||||||||||||||||  ||||| ||||||    
T  27305521 ttgtgaattcggactcaaaatcacaccaataaactatgatgtgtggagc 27305569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 22834803 - 22834839
Alignment:
Q  90 caattattgtgaattcggacttaaaatcacaccaata 126  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  22834803 caattgttgtgaattcggactcaaaatcacaccaata 22834839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 32891526 - 32891426
Alignment:
Q  27 atatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaa-tcacaccaa 124  Q
    |||||||||||||||| |||| ||| || |||||||||| | |||| || ||||  ||||||  ||||| |||||| |||||||| |||| |||||||||    
T  32891526 atatctcactttgaacccatggtactcacttaaccaatttactcctttgccccacggtgggcgccaattgttgtgacttcggactcaaaactcacaccaa 32891427  T
Q  125 t 125  Q
    |    
T  32891426 t 32891426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 5872251 - 5872151
Alignment:
Q  27 atatctcactttgaactcatgatacccatttaaccaattca-tcctgtgtcccatagtgggcatcaattattgtgaattcggacttaaaatcacaccaat 125  Q
    ||||| |||||||||| |||||||| || | |||||| ||| |||| || ||||  ||||||  ||||| |||||||| |||||| ||||||||||||||    
T  5872251 atatcccactttgaacccatgatactcactaaaccaaatcactcctatgccccacggtgggcgccaattgttgtgaatccggactcaaaatcacaccaat 5872152  T
Q  126 a 126  Q
    |    
T  5872151 a 5872151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 21703695 - 21703743
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    ||||||||||| ||| ||||||||| |||||||||||||||| ||||||    
T  21703695 ttgtgaattcgaactcaaaatcacagcaataaacttagatgtgtggagc 21703743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 5280593 - 5280645
Alignment:
Q  91 aattattgtgaattcggacttaaaatcacaccaataaacttagatgtatggag 143  Q
    ||||||||||||||||  || |||||||| |||||||| |||||||| |||||    
T  5280593 aattattgtgaattcgagctcaaaatcactccaataaatttagatgtgtggag 5280645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 20250712 - 20250673
Alignment:
Q  99 tgaattcggacttaaaatcacaccaataaacttagatgtat 139  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  20250712 tgaattcggacttaaa-tcacagcaataaacttagatgtat 20250673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 46147127 - 46147167
Alignment:
Q  27 atatctcactttgaactcatgatacccatttaaccaattca 67  Q
    |||||||||||||||| |||||||| || ||||||||||||    
T  46147127 atatctcactttgaacccatgatactcacttaaccaattca 46147167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 52095158 - 52095194
Alignment:
Q  90 caattattgtgaattcggacttaaaatcacaccaata 126  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  52095158 caattgttgtgaattcggactcaaaatcacaccaata 52095194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 137
Target Start/End: Original strand, 6836550 - 6836579
Alignment:
Q  108 acttaaaatcacaccaataaacttagatgt 137  Q
    ||||||||||||||||||||||||||||||    
T  6836550 acttaaaatcacaccaataaacttagatgt 6836579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 3904262 - 3904322
Alignment:
Q  83 tgggcatcaattattgtgaattcggacttaaaatcacaccaataaacttagatgtatggag 143  Q
    |||||| ||||||||||||||| | ||| ||||| ||||| ||||| |||||||| |||||    
T  3904262 tgggcaccaattattgtgaatttgaactcaaaatgacacctataaatttagatgtgtggag 3904322  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 27074167 - 27074127
Alignment:
Q  97 tgtgaattcggacttaaaatcacaccaataaacttagatgt 137  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  27074167 tgtgatttcggattcaaaatcacaccaataaacttagatgt 27074127  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 27204146 - 27204186
Alignment:
Q  97 tgtgaattcggacttaaaatcacaccaataaacttagatgt 137  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  27204146 tgtgatttcggattcaaaatcacaccaataaacttagatgt 27204186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 30843288 - 30843336
Alignment:
Q  96 ttgtgaattcggacttaaaatcacaccaataaacttagatgtatggagc 144  Q
    |||||||||| || | ||||||||||||||||||||||| || ||||||    
T  30843288 ttgtgaattcagaatcaaaatcacaccaataaacttagaagtgtggagc 30843336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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