View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13836_low_33 (Length: 239)
Name: NF13836_low_33
Description: NF13836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13836_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 18237039 - 18236818
Alignment:
| Q |
1 |
taatttggcatactatcatttgggttggtttggaatataataaaggagaaagttttcgaacatatgtcaaaagaggtggttaacatggttgataagatca |
100 |
Q |
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| T |
18237039 |
taatttggcatacgatcatttgggttggtttggaatacaataaaggagaaagttttcgaacataggtcaaaagaggtggttaacatggttgataagatca |
18236940 |
T |
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| Q |
101 |
acgagttgtcttggatatggcgtttatgtagattgatagtttccgcatgtctcttttacgagtgagatttgggagaatgcttcatgaggtagagattatt |
200 |
Q |
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| T |
18236939 |
acgagctgtcttggatatggcgtttaagtagattgatggtttccgcatgtctcttctacgagtgagattcgggagaatgcttcatgaggtagagattatt |
18236840 |
T |
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| Q |
201 |
tggtcgagtggagtgcctattt |
222 |
Q |
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| T |
18236839 |
tggtcgagtggagtgcctattt |
18236818 |
T |
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