View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13836_low_37 (Length: 221)
Name: NF13836_low_37
Description: NF13836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13836_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 37503137 - 37502936
Alignment:
| Q |
1 |
ccttcttgactcaaaatccacattttccatttgatgctcatggctccacttgattgttcacaatgatccacatggttctccttcgtccaccaaacaaatt |
100 |
Q |
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| T |
37503137 |
ccttcttgactcaaaatccacattttccatttgatggtcatggctccacttgattgctcacaatgatccacatggttctccttcgtccaccaaacaaatt |
37503038 |
T |
|
| Q |
101 |
tggaaaaaacaattctgttttaacacgcacaaaaccactcgaatcatttctgatgcaggcaccaatgccttctccattactagcatttgaaaatgaggca |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37503037 |
tggaaaaaacaattctgttttaacacgcacgaaaccactcgaatcatttctgatgcaggcaccaatgccttctccattactagcattggaaaatgaggca |
37502938 |
T |
|
| Q |
201 |
tt |
202 |
Q |
| |
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|| |
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|
| T |
37502937 |
tt |
37502936 |
T |
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