View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13838_high_19 (Length: 266)
Name: NF13838_high_19
Description: NF13838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13838_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 39300166 - 39300375
Alignment:
| Q |
10 |
aatatctccaatggcttttcctgcatgatctttgttcatttcaccaccttgtaatgcttcaatgctaccatgtggtggttccttgtctaccactgtaagt |
109 |
Q |
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| T |
39300166 |
aatatctccaatggcttttcctgcatgatctttgttcatttcaccaccttgtaatgcttcaatgctaccatgtggtggttccttgtctaccactgtaagt |
39300265 |
T |
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| Q |
110 |
tgttcaaaatgagttgtcatctttgggactctgtctttttcaacatgaatatctctctcgtttgtggtgttttctctgcgagacaattgttcagatgcca |
209 |
Q |
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| T |
39300266 |
tgttcaaaatgggtagtcatctttgggactctgtctttttcaacatgaatatctctctcgtttgtggtgttttctctgcgagacaattgttcagatgcca |
39300365 |
T |
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| Q |
210 |
ttttgtgtgt |
219 |
Q |
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|||||||||| |
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| T |
39300366 |
ttttgtgtgt |
39300375 |
T |
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