View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13839_high_10 (Length: 203)
Name: NF13839_high_10
Description: NF13839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13839_high_10 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 36275941 - 36276092
Alignment:
| Q |
19 |
aaaattagttttgtactgtttaatgtagtaagttagttgtgattagttgtagtacctttaccttaggagcattatataaagtgatcatacacttacctgt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36275941 |
aaaattagttttgtactgtttaatgtagtaagttagttgtgattagttgtagtacctttaccttaggagcattatataaagtgatcatacacttatctgt |
36276040 |
T |
|
| Q |
119 |
aatcaa---cttcattaaatcaattccaaaatcaatctttctatcatgtatc |
167 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
36276041 |
aatcaacttcttcattaaatcaattccaaaatcaatctttctatcatttatc |
36276092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University