View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13839_low_9 (Length: 246)
Name: NF13839_low_9
Description: NF13839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13839_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 34087740 - 34087952
Alignment:
| Q |
1 |
tgtcaaacactgaaactaatgattaacatgtgataatcttgatttagtctttaatcatgattagcgtgacatgctgctattgctaatccaaaactaaaaa |
100 |
Q |
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| T |
34087740 |
tgtcaaacactgaaactaatgattaacatgtgataatcttcatttagtctttaatcatgattagcgtgacatgct---attgctaatccaaaactaaaaa |
34087836 |
T |
|
| Q |
101 |
cttaacttggaaattgaagtgtgaagaaaacgcaatgatgtaaacatggtaatattaattagttaatctaataataatcctacggacaaaaataatgaat |
200 |
Q |
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| T |
34087837 |
cttaacttggaaattgaagtgtgaagaaaacgcaatgatgtaaacatggtaatattaa----ttaatctaataataatcctacggacaaaaataatgaat |
34087932 |
T |
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| Q |
201 |
gtacagcgtacgataagaag |
220 |
Q |
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|||||||||||||||||||| |
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| T |
34087933 |
gtacagcgtacgataagaag |
34087952 |
T |
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