View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1383_low_10 (Length: 493)

Name: NF1383_low_10
Description: NF1383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1383_low_10
NF1383_low_10
[»] chr3 (42 HSPs)
chr3 (1-116)||(6466029-6466145)
chr3 (302-361)||(54379268-54379327)
chr3 (302-359)||(6097585-6097642)
chr3 (302-359)||(9595881-9595938)
chr3 (302-359)||(30947812-30947869)
chr3 (302-359)||(50755170-50755227)
chr3 (302-357)||(3475308-3475363)
chr3 (302-357)||(19284781-19284836)
chr3 (302-359)||(2941827-2941884)
chr3 (302-359)||(9106375-9106432)
chr3 (302-359)||(19384390-19384447)
chr3 (302-359)||(26662439-26662496)
chr3 (302-357)||(10986462-10986517)
chr3 (302-359)||(26960734-26960791)
chr3 (302-359)||(51361532-51361589)
chr3 (302-359)||(33413913-33413971)
chr3 (302-352)||(46237659-46237709)
chr3 (316-360)||(31853163-31853207)
chr3 (314-359)||(47335140-47335185)
chr3 (302-341)||(8719133-8719172)
chr3 (302-341)||(9071020-9071059)
chr3 (277-336)||(30794834-30794892)
chr3 (301-339)||(23756295-23756333)
chr3 (302-336)||(34562408-34562442)
chr3 (302-334)||(19385334-19385366)
chr3 (302-334)||(51362457-51362489)
chr3 (302-334)||(52987669-52987701)
chr3 (302-337)||(8036809-8036844)
chr3 (302-337)||(16276678-16276713)
chr3 (302-337)||(36185905-36185940)
chr3 (302-337)||(50416489-50416524)
chr3 (302-337)||(50416564-50416599)
chr3 (301-339)||(23700100-23700138)
chr3 (301-339)||(23718555-23718593)
chr3 (301-339)||(23737011-23737049)
chr3 (302-336)||(47924367-47924401)
chr3 (304-334)||(50754022-50754052)
chr3 (302-335)||(8718115-8718148)
chr3 (302-335)||(9070002-9070035)
chr3 (302-335)||(27446215-27446248)
chr3 (302-334)||(16277433-16277465)
chr3 (269-305)||(50755206-50755242)
[»] chr7 (31 HSPs)
chr7 (302-361)||(48692026-48692085)
chr7 (302-359)||(41911013-41911070)
chr7 (302-359)||(46358628-46358685)
chr7 (302-359)||(47340255-47340312)
chr7 (302-357)||(35737058-35737113)
chr7 (302-359)||(763805-763862)
chr7 (302-359)||(16933144-16933201)
chr7 (302-359)||(16938527-16938584)
chr7 (302-359)||(30884123-30884180)
chr7 (302-359)||(31660177-31660234)
chr7 (302-359)||(46572583-46572640)
chr7 (302-359)||(15973869-15973926)
chr7 (302-359)||(32685853-32685910)
chr7 (302-342)||(34228614-34228654)
chr7 (316-360)||(48306330-48306373)
chr7 (302-336)||(11732051-11732085)
chr7 (301-334)||(28396735-28396768)
chr7 (302-335)||(48830601-48830634)
chr7 (302-334)||(15974955-15974987)
chr7 (302-334)||(30428887-30428919)
chr7 (302-337)||(26945714-26945749)
chr7 (302-337)||(38837729-38837764)
chr7 (302-337)||(44426607-44426642)
chr7 (302-337)||(46025060-46025095)
chr7 (301-339)||(5758308-5758346)
chr7 (277-306)||(45478527-45478556)
chr7 (302-335)||(46004537-46004570)
chr7 (302-334)||(12279759-12279791)
chr7 (299-339)||(32089953-32089992)
chr7 (277-305)||(34228607-34228635)
chr7 (302-334)||(48690909-48690941)
[»] chr2 (31 HSPs)
chr2 (302-361)||(7487155-7487214)
chr2 (302-359)||(39355143-39355200)
chr2 (302-359)||(1292080-1292137)
chr2 (302-359)||(8149939-8149996)
chr2 (302-359)||(8154563-8154620)
chr2 (302-359)||(18297177-18297234)
chr2 (304-359)||(34464819-34464874)
chr2 (302-359)||(15016467-15016524)
chr2 (302-359)||(25193969-25194026)
chr2 (316-358)||(18762946-18762988)
chr2 (301-339)||(43823873-43823911)
chr2 (324-360)||(4578590-4578626)
chr2 (302-335)||(41345096-41345129)
chr2 (302-334)||(18298130-18298162)
chr2 (302-334)||(25192906-25192938)
chr2 (302-337)||(15252848-15252883)
chr2 (302-337)||(31783802-31783837)
chr2 (302-337)||(34726613-34726648)
chr2 (301-336)||(36635763-36635798)
chr2 (302-336)||(20661405-20661439)
chr2 (318-359)||(2264632-2264673)
chr2 (326-359)||(9143693-9143726)
chr2 (326-359)||(14550465-14550498)
chr2 (277-306)||(15150304-15150333)
chr2 (302-335)||(19246671-19246704)
chr2 (302-335)||(24183599-24183632)
chr2 (302-335)||(37867357-37867390)
chr2 (302-334)||(20709788-20709820)
chr2 (305-337)||(22596316-22596348)
chr2 (301-341)||(25996085-25996125)
chr2 (277-305)||(42364494-42364522)
[»] scaffold0074 (1 HSPs)
scaffold0074 (302-359)||(24382-24439)
[»] chr8 (34 HSPs)
chr8 (302-359)||(1209764-1209821)
chr8 (302-359)||(4835527-4835584)
chr8 (302-359)||(39657717-39657774)
chr8 (302-361)||(1149924-1149983)
chr8 (304-359)||(4840974-4841029)
chr8 (302-359)||(34633222-34633279)
chr8 (305-361)||(41451211-41451267)
chr8 (302-357)||(15227140-15227195)
chr8 (302-357)||(30414024-30414079)
chr8 (301-359)||(19784379-19784437)
chr8 (302-359)||(2751213-2751270)
chr8 (302-359)||(10237462-10237519)
chr8 (313-359)||(41099290-41099336)
chr8 (302-358)||(7059144-7059200)
chr8 (303-341)||(15259865-15259903)
chr8 (305-339)||(1672769-1672803)
chr8 (302-336)||(35301638-35301672)
chr8 (326-359)||(7857788-7857821)
chr8 (302-339)||(23397441-23397478)
chr8 (302-334)||(1208723-1208755)
chr8 (269-305)||(2751249-2751285)
chr8 (302-334)||(32987464-32987496)
chr8 (302-334)||(39021989-39022021)
chr8 (323-359)||(43690748-43690784)
chr8 (302-337)||(1672931-1672966)
chr8 (302-337)||(17792892-17792927)
chr8 (302-337)||(27506715-27506750)
chr8 (302-337)||(28979291-28979326)
chr8 (302-337)||(35448610-35448645)
chr8 (302-333)||(42433715-42433746)
chr8 (301-335)||(10586063-10586097)
chr8 (302-336)||(34647180-34647214)
chr8 (302-334)||(7058128-7058160)
chr8 (277-305)||(15808887-15808915)
[»] chr6 (25 HSPs)
chr6 (302-359)||(6900911-6900968)
chr6 (302-359)||(15493282-15493339)
chr6 (302-361)||(34869964-34870023)
chr6 (302-359)||(7089190-7089247)
chr6 (302-359)||(878368-878425)
chr6 (302-359)||(1449650-1449707)
chr6 (302-359)||(31216770-31216827)
chr6 (313-361)||(33345356-33345403)
chr6 (313-352)||(35121503-35121542)
chr6 (319-359)||(1536814-1536854)
chr6 (301-341)||(18612358-18612398)
chr6 (302-336)||(15034992-15035026)
chr6 (302-335)||(7765406-7765439)
chr6 (302-339)||(30909437-30909474)
chr6 (302-334)||(12394399-12394431)
chr6 (302-334)||(33346390-33346422)
chr6 (302-336)||(19284380-19284414)
chr6 (302-336)||(21384990-21385024)
chr6 (301-335)||(29163719-29163753)
chr6 (302-339)||(4101974-4102011)
chr6 (302-335)||(10588955-10588988)
chr6 (302-335)||(22857497-22857530)
chr6 (268-305)||(22857691-22857728)
chr6 (301-334)||(29157239-29157272)
chr6 (277-305)||(1449686-1449714)
[»] chr5 (29 HSPs)
chr5 (302-359)||(14394576-14394633)
chr5 (302-359)||(14940257-14940314)
chr5 (302-359)||(26637738-26637795)
chr5 (302-361)||(3883936-3883995)
chr5 (301-358)||(15416773-15416830)
chr5 (302-359)||(37456788-37456845)
chr5 (301-359)||(30783566-30783623)
chr5 (302-360)||(13553090-13553148)
chr5 (305-358)||(28069259-28069312)
chr5 (301-339)||(16667666-16667704)
chr5 (312-357)||(34330166-34330211)
chr5 (302-339)||(13363792-13363829)
chr5 (302-334)||(13362784-13362816)
chr5 (302-334)||(25017236-25017268)
chr5 (302-334)||(28070172-28070204)
chr5 (302-337)||(11660982-11661017)
chr5 (302-337)||(22695540-22695575)
chr5 (302-337)||(39861780-39861815)
chr5 (303-337)||(39861589-39861623)
chr5 (302-335)||(3340599-3340632)
chr5 (302-335)||(15559058-15559091)
chr5 (302-335)||(23155534-23155567)
chr5 (302-339)||(23334720-23334756)
chr5 (274-306)||(703729-703761)
chr5 (302-334)||(23335726-23335758)
chr5 (277-305)||(23948595-23948623)
chr5 (302-334)||(34329141-34329173)
chr5 (277-305)||(39086519-39086547)
chr5 (277-305)||(39166354-39166382)
[»] chr4 (56 HSPs)
chr4 (302-359)||(638972-639029)
chr4 (302-359)||(11786082-11786139)
chr4 (302-359)||(11798249-11798306)
chr4 (302-359)||(13635626-13635683)
chr4 (302-359)||(30597807-30597864)
chr4 (302-359)||(45256873-45256930)
chr4 (302-359)||(49425958-49426015)
chr4 (302-359)||(51921166-51921223)
chr4 (302-358)||(49492413-49492469)
chr4 (304-359)||(35291451-35291506)
chr4 (302-359)||(15051037-15051094)
chr4 (302-355)||(50644652-50644705)
chr4 (305-359)||(27865641-27865695)
chr4 (302-359)||(10473626-10473683)
chr4 (302-359)||(26577270-26577327)
chr4 (302-359)||(53441428-53441485)
chr4 (302-359)||(46672546-46672603)
chr4 (302-359)||(51836336-51836393)
chr4 (301-339)||(48076920-48076958)
chr4 (302-339)||(22180215-22180252)
chr4 (302-339)||(30358835-30358872)
chr4 (323-359)||(1621984-1622020)
chr4 (315-359)||(36011951-36011995)
chr4 (313-352)||(55765596-55765635)
chr4 (301-339)||(50562678-50562716)
chr4 (301-334)||(48077864-48077897)
chr4 (302-334)||(22181264-22181296)
chr4 (302-334)||(26447431-26447463)
chr4 (302-334)||(27764254-27764286)
chr4 (302-334)||(36621720-36621752)
chr4 (302-334)||(45255989-45256021)
chr4 (302-334)||(50643757-50643789)
chr4 (302-337)||(8165771-8165806)
chr4 (302-337)||(17109918-17109953)
chr4 (302-337)||(21995679-21995714)
chr4 (302-337)||(25715652-25715687)
chr4 (302-337)||(30779352-30779387)
chr4 (302-337)||(36309425-36309460)
chr4 (302-337)||(36924250-36924285)
chr4 (302-337)||(37059720-37059755)
chr4 (302-337)||(53865243-53865278)
chr4 (302-337)||(54895583-54895618)
chr4 (302-336)||(1492681-1492715)
chr4 (302-336)||(8157290-8157324)
chr4 (302-336)||(33819700-33819734)
chr4 (302-336)||(51076906-51076940)
chr4 (302-335)||(2124353-2124386)
chr4 (302-335)||(6841830-6841863)
chr4 (304-333)||(29826626-29826655)
chr4 (302-335)||(31763110-31763143)
chr4 (326-359)||(38245896-38245929)
chr4 (302-334)||(21097154-21097186)
chr4 (277-305)||(25715741-25715769)
chr4 (277-305)||(36309631-36309659)
chr4 (277-305)||(53526253-53526281)
chr4 (277-305)||(54895406-54895434)
[»] chr1 (41 HSPs)
chr1 (302-359)||(23817418-23817475)
chr1 (302-359)||(24636034-24636091)
chr1 (302-359)||(48762232-48762289)
chr1 (302-359)||(49936838-49936895)
chr1 (302-361)||(19897661-19897720)
chr1 (302-359)||(16976063-16976120)
chr1 (302-359)||(21641603-21641660)
chr1 (302-359)||(43452650-43452707)
chr1 (302-359)||(11422548-11422605)
chr1 (302-359)||(18618943-18618999)
chr1 (302-359)||(20434623-20434680)
chr1 (302-359)||(23174411-23174468)
chr1 (302-359)||(23920980-23921037)
chr1 (302-357)||(6314226-6314281)
chr1 (305-358)||(180832-180885)
chr1 (302-359)||(4097119-4097175)
chr1 (302-359)||(25888930-25888986)
chr1 (314-359)||(50351911-50351956)
chr1 (317-361)||(34370493-34370537)
chr1 (314-361)||(8401423-8401470)
chr1 (305-339)||(18057807-18057841)
chr1 (301-334)||(16115864-16115897)
chr1 (302-339)||(21255849-21255886)
chr1 (302-334)||(18056798-18056830)
chr1 (302-337)||(9628599-9628634)
chr1 (302-337)||(14389853-14389888)
chr1 (302-337)||(17893081-17893116)
chr1 (302-337)||(18928787-18928822)
chr1 (302-337)||(33157001-33157036)
chr1 (302-337)||(42134133-42134168)
chr1 (302-337)||(45849117-45849152)
chr1 (302-335)||(1395353-1395386)
chr1 (302-335)||(10974642-10974675)
chr1 (302-335)||(14229181-14229214)
chr1 (302-335)||(17893275-17893308)
chr1 (302-335)||(31084404-31084437)
chr1 (270-306)||(11422583-11422619)
chr1 (302-334)||(22348053-22348085)
chr1 (270-306)||(23920966-23921002)
chr1 (277-305)||(24368626-24368654)
chr1 (269-305)||(45890607-45890643)
[»] scaffold0571 (1 HSPs)
scaffold0571 (302-359)||(554-611)
[»] scaffold0338 (1 HSPs)
scaffold0338 (302-359)||(6491-6548)
[»] scaffold0045 (1 HSPs)
scaffold0045 (302-359)||(33792-33849)
[»] scaffold0581 (1 HSPs)
scaffold0581 (313-359)||(8333-8379)
[»] scaffold0238 (1 HSPs)
scaffold0238 (302-334)||(25251-25283)
[»] scaffold0516 (1 HSPs)
scaffold0516 (302-337)||(1248-1283)
[»] scaffold0249 (2 HSPs)
scaffold0249 (302-337)||(23553-23588)
scaffold0249 (302-336)||(23736-23770)
[»] scaffold0009 (2 HSPs)
scaffold0009 (302-337)||(51914-51949)
scaffold0009 (302-339)||(202921-202958)
[»] scaffold0004 (1 HSPs)
scaffold0004 (274-305)||(95998-96029)
[»] scaffold0102 (1 HSPs)
scaffold0102 (302-336)||(33625-33659)
[»] scaffold0194 (1 HSPs)
scaffold0194 (302-339)||(28673-28710)
[»] scaffold0129 (1 HSPs)
scaffold0129 (302-335)||(20122-20155)
[»] scaffold0544 (1 HSPs)
scaffold0544 (302-334)||(10694-10726)
[»] scaffold0097 (1 HSPs)
scaffold0097 (302-334)||(13627-13659)
[»] scaffold0050 (1 HSPs)
scaffold0050 (277-305)||(20979-21007)
[»] scaffold0031 (1 HSPs)
scaffold0031 (277-305)||(80881-80909)


Alignment Details
Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6466145 - 6466029
Alignment:
Q  1 catatagttatctcaccactgcacaaggatgtgtatctcatttcattgagttagggaattaaaaatctaaagatttaaggtttgaatgttgataatggag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  6466145 catatagttatctcaccactgcacaaggatgtgtatctcatttcattgagttaggaaattaaaaatctaaagatttaaggtttgaatgttgataaaggag 6466046  T
Q  101 aaaaatac-taatataa 116  Q
    || ||||| ||||||||    
T  6466045 aataatacataatataa 6466029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 54379327 - 54379268
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54379327 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 54379268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 6097585 - 6097642
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6097585 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 6097642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 9595881 - 9595938
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9595881 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 9595938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 30947812 - 30947869
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30947812 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 30947869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 50755227 - 50755170
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50755227 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 50755170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 357
Target Start/End: Original strand, 3475308 - 3475363
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3475308 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 3475363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 19284836 - 19284781
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19284836 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 19284781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 2941827 - 2941884
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2941827 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacacc 2941884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 9106432 - 9106375
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9106432 tgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacc 9106375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 19384390 - 19384447
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19384390 tgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacc 19384447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 26662439 - 26662496
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26662439 tgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacc 26662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 10986517 - 10986462
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10986517 tgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctaca 10986462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 26960791 - 26960734
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26960791 tgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacacc 26960734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 51361532 - 51361589
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51361532 tgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacacc 51361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 33413913 - 33413971
Alignment:
Q  302 tgcataaggaaatcc-ttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  33413913 tgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacacc 33413971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 46237659 - 46237709
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttc 352  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46237659 tgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttc 46237709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 31853207 - 31853163
Alignment:
Q  316 cttatgcaccgtgcataaatcccaacataattgcttcctacacct 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacacct 31853163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 47335185 - 47335140
Alignment:
Q  314 tccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  47335185 tccttatgcaccgtgcataaatcccaacataattgtttcctacacc 47335140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 341
Target Start/End: Complemental strand, 8719172 - 8719133
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8719172 tgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 341
Target Start/End: Complemental strand, 9071059 - 9071020
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaac 341  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9071059 tgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 30794834 - 30794892
Alignment:
Q  277 gttatggtgcataagaaaatccttatgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||    
T  30794834 gttatggtgcataaggaaatcctg-tgcataaggaaatccttatgcaccctgcataaatc 30794892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 23756333 - 23756295
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  23756333 atgcataaggaaatccttatgcaccgtggataaatccca 23756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 34562408 - 34562442
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||||||||||||||    
T  34562408 tgcataaggaaatccttatgcaccgtgcataaatc 34562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 19385366 - 19385334
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  19385366 tgcataaggaaatccttatgcaccgtgcataaa 19385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 51362489 - 51362457
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  51362489 tgcataaggaaatccttatgcaccgtgcataaa 51362457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 52987701 - 52987669
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  52987701 tgcataaggaaatccttatgcaccgtgcataaa 52987669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 8036809 - 8036844
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  8036809 tgcataaggaaatccttatgcaccctgcataaatcc 8036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 16276678 - 16276713
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16276678 tgcataaagaaatccttatgcaccgtgcataaatcc 16276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 36185940 - 36185905
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  36185940 tgcataaggaaatccttatgcaccctgcataaatcc 36185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 50416489 - 50416524
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  50416489 tgcataaggaaatccttatgcaccctgcataaatcc 50416524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 50416599 - 50416564
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  50416599 tgcataaggaaatccttatgcaccctgcataaatcc 50416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 23700138 - 23700100
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  23700138 atgcataaggaaatccttatgcatcgtggataaatccca 23700100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 23718593 - 23718555
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  23718593 atgcataaggaaatccttatgcatcgtggataaatccca 23718555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 23737049 - 23737011
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  23737049 atgcataaggaaatccttatgcatcgtggataaatccca 23737011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 47924401 - 47924367
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  47924401 tgcataaggaaatccttatgcaccctgcataaatc 47924367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 334
Target Start/End: Original strand, 50754022 - 50754052
Alignment:
Q  304 cataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||    
T  50754022 cataaggaaatccttatgcaccgtgcataaa 50754052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 8718115 - 8718148
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||||| |||||||    
T  8718115 tgcataaggaaatccttatgcaccgtacataaat 8718148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 9070002 - 9070035
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||||| |||||||    
T  9070002 tgcataaggaaatccttatgcaccgtacataaat 9070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 27446248 - 27446215
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  27446248 tgcataaggaaatccttatgcaccttgcataaat 27446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 16277465 - 16277433
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||| ||||||||||||||||||    
T  16277465 tgcataaggaaatctttatgcaccgtgcataaa 16277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 50755242 - 50755206
Alignment:
Q  269 agggagcagttatggtgcataagaaaatccttatgca 305  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  50755242 agggatcagttatggtgcataaggaaatccttatgca 50755206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 48692085 - 48692026
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48692085 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 48692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 41911013 - 41911070
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41911013 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 41911070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 46358685 - 46358628
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46358685 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 46358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 47340312 - 47340255
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47340312 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 47340255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 35737113 - 35737058
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35737113 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 35737058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 763862 - 763805
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  763862 tgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacc 763805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 16933144 - 16933201
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16933144 tgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacc 16933201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 16938527 - 16938584
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16938527 tgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacc 16938584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 30884123 - 30884180
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30884123 tgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacc 30884180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 31660234 - 31660177
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31660234 tgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacc 31660177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 46572583 - 46572640
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46572583 tgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 46572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 15973869 - 15973926
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15973869 tgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacacc 15973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 32685853 - 32685910
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  32685853 tgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacacc 32685910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 34228614 - 34228654
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaaca 342  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  34228614 tgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 360
Target Start/End: Complemental strand, 48306373 - 48306330
Alignment:
Q  316 cttatgcaccgtgcataaatcccaacataattgcttcctacacct 360  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  48306373 cttatgcaccgtgcataaatcccaacataatt-cttcctacacct 48306330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 11732051 - 11732085
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||||||||||||||    
T  11732051 tgcataaggaaatccttatgcaccgtgcataaatc 11732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 28396735 - 28396768
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||||||||||||||||||    
T  28396735 atgcataaggaaatccttatgcaccgtgcataaa 28396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 48830634 - 48830601
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    ||||||||||||||||||||||||||||||||||    
T  48830634 tgcataaggaaatccttatgcaccgtgcataaat 48830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 15974987 - 15974955
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  15974987 tgcataaggaaatccttatgcaccgtgcataaa 15974955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 30428887 - 30428919
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  30428887 tgcataaggaaatccttatgcaccgtgcataaa 30428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 26945749 - 26945714
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  26945749 tgcataaggaaatccttatgcaccctgcataaatcc 26945714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 38837764 - 38837729
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  38837764 tgcataaggaaatccttatgcaccttgcataaatcc 38837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 44426607 - 44426642
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  44426607 tgcataaggaaatccttatgcaccctgcataaatcc 44426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 46025095 - 46025060
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    ||||||||||||||| ||||||||||||||||||||    
T  46025095 tgcataaggaaatccctatgcaccgtgcataaatcc 46025060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 5758346 - 5758308
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  5758346 atgcataaggaaatccttatgcatcgtggataaatccca 5758308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 45478556 - 45478527
Alignment:
Q  277 gttatggtgcataagaaaatccttatgcat 306  Q
    ||||||||||||||||||||||||||||||    
T  45478556 gttatggtgcataagaaaatccttatgcat 45478527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 46004570 - 46004537
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  46004570 tgcataaggaaatccttatgcaccctgcataaat 46004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 12279759 - 12279791
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||| ||||||||||||||||||    
T  12279759 tgcataaggaaatctttatgcaccgtgcataaa 12279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 32089953 - 32089992
Alignment:
Q  299 ttatgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  32089953 ttatgcataaggaa-tccttatgcaccctgcataaatccca 32089992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 34228607 - 34228635
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  34228607 gttatggtgcataagaaaatccttatgca 34228635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 48690909 - 48690941
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||| |||||||||||||||||||||||||    
T  48690909 tgcataaagaaatccttatgcaccgtgcataaa 48690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 7487155 - 7487214
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7487155 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 7487214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 39355200 - 39355143
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39355200 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 39355143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 1292080 - 1292137
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1292080 tgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacc 1292137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 8149996 - 8149939
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8149996 tgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 8149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 8154620 - 8154563
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8154620 tgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 8154563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 18297177 - 18297234
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18297177 tgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 18297234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 34464874 - 34464819
Alignment:
Q  304 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34464874 cataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacacc 34464819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 15016467 - 15016524
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  15016467 tgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacacc 15016524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 25194026 - 25193969
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  25194026 tgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacacc 25193969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 18762988 - 18762946
Alignment:
Q  316 cttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacac 18762946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 43823911 - 43823873
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43823911 atgcataaggaaatccttatgcaccgtgcataaatccca 43823873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 4578590 - 4578626
Alignment:
Q  324 ccgtgcataaatcccaacataattgcttcctacacct 360  Q
    |||||||||||||||||||||||||||||||||||||    
T  4578590 ccgtgcataaatcccaacataattgcttcctacacct 4578626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 41345096 - 41345129
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    ||||||||||||||||||||||||||||||||||    
T  41345096 tgcataaggaaatccttatgcaccgtgcataaat 41345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 18298162 - 18298130
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  18298162 tgcataaggaaatccttatgcaccgtgcataaa 18298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 25192906 - 25192938
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  25192906 tgcataaggaaatccttatgcaccgtgcataaa 25192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 15252848 - 15252883
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  15252848 tgcataaggaaatccttatgcaccctgcataaatcc 15252883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 31783802 - 31783837
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  31783802 tgcataaggaaatccttatgcaccctgcataaatcc 31783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 34726613 - 34726648
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  34726613 tgcataaggaaatccttatgcaccctgcataaatcc 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 336
Target Start/End: Original strand, 36635763 - 36635798
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||| |||||||||||||||||||||||||||    
T  36635763 atgcataaagaaatccttatgcaccgtgcataaatc 36635798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 20661405 - 20661439
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  20661405 tgcataaggaaatccttatgcaccctgcataaatc 20661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 2264673 - 2264632
Alignment:
Q  318 tatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||| || ||||||| |||||||||||||||||||||||    
T  2264673 tatgcacagtacataaattccaacataattgcttcctacacc 2264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 9143726 - 9143693
Alignment:
Q  326 gtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||| |||||||||||||||||||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacc 9143693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 14550465 - 14550498
Alignment:
Q  326 gtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||| ||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacacc 14550498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 15150333 - 15150304
Alignment:
Q  277 gttatggtgcataagaaaatccttatgcat 306  Q
    ||||||||||||||||||||||||||||||    
T  15150333 gttatggtgcataagaaaatccttatgcat 15150304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 19246671 - 19246704
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  19246671 tgcataaggaaatccttatgcaccctgcataaat 19246704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 24183632 - 24183599
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  24183632 tgcataaggaaatccttatgcaccctgcataaat 24183599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 37867390 - 37867357
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  37867390 tgcataaggaaatccttatgcaccctgcataaat 37867357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 20709788 - 20709820
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||| |||||||||||||    
T  20709788 tgcataaggaaatccttatccaccgtgcataaa 20709820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 22596316 - 22596348
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatcc 337  Q
    ||||||||||||||||||||| |||||||||||    
T  22596316 ataaggaaatccttatgcaccctgcataaatcc 22596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 25996125 - 25996085
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatcccaac 341  Q
    |||||||||||||| |||| ||||||||||||||| |||||    
T  25996125 atgcataaggaaattcttaagcaccgtgcataaattccaac 25996085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 42364494 - 42364522
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  42364494 gttatggtgcataagaaaatccttatgca 42364522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 24439 - 24382
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24439 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 24382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 1209821 - 1209764
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1209821 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 1209764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 4835527 - 4835584
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4835527 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 4835584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 39657717 - 39657774
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39657717 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 39657774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 1149924 - 1149983
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1149924 tgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacctc 1149983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 4840974 - 4841029
Alignment:
Q  304 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 4841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 34633222 - 34633279
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34633222 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacacc 34633279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 41451267 - 41451211
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41451267 ataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacctc 41451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 15227195 - 15227140
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15227195 tgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctaca 15227140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 30414079 - 30414024
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30414079 tgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctaca 30414024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 19784437 - 19784379
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  19784437 atgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacacc 19784379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 2751270 - 2751213
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2751270 tgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacc 2751213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 10237519 - 10237462
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  10237519 tgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacacc 10237462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 41099336 - 41099290
Alignment:
Q  313 atccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41099336 atccttatgcaccgtgcataaatcccaacataattgcttcctacacc 41099290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 7059200 - 7059144
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  7059200 tgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 15259865 - 15259903
Alignment:
Q  303 gcataaggaaatccttatgcaccgtgcataaatcccaac 341  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15259865 gcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 1672803 - 1672769
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||||||||||    
T  1672803 ataaggaaatccttatgcaccgtgcataaatccca 1672769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 35301638 - 35301672
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||||||||||||||    
T  35301638 tgcataaggaaatccttatgcaccgtgcataaatc 35301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 7857821 - 7857788
Alignment:
Q  326 gtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacc 7857788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 23397478 - 23397441
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23397478 tgcataaggaaatccttatgcaccatgcataaatccca 23397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 1208723 - 1208755
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  1208723 tgcataaggaaatccttatgcaccgtgcataaa 1208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 2751285 - 2751249
Alignment:
Q  269 agggagcagttatggtgcataagaaaatccttatgca 305  Q
    ||||||| |||||||||||||||||||||||||||||    
T  2751285 agggagcggttatggtgcataagaaaatccttatgca 2751249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 32987496 - 32987464
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  32987496 tgcataaggaaatccttatgcaccgtgcataaa 32987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 39021989 - 39022021
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  39021989 tgcataaggaaatccttatgcaccgtgcataaa 39022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 43690784 - 43690748
Alignment:
Q  323 accgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||| |||||||    
T  43690784 accgtgcataaatcccaacataattgctttctacacc 43690748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 1672966 - 1672931
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  1672966 tgcataaggaaatccttatgcaccctgcataaatcc 1672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 17792927 - 17792892
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  17792927 tgcataaggaaatccttatgcaccctgcataaatcc 17792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 27506715 - 27506750
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  27506715 tgcataaggaaatccttatgcaccctgcataaatcc 27506750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 28979291 - 28979326
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  28979291 tgcataaggaaatccttatgcaccctgcataaatcc 28979326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 35448645 - 35448610
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  35448645 tgcataaggaaatccttatgcaccctgcataaatcc 35448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 333
Target Start/End: Original strand, 42433715 - 42433746
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataa 333  Q
    ||||||||||||||||||||||||||||||||    
T  42433715 tgcataaggaaatccttatgcaccgtgcataa 42433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 10586097 - 10586063
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaat 335  Q
    ||||||||||||||||||||||||| |||||||||    
T  10586097 atgcataaggaaatccttatgcaccctgcataaat 10586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 34647180 - 34647214
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    ||||||||||||||||||||||||||| |||||||    
T  34647180 tgcataaggaaatccttatgcaccgtgtataaatc 34647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 7058128 - 7058160
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||| |||||||||||||||||||    
T  7058128 tgcataaggaaatacttatgcaccgtgcataaa 7058160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 15808887 - 15808915
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  15808887 gttatggtgcataagaaaatccttatgca 15808915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 6900968 - 6900911
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6900968 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 6900911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 15493339 - 15493282
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15493339 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 15493282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 34869964 - 34870023
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34869964 tgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacctc 34870023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 7089247 - 7089190
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7089247 tgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacacc 7089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 878425 - 878368
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  878425 tgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacacc 878368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 1449707 - 1449650
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1449707 tgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacc 1449650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 31216827 - 31216770
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||| |||||| |||||| |||||| |||||||||||||||||||||||    
T  31216827 tgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacacc 31216770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 33345356 - 33345403
Alignment:
Q  313 atccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33345356 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacctc 33345403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 35121542 - 35121503
Alignment:
Q  313 atccttatgcaccgtgcataaatcccaacataattgcttc 352  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35121542 atccttatgcaccgtgcataaatcccaacataattgcttc 35121503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 1536814 - 1536854
Alignment:
Q  319 atgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  1536814 atgcaccgtgcataaatcccaatataattgcttcctacacc 1536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 18612398 - 18612358
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatcccaac 341  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  18612398 atgcataaggaaatccttatgcaccgtacataaatcccaac 18612358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 15035026 - 15034992
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||||||||||||||    
T  15035026 tgcataaggaaatccttatgcaccgtgcataaatc 15034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 7765439 - 7765406
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    ||||||||||||||||||||||||||||||||||    
T  7765439 tgcataaggaaatccttatgcaccgtgcataaat 7765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 30909474 - 30909437
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30909474 tgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 12394431 - 12394399
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  12394431 tgcataaggaaatccttatgcaccgtgcataaa 12394399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 33346422 - 33346390
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  33346422 tgcataaggaaatccttatgcaccgtgcataaa 33346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 19284380 - 19284414
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  19284380 tgcataaggaaatccttatgcaccctgcataaatc 19284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 21385024 - 21384990
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  21385024 tgcataaggaaatccttatgcaccctgcataaatc 21384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 29163753 - 29163719
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||| ||||||||||||||||||||    
T  29163753 atgcataaggaaattcttatgcaccgtgcataaat 29163719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 4101974 - 4102011
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||  |||||||||||||||||||||||    
T  4101974 tgcataaggaaatgtttatgcaccgtgcataaatccca 4102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 10588988 - 10588955
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  10588988 tgcataaggaaatccttatgcaccctgcataaat 10588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 22857497 - 22857530
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  22857497 tgcataaggaaatccttatgcaccctgcataaat 22857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 22857728 - 22857691
Alignment:
Q  268 gagggagcagttatggtgcataagaaaatccttatgca 305  Q
    ||||| || |||||||||||||||||||||||||||||    
T  22857728 gagggtgcggttatggtgcataagaaaatccttatgca 22857691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 29157239 - 29157272
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||| ||||||||||||||||||||||||||||    
T  29157239 atgcacaaggaaatccttatgcaccgtgcataaa 29157272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 1449714 - 1449686
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  1449714 gttatggtgcataagaaaatccttatgca 1449686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 14394633 - 14394576
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14394633 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 14394576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 14940257 - 14940314
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14940257 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 14940314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 26637738 - 26637795
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26637738 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 26637795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 3883936 - 3883995
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3883936 tgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacctc 3883995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 15416830 - 15416773
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15416830 atgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacac 15416773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 37456845 - 37456788
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37456845 tgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 37456788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 30783623 - 30783566
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30783623 atgcataaggaaatccttatgcaccgtgcataaat-ccaacataattgcttcctacacc 30783566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 13553148 - 13553090
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacct 360  Q
    ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  13553148 tgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacacct 13553090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 358
Target Start/End: Original strand, 28069259 - 28069312
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  28069259 ataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacac 28069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 16667666 - 16667704
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16667666 atgcataaggaaatccttatgcaccgtgcataaatccca 16667704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 34330211 - 34330166
Alignment:
Q  312 aatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  34330211 aatccttatgcaccgtgcataaattccaacataattgcttcataca 34330166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 13363829 - 13363792
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13363829 tgcacaaggaaatccttatgcaccgtgcataaatccca 13363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 13362784 - 13362816
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  13362784 tgcataaggaaatccttatgcaccgtgcataaa 13362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 25017268 - 25017236
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  25017268 tgcataaggaaatccttatgcaccgtgcataaa 25017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 28070204 - 28070172
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  28070204 tgcataaggaaatccttatgcaccgtgcataaa 28070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 11661017 - 11660982
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  11661017 tgcataaggaaatccttatgcaccctgcataaatcc 11660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 22695575 - 22695540
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  22695575 tgcataaggaaatccttatgcaccttgcataaatcc 22695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 39861815 - 39861780
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  39861815 tgcataaggaaatccttatgcaccctgcataaatcc 39861780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 39861589 - 39861623
Alignment:
Q  303 gcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    ||||||||||||||||||||||| |||||||||||    
T  39861589 gcataaggaaatccttatgcaccctgcataaatcc 39861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 3340599 - 3340632
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  3340599 tgcataaggaaatccttatgcaccctgcataaat 3340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 15559058 - 15559091
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  15559058 tgcataaggaaatccttatgcaccatgcataaat 15559091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 23155534 - 23155567
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  23155534 tgcataaggaaatccttatgcaccctgcataaat 23155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 23334720 - 23334756
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23334720 tgcataaggaaatc-ttatgcaccgtgcataaatccca 23334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 703729 - 703761
Alignment:
Q  274 gcagttatggtgcataagaaaatccttatgcat 306  Q
    |||||||||||||||||| ||||||||||||||    
T  703729 gcagttatggtgcataaggaaatccttatgcat 703761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 23335758 - 23335726
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||| |||||||||||||||||    
T  23335758 tgcataaggaaatccgtatgcaccgtgcataaa 23335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 23948623 - 23948595
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  23948623 gttatggtgcataagaaaatccttatgca 23948595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 34329141 - 34329173
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||| ||||||||||||||||||    
T  34329141 tgcataaggaaatctttatgcaccgtgcataaa 34329173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 39086519 - 39086547
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  39086519 gttatggtgcataagaaaatccttatgca 39086547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 39166382 - 39166354
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  39166382 gttatggtgcataagaaaatccttatgca 39166354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 639029 - 638972
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  639029 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 11786139 - 11786082
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11786139 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 11786082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 11798306 - 11798249
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11798306 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 11798249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 13635626 - 13635683
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13635626 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 13635683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 30597864 - 30597807
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30597864 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 30597807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 45256930 - 45256873
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256930 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 45256873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 49425958 - 49426015
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49425958 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 49426015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 51921166 - 51921223
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 51921223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 358
Target Start/End: Original strand, 49492413 - 49492469
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49492413 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 49492469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 35291451 - 35291506
Alignment:
Q  304 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 35291506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 15051037 - 15051094
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15051037 tgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacc 15051094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 50644705 - 50644652
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50644705 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttccta 50644652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 27865641 - 27865695
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27865641 ataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 27865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 10473683 - 10473626
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10473683 tgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacacc 10473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 26577270 - 26577327
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26577270 tgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacacc 26577327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 53441485 - 53441428
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  53441485 tgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacacc 53441428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 46672603 - 46672546
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  46672603 tgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacacc 46672546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 51836336 - 51836393
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  51836336 tgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacacc 51836393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 48076920 - 48076958
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48076920 atgcataaggaaatccttatgcaccgtgcataaatccca 48076958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 22180215 - 22180252
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22180215 tgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 30358872 - 30358835
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30358872 tgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 1622020 - 1621984
Alignment:
Q  323 accgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||||    
T  1622020 accgtgcataaatcccaacataattgcttcctacacc 1621984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 36011995 - 36011951
Alignment:
Q  315 ccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  36011995 ccttatgcaccgtgtataaatctcaacataattgcttcctacacc 36011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 352
Target Start/End: Complemental strand, 55765635 - 55765596
Alignment:
Q  313 atccttatgcaccgtgcataaatcccaacataattgcttc 352  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  55765635 atccttatgcaccgtgcataaatcccaatataattgcttc 55765596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 50562678 - 50562716
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  50562678 atgcataaggaaatccttatgcatcgtgcataaatccca 50562716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 48077897 - 48077864
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||||||||||||||||||    
T  48077897 atgcataaggaaatccttatgcaccgtgcataaa 48077864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 22181296 - 22181264
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  22181296 tgcataaggaaatccttatgcaccgtgcataaa 22181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 26447463 - 26447431
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  26447463 tgcataaggaaatccttatgcaccgtgcataaa 26447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 27764254 - 27764286
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  27764254 tgcataaggaaatccttatgcaccgtgcataaa 27764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 36621752 - 36621720
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  36621752 tgcataaggaaatccttatgcaccgtgcataaa 36621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 45255989 - 45256021
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  45255989 tgcataaggaaatccttatgcaccgtgcataaa 45256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 50643757 - 50643789
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  50643757 tgcataaggaaatccttatgcaccgtgcataaa 50643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 8165771 - 8165806
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  8165771 tgcataaggaaatccttatgcaccctgcataaatcc 8165806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 17109953 - 17109918
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  17109953 tgcataaggaaatccttatgcaccctgcataaatcc 17109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 21995679 - 21995714
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  21995679 tgcataaggaaatccttatgcaccctgcataaatcc 21995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 25715652 - 25715687
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  25715652 tgcataaggaaatccttatgcaccctgcataaatcc 25715687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 30779352 - 30779387
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  30779352 tgcataaggaaatccttatgcaccttgcataaatcc 30779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 36309425 - 36309460
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  36309425 tgcataaggaaatccttatgcaccctgcataaatcc 36309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 36924250 - 36924285
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  36924250 tgcataaggaaatccttatgcaccctgcataaatcc 36924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 37059720 - 37059755
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  37059720 tgcataaggaaatccttatgcaccttgcataaatcc 37059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 53865278 - 53865243
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  53865278 tgcataaggaaatccttatgcaccctgcataaatcc 53865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 54895618 - 54895583
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  54895618 tgcataaggaaatccttatgcaccctgcataaatcc 54895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 1492681 - 1492715
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  1492681 tgcataaggaaatccttatgcaccctgcataaatc 1492715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 8157324 - 8157290
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  8157324 tgcataaggaaatccttatgcaccctgcataaatc 8157290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 33819700 - 33819734
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  33819700 tgcataaggaaatccttatgcaccctgcataaatc 33819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 51076906 - 51076940
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  51076906 tgcataaggaaatccttatgcaccctgcataaatc 51076940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 2124353 - 2124386
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  2124353 tgcataaggaaatccttatgcaccctgcataaat 2124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 6841830 - 6841863
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  6841830 tgcataaggaaatccttatgcaccctgcataaat 6841863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 333
Target Start/End: Complemental strand, 29826655 - 29826626
Alignment:
Q  304 cataaggaaatccttatgcaccgtgcataa 333  Q
    ||||||||||||||||||||||||||||||    
T  29826655 cataaggaaatccttatgcaccgtgcataa 29826626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 31763143 - 31763110
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  31763143 tgcataaggaaatccttatgcaccctgcataaat 31763110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 38245929 - 38245896
Alignment:
Q  326 gtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||| ||||||||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacc 38245896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 21097154 - 21097186
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||||||||||| |||||    
T  21097154 tgcataaggaaatccttatgcaccgtgtataaa 21097186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 25715769 - 25715741
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  25715769 gttatggtgcataagaaaatccttatgca 25715741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 36309659 - 36309631
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  36309659 gttatggtgcataagaaaatccttatgca 36309631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 53526253 - 53526281
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  53526253 gttatggtgcataagaaaatccttatgca 53526281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 54895406 - 54895434
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  54895406 gttatggtgcataagaaaatccttatgca 54895434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 23817475 - 23817418
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23817475 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 23817418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 24636091 - 24636034
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24636091 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 24636034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 48762232 - 48762289
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48762232 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 48762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 49936838 - 49936895
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49936838 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 49936895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 361
Target Start/End: Original strand, 19897661 - 19897720
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19897661 tgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacacctc 19897720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 16976120 - 16976063
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16976120 tgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacc 16976063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 21641603 - 21641660
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21641603 tgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacacc 21641660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 43452707 - 43452650
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43452707 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacc 43452650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 11422605 - 11422548
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11422605 tgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacacc 11422548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 18618999 - 18618943
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18618999 tgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctacacc 18618943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 20434623 - 20434680
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  20434623 tgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacacc 20434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 23174411 - 23174468
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23174411 tgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacc 23174468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 23920980 - 23921037
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  23920980 tgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacc 23921037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 6314281 - 6314226
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctaca 357  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6314281 tgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctaca 6314226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 305 - 358
Target Start/End: Complemental strand, 180885 - 180832
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacac 358  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  180885 ataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacac 180832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 4097119 - 4097175
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  4097119 tgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctacacc 4097175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 25888930 - 25888986
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  25888930 tgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctacacc 25888986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 50351956 - 50351911
Alignment:
Q  314 tccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacacc 50351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 34370537 - 34370493
Alignment:
Q  317 ttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacacctc 34370493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 8401423 - 8401470
Alignment:
Q  314 tccttatgcaccgtgcataaatcccaacataattgcttcctacacctc 361  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacacctc 8401470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 339
Target Start/End: Complemental strand, 18057841 - 18057807
Alignment:
Q  305 ataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||||||||||||||||||||||||    
T  18057841 ataaggaaatccttatgcaccgtgcataaatccca 18057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 16115864 - 16115897
Alignment:
Q  301 atgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||||||||||||||||||    
T  16115864 atgcataaggaaatccttatgcaccgtgcataaa 16115897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 21255849 - 21255886
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  21255849 tgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 18056798 - 18056830
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  18056798 tgcataaggaaatccttatgcaccgtgcataaa 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 9628634 - 9628599
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  9628634 tgcataaggaaatccttatgcaccctgcataaatcc 9628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 14389853 - 14389888
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  14389853 tgcataaggaaatccttatgcaccctgcataaatcc 14389888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 17893081 - 17893116
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  17893081 tgcataaggaaatccttatgcaccctgcataaatcc 17893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 18928787 - 18928822
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  18928787 tgcataaggaaatccttatgcaccctgcataaatcc 18928822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 33157001 - 33157036
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  33157001 tgcataaggaaatccttatgcaccctgcataaatcc 33157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 42134168 - 42134133
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  42134168 tgcataaggaaatccttatgcaccctgcataaatcc 42134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 45849117 - 45849152
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  45849117 tgcataaggaaatccttatgcaccctgcataaatcc 45849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 1395386 - 1395353
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  1395386 tgcataaggaaatccttatgcaccatgcataaat 1395353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 10974642 - 10974675
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  10974642 tgcataaggaaatccttatgcaccctgcataaat 10974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 14229181 - 14229214
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  14229181 tgcataaggaaatccttatgcaccctgcataaat 14229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 17893308 - 17893275
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  17893308 tgcataaggaaatccttatgcaccctgcataaat 17893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 31084437 - 31084404
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||| |||||||||||||    
T  31084437 tgcataaggaaatccttatgtaccgtgcataaat 31084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 11422619 - 11422583
Alignment:
Q  270 gggagcagttatggtgcataagaaaatccttatgcat 306  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  11422619 gggagcggttatggtgcataaggaaatccttatgcat 11422583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 22348053 - 22348085
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||||||||| |||||||    
T  22348053 tgcataaggaaatccttatgcaccgcgcataaa 22348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 23920966 - 23921002
Alignment:
Q  270 gggagcagttatggtgcataagaaaatccttatgcat 306  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcat 23921002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 24368654 - 24368626
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  24368654 gttatggtgcataagaaaatccttatgca 24368626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 45890643 - 45890607
Alignment:
Q  269 agggagcagttatggtgcataagaaaatccttatgca 305  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  45890643 agggagcggttatggtgtataagaaaatccttatgca 45890607  T

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Target: scaffold0571 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 554 - 611
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  554 tgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacc 611  T

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Target: scaffold0338 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 6548 - 6491
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6548 tgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacc 6491  T

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Target: scaffold0045 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 33849 - 33792
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33849 tgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacacc 33792  T

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Target: scaffold0581 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 359
Target Start/End: Original strand, 8333 - 8379
Alignment:
Q  313 atccttatgcaccgtgcataaatcccaacataattgcttcctacacc 359  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacacc 8379  T

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Target: scaffold0238 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 25283 - 25251
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    |||||||||||||||||||||||||||||||||    
T  25283 tgcataaggaaatccttatgcaccgtgcataaa 25251  T

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Target: scaffold0516 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Complemental strand, 1283 - 1248
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  1283 tgcataaggaaatccttatgcaccctgcataaatcc 1248  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 23553 - 23588
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  23553 tgcataaggaaatccttatgcaccctgcataaatcc 23588  T

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Target: scaffold0249; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Complemental strand, 23770 - 23736
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  23770 tgcataaggaaatccttatgcaccctgcataaatc 23736  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 51914 - 51949
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatcc 337  Q
    |||||||||||||||||||||||| |||||||||||    
T  51914 tgcataaggaaatccttatgcaccctgcataaatcc 51949  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 202921 - 202958
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  202921 tgcataaggaaatcattatgcaccgtgcacaaatccca 202958  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 305
Target Start/End: Original strand, 95998 - 96029
Alignment:
Q  274 gcagttatggtgcataagaaaatccttatgca 305  Q
    ||||||||||||||||||||||||||||||||    
T  95998 gcagttatggtgcataagaaaatccttatgca 96029  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 33625 - 33659
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatc 336  Q
    |||||||||||||||||||||||| ||||||||||    
T  33625 tgcataaggaaatccttatgcaccctgcataaatc 33659  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Complemental strand, 28710 - 28673
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaatccca 339  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  28710 tgcataaggaaatccttttgcaccgtgcttaaatccca 28673  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 335
Target Start/End: Complemental strand, 20155 - 20122
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaat 335  Q
    |||||||||||||||||||||||| |||||||||    
T  20155 tgcataaggaaatccttatgcaccctgcataaat 20122  T

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Target: scaffold0544 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 10726 - 10694
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||| |||||||||||||    
T  10726 tgcataaggaaatccttatacaccgtgcataaa 10694  T

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Target: scaffold0097 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 334
Target Start/End: Original strand, 13627 - 13659
Alignment:
Q  302 tgcataaggaaatccttatgcaccgtgcataaa 334  Q
    ||||||||||||||||||| |||||||||||||    
T  13627 tgcataaggaaatccttatccaccgtgcataaa 13659  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 20979 - 21007
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  20979 gttatggtgcataagaaaatccttatgca 21007  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 305
Target Start/End: Complemental strand, 80909 - 80881
Alignment:
Q  277 gttatggtgcataagaaaatccttatgca 305  Q
    |||||||||||||||||||||||||||||    
T  80909 gttatggtgcataagaaaatccttatgca 80881  T

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