View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1383_low_28 (Length: 252)

Name: NF1383_low_28
Description: NF1383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1383_low_28
NF1383_low_28
[»] chr4 (43 HSPs)
chr4 (16-252)||(2713820-2714056)
chr4 (16-126)||(31876787-31876897)
chr4 (16-125)||(25370369-25370478)
chr4 (16-125)||(48091072-48091181)
chr4 (16-127)||(12639963-12640074)
chr4 (16-114)||(28223574-28223672)
chr4 (16-126)||(33569719-33569829)
chr4 (16-125)||(20422708-20422817)
chr4 (16-114)||(20075536-20075634)
chr4 (29-126)||(199216-199313)
chr4 (16-125)||(388753-388862)
chr4 (16-125)||(32291015-32291124)
chr4 (16-125)||(36944610-36944719)
chr4 (16-124)||(26424381-26424489)
chr4 (16-114)||(389382-389480)
chr4 (35-125)||(40847677-40847767)
chr4 (16-114)||(52597501-52597599)
chr4 (16-125)||(37567451-37567560)
chr4 (16-125)||(55815825-55815934)
chr4 (16-114)||(199010-199108)
chr4 (16-114)||(25369794-25369892)
chr4 (40-114)||(26423770-26423844)
chr4 (16-114)||(32902442-32902540)
chr4 (16-114)||(36945200-36945298)
chr4 (16-114)||(55816427-55816525)
chr4 (16-125)||(52597688-52597797)
chr4 (16-124)||(32901852-32901960)
chr4 (19-114)||(12640566-12640661)
chr4 (16-114)||(48782051-48782149)
chr4 (16-127)||(29809064-29809175)
chr4 (16-86)||(20076163-20076233)
chr4 (16-114)||(40345107-40345205)
chr4 (35-114)||(36111213-36111291)
chr4 (35-127)||(6862645-6862737)
chr4 (16-114)||(20422142-20422237)
chr4 (16-112)||(40344516-40344612)
chr4 (16-87)||(37566941-37567012)
chr4 (16-114)||(35427257-35427354)
chr4 (20-114)||(40848111-40848205)
chr4 (40-114)||(48090477-48090551)
chr4 (20-125)||(31842704-31842808)
chr4 (40-109)||(47328397-47328466)
chr4 (16-81)||(31877409-31877474)
[»] chr8 (35 HSPs)
chr8 (16-125)||(11999057-11999166)
chr8 (16-125)||(33114165-33114274)
chr8 (16-127)||(16889193-16889304)
chr8 (16-125)||(7818474-7818583)
chr8 (28-127)||(16879886-16879985)
chr8 (16-114)||(11998467-11998565)
chr8 (16-125)||(39852154-39852263)
chr8 (16-125)||(43480616-43480725)
chr8 (16-125)||(43591593-43591702)
chr8 (16-95)||(16889805-16889884)
chr8 (16-95)||(30115397-30115476)
chr8 (16-114)||(7819074-7819172)
chr8 (16-114)||(16880495-16880593)
chr8 (29-127)||(35237257-35237355)
chr8 (16-114)||(39852780-39852878)
chr8 (16-114)||(44061996-44062094)
chr8 (16-125)||(40309477-40309586)
chr8 (16-95)||(2209036-2209115)
chr8 (16-95)||(38778184-38778263)
chr8 (16-95)||(43481258-43481337)
chr8 (16-114)||(43591018-43591116)
chr8 (35-114)||(36848193-36848272)
chr8 (16-127)||(44062573-44062684)
chr8 (16-126)||(4374969-4375079)
chr8 (16-114)||(30115973-30116071)
chr8 (16-114)||(33113586-33113684)
chr8 (16-81)||(4374278-4374343)
chr8 (16-81)||(10805992-10806057)
chr8 (28-120)||(10806426-10806518)
chr8 (16-114)||(4373697-4373795)
chr8 (40-114)||(35237865-35237938)
chr8 (16-114)||(38778772-38778870)
chr8 (35-114)||(40907610-40907688)
chr8 (76-125)||(43434701-43434750)
chr8 (81-125)||(37532576-37532620)
[»] chr3 (44 HSPs)
chr3 (16-127)||(3944893-3945004)
chr3 (16-125)||(23584860-23584969)
chr3 (16-125)||(23599683-23599792)
chr3 (16-125)||(37373965-37374074)
chr3 (16-125)||(50687685-50687794)
chr3 (16-125)||(25025174-25025283)
chr3 (16-125)||(32672166-32672275)
chr3 (17-125)||(48219213-48219321)
chr3 (16-114)||(24220590-24220688)
chr3 (16-114)||(29342352-29342450)
chr3 (16-126)||(44868006-44868116)
chr3 (16-114)||(48218602-48218700)
chr3 (16-127)||(42356231-42356345)
chr3 (16-126)||(19555269-19555379)
chr3 (16-114)||(25025741-25025839)
chr3 (19-125)||(31014904-31015010)
chr3 (16-114)||(44868595-44868693)
chr3 (16-114)||(55281846-55281944)
chr3 (16-117)||(37375445-37375546)
chr3 (16-87)||(29342970-29343041)
chr3 (16-114)||(8427720-8427818)
chr3 (16-126)||(37374819-37374924)
chr3 (16-80)||(32672760-32672824)
chr3 (16-112)||(41875593-41875689)
chr3 (16-95)||(47737650-47737729)
chr3 (16-114)||(37374583-37374681)
chr3 (16-81)||(49752317-49752382)
chr3 (16-125)||(55282398-55282506)
chr3 (19-91)||(31014371-31014443)
chr3 (16-75)||(19555900-19555959)
chr3 (16-87)||(38575619-38575690)
chr3 (16-79)||(40887918-40887981)
chr3 (16-95)||(49752887-49752966)
chr3 (16-114)||(23584248-23584346)
chr3 (16-114)||(23599071-23599169)
chr3 (16-81)||(38575065-38575130)
chr3 (16-81)||(43658872-43658937)
chr3 (16-125)||(50675102-50675211)
chr3 (16-81)||(24221149-24221214)
chr3 (29-123)||(43103901-43103995)
chr3 (16-114)||(50674640-50674733)
chr3 (16-72)||(8427269-8427325)
chr3 (50-114)||(41459141-41459204)
chr3 (16-80)||(47737108-47737172)
[»] chr2 (35 HSPs)
chr2 (19-126)||(20244151-20244258)
chr2 (16-126)||(9224265-9224375)
chr2 (16-114)||(3595257-3595355)
chr2 (16-126)||(7583770-7583880)
chr2 (16-125)||(7716671-7716780)
chr2 (16-125)||(11256717-11256826)
chr2 (16-125)||(28223788-28223897)
chr2 (16-125)||(4386937-4387046)
chr2 (16-125)||(6849519-6849628)
chr2 (16-125)||(16571118-16571227)
chr2 (16-112)||(39477302-39477398)
chr2 (9-120)||(16903059-16903170)
chr2 (16-114)||(10883298-10883396)
chr2 (16-114)||(11256127-11256225)
chr2 (35-125)||(30161933-30162023)
chr2 (19-114)||(28224368-28224463)
chr2 (16-114)||(6849299-6849397)
chr2 (16-114)||(7583143-7583241)
chr2 (16-122)||(8113277-8113383)
chr2 (16-125)||(3595872-3595981)
chr2 (16-114)||(16571703-16571801)
chr2 (16-114)||(16887594-16887692)
chr2 (19-125)||(33847873-33847979)
chr2 (16-125)||(8963504-8963613)
chr2 (16-91)||(467139-467214)
chr2 (35-110)||(467337-467412)
chr2 (16-95)||(20243583-20243662)
chr2 (16-114)||(7717262-7717359)
chr2 (16-74)||(17918662-17918720)
chr2 (19-91)||(40165907-40165979)
chr2 (16-82)||(17918064-17918130)
chr2 (16-95)||(39476545-39476624)
chr2 (35-114)||(40166839-40166918)
chr2 (84-125)||(18949909-18949950)
chr2 (16-114)||(8112691-8112786)
[»] chr7 (28 HSPs)
chr7 (16-125)||(36682835-36682944)
chr7 (16-114)||(30711799-30711897)
chr7 (16-125)||(46732567-46732676)
chr7 (16-125)||(47813971-47814080)
chr7 (16-122)||(4895059-4895165)
chr7 (16-126)||(46815039-46815148)
chr7 (16-125)||(27855566-27855674)
chr7 (16-114)||(36683441-36683539)
chr7 (16-126)||(42455920-42456030)
chr7 (16-114)||(47814612-47814710)
chr7 (16-119)||(22276053-22276156)
chr7 (16-114)||(19816275-19816373)
chr7 (16-114)||(24044020-24044118)
chr7 (16-114)||(34853402-34853500)
chr7 (16-125)||(34853973-34854082)
chr7 (16-103)||(32499849-32499936)
chr7 (16-122)||(19816869-19816975)
chr7 (16-109)||(4894515-4894608)
chr7 (16-81)||(32499293-32499358)
chr7 (16-117)||(46814413-46814514)
chr7 (16-91)||(33806003-33806078)
chr7 (16-114)||(22275436-22275533)
chr7 (16-114)||(24323959-24324056)
chr7 (16-114)||(42456493-42456591)
chr7 (16-81)||(18520901-18520966)
chr7 (16-125)||(36620118-36620227)
chr7 (16-79)||(36620717-36620780)
chr7 (16-77)||(46012918-46012978)
[»] chr1 (30 HSPs)
chr1 (16-112)||(51248460-51248556)
chr1 (16-123)||(27816981-27817088)
chr1 (18-125)||(49534375-49534482)
chr1 (19-125)||(6288184-6288290)
chr1 (16-114)||(43368812-43368910)
chr1 (16-125)||(1403040-1403149)
chr1 (16-125)||(8560156-8560265)
chr1 (16-125)||(42838937-42839046)
chr1 (16-111)||(42839525-42839620)
chr1 (16-95)||(49533773-49533852)
chr1 (16-114)||(8560720-8560817)
chr1 (16-114)||(52859765-52859863)
chr1 (16-125)||(27797713-27797822)
chr1 (16-112)||(41563192-41563288)
chr1 (16-80)||(41563769-41563833)
chr1 (19-114)||(42839712-42839807)
chr1 (16-114)||(1403665-1403762)
chr1 (16-114)||(27797128-27797226)
chr1 (16-82)||(37725422-37725488)
chr1 (16-114)||(48843591-48843689)
chr1 (16-81)||(48843939-48844004)
chr1 (16-103)||(27934272-27934358)
chr1 (16-87)||(51247866-51247937)
chr1 (16-114)||(7219625-7219722)
chr1 (16-125)||(7782668-7782777)
chr1 (16-117)||(42840290-42840391)
chr1 (16-81)||(48369526-48369591)
chr1 (16-112)||(43368203-43368299)
chr1 (16-87)||(6287658-6287729)
chr1 (16-81)||(7219052-7219117)
[»] scaffold0007 (1 HSPs)
scaffold0007 (16-125)||(11266-11374)
[»] chr6 (13 HSPs)
chr6 (16-125)||(6032730-6032839)
chr6 (16-125)||(5523823-5523932)
chr6 (16-125)||(30611322-30611431)
chr6 (16-125)||(33668221-33668330)
chr6 (16-126)||(13936617-13936727)
chr6 (16-113)||(30610723-30610820)
chr6 (16-124)||(12809679-12809787)
chr6 (17-125)||(31723833-31723941)
chr6 (16-114)||(5523211-5523309)
chr6 (16-114)||(6032169-6032267)
chr6 (16-114)||(12809080-12809178)
chr6 (16-112)||(13944303-13944399)
chr6 (35-114)||(33668826-33668905)
[»] chr5 (18 HSPs)
chr5 (16-126)||(3957499-3957609)
chr5 (19-125)||(5324383-5324489)
chr5 (16-114)||(4928882-4928980)
chr5 (16-126)||(4929483-4929593)
chr5 (16-126)||(33430042-33430151)
chr5 (16-114)||(3739640-3739738)
chr5 (16-87)||(42408542-42408613)
chr5 (16-125)||(8813660-8813769)
chr5 (16-125)||(28075946-28076055)
chr5 (16-114)||(26687511-26687609)
chr5 (16-114)||(26957242-26957340)
chr5 (19-114)||(3958114-3958209)
chr5 (16-74)||(26688034-26688092)
chr5 (16-74)||(26957765-26957823)
chr5 (16-81)||(3739044-3739109)
chr5 (22-78)||(21770045-21770101)
chr5 (35-103)||(42408014-42408082)
chr5 (76-113)||(21770490-21770527)
[»] scaffold0229 (1 HSPs)
scaffold0229 (16-125)||(15210-15319)
[»] scaffold1095 (1 HSPs)
scaffold1095 (16-114)||(1496-1594)
[»] scaffold0368 (1 HSPs)
scaffold0368 (19-125)||(11764-11870)


Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 16 - 252
Target Start/End: Original strand, 2713820 - 2714056
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||  |||||| ||||||||||     
T  2713820 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtg 2713919  T
Q  116 aaatgccaccaagtttcaatgcaagaagagttgtccttttcatacaaatttgatagagatttattatgacacattttagaaagttagggcgattcaaata 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2713920 aaatgccaccaagtttcaatgcaagaagagttgtccttttcatacaaatttgatagagatttattatgacacattttagaaagttagggcgattcaaata 2714019  T
Q  216 gaacgttagttacatccgactgtaaatggatattaca 252  Q
    |||||||||||||||||||||||||||||||||||||    
T  2714020 gaacgttagttacatccgactgtaaatggatattaca 2714056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 31876897 - 31876787
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| |||  |||||| ||||||||||     
T  31876897 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtg 31876798  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  31876797 aaatgccacca 31876787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 25370369 - 25370478
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| |||||||||||    
T  25370369 atctagttttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgta 25370468  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  25370469 aaatgccacc 25370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 48091072 - 48091181
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||| |||||| |||||||| |     
T  48091072 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatg 48091171  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  48091172 aaatgccacc 48091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 12640074 - 12639963
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||     
T  12640074 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtg 12639975  T
Q  116 aaatgccaccaa 127  Q
    ||||||||||||    
T  12639974 aaatgccaccaa 12639963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 28223672 - 28223574
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||| | ||||||| |||||| ||||||||||    
T  28223672 atctagtgttgagagagcgtgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatagagggaaaagattaacctttcccatgt 28223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 33569829 - 33569719
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| |||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||  ||| || ||||||||||     
T  33569829 atctagtgttgaaagagcatgttgagaatatgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtg 33569730  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  33569729 aaatgccacca 33569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 20422708 - 20422817
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| |||  |||||  ||||||||||     
T  20422708 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtg 20422807  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  20422808 aaatgccacc 20422817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20075634 - 20075536
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  20075634 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 20075536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 199216 - 199313
Alignment:
Q  29 agagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccacca 126  Q
    ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| |||||||||| |||||||||||    
T  199216 agagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 388862 - 388753
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||| |||||||| ||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  388862 atctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 388763  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  388762 aaatgccacc 388753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 32291124 - 32291015
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||| | |||||  |||||| ||||||||||     
T  32291124 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatgattggaaatgattaacctttcccatgtg 32291025  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  32291024 aaatgccacc 32291015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 36944719 - 36944610
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| |||| |||||| |||| | |||     
T  36944719 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaagattaacctttcacgtgtg 36944620  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  36944619 aaatgccacc 36944610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 26424381 - 26424489
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| ||| || |||| ||||||||||     
T  26424381 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaagaactaacctttcccatgtg 26424480  T
Q  116 aaatgccac 124  Q
    |||||||||    
T  26424481 aaatgccac 26424489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 389382 - 389480
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| | |||||||||||||| ||||||||||||  |||||| ||||||||||    
T  389382 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgt 389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 40847767 - 40847677
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccacc 125  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||  |||||| ||| |||||| ||||||||||    
T  40847767 tgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaaatgccacc 40847677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 52597599 - 52597501
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||| |||||| ||||||||||    
T  52597599 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgt 52597501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 37567451 - 37567560
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||  ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||     
T  37567451 atctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtg 37567550  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  37567551 aaatgacacc 37567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 55815934 - 55815825
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||  |||||| || |||||||||||||||| ||| ||||||| |||||||||||||||  ||| ||||||||  |||||| ||||||||||     
T  55815934 atctagtgttaagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtg 55815835  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  55815834 aaatgccacc 55815825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 199108 - 199010
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||  ||||||  ||||||||||||  |||||| ||||||||||    
T  199108 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgt 199010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 25369892 - 25369794
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||| |||| |||  |||||| ||||||||||    
T  25369892 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgt 25369794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 26423844 - 26423770
Alignment:
Q  40 agaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgt 26423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 32902442 - 32902540
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||| |||||| |||| |||||    
T  32902442 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgt 32902540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 36945200 - 36945298
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||    
T  36945200 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgt 36945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 55816427 - 55816525
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||  ||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  55816427 atctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 55816525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 52597688 - 52597797
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| || |||||||||||||||| ||| ||||||| |||||||||||||||   ||||||  |||  |||||| ||||||||||     
T  52597688 atctagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtg 52597787  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  52597788 aaatgccacc 52597797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 32901960 - 32901852
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| || ||| ||||||||||||||||||  ||| ||||||| |||||||||||||||  |||||||| |||  || | ||||||||||||     
T  32901960 atctagtgttgagaaagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaaggataatcttttcccatgtg 32901861  T
Q  116 aaatgccac 124  Q
    |||||||||    
T  32901860 aaatgccac 32901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 12640566 - 12640661
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||||| |||||||||||||||  ||||||||||||  |||||  ||||||||||    
T  12640566 tagtgttgagagaacatgttaaaaatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgt 12640661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 48782051 - 48782149
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||| |||||||||||| ||| ||||||| |||||||||||||||  ||||||| ||||  |||||| ||||||||||    
T  48782051 atctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgt 48782149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 29809064 - 29809175
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||| |  ||||  |||||| |||||||| |     
T  29809064 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatg 29809163  T
Q  116 aaatgccaccaa 127  Q
    ||||||||||||    
T  29809164 aaatgccaccaa 29809175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 20076163 - 20076233
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcat 86  Q
    |||||| |||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||    
T  20076163 atctagagttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcat 20076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 40345107 - 40345205
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | | |||| |||||||||||| ||| ||||||| |||||||| ||||||  ||| ||||||||| |||||| ||||||||||    
T  40345107 atctagtgttgagagaccatattaaaaatatgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgt 40345205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 36111213 - 36111291
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||| |||  ||||||||||||  |||||| ||||||||||    
T  36111213 tgttaagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgggaaaggattaacctttcccatgt 36111291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 6862737 - 6862645
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccaccaa 127  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||||||   ||||| | |||| ||| || ||||| |||| ||||||||||||    
T  6862737 tgttaagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaagattgacctttcctatgtgaaatgccaccaa 6862645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 20422237 - 20422142
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| |||||||||||||   ||| ||| ||||||| |||||||| | ||||  ||||||||||||  |||||| ||||||||||    
T  20422237 atctagtgttgagagagcatgttaagaatatg---ttcacttaatctaatcattgaatctacctttcccatggtgggaaaggattaacctttcccatgt 20422142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 40344612 - 40344516
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||||| || ||||  |||||  ||||||||    
T  40344612 atctagtgttaagagaacatgttaagaatatgttcttcacttaatctaataatttaatccaactttctcatgatgagaaaggattaaactttcccat 40344516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 37567012 - 37566941
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| || |||| |||||||| || ||| |||||    
T  37567012 atctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatctaattttctcatg 37566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 35427354 - 35427257
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||| ||||||||||| |||  ||||| || |||  |||||| ||||||||||    
T  35427354 atctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaaaggattaacctttcccatgt 35427257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 40848111 - 40848205
Alignment:
Q  20 agtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||| ||| ||||  |||||| ||| ||||||    
T  40848111 agtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgt 40848205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 48090551 - 48090477
Alignment:
Q  40 agaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||| | ||| ||||||| |||||||||||||||  |||||||||||   |||||| ||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgt 48090477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 31842704 - 31842808
Alignment:
Q  20 agtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaat 119  Q
    ||||||| |||| | |||||| |||||||||||| ||| ||||||| ||||||||| |||||  |||||| |||||  |||||| ||||  |||||||||    
T  31842704 agtgttgagagaacatgttaataatatgttcttcacttaatctaatcattgaatcc-actttcccatggttggaaatgattaacctttcatatgtaaaat 31842802  T
Q  120 gccacc 125  Q
    | ||||    
T  31842803 gtcacc 31842808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 47328397 - 47328466
Alignment:
Q  40 agaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcc 109  Q
    |||||||||||||| ||| |||||||||||||||| ||||||| ||| || |||||| || ||| |||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttttccatagtaggaaaagatgaacctttcc 47328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 31877409 - 31877474
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| || | | |||||| |||||||||||| ||| ||||||| ||| |||||||||||    
T  31877409 atctagtgttgagataacatgttaaaaatatgttcttcacttaatctaatcattaaatccaacttt 31877474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 11999057 - 11999166
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  11999057 atctagtgttgagagagcatgttaagaatatgttcttcacttcatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtg 11999156  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  11999157 aaatgccacc 11999166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 33114165 - 33114274
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  33114165 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 33114264  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  33114265 aaatgccacc 33114274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 16889304 - 16889193
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| || |||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||| |||||| ||||||||||     
T  16889304 atctagtgttgaaagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtg 16889205  T
Q  116 aaatgccaccaa 127  Q
    ||||||||||||    
T  16889204 aaatgccaccaa 16889193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 7818583 - 7818474
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| || |||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  7818583 atctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 7818484  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  7818483 aaatgccacc 7818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 16879985 - 16879886
Alignment:
Q  28 gagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccaccaa 127  Q
    |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||| | |||||  ||||||||||||||||| ||||||||||||    
T  16879985 gagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatgataggaaatgattaacttttcccatgtgaaatgccaccaa 16879886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 11998565 - 11998467
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  11998565 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 11998467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 39852263 - 39852154
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| | |||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||  |||||| |||||||| |     
T  39852263 atctagtgttgagggagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttg 39852164  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  39852163 aaatgccacc 39852154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 43480725 - 43480616
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||| |||||||||||  |||||||  |||| |||||| ||||||||||     
T  43480725 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtg 43480626  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  43480625 aaatgccacc 43480616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 43591593 - 43591702
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||  |||||| ||||||||||||||||||| ||| ||||||| ||||| || ||||||  |||||||||||| ||||||| ||||||||||     
T  43591593 atctagtgttaagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtg 43591692  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  43591693 aaatgacacc 43591702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 16889805 - 16889884
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||    
T  16889805 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactttcccatggtgggaaa 16889884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 30115476 - 30115397
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||    
T  30115476 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaa 30115397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 7819074 - 7819172
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||| |||||  ||||||||||    
T  7819074 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgt 7819172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 16880495 - 16880593
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||  |||||  ||||||||||    
T  16880495 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgt 16880593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 35237355 - 35237257
Alignment:
Q  29 agagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccaccaa 127  Q
    ||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| |||||||||| ||||| ||||||    
T  35237355 agagcatgttaagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgtcaccaa 35237257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 39852780 - 39852878
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| |||||||||||| |||||| ||| ||||||| |||||||| |||||||| |||||||||||  |||||| |||| |||||    
T  39852780 atctagtgttgagagagcatgttaagaatatattcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgt 39852878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 44062094 - 44061996
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||| |||||  |||||| |||| |||||    
T  44062094 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgt 44061996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 40309477 - 40309586
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||   |||||||||||  |||||| ||| | ||||     
T  40309477 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaatgattaaccttttctatgtg 40309576  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  40309577 aaatgtcacc 40309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 2209115 - 2209036
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| ||||||||||||||| ||| ||| ||||||| |||||||| |||||| |||||||||||||    
T  2209115 atctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatcgaactttctcatggtgggaaa 2209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 38778263 - 38778184
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||    
T  38778263 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaa 38778184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 43481258 - 43481337
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| |||||| |||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||    
T  43481258 atctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaa 43481337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 43591116 - 43591018
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||||||||||||||||  || ||||||| ||||||| |||||||  ||||||||||||  |||||| ||||||||||    
T  43591116 atctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgt 43591018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 36848193 - 36848272
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| |||  |||||  ||||||||||    
T  36848193 tgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgt 36848272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 44062573 - 44062684
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||| ||||| |||| | ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||| || |     
T  44062573 atctagtgttgagagagcatgttaataatatattctccacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcctatatg 44062672  T
Q  116 aaatgccaccaa 127  Q
    ||||||||||||    
T  44062673 aaatgccaccaa 44062684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 4374969 - 4375079
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| |||||| |||||||||||| ||| ||| ||| ||||||||||||||| ||||||||| |||  ||| |  |||||||| |     
T  4374969 atctagtgttgaaagagcatgttaaaaatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaaatgattcatctttcccatatg 4375068  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  4375069 aaatgccacca 4375079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 30115973 - 30116071
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||||||||| |||||  ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||    
T  30115973 atctagtgttgagagaacatgttaagaatatattctttacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgt 30116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 33113684 - 33113586
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||  |||| | |||||||||||| |||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||  ||||||||||    
T  33113684 atctagtgttaagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaatctttcccatgt 33113586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 4374278 - 4374343
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  4374278 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 4374343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 10806057 - 10805992
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||||| |||||||||||||||||||  || ||||||| |||||||||||||||    
T  10806057 atctagtgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaacttt 10805992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 10806426 - 10806518
Alignment:
Q  28 gagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatg 120  Q
    |||||| ||||||||||||||||||  ||| || |||| |||||||| ||||||  |||||| |||||| |||||| |||||||||| |||||    
T  10806426 gagagcatgttaagaatatgttctttacttaatttaatcattgaatcaaactttcccatggtaggaaaagattaacctttcccatgtgaaatg 10806518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 4373795 - 4373697
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| || |||| ||||||| |||||||   ||| |||||||  |||||| ||||||||||    
T  4373795 atctagtgttgcgagaacatgttaagaatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgt 4373697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 35237865 - 35237938
Alignment:
Q  40 agaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||  |||||||||||  |||||| ||||||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaat-caacttttctatggtgggaaaggattaacctttcccatgt 35237938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 38778772 - 38778870
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||  |||||| ||||| |||||| ||| ||||||| ||||||| ||||||| |||||||| ||||  |||||| |||| |||||    
T  38778772 atctagtgttgagagagtatgttaaaaatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgt 38778870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 40907688 - 40907610
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||||||||||| ||| ||||||| ||||||| |||||||  | ||||||||||  |||||| ||||||||||    
T  40907688 tgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccgtggtgggaaaggattaacctttcccatgt 40907610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 43434701 - 43434750
Alignment:
Q  76 aactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccacc 125  Q
    ||||||| ||||||||||||| ||| || |||||||||| ||||||||||    
T  43434701 aacttttccatggtgggaaaagattcacctttcccatgttaaatgccacc 43434750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 37532620 - 37532576
Alignment:
Q  81 tttcatggtgggaaaaaattaacttttcccatgtaaaatgccacc 125  Q
    |||||||||||||||  |||||| |||||||||| ||||||||||    
T  37532620 tttcatggtgggaaaggattaacctttcccatgtgaaatgccacc 37532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 3945004 - 3944893
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  3945004 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 3944905  T
Q  116 aaatgccaccaa 127  Q
    ||||||||||||    
T  3944904 aaatgccaccaa 3944893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 23584860 - 23584969
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  23584860 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtg 23584959  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  23584960 aaatgccacc 23584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 23599683 - 23599792
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  23599683 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtg 23599782  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  23599783 aaatgccacc 23599792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 37374074 - 37373965
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| || | | ||||||||||||||||||| ||| || |||| |||||||||||||||  ||||||||||||| |||||| |||||||||||    
T  37374074 atctagtgttgagaaaacatgttaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgta 37373975  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  37373974 aaatgccacc 37373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 50687685 - 50687794
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  |||||||||||| ||||||| ||||||||||     
T  50687685 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtg 50687784  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  50687785 aaatgtcacc 50687794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25025283 - 25025174
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  |||| |||||||  |||||| ||||||||||     
T  25025283 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtg 25025184  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  25025183 aaatgccacc 25025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 32672275 - 32672166
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| | ||||||||||||||||| ||| ||||||| ||| |||||||||||  |||| |||||||  |||||| |||||||||||    
T  32672275 atctagtgttgagagagcatattaagaatatgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccatgta 32672176  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  32672175 aaatgccacc 32672166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 48219213 - 48219321
Alignment:
Q  17 tctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaa 116  Q
    |||||||||| |||||| |||||||||||| ||| || ||| ||||||| ||||||||||| |||  ||||||| |||| ||||||| ||||||||||||    
T  48219213 tctagtgttgagagagcatgttaagaatatattcatcacttaatctaatcattgaatccaattttcccatggtgagaaagaattaacctttcccatgtaa 48219312  T
Q  117 aatgccacc 125  Q
    |||||||||    
T  48219313 aatgccacc 48219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 24220688 - 24220590
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| |||| || ||||||||||| |||| |||||| ||||| ||||||| ||||||||||    
T  24220688 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgt 24220590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 29342450 - 29342352
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||| | | |||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||| |||||| ||||||||||    
T  29342450 atctagtgtggagggagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgt 29342352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 44868116 - 44868006
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||  ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||| ||||     
T  44868116 atctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaatgattaacctttcctatgtg 44868017  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  44868016 aaatgccacca 44868006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 48218700 - 48218602
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||| ||| ||||||||| |||||| |||| |||||    
T  48218700 atctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaaagattaacctttctcatgt 48218602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 42356345 - 42356231
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttca---tggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||   ||||||||||  ||| || ||||||||    
T  42356345 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggtgggaaaggattgacctttcccat 42356246  T
Q  113 gtaaaatgccaccaa 127  Q
    || ||||||||||||    
T  42356245 gtgaaatgccaccaa 42356231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 19555379 - 19555269
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||| |||||||||||  |||| |||||||| |||||| |||  |||||     
T  19555379 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactttcccatgatgggaaaagattaacctttttcatgtg 19555280  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  19555279 aaatgccacca 19555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 25025741 - 25025839
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||| ||||||  ||||||||||||  |||||| ||||||||||    
T  25025741 atctagtgttgagagaacatgttaagaatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatgt 25025839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 31014904 - 31015010
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    |||||||| |||||| || |||||||||||||||| ||| ||||||| |||||||||||||||   ||| |||||||| |||||| |||||||| | |||    
T  31014904 tagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaagattaacctttcccatatgaaa 31015003  T
Q  119 tgccacc 125  Q
    |||||||    
T  31015004 tgccacc 31015010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 44868595 - 44868693
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| || |||  ||||||||||||  |||||| ||||||||||    
T  44868595 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgt 44868693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 55281944 - 55281846
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||| ||||||| |||  ||||||||||||  |||||| ||||||||||    
T  55281944 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgt 55281846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 37375445 - 37375546
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||| | ||||||||| ||||||||| ||| ||||||| || |||||||||||| | |||||||||||  |||||| |||||||||||    
T  37375445 atctagtgttgagagaacatgttaagaagatgttcttcacttaatctaatcatcgaatccaactttcttatggtgggaaaggattaacctttcccatgta 37375544  T
Q  116 aa 117  Q
    ||    
T  37375545 aa 37375546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 29342970 - 29343041
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  29342970 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 29343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 8427720 - 8427818
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||| |||| ||||||  ||||||||||||  |||||| || |||||||    
T  8427720 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgt 8427818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 37374924 - 37374819
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |     ||||||  |||||| ||||||||||     
T  37374924 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttccc-----gggaaaggattaacctttcccatgtg 37374830  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  37374829 aaatgccacca 37374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 32672760 - 32672824
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactt 80  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  32672760 atctagtgttgagagagcatgttaagaatatgttcttcgcttaatctaatcattaaatccaactt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 41875593 - 41875689
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||| ||||||||  ||||||   |||  |||||||||||||||    
T  41875593 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaacccaactttcccatggtaaaaaatgattaacttttcccat 41875689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 47737650 - 47737729
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| || |||||||||||||||| ||| ||||||| |||||||||||| ||  ||||||||||||    
T  47737650 atctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaacattcccatggtgggaaa 47737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 37374583 - 37374681
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||| |||||||||||| ||| ||||||| |||||||||||||||   ||| ||||||||  ||||| ||||||||||    
T  37374583 atctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaaggttaacatttcccatgt 37374681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 49752382 - 49752317
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||| |||||    
T  49752382 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcctacttt 49752317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 55282398 - 55282506
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||| | | |||| ||||||||||||||||||| ||| ||||||| ||| |||||||||||  ||||||||||||  |||||   |||||||||     
T  55282398 atctagtgtcgagggagcatgttaagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaa-acttcccatgtg 55282496  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  55282497 aaatgccacc 55282506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31014443 - 31014371
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgg 91  Q
    |||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||    
T  31014443 tagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 31014371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 19555900 - 19555959
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatcc 75  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||    
T  19555900 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcc 19555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 38575619 - 38575690
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| || |||| |||||||||||||||| ||||    
T  38575619 atctaatgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaacttttccatg 38575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 40887918 - 40887981
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaact 79  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  40887918 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 49752887 - 49752966
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| |||||| ||||| |||||| ||| ||||||| |||||||||||||||  |||||| |||||    
T  49752887 atctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactttcccatggtaggaaa 49752966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 23584346 - 23584248
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||| | ||||||||||||||| ||| ||| ||||||| |||||||| ||||||  ||||||||||||  |||||| | ||||||||    
T  23584346 atctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgt 23584248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 23599169 - 23599071
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||| | ||||||||||||||| ||| ||| ||||||| |||||||| ||||||  ||||||||||||  |||||| | ||||||||    
T  23599169 atctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgt 23599071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 38575130 - 38575065
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||| | |||||||||||||||||||  || ||||||| |||||||||||||||    
T  38575130 atctagtgttgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaacttt 38575065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 43658872 - 43658937
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||| |||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  43658872 atctaatgttgaaagagcctgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 43658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 50675102 - 50675211
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| ||| || |||||| |||||||||||| ||| ||||||| ||||||| |||||||  ||| |||  |||  |||||| ||||||||||     
T  50675102 atctagtgttgagagtgcatgttaataatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtg 50675201  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  50675202 aaatgtcacc 50675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 24221149 - 24221214
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||||| |||||||||| |||||||| ||| || |||| ||| |||||||||||    
T  24221149 atctagtgttgagagagcatgttaagaatgtgttcttcacttaatataatcattaaatccaacttt 24221214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 43103995 - 43103901
Alignment:
Q  29 agagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgcca 123  Q
    ||||| ||||||||||||||| ||| ||| ||| |||  ||||||||||||||   ||||||||||| ||||  ||||| |||||| ||| ||||    
T  43103995 agagcatgttaagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaagaattggctttttccatgtgaaacgcca 43103901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 50674733 - 50674640
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| || ||| |||||||||| | ||| |||||||     |||||||||||  ||||||||||||| |||||| |||| |||||    
T  50674733 atctagtgttgagagagcatgctaaaaatatgttctacacttaatctaat-----aatccaactttcccatggtgggaaaagattaacctttctcatgt 50674640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 8427325 - 8427269
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaa 72  Q
    ||||||||||| |||||| || ||||||||||||||||  || ||||||| ||||||    
T  8427325 atctagtgttgagagagcatgataagaatatgttcttcatttaatctaatcattgaa 8427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 41459204 - 41459141
Alignment:
Q  50 cttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||| ||| ||||||| |||||||| |||||| |||||||||||||  |||||| ||||||||||    
T  41459204 cttcacttaatctaatcattgaatc-aactttctcatggtgggaaaggattaacctttcccatgt 41459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 47737172 - 47737108
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactt 80  Q
    ||||||| ||| |||| | ||||||||||||||||| | ||| |||||||  |||||||||||||    
T  47737172 atctagtattgagagaacatgttaagaatatgttctccacttaatctaatcgttgaatccaactt 47737108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 20244151 - 20244258
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||  |||||| |||||||||| |||    
T  20244151 tagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaa 20244250  T
Q  119 tgccacca 126  Q
    ||||||||    
T  20244251 tgccacca 20244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 9224375 - 9224265
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  9224375 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 9224276  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  9224275 aaatgccacca 9224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 3595355 - 3595257
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  3595355 atctagtgttgagagagcatgttaagaatatgttcttcactttatctaatcattgaatccaactttcccatggtgggaaagaattaacctttcccatgt 3595257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 7583770 - 7583880
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| | ||||| |||||||||||||||  ||| ||||||||| |||||| ||||||||||     
T  7583770 atctagtgttgagagagcatgttaagaatatgttcttcacttaagctaatcattgaatccaactttcccatagtgggaaaagattaacctttcccatgtg 7583869  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  7583870 aaatgccacca 7583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 7716780 - 7716671
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  7716780 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtg 7716681  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  7716680 aaatgccacc 7716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 11256717 - 11256826
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||||||||| |||||| ||| ||||||| ||||||||||||||| ||||||||| |||  |||||| ||| |||||||    
T  11256717 atctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaaatgattaaccttttccatgta 11256816  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  11256817 aaatgccacc 11256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 28223897 - 28223788
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||   |||||||||||  |||||| ||||||||||     
T  28223897 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtg 28223798  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  28223797 aaatgccacc 28223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 4386937 - 4387046
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  4386937 atctagtgttaagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 4387036  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  4387037 aaatgccacc 4387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6849519 - 6849628
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||  |||||| |||||| |||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||| |||||||    
T  6849519 atctagtgttaagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgta 6849618  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  6849619 aaatgccacc 6849628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 16571227 - 16571118
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  16571227 atctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 16571128  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  16571127 aaatggcacc 16571118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 39477302 - 39477398
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||    
T  39477302 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccat 39477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 16903059 - 16903170
Alignment:
Q  9 gaagaatatctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttc 108  Q
    |||||| |||||||||||  ||||| |||||| |||||||| ||| ||| ||||||| ||||||||||||||| ||||||||| |||  |||||| ||||    
T  16903059 gaagaaaatctagtgttgaaagagcatgttaaaaatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttc 16903158  T
Q  109 ccatgtaaaatg 120  Q
    ||||||||||||    
T  16903159 ccatgtaaaatg 16903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 10883396 - 10883298
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||  ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  10883396 atctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 10883298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 11256225 - 11256127
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||| ||||  |||||| ||||||||||    
T  11256225 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgt 11256127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 30162023 - 30161933
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaatgccacc 125  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||| |||||||  |||||||||||||| || ||||||||||    
T  30162023 tgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttcccacgtgaaatgccacc 30161933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 28224368 - 28224463
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  28224368 tagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 28224463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 6849397 - 6849299
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||| |||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  6849397 atctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 6849299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 7583241 - 7583143
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| | | ||||||| ||||||||||| ||| |||||||||||||  |||||| ||||| ||||    
T  7583241 atctagtgttgagagagcatgttaagaatatgttcttcacctaatctaatcattgaatccaattttctcatggtgggaaaggattaacctttccgatgt 7583143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 8113277 - 8113383
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| | | ||||||| || ||||||||||||  |||||||| |||  |||||| ||||||||||     
T  8113277 atctagtgttgagagagcatgttaagaatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaaaggattaacctttcccatgtg 8113376  T
Q  116 aaatgcc 122  Q
    |||||||    
T  8113377 aaatgcc 8113383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 3595872 - 3595981
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||| ||| ||| ||||||| |||||||||||||||| |||| ||  |||  |||||| ||||||||||     
T  3595872 atctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtg 3595971  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  3595972 aaatgtcacc 3595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 16571703 - 16571801
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||| |||  |||| |||||||  |||||| ||||||||||    
T  16571703 atctaatgttgagagagcatgttaagaatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgt 16571801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 16887692 - 16887594
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||| ||||||||||||| |  ||||||||||||  |||||| ||||||||||    
T  16887692 atctagtgttcagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgt 16887594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 33847979 - 33847873
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    |||||||| |||||| ||||||||||||||||||| ||| |||||||| ||||||||| ||||  |||||||| |||  |||  | |||||||||| |||    
T  33847979 tagtgttgagagagcatgttaagaatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaaaggattggcctttcccatgtgaaa 33847880  T
Q  119 tgccacc 125  Q
    |||||||    
T  33847879 tgccacc 33847873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 8963613 - 8963504
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||| |||||||| ||| ||| ||||||| |||||||||||||||  |||| | | |||  |||||| ||||||||||     
T  8963613 atctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtg 8963514  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  8963513 aaatgccacc 8963504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 467214 - 467139
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgg 91  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| || |||| |||||||||||||||  ||||||||    
T  467214 atctagtgttgagagaccatgttaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgg 467139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 467337 - 467412
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttccc 110  Q
    ||||||||||||||||||| ||| || |||||||||||| ||||||||||| ||||| |||  |||||| ||||||    
T  467337 tgttaagaatatgttcttcacttaatttaattattgaattcaactttttcacggtggaaaatgattaacctttccc 467412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 20243662 - 20243583
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||| ||||| |||| | |||||||||||| |||||| ||| ||||||| |||||||||||||||  ||||||||||||    
T  20243662 atctaatgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaa 20243583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 7717262 - 7717359
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| || |||| ||||||| |||||||  ||||||| ||||  |||||| ||||||||||    
T  7717262 atctagtgttgagagaacatgttaagaatatgttcttcacttaatataatcattgaat-caactttcccatggtgagaaaggattaacctttcccatgt 7717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 17918662 - 17918720
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatc 74  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||    
T  17918662 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 40165979 - 40165907
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgg 91  Q
    ||||||||  ||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||  ||||||||    
T  40165979 tagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtgg 40165907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 17918130 - 17918064
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttt 82  Q
    ||||||||||| |||| | |||||||||||| |||||| ||| ||||||| |||||||| |||||||    
T  17918130 atctagtgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatctaactttt 17918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 39476624 - 39476545
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||| | |||||||||||| |||||| ||| ||||||| |||||||  ||||||  ||| ||||||||    
T  39476624 atctagtgttgagagatcatgttaagaatatattcttcacttaatctaatcattgaattaaactttcccatagtgggaaa 39476545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 40166839 - 40166918
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||| |||||||||||  ||| ||||||| ||||||||||| |||  ||||||||||||  |||||| ||||| ||||    
T  40166839 tgttaaaaatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgt 40166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 18949950 - 18949909
Alignment:
Q  84 catggtgggaaaaaattaacttttcccatgtaaaatgccacc 125  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||    
T  18949950 catggtgagaaaagattaacttttcccatgtgaaatgccacc 18949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 8112786 - 8112691
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | |||||| |||||||||    ||| ||||||| |||||||||||||||  ||||||| ||||  |||||| |||| |||||    
T  8112786 atctagtgttgagagaacatgttaaaaatatgttca---cttaatctaatcattgaatccaactttcccatggtgagaaaggattaacatttctcatgt 8112691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 36682944 - 36682835
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  36682944 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtg 36682845  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  36682844 aaatgccacc 36682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 30711897 - 30711799
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  30711897 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaacttttccatggtgggaaaaaattaaccttttccatgt 30711799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 46732676 - 46732567
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||  ||||||||||||||| ||| ||| ||||||| |||||||||||||||| ||| |||||||| ||||||| ||||||||||     
T  46732676 atctagtgttgagagagaatgttaagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaagaattaacctttcccatgtg 46732577  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  46732576 aaatgccacc 46732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 47814080 - 47813971
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||  |||||| |||||||  |     
T  47814080 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccacatg 47813981  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  47813980 aaatgccacc 47813971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 4895059 - 4895165
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||     
T  4895059 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtg 4895158  T
Q  116 aaatgcc 122  Q
    |||||||    
T  4895159 aaatgcc 4895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 46815039 - 46815148
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||| ||||| |||||| |||||||||||||||||||  || ||||||| |||||||||||||||  |||||||||||| ||||||||||| ||||||     
T  46815039 atctaatgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaataattaactttt-ccatgtg 46815137  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  46815138 aaatgccacca 46815148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 27855674 - 27855566
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| || |||||||||||||||| ||| ||||||| ||||||| ||||||| |||||||||||||  |||||| ||||||||||     
T  27855674 atctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaat-caactttctcatggtgggaaatgattaacctttcccatgtg 27855576  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  27855575 aaatgccacc 27855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 36683441 - 36683539
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| |||||| |||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  36683441 atctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 36683539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 42456030 - 42455920
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| || |||| ||||||||||| |||  | ||||||||||  |||||| ||||||||||     
T  42456030 atctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgggaaaggattaacctttcccatgtg 42455931  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  42455930 aaatgccacca 42455920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 47814612 - 47814710
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||  ||||||||||    
T  47814612 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgt 47814710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 22276053 - 22276156
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| |||||| ||||||||||||  || ||||||| |||||||||||||||  ||||||||||||  |||||| |||||||||||    
T  22276053 atctagtgttgaaagagcatgttaaaaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgta 22276152  T
Q  116 aaat 119  Q
    ||||    
T  22276153 aaat 22276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 19816373 - 19816275
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||| | | ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  19816373 atctagtgttgagagagcatgttaagaatatgttttacacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 19816275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 24044020 - 24044118
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||  ||||||  ||||||||||||  |||||| ||||||||||    
T  24044020 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgt 24044118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 34853500 - 34853402
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||  |||||| ||||||||||    
T  34853500 atctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgt 34853402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 34853973 - 34854082
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||| || ||||||   |||||||||||  |||||| ||||||||||     
T  34853973 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtg 34854072  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  34854073 aaatggcacc 34854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 32499849 - 32499936
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaac 103  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  | | |||||||| |||||||    
T  32499849 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccgttgtgggaaagaattaac 32499936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 19816869 - 19816975
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||| |||||||||||| ||| ||||||| ||| |||||||||||  |||||||| |||  |||||| |||||||| |     
T  19816869 atctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatg 19816968  T
Q  116 aaatgcc 122  Q
    |||||||    
T  19816969 aaatgcc 19816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 4894608 - 4894515
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcc 109  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||  |||||| |||||    
T  4894608 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 32499358 - 32499293
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  32499358 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 32499293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 46814514 - 46814413
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||| |||||  ||||| ||||||||||||||||||| ||| |||||||  |||||| |||||||  ||||||||||||  |||||| |||||||||||    
T  46814514 atctaatgttgaaagagcatgttaagaatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgta 46814415  T
Q  116 aa 117  Q
    ||    
T  46814414 aa 46814413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 33806078 - 33806003
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgg 91  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| || |||| |||||||||||||||| ||||||||    
T  33806078 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaacttttccatggtgg 33806003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 22275533 - 22275436
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||  |||||| ||| ||||||    
T  22275533 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaatgattaaccttttccatgt 22275436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 24323959 - 24324056
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||||||||||||||| |||  ||| ||||||||  |||||| ||||||||||    
T  24323959 atctagtgttcagagaacatgttaagaatatgttcttcacttaatctaattattgaatccaa-tttcccatagtgggaaatgattaacctttcccatgt 24324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 42456493 - 42456591
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||| |||||| |||| | |||||| |||||||||||| ||| || |||| |||||||||||||||  ||||||||||||  |||||| ||||||||||    
T  42456493 atcttgtgttgagagaacatgttaaaaatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 42456591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 18520966 - 18520901
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    |||||||||||  ||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  18520966 atctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 18520901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 36620227 - 36620118
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| |||||| |||||||| ||| ||| || |||| ||||||| ||||||| ||||| | | |||| |||||| |||||||| |     
T  36620227 atctagtgttgaaagagcatgttaataatatgtttttcacttaatttaatcattgaattcaactttctcatgatagaaaaagattaacctttcccatatg 36620128  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  36620127 aaatgccacc 36620118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 36620717 - 36620780
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaact 79  Q
    ||||||||||| | |||| |||||| |||||||||||| ||| ||||||| |||||||||||||    
T  36620717 atctagtgttgagtgagcatgttaataatatgttcttcacttaatctaatcattgaatccaact 36620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 46012918 - 46012978
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaa 77  Q
    ||||||||||| |||||| |||||| |||||||||||| ||| ||||||| |||||||||||    
T  46012918 atctagtgttgagagagcatgttaa-aatatgttcttcacttaatctaatcattgaatccaa 46012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 51248460 - 51248556
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||||  ||||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  51248460 atctagtgttgagagagtatgttaagaatatgttcttcacttaatctaattattgaatcaaacttttccatggtgggaaaaaattaacctttcccat 51248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 27816981 - 27817088
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||  |||||| || |||||||     
T  27816981 atctagtgttgagagagcatgttaggaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtg 27817080  T
Q  116 aaatgcca 123  Q
    ||||||||    
T  27817081 aaatgcca 27817088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 49534375 - 49534482
Alignment:
Q  18 ctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaa 117  Q
    ||||||||| |||||| || |||||||||||| ||  ||| ||||||| |||||||||||||||| ||||||||||||  |||||| |||||||||| ||    
T  49534375 ctagtgttgagagagcatgataagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 49534474  T
Q  118 atgccacc 125  Q
    ||||||||    
T  49534475 atgccacc 49534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 6288184 - 6288290
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    ||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||| | ||||||| ||||  |||||| |||||||||| |||    
T  6288184 tagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaaa 6288283  T
Q  119 tgccacc 125  Q
    |||||||    
T  6288284 tgccacc 6288290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 43368812 - 43368910
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||||||||| ||||||| ||||||||||    
T  43368812 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgt 43368910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 1403149 - 1403040
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||| |||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||| ||||||     
T  1403149 atctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtg 1403050  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  1403049 aaatgccacc 1403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 8560265 - 8560156
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| |||||||  ||||||||||| ||  |||||||| |||  |||||| ||||||||||     
T  8560265 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtg 8560166  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  8560165 aaatgccacc 8560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 42839046 - 42838937
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||| || ||||||  ||||||||||||  |||||| ||| ||||||     
T  42839046 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtg 42838947  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  42838946 aaatggcacc 42838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 42839525 - 42839620
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttccca 111  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||  |||||| |||||||    
T  42839525 atctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 49533852 - 49533773
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaa 95  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  | ||||||||||    
T  49533852 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaa 49533773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 8560720 - 8560817
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||||||  ||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||| ||||||||||||  |||||| ||||||||||    
T  8560720 atctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caacttttccatggtgggaaaggattaacctttcccatgt 8560817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 52859765 - 52859863
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||| |||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||| |||||||  |||||| |||||  |||||| ||||||||||    
T  52859765 atctggtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgt 52859863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 27797713 - 27797822
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||| || ||||||  ||| |||| |||  |||||| ||||||||||     
T  27797713 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtg 27797812  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  27797813 aaatggcacc 27797822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 41563288 - 41563192
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||||| ||||||||||| |||||||  || ||||||| |||||||||||||||  |||||| | ||| ||||||| ||||||||    
T  41563288 atctagtgttgagagagcatgttaagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcccat 41563192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 41563769 - 41563833
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactt 80  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  41563769 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 42839807 - 42839712
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||| |||||| ||||||||||||||||||| ||| |||| || ||||| || ||||||  ||||||||||||  |||||| ||||||||||    
T  42839807 tagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgt 42839712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 1403665 - 1403762
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||||||  ||||||||||||  |||||| ||||| ||||    
T  1403665 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaaggattaacctttcctatgt 1403762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 27797226 - 27797128
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||| |||| ||  ||||||||||||  |||||| ||| ||||||    
T  27797226 atctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgt 27797128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 37725488 - 37725422
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttt 82  Q
    ||||||||||| |||||  ||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  37725488 atctagtgttgagagagtatgttaagaatatgttcttcacttaatctaatgattgaatccaactttt 37725422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 48843689 - 48843591
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||| ||| ||| || |||| |||||||||||||||   |||||| ||||| |||||| ||||||||||    
T  48843689 atctagtgttgagagaacatgttaagaatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgt 48843591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 48843939 - 48844004
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  48843939 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 48844004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 27934272 - 27934358
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaac 103  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||| ||||||||||  |||| ||| ||| |||||||    
T  27934272 atctagtgttgagagagcatgttaagaatatgttcttctcttaatctaatcattg-atccaactttcccatgttggaaaagaattaac 27934358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 51247937 - 51247866
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||||||||| |||||| |||||||||||| |||||| ||| ||||||| ||||||||||| |||| ||||    
T  51247937 atctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaatttttccatg 51247866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 7219625 - 7219722
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| ||||||| ||||||||||| |||  |||| |||||||  |||||| ||||||||||    
T  7219625 atctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatgatgggaaaggattaacctttcccatgt 7219722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 7782668 - 7782777
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||| |||||  ||||| || |||||||||||||||| ||| ||| ||| |||||||||||||||  |||||| |||||  |||  | ||||||||||     
T  7782668 atctaatgttgaaagagcatgataagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtg 7782767  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  7782768 aaatgccacc 7782777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 42840290 - 42840391
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| ||||   |||||| |||||||||||| ||| ||||||| ||||||| |||||||  ||| |||| |||  |||||| |||||||||||    
T  42840290 atctagtgttgagagattatgttaaaaatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgta 42840389  T
Q  116 aa 117  Q
    ||    
T  42840390 aa 42840391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 48369591 - 48369526
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||    
T  48369591 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaacttt 48369526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 43368299 - 43368203
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||  |||| | ||||||||||||||||||| ||| || |||| |||||||| ||| ||  ||||||||||||  |||||| ||||||||    
T  43368299 atctagtgttaagagaacatgttaagaatatgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 6287729 - 6287658
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||  | ||||||||||    
T  6287729 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaattaatctttttcatg 6287658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 7219117 - 7219052
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| || ||| |||||||||||| ||||||  || ||||||| |||||||||||||||    
T  7219117 atctagtgttgagaaagcatgttaagaatatattcttcatttaatctaatcattgaatccaacttt 7219052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 11374 - 11266
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  |||||| |||||| |||||| ||||||||||     
T  11374 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggt-ggaaaagattaacctttcccatgtg 11276  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  11275 aaatgccacc 11266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 6032730 - 6032839
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| |||||| |||||||| |||||||||||| ||| |||| |     
T  6032730 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttctcatggtgagaaaaaattaaccttttccatatg 6032829  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  6032830 aaatgccacc 6032839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 5523823 - 5523932
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||| ||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||   |||||||||||| |||||| ||||||||||     
T  5523823 atctagtcttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtg 5523922  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  5523923 aaatgccacc 5523932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 30611322 - 30611431
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||||||||||||||||  || ||||||| |||||||||||||||  ||||||||||||  |||||| |||| |||||     
T  30611322 atctagtgttgagagagcatgttaagaatatgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtg 30611421  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  30611422 aaatgccacc 30611431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 33668330 - 33668221
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| | ||||||||||||||||| ||| || |||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  33668330 atctagtgttgagagagcatattaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtg 33668231  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  33668230 aaatgccacc 33668221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 13936617 - 13936727
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||  ||| ||||||| ||||| || ||||||  ||||||||||||  |||||| ||||||||||     
T  13936617 atctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtg 13936716  T
Q  116 aaatgccacca 126  Q
    ||||| |||||    
T  13936717 aaatggcacca 13936727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 30610820 - 30610723
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatg 113  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||| |||  |||||||| |||  |||||| |||||||||    
T  30610820 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaaatgattaacctttcccatg 30610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12809679 - 12809787
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||   |||||||  |||||| ||||||||||     
T  12809679 atctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtg 12809778  T
Q  116 aaatgccac 124  Q
    |||||||||    
T  12809779 aaatgccac 12809787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 31723941 - 31723833
Alignment:
Q  17 tctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaa 116  Q
    ||||||| || |||||| ||||||||||||||||||| ||| ||||||| ||| ||||||| |||  |||||| |||||  |||||| |||||||| |||    
T  31723941 tctagtgctgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccatataa 31723842  T
Q  117 aatgccacc 125  Q
    |||||||||    
T  31723841 aatgccacc 31723833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 5523309 - 5523211
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||   ||||||| |||  |||||| ||||||||||    
T  5523309 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgt 5523211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 6032267 - 6032169
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||| ||| |||| | ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||| ||||||||  |||||| ||||||||||    
T  6032267 atctagtcttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgt 6032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 12809178 - 12809080
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| |||| ||||||||||   || ||||||||  |||||| ||||||||||    
T  12809178 atctagtgttgagagaacttgttaagaatatgttcttcacttaatctaatcattgcatccaactttcctatagtgggaaaggattaacctttcccatgt 12809080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 13944399 - 13944303
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccat 112  Q
    ||||||||||| |||| | |||||||||||||||||||  || ||||||| ||||||| |||||||  |||| |||||||  |||||  ||||||||    
T  13944399 atctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcccat 13944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 33668826 - 33668905
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||| ||||| |||||| ||| ||||||| ||||||||||||||||  |||||||||||  |||||| ||||| ||||    
T  33668826 tgttaaaaatatattcttcacttaatctaatcattgaatccaacttttctatggtgggaaatgattaacatttccaatgt 33668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 3957609 - 3957499
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||| | | ||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||||||||||     
T  3957609 atctagtgttgagagaacatattaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtg 3957510  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  3957509 aaatgccacca 3957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 5324383 - 5324489
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||  |||| ||||||| |||||||||| |||    
T  5324383 tagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaaa 5324482  T
Q  119 tgccacc 125  Q
    || ||||    
T  5324483 tgtcacc 5324489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 4928980 - 4928882
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||| | ||||||||||||||||||| ||| ||||||| ||| ||||||||||||  |||||||||||  |||||||||||||||||    
T  4928980 atctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgt 4928882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 4929483 - 4929593
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||| ||||| |||||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||||||||||     
T  4929483 atctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtg 4929582  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  4929583 aaatgccacca 4929593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 33430151 - 33430042
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||| ||| |||||| |||||  |||||| ||| ||||||     
T  33430151 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac-tttccatggtaggaaaggattaaccttttccatgtg 33430053  T
Q  116 aaatgccacca 126  Q
    |||||||||||    
T  33430052 aaatgccacca 33430042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 3739640 - 3739738
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||||| |||| || |||||  ||||| |||||| ||||    
T  3739640 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatagtaggaaaggattaagttttcctatgt 3739738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 42408542 - 42408613
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatg 87  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  42408542 atctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 42408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 8813660 - 8813769
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||| | |||||| ||||||||||||||||||  ||| ||||||| |||||||||||||||  |||| ||| |||  |||||| |||||||| |     
T  8813660 atctagtgtagagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatg 8813759  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  8813760 aaatgccacc 8813769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 28075946 - 28076055
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||||||| |||||| |||||||||||| || ||| ||| ||||||| |||||||||||||||  |||||||| |||  |||||| ||| ||||||     
T  28075946 atctagtgttgagagagcatgttaagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtg 28076045  T
Q  116 aaatgccacc 125  Q
    ||||| ||||    
T  28076046 aaatgtcacc 28076055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 26687609 - 26687511
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  |||||| | |||  |||||| ||||||||||    
T  26687609 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgt 26687511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 26957340 - 26957242
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||  |||||| | |||  |||||| ||||||||||    
T  26957340 atctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgt 26957242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 3958114 - 3958209
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    |||||||| |||||  |||||| |||||||||||| ||| |||||||||||||||| ||||||    || |||||||  |||||| ||||||||||    
T  3958114 tagtgttgagagagtatgttaaaaatatgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgt 3958209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 26688034 - 26688092
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatc 74  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| || |||| ||||||||    
T  26688034 atctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26688092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 26957765 - 26957823
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatc 74  Q
    ||||||||||| |||||| ||||||||||||||||||| ||| || |||| ||||||||    
T  26957765 atctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 3739109 - 3739044
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaacttt 81  Q
    ||||||||||| |||||  |||||||||||| || ||| ||| ||||||| |||||||||||||||    
T  3739109 atctagtgttgagagagtatgttaagaatatatttttcacttaatctaatcattgaatccaacttt 3739044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 21770101 - 21770045
Alignment:
Q  22 tgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaac 78  Q
    ||||| |||| | ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  21770101 tgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 21770045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 42408082 - 42408014
Alignment:
Q  35 tgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaac 103  Q
    |||||||||||||||||||  || ||||||| ||||||||||| |||  ||| ||||||||| ||||||    
T  42408082 tgttaagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaaagattaac 42408014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 21770527 - 21770490
Alignment:
Q  76 aactttttcatggtgggaaaaaattaacttttcccatg 113  Q
    |||||||||||||||||||| || ||||||||||||||    
T  21770527 aactttttcatggtgggaaacaactaacttttcccatg 21770490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 15210 - 15319
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgta 115  Q
    ||||||| |||  ||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||  ||||||||||||  |||||| ||| ||||||     
T  15210 atctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtg 15309  T
Q  116 aaatgccacc 125  Q
    ||||||||||    
T  15310 aaatgccacc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 1594 - 1496
Alignment:
Q  16 atctagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgt 114  Q
    ||||||||||| |||||| || |||||||||||| ||| ||| ||||||| |||||||||||||||| ||||||| ||||  |||||  ||||||||||    
T  1594 atctagtgttgagagagcatgctaagaatatgttattcacttaatctaatcattgaatccaacttttccatggtgcgaaatgattaagctttcccatgt 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 11764 - 11870
Alignment:
Q  19 tagtgttgggagagcgtgttaagaatatgttcttcgcttcatctaattattgaatccaactttttcatggtgggaaaaaattaacttttcccatgtaaaa 118  Q
    |||||||| |||||| ||||||||||||||||||| ||| |||| || ||||| || ||||||  ||||||||||||  |||||| ||| |||||| |||    
T  11764 tagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaa 11863  T
Q  119 tgccacc 125  Q
    || ||||    
T  11864 tggcacc 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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