View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1383_low_4 (Length: 611)

Name: NF1383_low_4
Description: NF1383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1383_low_4
NF1383_low_4
[»] chr5 (10 HSPs)
chr5 (170-583)||(13103578-13103985)
chr5 (170-583)||(13033605-13034012)
chr5 (6-80)||(13032848-13032923)
chr5 (6-134)||(13102821-13102950)
chr5 (133-164)||(35547260-35547291)
chr5 (137-167)||(22657764-22657794)
chr5 (138-167)||(3028009-3028038)
chr5 (137-165)||(14571285-14571313)
chr5 (138-166)||(23260150-23260178)
chr5 (138-166)||(39971011-39971039)
[»] chr3 (5 HSPs)
chr3 (133-166)||(23776501-23776534)
chr3 (138-167)||(50433401-50433430)
chr3 (138-166)||(17589888-17589916)
chr3 (138-166)||(28875263-28875291)
chr3 (55-87)||(31230487-31230519)
[»] chr4 (4 HSPs)
chr4 (136-167)||(6462700-6462731)
chr4 (137-167)||(3085441-3085471)
chr4 (138-167)||(46949988-46950017)
chr4 (138-166)||(4415962-4415990)
[»] chr1 (4 HSPs)
chr1 (133-167)||(44455629-44455663)
chr1 (138-166)||(9413337-9413365)
chr1 (137-165)||(22567064-22567092)
chr1 (138-166)||(25509206-25509234)
[»] chr8 (6 HSPs)
chr8 (55-88)||(1513573-1513606)
chr8 (137-166)||(5784159-5784188)
chr8 (138-167)||(12802607-12802636)
chr8 (138-166)||(23487061-23487089)
chr8 (133-169)||(33980459-33980495)
chr8 (136-164)||(44748473-44748501)
[»] chr7 (4 HSPs)
chr7 (138-167)||(2290028-2290057)
chr7 (138-166)||(6799558-6799586)
chr7 (137-165)||(7400127-7400155)
chr7 (137-165)||(30895558-30895586)
[»] chr2 (2 HSPs)
chr2 (137-166)||(6027615-6027644)
chr2 (138-166)||(31751066-31751094)
[»] chr6 (2 HSPs)
chr6 (138-166)||(402633-402661)
chr6 (137-165)||(9341836-9341864)


Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 170 - 583
Target Start/End: Original strand, 13103578 - 13103985
Alignment:
Q  170 gaaaaacacaaacttttttcccatagt-ggcaatattattatctgggtaaagtgnnnnnnnttgtcattgggattaacattagtaactggcaaatagagg 268  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  13103578 gaaaaacacaaacttttttcc-atagttggcaatattattatctgggtaaagtgaaaaaagttgtcattgggattaacattagtaactggcaaatagagg 13103676  T
Q  269 tcattaactagagtaagtaaaggtataagtcaacccttttgtcttggaattgtacatcactatcctattcccacgttatggtcaccaccgacccatgcaa 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13103677 tcattaactagagtaagtaaaggtataagtcaacccttttgtcttggaattgtacatcactatcctattcccacgttatggtcaccaccgacccatgcaa 13103776  T
Q  369 acaaatcttgacctaaaaatgttcnnnnnnntcacattcatttcnnnnnnnnnngctatgcacgatcatagtttaccttaccccatgaatcatgattcat 468  Q
    ||||||||||||||||||||||||       ||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  13103777 acaaatcttgacctaaaaatgttcaaaaaaatcacattcattt-----tcttttgctatgcacgatcatagtttaccttaccccatgaatcatgattcat 13103871  T
Q  469 ccctttcgccttaatcttcgtcagnnnnnnnnnnnnccactaagcaaaaaaccatgtcaaggattatgattttgattctttcctcaatatttttatttaa 568  Q
    ||||||||||||||||||||||||            ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  13103872 ccctttcgccttaatcttcgtcagtttttcttttttccactaaacaaaaaaccatgtcaaggattatgattctgattctttcctcaata-ttttatttaa 13103970  T
Q  569 cttagggtaataaat 583  Q
    |||||||||||||||    
T  13103971 cttagggtaataaat 13103985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 170 - 583
Target Start/End: Original strand, 13033605 - 13034012
Alignment:
Q  170 gaaaaacacaaacttttttcccatagt-ggcaatattattatctgggtaaagtgnnnnnnnttgtcattgggattaacattagtaactggcaaatagagg 268  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  13033605 gaaaaacacaaacttttttcc-atagttggcaatattattatccgggtaaagtgaaaaaaattgtcattgggattaacattagtaactggcaaatagagg 13033703  T
Q  269 tcattaactagagtaagtaaaggtataagtcaacccttttgtcttggaattgtacatcactatcctattcccacgttatggtcaccaccgacccatgcaa 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13033704 tcattaactagagtaagtaaaggtataagtcaacccttttgtcttggaattgtacatcactatcctattcccacgttatggtcaccaccgacccatgcaa 13033803  T
Q  369 acaaatcttgacctaaaaatgttcnnnnnnntcacattcatttcnnnnnnnnnngctatgcacgatcatagtttaccttaccccatgaatcatgattcat 468  Q
    ||||||||||||||||||||||||       ||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  13033804 acaaatcttgacctaaaaatgttcaaaaaaatcacattcattt-----tcttttgctatgcacgatcatagtttaccttaccccatgaatcatgattcat 13033898  T
Q  469 ccctttcgccttaatcttcgtcagnnnnnnnnnnnnccactaagcaaaaaaccatgtcaaggattatgattttgattctttcctcaatatttttatttaa 568  Q
    ||||||||||||||||||||||||            ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  13033899 ccctttcgccttaatcttcgtcagtttttcttttttccactaaacaaaaaaccatgtcaaggattatgattctgattctttcctcaata-ttttatttaa 13033997  T
Q  569 cttagggtaataaat 583  Q
    |||||||||||||||    
T  13033998 cttagggtaataaat 13034012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 13032848 - 13032923
Alignment:
Q  6 gtagataattctgcagtctgatgaaagttatttcaccatcattaac-acgtacttcctccgtcctaaattatatgt 80  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||| |||||    
T  13032848 gtagataattttgcagtctgatgaaaattatttcaccatcattaacggcgtactccctccgtcctaaattgtatgt 13032923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 13102821 - 13102950
Alignment:
Q  6 gtagataattctgcagtctgatgaaagttatttcaccatcattaaca-cgtacttcctccgtcctaaattatatgtcgttttagaagnnnnnnnttgttc 104  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| | |||| | ||||||||||||||| ||||| | ||||| |        ||||||    
T  13102821 gtagataattctgcagtctgatgaaaattatttcaccattattaagagcgtattccctccgtcctaaattgtatgttgctttaggaaagaaaaattgttc 13102920  T
Q  105 caaattatatatcattttacaatacattaa 134  Q
    |||||||||| ||  ||||||||| |||||    
T  13102921 caaattatatgtcgctttacaatatattaa 13102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 164
Target Start/End: Complemental strand, 35547291 - 35547260
Alignment:
Q  133 aaaaatcttataattagggacggaggtagtat 164  Q
    ||||||||||||||||||||||||||||||||    
T  35547291 aaaaatcttataattagggacggaggtagtat 35547260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 167
Target Start/End: Complemental strand, 22657794 - 22657764
Alignment:
Q  137 atcttataattagggacggaggtagtataaa 167  Q
    |||||||||||||||||||||||||||||||    
T  22657794 atcttataattagggacggaggtagtataaa 22657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 3028038 - 3028009
Alignment:
Q  138 tcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||    
T  3028038 tcttataattagggacggaggtagtataaa 3028009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 14571313 - 14571285
Alignment:
Q  137 atcttataattagggacggaggtagtata 165  Q
    |||||||||||||||||||||||||||||    
T  14571313 atcttataattagggacggaggtagtata 14571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 23260150 - 23260178
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  23260150 tcttataattagggacggaggtagtataa 23260178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 39971039 - 39971011
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  39971039 tcttataattagggacggaggtagtataa 39971011  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 166
Target Start/End: Original strand, 23776501 - 23776534
Alignment:
Q  133 aaaaatcttataattagggacggaggtagtataa 166  Q
    ||||||||||||||||||||||||||||||||||    
T  23776501 aaaaatcttataattagggacggaggtagtataa 23776534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 50433401 - 50433430
Alignment:
Q  138 tcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||    
T  50433401 tcttataattagggacggaggtagtataaa 50433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 17589888 - 17589916
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  17589888 tcttataattagggacggaggtagtataa 17589916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 28875263 - 28875291
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  28875263 tcttataattagggacggaggtagtataa 28875291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 31230519 - 31230487
Alignment:
Q  55 tacttcctccgtcctaaattatatgtcgtttta 87  Q
    ||||||||||||| |||||||||||||||||||    
T  31230519 tacttcctccgtcttaaattatatgtcgtttta 31230487  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 167
Target Start/End: Original strand, 6462700 - 6462731
Alignment:
Q  136 aatcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||||    
T  6462700 aatcttataattagggacggaggtagtataaa 6462731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 167
Target Start/End: Complemental strand, 3085471 - 3085441
Alignment:
Q  137 atcttataattagggacggaggtagtataaa 167  Q
    |||||||||||||||||||||||||||||||    
T  3085471 atcttataattagggacggaggtagtataaa 3085441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 46950017 - 46949988
Alignment:
Q  138 tcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||    
T  46950017 tcttataattagggacggaggtagtataaa 46949988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 4415990 - 4415962
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  4415990 tcttataattagggacggaggtagtataa 4415962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 167
Target Start/End: Original strand, 44455629 - 44455663
Alignment:
Q  133 aaaaatcttataattagggacggaggtagtataaa 167  Q
    |||||||||||||||||| ||||||||||||||||    
T  44455629 aaaaatcttataattaggaacggaggtagtataaa 44455663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 9413337 - 9413365
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  9413337 tcttataattagggacggaggtagtataa 9413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 22567092 - 22567064
Alignment:
Q  137 atcttataattagggacggaggtagtata 165  Q
    |||||||||||||||||||||||||||||    
T  22567092 atcttataattagggacggaggtagtata 22567064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 25509234 - 25509206
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  25509234 tcttataattagggacggaggtagtataa 25509206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 30; Significance: 0.0000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 1513606 - 1513573
Alignment:
Q  55 tacttcctccgtcctaaattatatgtcgttttag 88  Q
    |||| |||||||||||||||||||||||||||||    
T  1513606 tactccctccgtcctaaattatatgtcgttttag 1513573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 5784159 - 5784188
Alignment:
Q  137 atcttataattagggacggaggtagtataa 166  Q
    ||||||||||||||||||||||||||||||    
T  5784159 atcttataattagggacggaggtagtataa 5784188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 12802636 - 12802607
Alignment:
Q  138 tcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||    
T  12802636 tcttataattagggacggaggtagtataaa 12802607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 23487089 - 23487061
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  23487089 tcttataattagggacggaggtagtataa 23487061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 33980495 - 33980459
Alignment:
Q  133 aaaaatcttataattagggacggaggtagtataaagt 169  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  33980495 aaaagtcttataattagggacggaggtagtattaagt 33980459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 44748473 - 44748501
Alignment:
Q  136 aatcttataattagggacggaggtagtat 164  Q
    |||||||||||||||||||||||||||||    
T  44748473 aatcttataattagggacggaggtagtat 44748501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 2290028 - 2290057
Alignment:
Q  138 tcttataattagggacggaggtagtataaa 167  Q
    ||||||||||||||||||||||||||||||    
T  2290028 tcttataattagggacggaggtagtataaa 2290057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 6799558 - 6799586
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  6799558 tcttataattagggacggaggtagtataa 6799586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 7400155 - 7400127
Alignment:
Q  137 atcttataattagggacggaggtagtata 165  Q
    |||||||||||||||||||||||||||||    
T  7400155 atcttataattagggacggaggtagtata 7400127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 30895586 - 30895558
Alignment:
Q  137 atcttataattagggacggaggtagtata 165  Q
    |||||||||||||||||||||||||||||    
T  30895586 atcttataattagggacggaggtagtata 30895558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 166
Target Start/End: Complemental strand, 6027644 - 6027615
Alignment:
Q  137 atcttataattagggacggaggtagtataa 166  Q
    ||||||||||||||||||||||||||||||    
T  6027644 atcttataattagggacggaggtagtataa 6027615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 31751094 - 31751066
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  31751094 tcttataattagggacggaggtagtataa 31751066  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 402633 - 402661
Alignment:
Q  138 tcttataattagggacggaggtagtataa 166  Q
    |||||||||||||||||||||||||||||    
T  402633 tcttataattagggacggaggtagtataa 402661  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 9341864 - 9341836
Alignment:
Q  137 atcttataattagggacggaggtagtata 165  Q
    |||||||||||||||||||||||||||||    
T  9341864 atcttataattagggacggaggtagtata 9341836  T

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