View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13841_high_30 (Length: 228)
Name: NF13841_high_30
Description: NF13841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13841_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 2672388 - 2672192
Alignment:
| Q |
1 |
tatatttaccataaagagccttaatgttgttatttatattatcacttttgacatttactgttttgtttaagcagataaatggatgattcatcgattactg |
100 |
Q |
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| T |
2672388 |
tatatttaccataaagagccttaatgttgttatttatattatcacttttgacatttactgttttgtctaaacagataaatggatgattcatcgattactg |
2672289 |
T |
|
| Q |
101 |
catcttcagtatacggttcgtctagtcagacaaagaaaagaaagactttcaaccaacaatgtctt-gcctacgacgatccatgaaggaagagttgaa |
196 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |
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| T |
2672288 |
catcttcactatacggttcgtctagtcagacaaagaaaagaaagactttcaaccaacaatgtattagcctacgacaatccatgaaggaagagttgaa |
2672192 |
T |
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