View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13841_low_11 (Length: 387)
Name: NF13841_low_11
Description: NF13841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13841_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 7095457 - 7095838
Alignment:
| Q |
1 |
gtcactaatcaatccttcttctctgtgttttttgtttctttgtccccacatttccatacaacacccccttagttgcatgatattcagttagggacacttc |
100 |
Q |
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| T |
7095457 |
gtcactaatcaatccttcttctctgtgttttttgtttctttgtccccacatttccatacaacacccccttagctgcatgatattcagttagggacacttc |
7095556 |
T |
|
| Q |
101 |
ttttcatcaaccaattttaagaatatgtgtgtggcttgaaagggaacttgaatccctcatcttttttaaggatgtgattggagaaaataattttatagag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7095557 |
ttttcatcaaccaattttaagaatatgtgtgtggcttgaaagggaacttgaatccctcatcttttttaaggatgtgattggagaaaataattttatagag |
7095656 |
T |
|
| Q |
201 |
gacctggtccttatgatgatttttagttagtttgtctttgataagagatttctagttggctaatgacttcttttttccgaggacatgtattaagtgattg |
300 |
Q |
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||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
7095657 |
gacctggtccttatgatgatttttagttagtttttctttgacaagagatttctagttggctaatgtcttcttttttccgaggacatgtattaagtgattg |
7095756 |
T |
|
| Q |
301 |
tactttatgatttgggttggtctggtgatgtttgagcctttagagtatgtttcttttaagatctcagatgcgattctctctg |
382 |
Q |
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| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
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| T |
7095757 |
tgctttatgacttgggttgatctggtgatgtttgagcctttagagtgtgtttcttttaagatctcagattcgattctctctg |
7095838 |
T |
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