View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13841_low_24 (Length: 261)
Name: NF13841_low_24
Description: NF13841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13841_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 27643436 - 27643672
Alignment:
| Q |
9 |
caagaatataaagagagaaggcacaaacaaagaccttctatacaacaaaatattaaatacattactcaatttcacaactctgttttctttcattgtttca |
108 |
Q |
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| T |
27643436 |
caagaaaataaagagagaaggcacaaacaaagaccttctatacaacaaaatattaaatacattactcaatttcacaactctgttttctttcattgtttca |
27643535 |
T |
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| Q |
109 |
ttcgatggccattaacaaatattaaatagtagagcctgcacctgttgtgcatgcaacaagttccaactacaaaaccaaagagaaaatgtggttaagctca |
208 |
Q |
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| T |
27643536 |
ttcgatggccattaacaaatattaaatagtagagcctgcacctgttgtgcatgcaacaagttccaactacaaaaccaaagagaaaatgtggttaagctca |
27643635 |
T |
|
| Q |
209 |
aacaattagatcgatggatttaaatagtgtttgtggt |
245 |
Q |
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| T |
27643636 |
aacaattagatcgatggatttaaatagtgtttgtggt |
27643672 |
T |
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