View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13842_high_21 (Length: 235)
Name: NF13842_high_21
Description: NF13842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13842_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 32915920 - 32916139
Alignment:
| Q |
15 |
agtttttgttccgactgaaagaggttatggcacgaggcttaatcctgttatcatcgccaacatcactctctgcaaacactctactatcttccttctccaa |
114 |
Q |
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| T |
32915920 |
agtttttgttccgactgaaagaggttatggcacgaggcttaatcctgttatcatcgccaacatcactctctgcaaacactctactatcttccttctccaa |
32916019 |
T |
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| Q |
115 |
aaacccatcaacaagtttcaaactttcaccgttttctcaccttttacaccttcaaaaaccttcctctgtttcatcaccatgttgtttcacagtgtgttcc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32916020 |
aaacccatcaacaagtttcaaactttcaccgttttctcaccttttacaccttcaaaaaccttcctctgtttcatcaccatgttgtttcacagtgtgttcc |
32916119 |
T |
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| Q |
215 |
tcttcttctccttcttctca |
234 |
Q |
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|||||||||||||||||||| |
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| T |
32916120 |
tcttcttctccttcttctca |
32916139 |
T |
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