View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13842_low_14 (Length: 349)
Name: NF13842_low_14
Description: NF13842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13842_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 43535772 - 43536088
Alignment:
| Q |
19 |
attctacttttcactatttactagttaaactctttagaagaagaagaaaaaatcaaacctagtgagataaggtttggactaagaaattaatgtttaaata |
118 |
Q |
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| T |
43535772 |
attctacttttcactatttactagttaaactctttagaagaagaagaaaaaatcaaacctagtgagataaggtttggactaagaaattaatgtttaaata |
43535871 |
T |
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| Q |
119 |
tcaataaatatttctattccattttctaacacttttgcatcatgatcagataaaaagttacatatttttactctaaaaaggggttgcatacaatattttg |
218 |
Q |
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| T |
43535872 |
tcaataaatatttatattccattttctaacacttttgcatcatgatcagataaaaagttacatatttttactctaaaaaggggttgcatacaatattttg |
43535971 |
T |
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| Q |
219 |
aaacaattgcatgttaatattgagtttattgagcactcaccaaccgtgtaaagtagttttagactgttatctaataaaatcaatcaatttaccatgtcat |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43535972 |
aaacaattgcatgttaatattgagtttattgagcactca-caaccgtgtaaagtagttttagactgttatctaataaaatcaatcaatttaccatgtcat |
43536070 |
T |
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| Q |
319 |
gcaaataaatgtggaaga |
336 |
Q |
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|||||||||||||||||| |
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| T |
43536071 |
gcaaataaatgtggaaga |
43536088 |
T |
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