View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13842_low_17 (Length: 273)
Name: NF13842_low_17
Description: NF13842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13842_low_17 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 32915883 - 32916139
Alignment:
| Q |
16 |
gttacttggtcgtgtgtttgatgatgtaatgtgaagtagtttttgttccgactgaaagaggttatggcacgaggcttaatcctgttatcatcgccaacat |
115 |
Q |
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| T |
32915883 |
gttacttggtcgtgtgtttgatgatgtaatgtgaagtagtttttgttccgactgaaagaggttatggcacgaggcttaatcctgttatcatcgccaacat |
32915982 |
T |
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| Q |
116 |
cactctctgcaaacactctactatcttccttctccaaaaacccatcaacaagtttcaaactttcaccgttttctcaccttttacaccttcaaaaaccttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32915983 |
cactctctgcaaacactctactatcttccttctccaaaaacccatcaacaagtttcaaactttcaccgttttctcaccttttacaccttcaaaaaccttc |
32916082 |
T |
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| Q |
216 |
ctctgtttcatcaccatgttgtttcacagtgtgttcctcttcttctccttcttctca |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32916083 |
ctctgtttcatcaccatgttgtttcacagtgtgttcctcttcttctccttcttctca |
32916139 |
T |
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