View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13847_low_2 (Length: 357)
Name: NF13847_low_2
Description: NF13847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13847_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 16085502 - 16085165
Alignment:
| Q |
1 |
aagccatattaaaaagatgcagaatatatgagctacaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaacaa |
100 |
Q |
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| T |
16085502 |
aagccatattaaaaagatgcagaatatatgagcttcaaatgatatcttcataaagaccaaattgaaacaaaacatgcatccaccaacaacagtaaaacaa |
16085403 |
T |
|
| Q |
101 |
gcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccacgatgatccctagcacttaaactactactaccaatgaaacaaaa |
200 |
Q |
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| T |
16085402 |
gcaataaataaaactgaatgaaactaatactaataaagacatttacatagctcccatgatgatccctagcacttaaactactactaccaatgaaacaaaa |
16085303 |
T |
|
| Q |
201 |
ttaagatttaacagaaatgttatttgaattttattcatcaaccatgtacgggaattgtggtaaaatgcggaatatgtggtcgatattgccattgtgatat |
300 |
Q |
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| T |
16085302 |
ttaagatttaacagaaatgttatttgaattttattcatcaaccatgtacgggaattgtggtaaaatgcggaaaatgtggtcgatattgccgttgtgatat |
16085203 |
T |
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| Q |
301 |
tgttgcaaacacctctgaaaccaagttacactctgaag |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
16085202 |
tgttgcaaacacctctgaaaccaagttacactctgaag |
16085165 |
T |
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