View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13849_low_11 (Length: 510)

Name: NF13849_low_11
Description: NF13849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13849_low_11
NF13849_low_11
[»] scaffold0236 (2 HSPs)
scaffold0236 (181-498)||(19956-20272)
scaffold0236 (19-51)||(20541-20573)
[»] chr8 (48 HSPs)
chr8 (53-180)||(40098777-40098906)
chr8 (68-179)||(14381233-14381346)
chr8 (53-179)||(9056038-9056166)
chr8 (68-179)||(7377549-7377662)
chr8 (80-169)||(26014574-26014665)
chr8 (79-176)||(11692046-11692144)
chr8 (71-173)||(29451762-29451869)
chr8 (57-138)||(13211277-13211358)
chr8 (79-138)||(13228913-13228972)
chr8 (192-302)||(44814057-44814165)
chr8 (57-139)||(15285674-15285756)
chr8 (57-139)||(15466043-15466125)
chr8 (93-177)||(33574845-33574930)
chr8 (57-130)||(37716120-37716193)
chr8 (213-302)||(42631687-42631776)
chr8 (68-184)||(40098750-40098868)
chr8 (68-179)||(14381270-14381383)
chr8 (192-302)||(34496889-34496999)
chr8 (53-180)||(9056015-9056144)
chr8 (79-181)||(31505031-31505135)
chr8 (56-138)||(9808394-9808474)
chr8 (53-107)||(1739634-1739688)
chr8 (115-179)||(1739644-1739710)
chr8 (370-410)||(10467136-10467176)
chr8 (102-180)||(11295658-11295738)
chr8 (79-135)||(27781925-27781981)
chr8 (149-181)||(31810449-31810481)
chr8 (79-135)||(41178001-41178057)
chr8 (79-135)||(42149169-42149225)
chr8 (79-135)||(42631822-42631878)
chr8 (149-180)||(31505153-31505184)
chr8 (213-284)||(41061227-41061298)
chr8 (149-179)||(1744227-1744257)
chr8 (53-135)||(10117011-10117093)
chr8 (149-179)||(24053592-24053622)
chr8 (53-135)||(24053614-24053696)
chr8 (102-135)||(7258651-7258684)
chr8 (121-180)||(13228864-13228925)
chr8 (81-134)||(13271735-13271788)
chr8 (149-182)||(13496427-13496460)
chr8 (79-135)||(3611810-3611866)
chr8 (79-135)||(3611812-3611868)
chr8 (79-135)||(8568861-8568917)
chr8 (79-135)||(8568863-8568919)
chr8 (225-281)||(14955259-14955315)
chr8 (79-135)||(34326288-34326344)
chr8 (79-135)||(38883989-38884045)
chr8 (79-135)||(39655458-39655514)
[»] chr5 (69 HSPs)
chr5 (53-180)||(3851357-3851486)
chr5 (53-179)||(37944597-37944725)
chr5 (53-176)||(42013820-42013945)
chr5 (57-179)||(13311170-13311293)
chr5 (53-180)||(23914835-23914964)
chr5 (53-179)||(15712138-15712266)
chr5 (53-179)||(19531318-19531446)
chr5 (53-170)||(11262332-11262451)
chr5 (79-179)||(8961214-8961316)
chr5 (68-180)||(26300105-26300219)
chr5 (424-498)||(31706356-31706430)
chr5 (53-179)||(38835542-38835671)
chr5 (79-180)||(13157327-13157430)
chr5 (53-128)||(43446876-43446951)
chr5 (68-167)||(37870024-37870125)
chr5 (79-134)||(21945423-21945478)
chr5 (203-301)||(15965795-15965893)
chr5 (82-172)||(35969175-35969267)
chr5 (53-182)||(19531293-19531424)
chr5 (79-135)||(35172473-35172529)
chr5 (203-281)||(4462577-4462655)
chr5 (79-179)||(5259428-5259530)
chr5 (68-169)||(13157365-13157467)
chr5 (102-181)||(11795729-11795810)
chr5 (79-135)||(15965997-15966053)
chr5 (79-135)||(21152631-21152687)
chr5 (79-135)||(21159766-21159822)
chr5 (79-135)||(21163573-21163629)
chr5 (53-179)||(42013839-42013967)
chr5 (68-180)||(3851395-3851509)
chr5 (68-168)||(20518203-20518305)
chr5 (113-180)||(35969122-35969192)
chr5 (203-252)||(1352387-1352436)
chr5 (82-135)||(14416447-14416500)
chr5 (216-289)||(19366984-19367056)
chr5 (53-180)||(26300128-26300257)
chr5 (79-135)||(7336896-7336952)
chr5 (79-135)||(14064851-14064907)
chr5 (114-180)||(15712115-15712183)
chr5 (192-283)||(1355380-1355471)
chr5 (149-180)||(5259379-5259410)
chr5 (149-180)||(6763812-6763843)
chr5 (149-180)||(23914956-23914987)
chr5 (149-180)||(41180328-41180359)
chr5 (149-179)||(1996842-1996872)
chr5 (149-179)||(1996963-1996993)
chr5 (79-179)||(14153364-14153466)
chr5 (150-180)||(20019864-20019894)
chr5 (53-181)||(25408536-25408666)
chr5 (53-135)||(25408560-25408642)
chr5 (149-179)||(25772149-25772179)
chr5 (150-180)||(25772271-25772301)
chr5 (79-179)||(26141750-26141852)
chr5 (149-179)||(26141870-26141900)
chr5 (79-137)||(26168227-26168285)
chr5 (149-179)||(27314470-27314500)
chr5 (203-289)||(38370534-38370620)
chr5 (203-280)||(9515541-9515617)
chr5 (82-135)||(22565642-22565695)
chr5 (194-280)||(36302158-36302246)
chr5 (115-180)||(13311253-13311320)
chr5 (79-135)||(14571049-14571105)
chr5 (79-135)||(15965999-15966055)
chr5 (79-135)||(15966684-15966740)
chr5 (79-135)||(15966686-15966742)
chr5 (79-135)||(18942029-18942085)
chr5 (79-135)||(30893819-30893875)
chr5 (79-135)||(38860841-38860897)
chr5 (79-135)||(38860843-38860899)
[»] chr1 (93 HSPs)
chr1 (68-180)||(40262500-40262612)
chr1 (68-180)||(6065493-6065607)
chr1 (53-181)||(37734790-37734920)
chr1 (53-179)||(8257960-8258088)
chr1 (53-180)||(48022589-48022718)
chr1 (53-179)||(639794-639922)
chr1 (79-180)||(33604034-33604137)
chr1 (68-180)||(31008253-31008367)
chr1 (69-179)||(27206754-27206866)
chr1 (79-179)||(5856400-5856502)
chr1 (53-179)||(3384240-3384368)
chr1 (53-134)||(35367520-35367601)
chr1 (203-301)||(25129864-25129962)
chr1 (68-179)||(4602676-4602789)
chr1 (56-179)||(15439882-15440007)
chr1 (192-308)||(1609708-1609823)
chr1 (68-138)||(2349788-2349858)
chr1 (53-139)||(34658403-34658489)
chr1 (53-134)||(14418099-14418180)
chr1 (53-179)||(4060166-4060294)
chr1 (68-180)||(2352927-2353041)
chr1 (192-308)||(36995238-36995355)
chr1 (105-183)||(17490479-17490559)
chr1 (79-180)||(39216146-39216245)
chr1 (53-180)||(45115187-45115316)
chr1 (79-184)||(6283525-6283632)
chr1 (115-180)||(31008338-31008405)
chr1 (112-180)||(23944031-23944101)
chr1 (120-180)||(27206843-27206905)
chr1 (192-289)||(2748566-2748663)
chr1 (68-179)||(3384218-3384331)
chr1 (53-179)||(34953891-34954019)
chr1 (114-180)||(6065455-6065523)
chr1 (53-179)||(8257938-8258066)
chr1 (203-297)||(8472364-8472455)
chr1 (79-135)||(31909790-31909846)
chr1 (79-135)||(52253581-52253637)
chr1 (114-179)||(35367556-35367623)
chr1 (79-180)||(36040189-36040292)
chr1 (79-179)||(1035930-1036032)
chr1 (424-466)||(15259494-15259536)
chr1 (238-308)||(15646912-15646982)
chr1 (195-252)||(26724339-26724396)
chr1 (195-252)||(26732456-26732513)
chr1 (202-307)||(36271192-36271297)
chr1 (114-180)||(14418135-14418203)
chr1 (149-181)||(28725581-28725613)
chr1 (79-135)||(38824334-38824390)
chr1 (79-135)||(47011285-47011341)
chr1 (114-179)||(2349751-2349818)
chr1 (68-135)||(4682969-4683036)
chr1 (149-180)||(29302058-29302089)
chr1 (149-180)||(29302180-29302211)
chr1 (79-134)||(31634434-31634489)
chr1 (79-180)||(33939340-33939443)
chr1 (149-180)||(36040140-36040171)
chr1 (149-180)||(41161580-41161611)
chr1 (149-180)||(48022710-48022741)
chr1 (149-179)||(639914-639944)
chr1 (149-179)||(4060286-4060316)
chr1 (79-137)||(5852731-5852789)
chr1 (53-135)||(15351732-15351814)
chr1 (194-287)||(18407466-18407557)
chr1 (149-179)||(23575312-23575342)
chr1 (149-179)||(28725461-28725491)
chr1 (149-179)||(33939292-33939322)
chr1 (79-137)||(46517984-46518042)
chr1 (53-98)||(2352973-2353018)
chr1 (194-235)||(15647258-15647299)
chr1 (53-98)||(23944054-23944099)
chr1 (82-135)||(24478706-24478759)
chr1 (86-135)||(34953946-34953995)
chr1 (62-135)||(43384524-43384597)
chr1 (84-128)||(8465974-8466018)
chr1 (79-135)||(8751473-8751529)
chr1 (149-181)||(14214543-14214575)
chr1 (148-180)||(14214643-14214675)
chr1 (79-135)||(15278606-15278662)
chr1 (79-135)||(15278608-15278664)
chr1 (94-130)||(21321376-21321412)
chr1 (79-135)||(23575361-23575417)
chr1 (79-135)||(25378300-25378356)
chr1 (79-135)||(27549086-27549142)
chr1 (79-135)||(31909792-31909848)
chr1 (79-131)||(33738208-33738260)
chr1 (79-135)||(35049973-35050029)
chr1 (79-135)||(37255167-37255223)
chr1 (79-135)||(38847343-38847399)
chr1 (79-135)||(39015604-39015660)
chr1 (114-180)||(40262462-40262530)
chr1 (209-261)||(44698067-44698119)
chr1 (79-162)||(45925257-45925341)
chr1 (79-135)||(48605111-48605167)
[»] chr2 (62 HSPs)
chr2 (53-179)||(43426623-43426751)
chr2 (53-180)||(38594338-38594467)
chr2 (53-180)||(38597934-38598063)
chr2 (79-180)||(5574153-5574256)
chr2 (192-302)||(32838637-32838747)
chr2 (68-180)||(1980979-1981092)
chr2 (196-309)||(19002758-19002871)
chr2 (53-168)||(30902290-30902407)
chr2 (53-181)||(22373627-22373758)
chr2 (68-182)||(34248407-34248523)
chr2 (68-181)||(3887826-3887941)
chr2 (53-180)||(25278191-25278320)
chr2 (54-153)||(3714235-3714335)
chr2 (203-301)||(41252763-41252862)
chr2 (69-179)||(6566910-6567022)
chr2 (68-174)||(20504243-20504351)
chr2 (57-128)||(38618146-38618217)
chr2 (53-179)||(3887850-3887978)
chr2 (84-179)||(19950112-19950209)
chr2 (243-301)||(33847488-33847546)
chr2 (120-180)||(34248499-34248561)
chr2 (217-302)||(752182-752267)
chr2 (114-181)||(38598018-38598087)
chr2 (192-284)||(1388480-1388572)
chr2 (79-135)||(4898208-4898264)
chr2 (79-135)||(4945602-4945658)
chr2 (53-183)||(38181777-38181909)
chr2 (114-180)||(38594422-38594490)
chr2 (68-131)||(7837117-7837180)
chr2 (79-180)||(24457143-24457246)
chr2 (198-253)||(38721626-38721681)
chr2 (53-176)||(5574108-5574233)
chr2 (82-135)||(10041588-10041641)
chr2 (79-182)||(26234067-26234172)
chr2 (86-180)||(37195046-37195142)
chr2 (195-287)||(4640196-4640288)
chr2 (120-174)||(6566999-6567055)
chr2 (79-180)||(19612935-19613038)
chr2 (79-135)||(20195332-20195388)
chr2 (149-181)||(24457093-24457125)
chr2 (149-181)||(26234017-26234049)
chr2 (149-180)||(2060198-2060229)
chr2 (149-180)||(2060617-2060648)
chr2 (79-180)||(8740513-8740616)
chr2 (53-179)||(11726491-11726618)
chr2 (53-135)||(21488068-21488150)
chr2 (86-115)||(4563925-4563954)
chr2 (82-135)||(10099598-10099651)
chr2 (86-135)||(11153246-11153295)
chr2 (86-135)||(26003485-26003534)
chr2 (62-135)||(34911124-34911197)
chr2 (79-135)||(5144311-5144367)
chr2 (79-135)||(9709701-9709757)
chr2 (238-270)||(11477054-11477086)
chr2 (79-135)||(12440673-12440729)
chr2 (79-135)||(17843994-17844050)
chr2 (149-185)||(26229435-26229471)
chr2 (79-135)||(29712530-29712585)
chr2 (79-135)||(37396247-37396303)
chr2 (149-181)||(38465782-38465814)
chr2 (192-244)||(40349639-40349691)
chr2 (79-135)||(43514799-43514855)
[»] chr7 (83 HSPs)
chr7 (53-180)||(38238777-38238907)
chr7 (53-180)||(34703460-34703589)
chr7 (68-179)||(25079202-25079315)
chr7 (53-173)||(40416923-40417045)
chr7 (57-168)||(1706854-1706967)
chr7 (53-179)||(45000618-45000746)
chr7 (68-169)||(22106672-22106775)
chr7 (68-169)||(40529576-40529679)
chr7 (53-181)||(29498776-29498906)
chr7 (84-169)||(4406422-4406509)
chr7 (204-302)||(23828904-23829002)
chr7 (203-301)||(38912906-38913004)
chr7 (53-138)||(27554535-27554620)
chr7 (194-309)||(5909067-5909182)
chr7 (68-139)||(22281475-22281546)
chr7 (203-302)||(25874360-25874459)
chr7 (68-138)||(716266-716336)
chr7 (79-179)||(24936576-24936678)
chr7 (195-312)||(21275621-21275738)
chr7 (57-180)||(27554518-27554643)
chr7 (192-284)||(34963375-34963467)
chr7 (192-302)||(7728582-7728692)
chr7 (68-180)||(38238816-38238930)
chr7 (195-307)||(40037716-40037827)
chr7 (53-174)||(21387576-21387699)
chr7 (53-181)||(25079224-25079354)
chr7 (53-179)||(14995860-14995988)
chr7 (56-109)||(18234412-18234465)
chr7 (79-180)||(34275234-34275338)
chr7 (53-179)||(40416901-40417029)
chr7 (114-176)||(46943942-46944006)
chr7 (79-180)||(10414933-10415036)
chr7 (192-263)||(16831275-16831346)
chr7 (84-181)||(24935885-24935984)
chr7 (53-135)||(2533957-2534039)
chr7 (192-234)||(18662319-18662361)
chr7 (242-308)||(18662356-18662422)
chr7 (53-181)||(22106684-22106814)
chr7 (53-181)||(40529537-40529667)
chr7 (194-252)||(46683064-46683122)
chr7 (192-285)||(46096747-46096840)
chr7 (79-135)||(3498337-3498393)
chr7 (79-135)||(27242457-27242513)
chr7 (79-135)||(28003219-28003275)
chr7 (79-135)||(37066223-37066279)
chr7 (192-252)||(38663682-38663742)
chr7 (79-135)||(46477176-46477232)
chr7 (68-108)||(46943976-46944016)
chr7 (149-180)||(2297325-2297356)
chr7 (149-180)||(2360443-2360474)
chr7 (79-179)||(4406122-4406224)
chr7 (426-497)||(4609583-4609654)
chr7 (79-180)||(6455543-6455646)
chr7 (149-180)||(8595262-8595293)
chr7 (149-180)||(10422923-10422954)
chr7 (53-181)||(15051100-15051230)
chr7 (150-181)||(16777885-16777916)
chr7 (149-184)||(34275181-34275216)
chr7 (149-184)||(43103062-43103097)
chr7 (53-99)||(716311-716357)
chr7 (86-132)||(7295100-7295146)
chr7 (149-179)||(8447712-8447742)
chr7 (149-179)||(8571497-8571527)
chr7 (149-179)||(28949390-28949420)
chr7 (194-256)||(42589694-42589756)
chr7 (150-180)||(46648743-46648773)
chr7 (201-235)||(49111259-49111293)
chr7 (203-252)||(8566261-8566310)
chr7 (150-179)||(8571377-8571406)
chr7 (79-128)||(28949323-28949372)
chr7 (62-135)||(33471516-33471589)
chr7 (130-180)||(4407713-4407765)
chr7 (149-181)||(6455664-6455696)
chr7 (79-135)||(19531994-19532050)
chr7 (79-135)||(26385668-26385724)
chr7 (149-181)||(26824899-26824931)
chr7 (238-302)||(26980244-26980308)
chr7 (79-135)||(30005917-30005973)
chr7 (79-135)||(33471531-33471587)
chr7 (256-308)||(36595367-36595419)
chr7 (79-135)||(37066225-37066281)
chr7 (203-302)||(46152239-46152336)
chr7 (79-135)||(46221121-46221177)
[»] chr3 (75 HSPs)
chr3 (53-180)||(51239237-51239366)
chr3 (53-179)||(36362599-36362727)
chr3 (68-181)||(51617363-51617478)
chr3 (68-180)||(52931635-52931749)
chr3 (79-179)||(21403939-21404039)
chr3 (56-180)||(38455159-38455285)
chr3 (79-179)||(41349703-41349806)
chr3 (79-180)||(50260927-50261030)
chr3 (53-180)||(29565126-29565255)
chr3 (56-179)||(42449100-42449225)
chr3 (53-180)||(52168300-52168429)
chr3 (68-164)||(52315400-52315498)
chr3 (79-176)||(29720119-29720218)
chr3 (68-179)||(29512163-29512276)
chr3 (215-301)||(1402014-1402100)
chr3 (424-498)||(4741093-4741168)
chr3 (68-180)||(33412497-33412611)
chr3 (79-139)||(17552520-17552580)
chr3 (68-180)||(33412460-33412573)
chr3 (192-302)||(45153502-45153612)
chr3 (68-137)||(22099811-22099880)
chr3 (53-138)||(22173812-22173897)
chr3 (192-297)||(31437802-31437906)
chr3 (195-302)||(44720854-44720961)
chr3 (53-181)||(12744894-12745024)
chr3 (192-302)||(23070829-23070939)
chr3 (114-182)||(51617323-51617393)
chr3 (57-130)||(32759012-32759085)
chr3 (68-182)||(52315422-52315538)
chr3 (53-135)||(7981186-7981268)
chr3 (79-179)||(25881131-25881233)
chr3 (86-180)||(10872722-10872818)
chr3 (57-130)||(37492402-37492475)
chr3 (68-179)||(41349655-41349768)
chr3 (114-180)||(51239321-51239389)
chr3 (192-287)||(23073658-23073753)
chr3 (114-181)||(17552470-17552539)
chr3 (192-248)||(4204051-4204107)
chr3 (79-135)||(16127789-16127845)
chr3 (79-135)||(21659181-21659237)
chr3 (114-179)||(29565104-29565171)
chr3 (149-181)||(50261049-50261081)
chr3 (113-179)||(52168278-52168346)
chr3 (79-179)||(8439301-8439403)
chr3 (79-135)||(17005001-17005059)
chr3 (68-135)||(26121580-26121647)
chr3 (68-135)||(26244421-26244488)
chr3 (68-135)||(34935579-34935646)
chr3 (149-180)||(38677680-38677711)
chr3 (192-315)||(52685097-52685220)
chr3 (114-179)||(52931751-52931818)
chr3 (68-134)||(4181973-4182039)
chr3 (192-302)||(23057092-23057202)
chr3 (149-179)||(25881251-25881281)
chr3 (79-179)||(38677560-38677662)
chr3 (238-308)||(40696114-40696184)
chr3 (101-135)||(53683848-53683882)
chr3 (194-252)||(54987249-54987307)
chr3 (86-135)||(3020664-3020713)
chr3 (149-182)||(5919424-5919457)
chr3 (53-98)||(18940047-18940092)
chr3 (53-98)||(29512209-29512254)
chr3 (114-181)||(36362682-36362750)
chr3 (86-135)||(40065371-40065420)
chr3 (150-179)||(40470534-40470563)
chr3 (203-260)||(48600645-48600702)
chr3 (79-135)||(1043966-1044022)
chr3 (121-179)||(29720071-29720131)
chr3 (79-135)||(39530436-39530492)
chr3 (79-135)||(39530438-39530494)
chr3 (79-135)||(40326479-40326535)
chr3 (83-135)||(42595784-42595836)
chr3 (79-135)||(44435217-44435273)
chr3 (79-135)||(52638076-52638132)
chr3 (79-135)||(54680532-54680588)
[»] scaffold0024 (2 HSPs)
scaffold0024 (53-184)||(120135-120268)
scaffold0024 (68-180)||(120177-120291)
[»] scaffold0536 (1 HSPs)
scaffold0536 (53-179)||(3945-4073)
[»] chr6 (42 HSPs)
chr6 (68-182)||(30397717-30397832)
chr6 (53-179)||(17773496-17773624)
chr6 (53-180)||(21998033-21998162)
chr6 (53-181)||(21506456-21506586)
chr6 (68-179)||(21506495-21506608)
chr6 (71-178)||(30460648-30460757)
chr6 (53-180)||(28577595-28577724)
chr6 (79-139)||(17268050-17268110)
chr6 (53-180)||(31536305-31536437)
chr6 (68-181)||(17773533-17773648)
chr6 (192-262)||(30456799-30456869)
chr6 (53-179)||(21998056-21998184)
chr6 (192-308)||(33605057-33605173)
chr6 (68-179)||(30397757-30397869)
chr6 (424-469)||(9200878-9200923)
chr6 (53-179)||(14310516-14310644)
chr6 (79-180)||(8145992-8146095)
chr6 (203-281)||(3686811-3686889)
chr6 (79-179)||(6560700-6560802)
chr6 (195-281)||(10228329-10228414)
chr6 (53-172)||(30460615-30460736)
chr6 (79-135)||(6047999-6048055)
chr6 (149-181)||(6560650-6560682)
chr6 (225-309)||(8082495-8082579)
chr6 (53-179)||(8449591-8449721)
chr6 (53-179)||(8458395-8458525)
chr6 (110-179)||(4844284-4844355)
chr6 (53-135)||(3012401-3012483)
chr6 (79-133)||(3212284-3212338)
chr6 (149-179)||(8145943-8145973)
chr6 (149-179)||(14310636-14310666)
chr6 (149-179)||(31398221-31398251)
chr6 (79-179)||(31398269-31398371)
chr6 (58-135)||(15467614-15467691)
chr6 (79-135)||(2033210-2033266)
chr6 (79-135)||(7418918-7418974)
chr6 (79-135)||(10731514-10731570)
chr6 (79-135)||(10731516-10731572)
chr6 (79-135)||(12349858-12349914)
chr6 (149-181)||(18097175-18097207)
chr6 (79-135)||(21478594-21478650)
chr6 (79-135)||(21478596-21478652)
[»] chr4 (63 HSPs)
chr4 (53-179)||(13689553-13689681)
chr4 (53-179)||(52817584-52817712)
chr4 (54-179)||(5418533-5418660)
chr4 (54-169)||(24941116-24941233)
chr4 (203-301)||(41899075-41899173)
chr4 (93-181)||(5281192-5281282)
chr4 (203-297)||(5168521-5168615)
chr4 (194-287)||(8839684-8839775)
chr4 (68-134)||(10031563-10031629)
chr4 (53-138)||(38539495-38539580)
chr4 (101-184)||(55087776-55087861)
chr4 (202-308)||(38868831-38868937)
chr4 (79-179)||(56328493-56328595)
chr4 (84-180)||(14450951-14451049)
chr4 (49-138)||(6243638-6243727)
chr4 (53-180)||(19934632-19934761)
chr4 (53-180)||(29006852-29006981)
chr4 (86-135)||(40881477-40881526)
chr4 (96-179)||(44156060-44156145)
chr4 (53-180)||(54164807-54164936)
chr4 (192-248)||(3167167-3167223)
chr4 (79-135)||(20542846-20542902)
chr4 (79-135)||(42013187-42013243)
chr4 (79-135)||(51126146-51126202)
chr4 (79-135)||(52281161-52281217)
chr4 (68-135)||(4406273-4406340)
chr4 (79-179)||(21884062-21884164)
chr4 (53-108)||(29223959-29224014)
chr4 (224-302)||(42563388-42563467)
chr4 (204-274)||(3784073-3784143)
chr4 (192-262)||(6167846-6167916)
chr4 (86-134)||(48603606-48603654)
chr4 (79-135)||(51126148-51126204)
chr4 (79-134)||(3517105-3517160)
chr4 (149-184)||(6126767-6126802)
chr4 (149-180)||(21884012-21884043)
chr4 (150-181)||(28702177-28702208)
chr4 (149-180)||(49481995-49482026)
chr4 (149-180)||(56328443-56328474)
chr4 (203-261)||(6317015-6317073)
chr4 (53-135)||(21586935-21587017)
chr4 (150-180)||(28702055-28702085)
chr4 (86-135)||(4484115-4484164)
chr4 (82-135)||(16391473-16391526)
chr4 (238-307)||(24858618-24858687)
chr4 (79-135)||(4044339-4044395)
chr4 (56-128)||(8826885-8826957)
chr4 (79-162)||(9011788-9011872)
chr4 (79-135)||(13743899-13743955)
chr4 (86-134)||(18626757-18626805)
chr4 (79-135)||(21003981-21004037)
chr4 (86-134)||(22493618-22493666)
chr4 (79-135)||(23329413-23329469)
chr4 (79-135)||(23710876-23710932)
chr4 (79-135)||(23754235-23754291)
chr4 (79-135)||(24529614-24529670)
chr4 (79-135)||(24529616-24529672)
chr4 (79-135)||(29978533-29978589)
chr4 (79-135)||(32112357-32112413)
chr4 (79-135)||(49481921-49481977)
chr4 (79-135)||(49745506-49745562)
chr4 (195-271)||(53333557-53333633)
chr4 (149-181)||(54164928-54164960)
[»] scaffold0047 (2 HSPs)
scaffold0047 (68-179)||(61195-61307)
scaffold0047 (68-181)||(61156-61270)
[»] scaffold0039 (2 HSPs)
scaffold0039 (53-179)||(54405-54533)
scaffold0039 (120-180)||(54382-54444)
[»] scaffold0007 (2 HSPs)
scaffold0007 (53-181)||(246788-246918)
scaffold0007 (53-180)||(246812-246941)
[»] scaffold0016 (1 HSPs)
scaffold0016 (192-297)||(79968-80073)
[»] scaffold0027 (2 HSPs)
scaffold0027 (68-173)||(17198-17306)
scaffold0027 (114-180)||(17161-17228)
[»] scaffold0050 (1 HSPs)
scaffold0050 (79-181)||(6206-6310)
[»] scaffold0635 (1 HSPs)
scaffold0635 (82-135)||(5429-5482)
[»] scaffold0172 (2 HSPs)
scaffold0172 (79-135)||(11625-11681)
scaffold0172 (79-135)||(11627-11683)
[»] scaffold0009 (1 HSPs)
scaffold0009 (53-182)||(7674-7805)
[»] scaffold0268 (1 HSPs)
scaffold0268 (195-285)||(19123-19213)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-134)||(89630-89696)
[»] scaffold0650 (1 HSPs)
scaffold0650 (370-410)||(1627-1667)
[»] scaffold0121 (1 HSPs)
scaffold0121 (79-135)||(17475-17531)
[»] scaffold0111 (1 HSPs)
scaffold0111 (79-135)||(38050-38106)


Alignment Details
Target: scaffold0236 (Bit Score: 270; Significance: 1e-150; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 181 - 498
Target Start/End: Complemental strand, 20272 - 19956
Alignment:
Q  181 tattaagctactacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaa 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20272 tattaagctactacaaaaatgaaaatagttgataaattttaagtagaaaaagttattttttaaagtttcaatatattgaatgtatcatttccaagacaaa 20173  T
Q  281 atttcttctctagtcttcttaataagtgttctaagagggaggggtaaaacaactgtttattttgttttattgtaaaattgataaacgtagaggcaagaga 380  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20172 atttcttctctagtcttcttaataagtgttctaagggggaggggtaaaacaactgtttattttgttttattgtaaaactgataaacgtggaggcaagaga 20073  T
Q  381 caagacagaaactgaaatttttgttcctcattaaatcacacaagtttaccatattgggcataggataagagtttcttttctgtttttatgctctgttcag 480  Q
    ||||||||   ||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  20072 caagacaggggctgaaatttttgtccctcattaaatcacacaagtttaccatatt-ggcatagactaagagtttcttttctgtttttatgctctgttcag 19974  T
Q  481 gcaactattgtaaatatt 498  Q
    ||||||||||||||||||    
T  19973 gcaactattgtaaatatt 19956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20573 - 20541
Alignment:
Q  19 tttgatttgctacaaaaaataaagggtattgct 51  Q
    |||||||||||||||||||||||||||||||||    
T  20573 tttgatttgctacaaaaaataaagggtattgct 20541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 40098777 - 40098906
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||    
T  40098777 aagcaaaaatctactttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatt 40098876  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  40098877 tttgcttatattagtgaccggagggtgtat 40098906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 14381346 - 14381233
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  14381346 ttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 14381247  T
Q  166 gaccggagggtgta 179  Q
    ||||||||||||||    
T  14381246 gaccggagggtgta 14381233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 9056038 - 9056166
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||  ||    
T  9056038 aagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattaaatgtatctaaaaagtgaatt 9056137  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  9056138 tttgcttatattagtgaccggagggtgta 9056166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 7377662 - 7377549
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||  ||||||||||||  |||    
T  7377662 ttttagatacattcaattaatgatgtatgtgacatataataaagcccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttataccagt 7377563  T
Q  166 gaccggagggtgta 179  Q
    ||||||| ||||||    
T  7377562 gaccggatggtgta 7377549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 26014665 - 26014574
Alignment:
Q  80 tcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgacc 169  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  26014665 tcaattaataatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagtgacc 26014574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 11692144 - 11692046
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | |||| ||||| |||||| |||||||||||||||||||||    
T  11692144 ttcaattaatgatgtatgtgacatataataaagatcacatacatcattaatt-aatgtgtctaaaaagtggatttttgtttatattagtgaccggagggt 11692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 29451762 - 29451869
Alignment:
Q  71 tagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt----aaagagtgg-tttttgcttatattagt 165  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||    ||| | ||| |||||||||||||||||    
T  29451762 tagatatattcaattaatgatgtatgtgacatataattaagaccacatacattattaattgaatgtatttaaaaaaaaatggatttttgcttatattagt 29451861  T
Q  166 gaccggag 173  Q
    || |||||    
T  29451862 gatcggag 29451869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 13211358 - 13211277
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  13211358 aaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattaaatgtat 13211277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 13228913 - 13228972
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  13228913 ttcaattaatgatatatgtgacatataataaagaccacatacatcattaattaaatgtat 13228972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 44814165 - 44814057
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||  ||||| |||||||||||||||||||||  |||   ||||||||||||||| |  |||||| | ||||| |||||||||||||||||| |    
T  44814165 tacaaaaatagaaataattgataaattttaagtagaaagggttgcattttaaagtttcaatgt--tgaatgcaccattttcaagacaaaatttcttcttt 44814068  T
Q  292 agtcttcttaa 302  Q
    |||||||||||    
T  44814067 agtcttcttaa 44814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 15285674 - 15285756
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    |||||||||| ||||| |||  || |||||||||||||||||||||||||||||||| | || |||| |||||||||||||||    
T  15285674 aaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaattgaatgtatt 15285756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 15466043 - 15466125
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    |||||||||| ||||| |||  || |||||||||||||||||||||||||||||||| | || |||| |||||||||||||||    
T  15466043 aaaaatttattttttaaatacatttaattaatgatgtatgtgacatataataaagactatatacatccttaattgaatgtatt 15466125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 33574845 - 33574930
Alignment:
Q  93 tatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtg 177  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||| |||||| ||||||||||||||||||||||    
T  33574845 tatgtgacatataataaag-ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagtgaccggagggtg 33574930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 37716193 - 37716120
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaatt 130  Q
    |||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||| ||||  ||||||||||    
T  37716193 aaaaatttattttttagatacattcaattaatgatgtatgtgatatataataaagactacatatatcattaatt 37716120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 42631776 - 42631687
Alignment:
Q  213 taaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    ||||||||||||||||||| ||| |||||||||||| |||  |||||||| | ||||| ||||||||||||| |||| ||| ||||||||    
T  42631776 taaattttaagtagaaaaaattaccttttaaagttttaatgcattgaatgcaccattttcaagacaaaatttattctttagacttcttaa 42631687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 40098868 - 40098750
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||   | || || |   |||||  |||||||||||||||||| |||| ||| | |||||||||||||||||    
T  40098868 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 40098769  T
Q  166 gaccggagggtgtattatt 184  Q
    |||||||||||||||||||    
T  40098768 gaccggagggtgtattatt 40098750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 14381270 - 14381383
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||   | || || | | ||||| ||||||||||||||||||| |||| ||||| |||||| ||||||||||    
T  14381270 ttttagatacattcaattaatgatgtatgtggtctttattatatatcacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagt 14381369  T
Q  166 gaccggagggtgta 179  Q
    ||||||||| ||||    
T  14381370 gaccggaggatgta 14381383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 34496889 - 34496999
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||| ||||| ||| ||||||||||||| ||||  |||  || ||||||||||||  |||||||  || |||| |||||||||||||||||| |    
T  34496889 tacaaaaatggaaataattggtaaattttaagtataaaatattactttataaagtttcaatgcattgaatacataatttacaagacaaaatttcttcttt 34496988  T
Q  292 agtcttcttaa 302  Q
    |  ||||||||    
T  34496989 aaacttcttaa 34496999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 9056144 - 9056015
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  |||||||||  || |||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| ||||  ||    
T  9056144 aagcaaaaattcactttttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaagtgaatt 9056045  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||| |||||||||||||||||    
T  9056044 tttgcttatatttgtgaccggagggtgtat 9056015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 31505135 - 31505031
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggttttt-gcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| |  ||||  || |||||| |||||||||||||||||||||||    
T  31505135 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 31505036  T
Q  177 gtatt 181  Q
    |||||    
T  31505035 gtatt 31505031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 9808394 - 9808474
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    ||||||||||  ||||| |||  ||||||||||| |||||||||  ||||||||||||||||| ||| ||||||| |||||||    
T  9808394 caaaaatttactttttatatacattcaattaatggtgtatgtga--tataataaagaccacatacataattaattaaatgtat 9808474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 1739688 - 1739634
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataat 107  Q
    |||||||||||||  |||||||||  ||||||||||||||||||| |||||||||    
T  1739688 aagcaaaaatttactttttagatacattcaattaatgatgtatgtaacatataat 1739634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 1739644 - 1739710
Alignment:
Q  115 acatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    |||| ||||||||||||||||||| |||| |||   |||||||||||||||||||||||||||||||    
T  1739644 acatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgta 1739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 10467176 - 10467136
Alignment:
Q  370 gaggcaagagacaagacagaaactgaaatttttgttcctca 410  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  10467176 gaggcaagagacaagacaaaaactgatatttttgttcctca 10467136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 11295738 - 11295658
Alignment:
Q  102 tataataaagaccacatgcatcattaattgaatgtat-taaagag-tggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||| ||||||| | ||||||||| ||||  | || |||||||||||| ||||||||||| |||||||    
T  11295738 tataataaagaccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtgaccggaaggtgtat 11295658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 27781981 - 27781925
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  27781981 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 27781925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 31810449 - 31810481
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  31810449 tttttgcttatattagtgaccggagggtgtatt 31810481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 41178001 - 41178057
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| | ||||||||||||||||||||||||    
T  41178001 ttcaattaatgatgtatgtggtccataatataaaccacatgcatcattaattgaatg 41178057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 42149169 - 42149225
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||| || |||||| || ||||||||||||||||    
T  42149169 ttcaattaatgatgtatgtgatttatattagagaccatatacatcattaattgaatg 42149225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 42631822 - 42631878
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  42631822 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 42631878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 31505153 - 31505184
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  31505153 tttttgcttatattagtgaccggagggtgtat 31505184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 41061298 - 41061227
Alignment:
Q  213 taaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaattt 284  Q
    |||| ||||||||||||| ||||| ||||||||||| ||||| || ||||||  ||||  ||||||||||||    
T  41061298 taaaatttaagtagaaaaggttattttttaaagttttaatatgttaaatgtacaatttttaagacaaaattt 41061227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 1744257 - 1744227
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  1744257 tttttgcttatattagtgaccggagggtgta 1744227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 10117093 - 10117011
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||  ||||||||   ||||||||||||||||| ||| || || || ||||||||| ||||||| | ||||||    
T  10117093 aagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcatttaatgaatg 10117011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 24053622 - 24053592
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  24053622 tttttgcttatattagtgaccggagggtgta 24053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 24053614 - 24053696
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||| |||| |||||| |   |||| |||||||||||||||   ||||||||||||||  ||||||||||| ||||||    
T  24053614 aagcaaaaaattatattttaggttcattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatg 24053696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 7258651 - 7258684
Alignment:
Q  102 tataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||| |||||||||||||||||||    
T  7258651 tataataaagaccatatgcatcattaattgaatg 7258684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 13228925 - 13228864
Alignment:
Q  121 atcattaattgaatgtatt-aaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||| ||| | ||| |||||| ||||||||||||||| |||||||||    
T  13228925 atcattaattgaatgtatttaaaaaatggatttttgtttatattagtgaccgaagggtgtat 13228864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 13271788 - 13271735
Alignment:
Q  81 caattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||| |||||||  ||||||| | || ||||||||||||||||||||    
T  13271788 caattaatgatatatgtgatttataatataaactacatgcatcattaattgaat 13271735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 13496460 - 13496427
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatta 182  Q
    |||||||||||||||||||||||| |||||||||    
T  13496460 tttttgcttatattagtgaccggatggtgtatta 13496427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 3611866 - 3611810
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  3611866 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 3611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 3611812 - 3611868
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  3611812 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 3611868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 8568917 - 8568861
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  8568917 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 8568861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 8568863 - 8568919
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  8568863 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 8568919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 14955259 - 14955315
Alignment:
Q  225 agaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaa 281  Q
    |||||||||||  ||||||| ||||||| | ||||||| ||||||||||||| ||||    
T  14955259 agaaaaagttactttttaaactttcaatgtgttgaatgcatcatttccaagataaaa 14955315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 34326288 - 34326344
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||    |||||||||||| | || ||||||||||||||||    
T  34326288 ttcaattaatgatgtatgttgtttataataaagactatatacatcattaattgaatg 34326344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 38883989 - 38884045
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  ||| |||| ||||||||||||||||    
T  38883989 ttcaattaatgatgtatgtggtttataatatggacaacatacatcattaattgaatg 38884045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 39655514 - 39655458
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  39655514 ttcaattaatgatgtatgtggtccataatatggaccacatacatcattaattgaatg 39655458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 3851486 - 3851357
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| || |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||    
T  3851486 aagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatt 3851387  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||| ||||||||||||    
T  3851386 tttgcttatattagtgatcggagggtgtat 3851357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 37944725 - 37944597
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||  ||    
T  37944725 aagcaaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaatgtatctaaaaagtgaatt 37944626  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||| ||||    
T  37944625 tttgcttatattagtgaccggaggatgta 37944597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 42013945 - 42013820
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||  ||    
T  42013945 aagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaatt 42013846  T
Q  151 tttgcttatattagtgaccggagggt 176  Q
    ||||||||||||||||||||||||||    
T  42013845 tttgcttatattagtgaccggagggt 42013820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 13311293 - 13311170
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagt-ggtttttgc 155  Q
    |||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||  || ||| |  ||||||    
T  13311293 aaaaatctatcttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaattgaatgtatctaaaagtagacttttgc 13311194  T
Q  156 ttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||||||||    
T  13311193 ttatattagtgaccggagggtgta 13311170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 23914964 - 23914835
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  ||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||    
T  23914964 aagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatt 23914865  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  23914864 tttgcttatattagtgaccggagggtgtat 23914835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 15712138 - 15712266
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagag-tggtt 150  Q
    ||||||||||  || |||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| || || ||    
T  15712138 aagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatttaaaaagttgatt 15712237  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||| ||| |||||||||||    
T  15712238 tttgcttatattaatgatcggagggtgta 15712266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 19531318 - 19531446
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||  ||    
T  19531318 aagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaatt 19531417  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||| |||||| ||||    
T  19531418 tttgcttatattagtgatcggaggatgta 19531446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 53 - 170
Target Start/End: Complemental strand, 11262451 - 11262332
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| || || ||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||  ||    
T  11262451 aagcaaaaattcattttgtagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaatt 11262352  T
Q  151 tttgcttatattagtgaccg 170  Q
    ||||||||||||||||||||    
T  11262351 tttgcttatattagtgaccg 11262332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 8961316 - 8961214
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccggagggt 176  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||    
T  8961316 ttcaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgtatctaaagagtgaatttttgcttatattagtgactggagggt 8961217  T
Q  177 gta 179  Q
    |||    
T  8961216 gta 8961214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 26300219 - 26300105
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||| |||   |||||||||||||||||    
T  26300219 ttttagatacattcaattaatgatgtatatgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagt 26300120  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  26300119 gaccggagggtgtat 26300105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 31706430 - 31706356
Alignment:
Q  424 gtttaccatattgggcataggataagagtttcttttctgtttttatgctctgttcaggcaactattgtaaatatt 498  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31706430 gtttaccatattgggcataggctaagagtttcttttctgtttttatgctttgttcaggcaactattgtaaatatt 31706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 38835542 - 38835671
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtg--gt 149  Q
    ||||||||||| || |||||||||  || |||||||||||||||||||||||||||||||||  || |||||||||||||||||| ||||| ||||   |    
T  38835542 aagcaaaaattcattttttagatacatttaattaatgatgtatgtgacatataataaagaccgtatacatcattaattgaatgtatttaaaaagtgaatt 38835641  T
Q  150 ttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||| |||||||||    
T  38835642 ttttgcttatattagtgaccagagggtgta 38835671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 13157430 - 13157327
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||| ||||| ||||||||||||||| |||||||||| |    
T  13157430 ttcaattaatgatgtatgtgatatataataaagaccatatacatcattaattgaatatatctaaaaagtggatttttgcttatattaatgaccggaggat 13157331  T
Q  177 gtat 180  Q
    ||||    
T  13157330 gtat 13157327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 43446876 - 43446951
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaa 128  Q
    |||||||||||||  |||||||||  || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  43446876 aagcaaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaa 43446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 37870125 - 37870024
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| | || ||  ||||||||||||||| |||| | ||| |||||||||||||||||    
T  37870125 ttttagatatattcaattaatgatgaatgtgacatataataaagactatatacaatattaattgaatgtatctaaaaaatggttttttgcttatattagt 37870026  T
Q  166 ga 167  Q
    ||    
T  37870025 ga 37870024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 21945423 - 21945478
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21945423 ttcaattaatgatgtatgtgacatataataaagaccagatacatcattaattgaat 21945478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 15965893 - 15965795
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||| ||||| |||||||||||||||||||||  ||||||| ||| |||  |||||||| | |||||| ||||||| ||||||||| |||||||||||    
T  15965893 aaataattgatgaattttaagtagaaaaagttacattttaaaatttaaatgcattgaatgcaccatttctaagacaacatttcttctttagtcttctta 15965795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 35969175 - 35969267
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccgga 172  Q
    ||||||||||||||||| |||||||||||||| |||| || |||||||||||||||| |||| ||||  ||||| ||||||||||||| ||||    
T  35969175 aattaatgatgtatgtggcatataataaagactacatacaccattaattgaatgtatctaaaaagtgaatttttacttatattagtgatcgga 35969267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 19531424 - 19531293
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  |||||||||  ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| ||||  ||    
T  19531424 aagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaagtgaatt 19531325  T
Q  151 tttgcttatattagtgaccggagggtgtatta 182  Q
    |||||||||||| |||||||||||||||||||    
T  19531324 tttgcttatatttgtgaccggagggtgtatta 19531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 35172473 - 35172529
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||    
T  35172473 ttcaattaatgatgtatgtgacctataatatagaccacatacattattaattgaatg 35172529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 4462655 - 4462577
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaa 281  Q
    ||||| || |||| ||||| |||||||| ||||  ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  4462655 aaataatttataagttttatgtagaaaatgttactttttaaactttcaatatcttgaatgcatcatttccaagacaaaa 4462577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 5259428 - 5259530
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| || ||||  || | ||||||||||||||||||||||||||||    
T  5259428 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 5259527  T
Q  177 gta 179  Q
    |||    
T  5259528 gta 5259530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 13157365 - 13157467
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagtg-gtttttgcttatattagtg 166  Q
    |||||||||| ||||||||||||||||| ||   | || || | | ||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||||    
T  13157365 ttttagatatattcaattaatgatgtatatggtctttattatatatcacatacatcattaattgaatgttttaaaaagtgaatttttgcttatattagtg 13157464  T
Q  167 acc 169  Q
    |||    
T  13157465 acc 13157467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 11795810 - 11795729
Alignment:
Q  102 tataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||| || |||||||||||||||| || ||||  || | |||||||||||||||||||||||||||| ||||    
T  11795810 tataataaagaccatatacatcattaattgaatgaatctaaaatgttgatttttgcttatattagtgaccggagggtatatt 11795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 15966053 - 15965997
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  15966053 ttcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatg 15965997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 21152631 - 21152687
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  21152631 ttcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 21152687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 21159766 - 21159822
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  21159766 ttcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 21159822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 21163573 - 21163629
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  21163573 ttcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 21163629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 42013839 - 42013967
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  |||||||||  ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| ||||  ||    
T  42013839 aagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaagtgaatt 42013938  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||||||||| ||||    
T  42013939 tttgcttatatttgtgaccggaggatgta 42013967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 3851395 - 3851509
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||   | || || |   ||||| ||||||||||| ||||||| |||| | ||  |||||||||||||||||    
T  3851395 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattaaatgtatctaaaaaatgaatttttgcttatattagt 3851494  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  3851495 gaccggagggtgtat 3851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 20518203 - 20518305
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||| | |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || |||| ||| | |||||||||||| ||||    
T  20518203 ttttagatttattcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatgtaaaaagtagatttttgcttataatagt 20518302  T
Q  166 gac 168  Q
    |||    
T  20518303 gac 20518305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 35969192 - 35969122
Alignment:
Q  113 ccacatgcatcattaatt-gaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    |||||| ||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||| |||||    
T  35969192 ccacatacatcattaatttgaatgtatctaaaaagtggatttttgcttatattagtgaccggaggatgtat 35969122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 1352436 - 1352387
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    ||||| ||||||||||||||||| |||||||||  |||||||||||||||    
T  1352436 aaataattgataaattttaagtaaaaaaagttacattttaaagtttcaat 1352387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 14416500 - 14416447
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  14416500 aattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 14416447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 19367056 - 19366984
Alignment:
Q  216 attttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttct 289  Q
    ||||||||||||||| ||||  ||||||||||||||| |||||||||    |||| ||||||||||||||||||    
T  19367056 attttaagtagaaaa-gttactttttaaagtttcaatttattgaatgctcaattttcaagacaaaatttcttct 19366984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 26300128 - 26300257
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||||||  |||||||||  ||||||||||||||||||||   | || || |   || || ||||||||||||||||||| |||| |||    |    
T  26300128 aagcaaaaatttactttttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcattaattgaatgtatctaaaaagtaaaat 26300227  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||| ||||||||||||||||||||||||||    
T  26300228 tttacttatattagtgaccggagggtgtat 26300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 7336952 - 7336896
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  7336952 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 7336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 14064907 - 14064851
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   ||||||  |||||||| ||||||||||||||||    
T  14064907 ttcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatg 14064851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 15712183 - 15712115
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||||||| |||| | ||| ||||||||||||||| ||||||||| ||||||    
T  15712183 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatattaatgaccggagagtgtat 15712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 1355471 - 1355380
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatt 283  Q
    ||||||||| |||||| |||||||||||||| ||||| || |||  ||| |||||||||||  | | |||| | ||||| ||||||||||||    
T  1355471 tacaaaaataaaaataattgataaattttaaatagaagaaattacatttaaaagtttcaatgcagtaaatgcaccattttcaagacaaaatt 1355380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 5259410 - 5259379
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  5259410 tttttgcttatattagtgaccggagggtgtat 5259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 6763812 - 6763843
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  6763812 tttttgcttatattagtgaccggagggtgtat 6763843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 23914956 - 23914987
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  23914956 tttttgcttatattagtgaccggagggtgtat 23914987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 41180328 - 41180359
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  41180328 tttttgcttatattagtgaccggagggtgtat 41180359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 1996872 - 1996842
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  1996872 tttttgcttatattagtgaccggagggtgta 1996842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 1996963 - 1996993
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  1996963 tttttgcttatattagtgaccggagggtgta 1996993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 14153466 - 14153364
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||| ||||||   ||||||||||| || |||||||||||| |||||| || |||| ||| | |||||||||||| |||||||| || |||    
T  14153466 ttcatttaatgatatatgtggtctataataaagatcatatgcatcattaaatgaatgaatataaaaagtagatttttgcttataatagtgaccagatggt 14153367  T
Q  177 gta 179  Q
    |||    
T  14153366 gta 14153364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 20019864 - 20019894
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||||||||||||||||||||    
T  20019864 ttttgcttatattagtgaccggagggtgtat 20019894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 25408666 - 25408536
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||||||| ||||||||   |||||| |||||||||||||   | || |  |||| |||| ||||||| |||||||| || ||||   ||  ||    
T  25408666 aagcaaaaatttatgttttagattcattcaataaatgatgtatgtggtctttattgtagacaacatacatcatttattgaatgaatctaaaatatgaatt 25408567  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||    
T  25408566 tttgcttatatttgtgaccggagggtgtatt 25408536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 25408560 - 25408642
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||| || ||||||||   |||||| ||||||||||||    || |||||||||||||| ||||||| ||||||||    
T  25408560 aagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatg 25408642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 25772179 - 25772149
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  25772179 tttttgcttatattagtgaccggagggtgta 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 25772271 - 25772301
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||||||||||||||||||||    
T  25772271 ttttgcttatattagtgaccggagggtgtat 25772301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 26141852 - 26141750
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||    ||||||||||| |||||||||||||||    
T  26141852 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggt 26141753  T
Q  177 gta 179  Q
    |||    
T  26141752 gta 26141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 26141870 - 26141900
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  26141870 tttttgcttatattagtgaccggagggtgta 26141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 26168285 - 26168227
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta 137  Q
    ||||||||||||||||||||   |||||||  |||||||| |||||||| |||||||||    
T  26168285 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgta 26168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 27314500 - 27314470
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  27314500 tttttgcttatattagtgaccggagggtgta 27314470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 38370620 - 38370534
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttct 289  Q
    ||||| ||||||||||||| ||||||||| |||  ||| |||  || |||  ||| |||| ||||||| ||||||||||||||||||    
T  38370620 aaataattgataaattttacgtagaaaaatttacttttaaaaacttaaatgcattcaatgcatcattttcaagacaaaatttcttct 38370534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 9515617 - 9515541
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaa 280  Q
    ||||| ||||||||||||| ||| ||||| |  | |||||||||||||||  |||||||| || ||||||||||||||    
T  9515617 aaataattgataaattttatgtaaaaaaaatact-ttttaaagtttcaatgcattgaatgcataatttccaagacaaa 9515541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 22565642 - 22565695
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||   ||||||| ||||| ||| ||||||||||||||||    
T  22565642 aattaatgatgtatgtggtttataatatagaccgcatacatcattaattgaatg 22565695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 36302246 - 36302158
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagtta--tcttttaaagtttcaatatattgaatgtatcatttccaagacaaa 280  Q
    |||||| ||||||| ||| |||||||||| ||||||||||||  | |||| || |||||||  |||||||| || |||||| |||||||    
T  36302246 caaaaaggaaaataattggtaaattttaaatagaaaaagttatttttttttaaatttcaatgcattgaatgcattatttccgagacaaa 36302158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 13311253 - 13311320
Alignment:
Q  115 acatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagtgaccggagggtgtat 180  Q
    |||| |||||||||||||||||||   |||||  | ||||| |||||||||||||||| |||||||||    
T  13311253 acatacatcattaattgaatgtatctaaaagatagatttttacttatattagtgaccgaagggtgtat 13311320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 14571105 - 14571049
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  14571105 ttcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatg 14571049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 15965999 - 15966055
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||| || | ||||||| ||||||||||||||||    
T  15965999 ttcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatg 15966055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 15966740 - 15966684
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| | ||||||| ||||||||||||||||    
T  15966740 ttcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaatg 15966684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 15966686 - 15966742
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||| ||  |||||||| ||||||||||||||||    
T  15966686 ttcaattaatgatgtatgtggtttatattatggaccacatacatcattaattgaatg 15966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 18942029 - 18942085
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||| ||    |||||| ||||||||| ||||||||||||||||    
T  18942029 ttcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaatg 18942085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 30893819 - 30893875
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||| ||||||||||||  | || |||||||||||||| ||||||| ||||||||    
T  30893819 ttcaataaatgatgtatgttgcctacaataaagaccacatacatcatttattgaatg 30893875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 38860897 - 38860841
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  38860897 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 38860841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 38860843 - 38860899
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  38860843 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 38860899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 40262500 - 40262612
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagtgg-tttttgcttatattagtg 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||    
T  40262500 ttttagatatattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattaaatgtatttaa-agtggatttttgcttatattagtg 40262598  T
Q  167 accggagggtgtat 180  Q
    ||||||||||||||    
T  40262599 accggagggtgtat 40262612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 6065493 - 6065607
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  6065493 ttttagatacattcaattaatgatggatgtgacatataataaggaccacatacatcattaattgaatgtatctaaagagtggatttttgcttatattagt 6065592  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  6065593 gaccggagggtgtat 6065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 37734790 - 37734920
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  ||| |||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||| ||    
T  37734790 aagcaaaaattcacttttaagatacattcaattaatgatgtatgtgacatataataaagaccgcatacatcattaattgaatgtatctaaaaagtggatt 37734889  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||    
T  37734890 tttgcttatattagtgaccggagggtgtatt 37734920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 8257960 - 8258088
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||  ||    
T  8257960 aagcaaaaattcactttttagatacattcaattaataatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaatt 8258059  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  8258060 tttgcttatattagtgaccggagggtgta 8258088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 48022718 - 48022589
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  ||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||    
T  48022718 aagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatt 48022619  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  48022618 tttgcttatattagtgaccggagggtgtat 48022589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 639922 - 639794
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  ||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||    
T  639922 aagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatt 639823  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  639822 tttgcttatattagtgaccggagggtgta 639794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 33604034 - 33604137
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  33604034 ttcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccggagggt 33604133  T
Q  177 gtat 180  Q
    ||||    
T  33604134 gtat 33604137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 31008367 - 31008253
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||| ||| | |||||||||||||||||    
T  31008367 ttttagatacattcaattaatgatgtatgtaacatataataaagaccacatacatcattaattaaatgtatctaaaaagtagatttttgcttatattagt 31008268  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  31008267 gaccggagggtgtat 31008253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 27206866 - 27206754
Alignment:
Q  69 tttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtg 166  Q
    ||||||||  |||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  27206866 tttagatacattcaattaatgatgtatgcgacatataataaagactacatacatcattaattgaatgtatctaaaaagtggttttttgcttatattagtg 27206767  T
Q  167 accggagggtgta 179  Q
     ||||||||||||    
T  27206766 gccggagggtgta 27206754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 5856400 - 5856502
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| ||||| ||||| ||||||||||||||||||| |||| |||    
T  5856400 ttcaattaatgatgtacgtgacatataataaagaccacatacataattaattgaatgtatttaaaaagtggatttttgcttatattagtgatcggatggt 5856499  T
Q  177 gta 179  Q
    |||    
T  5856500 gta 5856502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 3384240 - 3384368
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||| ||||  ||    
T  3384240 aagcaaaaattcactttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcatcaattgaatgtatctaaaaagtgaatt 3384339  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||  ||||||||||||||||||| ||||    
T  3384340 tttatttatattagtgaccggaggatgta 3384368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 35367601 - 35367520
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||  || |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35367601 aagcaaaaatccattttttagatacattcaattaatgatgtatgtgacatattataaagaccacatgcatcattaattgaat 35367520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 25129864 - 25129962
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||| ||||| |||||||||||||||||||||  |||||||||||||||  |||||||| | ||||||||||| || ||||||||| |||||||||||    
T  25129864 aaataattgatgaattttaagtagaaaaagttacattttaaagtttcaatgcattgaatgcaccatttccaagataacatttcttctttagtcttctta 25129962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 4602676 - 4602789
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||| |||||||||||||||||| |||||||  |||||||||||||||||| |||| | ||  ||||| |||||||||||    
T  4602676 ttttagatacattcaattaatgatatatgtgacatataataaataccacatatatcattaattgaatgtatctaaaaaatgaatttttacttatattagt 4602775  T
Q  166 gaccggagggtgta 179  Q
    ||||||||| ||||    
T  4602776 gaccggaggttgta 4602789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 15439882 - 15440007
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt-aaagagtgg-ttttt 153  Q
    ||||||| ||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||   |||||    
T  15439882 caaaaatctattttgtagatacattcaattaatgatatatgtgacatataataaagaccacatacattattaattgaatgtatttaaaaagtcaattttt 15439981  T
Q  154 gcttatattagtgaccggagggtgta 179  Q
    |||||||||| | |||| ||||||||    
T  15439982 gcttatattaataaccgaagggtgta 15440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 1609823 - 1609708
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||| || |||||| ||||||||||||||||||||||| |||  |||||| ||||||||| |||||||| ||||||| |||||||||| || |||| |    
T  1609823 tacaaagataaaaataattgataaattttaagtagaaaaaattacattttaa-gtttcaatacattgaatgcatcattttcaagacaaaagttgttcttt 1609725  T
Q  292 agtcttcttaataagtg 308  Q
    | ||||||||| |||||    
T  1609724 aatcttcttaacaagtg 1609708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 2349788 - 2349858
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||||||  |||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  2349788 ttttagatacattcaattaatgatgcatgtgacatataataaagactacatacatcattaattgaatgtat 2349858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 34658403 - 34658489
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    ||||||||||| |  ||| |||||  || ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34658403 aagcaaaaattcacttttcagatacatttaattaatgatgtatgtgacatataataaagaccacatacattattaattgaatgtatt 34658489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 14418180 - 14418099
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||| |  |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  14418180 aagcaaaaattcactttttagatacattcaactaatgatgtatgtgacatataataaagaccacatacatcattaatagaat 14418099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 4060294 - 4060166
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||| ||  |||||||||  || || ||||||||||| ||| ||||||||||||||||||  || ||||||||||| ||| |||| ||||| ||    
T  4060294 aagcaaaaatctactttttagatacatttaactaatgatgtatttgagatataataaagaccacatatattattaattgaatatatctaaaaagtggatt 4060195  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||| ||| |||||    
T  4060194 tttgcttatattagtgaccagagtgtgta 4060166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 2352927 - 2353041
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||| |||| |||||||||||||||| ||||| ||||||||||| ||||||| |||| | |   |||||||||||||||||    
T  2352927 ttttagatacattcaattaatgacgtatttgacatataataaagagcacatacatcattaattaaatgtatctaaaaaataaatttttgcttatattagt 2353026  T
Q  166 gaccggagggtgtat 180  Q
    || |||| |||||||    
T  2353027 gatcggaaggtgtat 2353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 308
Target Start/End: Original strand, 36995238 - 36995355
Alignment:
Q  192 tacaaaaatgaaaatagttgataaatttt-aagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctc 290  Q
    |||||||||| ||||| ||| |||||||| |||||||||||||||  || |||| |||||||  |||||||| | ||||||||| ||||||||||||||     
T  36995238 tacaaaaatggaaataattggtaaatttttaagtagaaaaagttactttataaaatttcaatgcattgaatgcaccatttccaaaacaaaatttcttctt 36995337  T
Q  291 tagtcttcttaataagtg 308  Q
    | | |||||||| |||||    
T  36995338 tggacttcttaacaagtg 36995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 17490559 - 17490479
Alignment:
Q  105 aataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtattat 183  Q
    ||||||||||||||  |||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||| ||||||    
T  17490559 aataaagaccacatatatcattaattaaatgtatctaaaaagtggatttttgcttatattagtgaccggagggtctattat 17490479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 39216146 - 39216245
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagtggtttttgcttatattagtgaccggagggtgt 178  Q
    |||||||||||||||||||    |||||||||||| | || |||||||||||||||| ||  ||||   ||||||||||||| |||||||||||||||||    
T  39216146 ttcaattaatgatgtatgttgtctataataaagactatatacatcattaattgaatgaatataagat--gtttttgcttataatagtgaccggagggtgt 39216243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 45115187 - 45115316
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| |||||| | | |||| |||||||| ||||||   ||||||||||||||  ||||||||||| |||||| || ||||  || | ||    
T  45115187 aagcaaaaatctatattttaggtttattcatttaatgatatatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatt 45115286  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||| |||||||||||||||||||    
T  45115287 tttgcttataatagtgaccggagggtgtat 45115316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 6283632 - 6283525
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggttttt-gcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| |  ||||  || |||||| |||||||||||||||||||||||    
T  6283632 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 6283533  T
Q  177 gtattatt 184  Q
    ||| ||||    
T  6283532 gtagtatt 6283525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 31008338 - 31008405
Alignment:
Q  115 acatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    |||| ||||||||||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||||    
T  31008338 acatacatcattaattgaatgtatctaaaaagtggatttttgcttatattaatgaccggagggtgtat 31008405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 23944101 - 23944031
Alignment:
Q  112 accacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||| ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||||||    
T  23944101 accacatacatcattaattgaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggtgtat 23944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 27206843 - 27206905
Alignment:
Q  120 catcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||    
T  27206843 catcattaattgaatgtatctaaatagttgatttttgcttatattagtgaccggagggtgtat 27206905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 2748663 - 2748566
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttct 289  Q
    |||||||||  ||||| ||||||||||||||||| ||||| |||  ||| |||||||||||  |||||||  | |||||  |||||||||||||||||    
T  2748663 tacaaaaatagaaataattgataaattttaagtaaaaaaaattacttttcaaagtttcaatgcattgaattcaccatttttaagacaaaatttcttct 2748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 3384331 - 3384218
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||| |||||||||||||  | || || |   ||||| ||||||||||||||||||| |||| ||||  ||||||||||||||| |    
T  3384331 ttttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattaat 3384232  T
Q  166 gaccggagggtgta 179  Q
    ||||||||||||||    
T  3384231 gaccggagggtgta 3384218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 34954019 - 34953891
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtt 150  Q
    |||||||||||||| ||||||||   ||||||||||||||||| ||   | || || ||||||||| ||||||| | |||||| |||  ||| | || ||    
T  34954019 aagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaaatattgatt 34953920  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||| ||||||| ||||||||||    
T  34953919 tttgcttataatagtgactggagggtgta 34953891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 6065523 - 6065455
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtggt-ttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||||||| |||| ||| |  |||||||||||||||||||||||||||||||    
T  6065523 cacatccatcattaattgaatgtatctaaaaagtagaattttgcttatattagtgaccggagggtgtat 6065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 8258066 - 8257938
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  |||||||||  ||||||||||||||||||||   | || || |   ||||| ||| ||||||||||||||| |||| ||||  ||    
T  8258066 aagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaattgaatgtatctaaaaagtgaatt 8257967  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||||||||||||||    
T  8257966 tttgcttatatttgtgaccggagggtgta 8257938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 8472364 - 8472455
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtctt 297  Q
    ||||| |||||||||||||||||||||||||||     ||||||||||||   ||||||| | |||||||||||||| ||||||||  |||||||    
T  8472364 aaataattgataaattttaagtagaaaaagtta---cataaagtttcaatgctttgaatgcaccatttccaagacaacatttcttcattagtctt 8472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 31909846 - 31909790
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  31909846 ttcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatg 31909790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 52253581 - 52253637
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  ||| |||||||||||||||||||||    
T  52253581 ttcaattaatgatgtatgtgatttataatatggactacatgcatcattaattgaatg 52253637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 35367556 - 35367623
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    ||||| ||||||||||||||||||| |||| | ||| |||||||||||| ||||||||||||||||||    
T  35367556 cacatacatcattaattgaatgtatctaaaaaatggatttttgcttatagtagtgaccggagggtgta 35367623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 36040189 - 36040292
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttt-tgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| |  ||||  || ||||| ||||||||||||||||||||||||    
T  36040189 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 36040288  T
Q  177 gtat 180  Q
    ||||    
T  36040289 gtat 36040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 1035930 - 1036032
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    |||||| |||||||||||| || |||||| || ||  |||  ||||||||||||||| || || | ||||  ||||||||||||||||||||||||||||    
T  1035930 ttcaataaatgatgtatgttacctataattaaaactgcataaatcattaattgaatgaatctagaaagtgaatttttgcttatattagtgaccggagggt 1036029  T
Q  177 gta 179  Q
    |||    
T  1036030 gta 1036032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 15259494 - 15259536
Alignment:
Q  424 gtttaccatattgggcataggataagagtttcttttctgtttt 466  Q
    |||||||||| |||||||||| |||||||||||||||||||||    
T  15259494 gtttaccatactgggcataggctaagagtttcttttctgtttt 15259536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 15646982 - 15646912
Alignment:
Q  238 ttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagtg 308  Q
    |||||||||||||||  ||| |||| | |||||||||||||||||||||||| || |||| |||| |||||    
T  15646982 ttttaaagtttcaatgcattcaatgcaccatttccaagacaaaatttcttctttaatctttttaacaagtg 15646912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 26724396 - 26724339
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    ||||||||||||| ||||||||||||||| | ||||| ||| |||||||| |||||||    
T  26724396 aaaaatgaaaataattgataaattttaagcacaaaaacttaccttttaaaatttcaat 26724339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 26732513 - 26732456
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    ||||||||||||| ||||||||||||||| | ||||| ||| |||||||| |||||||    
T  26732513 aaaaatgaaaataattgataaattttaagcacaaaaacttaccttttaaaatttcaat 26732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 36271297 - 36271192
Alignment:
Q  202 aaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    |||||| ||||||| ||| | ||||||||| |||| ||  |||||||||||  |||||||||||||||  ||| ||||| ||| |||| ||| |||||||    
T  36271297 aaaataattgataagtttcatgtagaaaaaattattttccaaagtttcaatgcattgaatgtatcattcacaaaacaaagtttattctttagacttctta 36271198  T
Q  302 ataagt 307  Q
    | ||||    
T  36271197 acaagt 36271192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 14418135 - 14418203
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| |||||||| |||||||||| |||| ||||  ||||||||||||||| ||||||||||||||||    
T  14418135 cacatacatcattagttgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggtgtat 14418203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 28725581 - 28725613
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  28725581 tttttgcttatattagtgaccggagggtgtatt 28725613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 38824334 - 38824390
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| ||||||||| ||||||||||||||||    
T  38824334 ttcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaatg 38824390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 47011341 - 47011285
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  ||||||||  |||||||||||||||    
T  47011341 ttcaattaatgatgtatgtgatttataatatggaccacatatatcattaattgaatg 47011285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 2349818 - 2349751
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||||||||| |||| | ||| |||||| |||||||||||||| ||| |||||    
T  2349818 cacatgcatcattaattgaatgtatctaaaaaatggatttttgtttatattagtgaccagagagtgta 2349751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 4682969 - 4683036
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| | ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  4682969 ttttagatttattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 4683036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 29302089 - 29302058
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  29302089 tttttgcttatattagtgaccggagggtgtat 29302058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 29302180 - 29302211
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  29302180 tttttgcttatattagtgaccggagggtgtat 29302211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 31634489 - 31634434
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||| |||||||||  |||||||  |||||||| |||||||||||||||    
T  31634489 ttcaattaatgttgtatgtgatttataatatggaccacatacatcattaattgaat 31634434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 33939340 - 33939443
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||    ||||||||||| |||||||||||||||    
T  33939340 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggt 33939439  T
Q  177 gtat 180  Q
    ||||    
T  33939440 gtat 33939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 36040171 - 36040140
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  36040171 tttttgcttatattagtgaccggagggtgtat 36040140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 41161580 - 41161611
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  41161580 tttttgcttatattagtgaccggagggtgtat 41161611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 48022710 - 48022741
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  48022710 tttttgcttatattagtgaccggagggtgtat 48022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 639914 - 639944
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  639914 tttttgcttatattagtgaccggagggtgta 639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 4060286 - 4060316
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  4060286 tttttgcttatattagtgaccggagggtgta 4060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 5852731 - 5852789
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta 137  Q
    ||||||||||||||||||||   |||||||  |||||||| |||||||| |||||||||    
T  5852731 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgta 5852789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 15351732 - 15351814
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||| ||||| ||   |||||| ||||||||||||    || |||||||||||||| ||||||| ||||||||    
T  15351732 aagcaaaaatttatattttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatg 15351814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 18407557 - 18407466
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttctt 287  Q
    |||||||  ||||| |||||||  |||| |||||||||  ||  |||||||||||||||| |||||||||||||||  ||| ||||| ||||||    
T  18407557 caaaaatctaaataattgataa--tttatgtagaaaaaaatactttttaaagtttcaatacattgaatgtatcattctcaaaacaaagtttctt 18407466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 23575342 - 23575312
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  23575342 tttttgcttatattagtgaccggagggtgta 23575312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 28725491 - 28725461
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  28725491 tttttgcttatattagtgaccggagggtgta 28725461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 33939322 - 33939292
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  33939322 tttttgcttatattagtgaccggagggtgta 33939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 46518042 - 46517984
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta 137  Q
    ||||||||||||||||||||   |||||||  |||||||| |||||||| |||||||||    
T  46518042 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgta 46517984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 2353018 - 2352973
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtg 98  Q
    |||||||||||||| |||||||||  || |||||||||||||||||    
T  2353018 aagcaaaaatttattttttagatacatttaattaatgatgtatgtg 2352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 15647299 - 15647258
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagtta 235  Q
    |||||||| ||||| || ||||||||||||||||||||||||    
T  15647299 caaaaatggaaataatttataaattttaagtagaaaaagtta 15647258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 23944054 - 23944099
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtg 98  Q
    ||||||||||| || |||||||||  ||||||||||||||||||||    
T  23944054 aagcaaaaattcattttttagatacattcaattaatgatgtatgtg 23944099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 24478759 - 24478706
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||   ||||||| |||||||||  |||||||||||||||    
T  24478759 aattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatg 24478706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 34953946 - 34953995
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||   |||||||||||||| || ||||||||||||||||    
T  34953946 aatgatgtatgtggtctataataaagaccatatacatcattaattgaatg 34953995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 43384597 - 43384524
Alignment:
Q  62 tttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||   |||||| ||| |||||||||   |||| || ||||||||| ||||||||||||||||    
T  43384597 tttatcttttagattcattcaatcaattatgtatgtggtttatattatagaccacatacatcattaattgaatg 43384524  T

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Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 8466018 - 8465974
Alignment:
Q  84 ttaatgatgtatgtgacatataataaagaccacatgcatcattaa 128  Q
    |||||||||||||||   ||||||||||||||||| |||||||||    
T  8466018 ttaatgatgtatgtggtctataataaagaccacatacatcattaa 8465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 8751529 - 8751473
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||| | | ||||||| ||||||||||||||||    
T  8751529 ttcaattaatgatgtatgtggtttataacataaaccacatacatcattaattgaatg 8751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 14214575 - 14214543
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||||    
T  14214575 tttttgcttataatagtgaccggagggtgtatt 14214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 14214643 - 14214675
Alignment:
Q  148 gtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||| |||||||||||||||||||    
T  14214643 gtttttgcttataatagtgaccggagggtgtat 14214675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 15278662 - 15278606
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||| ||||| ||||||||| ||||||    
T  15278662 ttcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatg 15278606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 15278608 - 15278664
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| ||||||||||||||||  |||| || | ||||||| ||||||||||||||||    
T  15278608 ttcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatg 15278664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 21321376 - 21321412
Alignment:
Q  94 atgtgacatataataaagaccacatgcatcattaatt 130  Q
    |||||||||||||||||||||| || |||||||||||    
T  21321376 atgtgacatataataaagaccatatacatcattaatt 21321412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 23575361 - 23575417
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||   ||||||||||| || |||||||||||| ||||||    
T  23575361 ttcatttaatgatgtatgtggtctataataaagatcatatgcatcattaaatgaatg 23575417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 25378300 - 25378356
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  25378300 ttcaattaatgatgtatgtggttcataatattgaccacatacatcattaattgaatg 25378356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 27549142 - 27549086
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  27549142 ttcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatg 27549086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 31909792 - 31909848
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||| || | ||||||| ||||||||||||||||    
T  31909792 ttcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatg 31909848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 33738260 - 33738208
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattg 131  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||    
T  33738260 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattg 33738208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 35050029 - 35049973
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||| ||| |||  ||||||| ||| ||||| ||||||||||||||||    
T  35050029 ttcaattaatgatatatatgatttataatatagatcacatacatcattaattgaatg 35049973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 37255223 - 37255167
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  37255223 ttcaattaatgatgtatgtggttaataatatggaccacatacatcattaattgaatg 37255167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 38847399 - 38847343
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||   ||||||| ||||||||| ||||||||| ||||||    
T  38847399 ttcatttaatgatgtatgtggtttataatatagaccacatacatcattaaatgaatg 38847343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 39015660 - 39015604
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  39015660 ttcaattaatgatgtatgtggttcataatattgaccacatacatcattaattgaatg 39015604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 40262530 - 40262462
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||| ||| |||| | ||| |||||| |||||||||||||||||| ||||||    
T  40262530 cacatacatcattaattgaatatatctaaaaactggatttttgtttatattagtgaccggagagtgtat 40262462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 44698119 - 44698067
Alignment:
Q  209 ttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaat 261  Q
    ||||||||||||| || ||||||||||  |||||| |||||||||| ||||||    
T  44698119 ttgataaattttatgttgaaaaagttactttttaatgtttcaatatgttgaat 44698067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 45925341 - 45925257
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttttgcttatatt 162  Q
    |||| |||||||||||||||    |||||| ||||||||| ||||||||| |||||| || |||| ||||  |||||||||||||    
T  45925341 ttcatttaatgatgtatgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaagtgaattttgcttatatt 45925257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 48605167 - 48605111
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   ||| ||  |||||||| ||||||||||||||||    
T  48605167 ttcaattaatgatgtatgtgattcatattatggaccacatacatcattaattgaatg 48605111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 43426751 - 43426623
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtgg-tt 150  Q
    |||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||    
T  43426751 aagcaaaaatttattttttagatacattcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgtatttaaaaagtggatt 43426652  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||| |||||||||||||||| ||||||||    
T  43426651 tttacttatattagtgaccgaagggtgta 43426623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 38594467 - 38594338
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| |||||||| | ||    
T  38594467 aagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgtatctaaagagtagatt 38594368  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  38594367 tttgcttatattagtgaccggagggtgtat 38594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 38598063 - 38597934
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| |||||||| | ||    
T  38598063 aagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgtatctaaagagtagatt 38597964  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  38597963 tttgcttatattagtgaccggagggtgtat 38597934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 5574153 - 5574256
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||    
T  5574153 ttcaattaatgatatatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggt 5574252  T
Q  177 gtat 180  Q
    ||||    
T  5574253 gtat 5574256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 32838637 - 32838747
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||||  |||||||| |||||||||||||||||||||||||| |    
T  32838637 tacaaaaatgaaaataattgataaattttaaatagaaaatgttacattttaaagtttcaatgcattgaatgcatcatttccaagacaaaatttcttcttt 32838736  T
Q  292 agtcttcttaa 302  Q
    | | |||||||    
T  32838737 aattttcttaa 32838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 1981092 - 1980979
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaaga-gtggt-ttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| || | ||||  ||||||||||||||||    
T  1981092 ttttagatacattcaattaatgatgtatgtgacatataataaag-ccacataaatcattaattgaatgtatttaaaatgtggaattttgcttatattagt 1980994  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  1980993 gaccggagggtgtat 1980979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 196 - 309
Target Start/End: Original strand, 19002758 - 19002871
Alignment:
Q  196 aaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtc 295  Q
    |||||||||||| ||||||||||||||||||||||| |||  ||||||| |||||||  |||||||| | ||||||||||||||| |||||||| |||||    
T  19002758 aaaatgaaaataattgataaattttaagtagaaaaatttactttttaaaatttcaatgcattgaatgcaccatttccaagacaaagtttcttctttagtc 19002857  T
Q  296 ttcttaataagtgt 309  Q
    || |||| ||||||    
T  19002858 tttttaacaagtgt 19002871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 30902290 - 30902407
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    ||||||||||| || ||||| |||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||   ||    
T  30902290 aagcaaaaattcattttttaaatacattcaattaatgatgtatgtgacatataataaagaccacatatatcattaattgaatgtatctaaaaagtaaatt 30902389  T
Q  151 tttgcttatattagtgac 168  Q
    ||||||||||||||||||    
T  30902390 tttgcttatattagtgac 30902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 22373627 - 22373758
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt--ggt 149  Q
    |||||||||| ||| ||||| |||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||| |||| | |  | |    
T  22373627 aagcaaaaatatattttttaaatatattcaattaatgatgtatataacatataataaagaccacatacatcattaactgaatgtatctaaaaaattagat 22373726  T
Q  150 ttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||| |||| ||||||||    
T  22373727 ttttgcttatattagtgagcggaaggtgtatt 22373758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 34248523 - 34248407
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| |||| ||||  |||||||||||||||||    
T  34248523 ttttagatacattcaattaatgatgtatctgacatataataaagacaacatacatcattaattgaatgtatctaaaaagtgaatttttgcttatattagt 34248424  T
Q  166 gaccggagggtgtatta 182  Q
    |||  ||| ||||||||    
T  34248423 gactagagagtgtatta 34248407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 3887941 - 3887826
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||| | | | |||||||||||||||||    
T  3887941 ttttagatacattcaattaatgatgtatgtgacatataataaagactacataaatcattaattgaatgtatctaaaaaatagatttttgcttatattagt 3887842  T
Q  166 gaccggagggtgtatt 181  Q
    || | |||||||||||    
T  3887841 gatcagagggtgtatt 3887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 25278191 - 25278320
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||||| ||||||||||  || |||||||||||||||||| | ||||||||||||| |  || |||||||||||||||| |||||||||  ||    
T  25278191 aagcaaaaatttaccttttagatacatttaattaatgatgtatgtgatacataataaagaccataaacaacattaattgaatgtatataaagagtgaatt 25278290  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||| || |||||| |||||||||    
T  25278291 tttgcttatactaatgaccgaagggtgtat 25278320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 3714335 - 3714235
Alignment:
Q  54 agcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttt 152  Q
    |||||||||| |  |||||| ||| | ||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||||| |||| |||||||||    
T  3714335 agcaaaaattcactttttaggtatatccaattaatgatgtatgtgatatataataaagactacatacataattaattgaatgtatctaaaaagtggtttt 3714236  T
Q  153 t 153  Q
    |    
T  3714235 t 3714235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 41252763 - 41252862
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaag-ttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||| ||||| |||||||||||||||||  |||  |||||||||||||||  |||||||| |||||||||||||||| || |||||| |||||||||||    
T  41252763 aaataattgatgaattttaagtagaaaaaaattacattttaaagtttcaatgcattgaatgcatcatttccaagacaacatatcttctttagtcttctta 41252862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 6567022 - 6566910
Alignment:
Q  69 tttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtg 166  Q
    ||||||||| |||||||||||||||||| ||||||||||||| || | || ||| ||||||| ||| ||| |||| ||||  |||||||| |||||||||    
T  6567022 tttagatatattcaattaatgatgtatgcgacatataataaaaactatatacattattaattaaatatatctaaaaagtgattttttgctcatattagtg 6566923  T
Q  167 accggagggtgta 179  Q
    |||| ||||||||    
T  6566922 accgaagggtgta 6566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 20504351 - 20504243
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||  | || ||||||||||||||| ||| |||| ||| | |||||| ||||||||||    
T  20504351 ttttagatacattcaattaatgatgtatataacatataataaagattatatacatcattaattgaatatatctaaaaagtagatttttgtttatattagt 20504252  T
Q  166 gaccggagg 174  Q
    |||||||||    
T  20504251 gaccggagg 20504243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 38618217 - 38618146
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaa 128  Q
    |||||| ||| | |||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  38618217 aaaaatctatttgttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcattaa 38618146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 3887850 - 3887978
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagag-tggtt 150  Q
    |||||||||| ||| |||||||||  ||||||||||||| |||||    | || || |   ||||| ||||||||||||||||||| |||| || || ||    
T  3887850 aagcaaaaatctattttttagatacattcaattaatgatttatgtagtctttattatatgtcacatacatcattaattgaatgtatctaaaaagatgatt 3887949  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  3887950 tttgcttatattagtgaccggagggtgta 3887978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 19950209 - 19950112
Alignment:
Q  84 ttaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta--ttaaagagtggtttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||  |||||||||||||||  ||||||||||| | |||| |  | ||| |  | |||||||||||||||||||||||||||||||    
T  19950209 ttaatgatgtatgtggtatataataaagaccatgtgcatcattaaataaatgaacctaaaatatagttttttgcttatattagtgaccggagggtgta 19950112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 33847546 - 33847488
Alignment:
Q  243 aagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||||||||  |||||||| |||||||||||||||| ||||||||| |||||||||||    
T  33847546 aagtttcaatgcattgaatgcatcatttccaagacaacatttcttctttagtcttctta 33847488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 34248499 - 34248561
Alignment:
Q  120 catcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||||    
T  34248499 catcattaattgaatgtatctaaaaagtggatttttgcttatattagtgaccagagggtgtat 34248561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 752182 - 752267
Alignment:
Q  217 ttttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    ||||| ||||||||| |||  |||| |||||||||| | ||||||| |||| | ||||||||||||||||||| ||| ||||||||    
T  752182 ttttatgtagaaaaaattactttttcaagtttcaatgtgttgaatgcatcaatcccaagacaaaatttcttctttagacttcttaa 752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 38598018 - 38598087
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||| ||||||||||||||||||| |||| | | | |||||||||||||||||||||||||||||||||    
T  38598018 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtatt 38598087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 1388480 - 1388572
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaattt 284  Q
    ||||||||| |||||| | |||||||||||| || |||| ||||  |||||| |||| |||  |||||||||||||||| |||||||| ||||    
T  1388480 tacaaaaataaaaataatagataaattttaaataaaaaaggttactttttaatgttttaatgcattgaatgtatcattttcaagacaacattt 1388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 4898208 - 4898264
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  4898208 ttcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 4898264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 4945602 - 4945658
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||    
T  4945602 ttcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatg 4945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 38181777 - 38181909
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    ||||||||||  || ||||||||   |||| | ||||||||||||||  || ||||||||| | || |||||||||||||||| || ||||  || | ||    
T  38181777 aagcaaaaatcaatattttagattcattcattaaatgatgtatgtgatctacaataaagactatatacatcattaattgaatgaatgtaaaatgtagttt 38181876  T
Q  151 tttgcttatattagtgaccggagggtgtattat 183  Q
    |||||||||| |||| |||||||||||||||||    
T  38181877 tttgcttataatagtaaccggagggtgtattat 38181909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 38594422 - 38594490
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||||||| |||| | | | ||||||||||||||||||||||||||||||||    
T  38594422 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtat 38594490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 7837117 - 7837180
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattg 131  Q
    |||||||||  |||||||||||||  ||||||||||||||||||||||| | |||| |||||||    
T  7837117 ttttagatacattcaattaatgataaatgtgacatataataaagaccacgtacatctttaattg 7837180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 24457143 - 24457246
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttt-tgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| |  ||||  || ||||| ||||||||||||||||||||||||    
T  24457143 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaacataaaatgtagttttttgcttatattagtgaccggagggt 24457242  T
Q  177 gtat 180  Q
    ||||    
T  24457243 gtat 24457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 38721626 - 38721681
Alignment:
Q  198 aatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaata 253  Q
    |||||||||| |||||||||||||| || |||||||||  ||||||||||||||||    
T  38721626 aatgaaaataattgataaattttaaataaaaaaagttaatttttaaagtttcaata 38721681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 5574233 - 5574108
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatta-aagagtgg-tt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||||||||||   | || || |   |||||  |||||||||||||||||||  || ||||  ||    
T  5574233 aagcaaaaatctactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaatgtattttaaaagtgaatt 5574134  T
Q  151 tttgcttatattagtgaccggagggt 176  Q
    ||||||||||||||||||||||||||    
T  5574133 tttgcttatattagtgaccggagggt 5574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 10041588 - 10041641
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  10041588 aattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatg 10041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 26234067 - 26234172
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||    ||||||||||| |||||||||||||||    
T  26234067 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggt 26234166  T
Q  177 gtatta 182  Q
    ||||||    
T  26234167 gtatta 26234172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 37195142 - 37195046
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||   |||||||||||||| || ||||||||||||| || ||   ||| | |   |||||||||||||||||||||||||||||||    
T  37195142 aatgatgtatgtggtctataataaagaccatatacatcattaattgagtgaatctaaaatattaacttttgcttatattagtgaccggagggtgtat 37195046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 4640288 - 4640196
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttctt 287  Q
    ||||||||||||| || |||| ||||| ||||||||||| |  ||||||| ||||||  | ||||||| ||||||  ||||||| ||||||||    
T  4640288 aaaaatgaaaataatttataagttttacgtagaaaaagtaactttttaaattttcaacgtgttgaatgcatcattctcaagacataatttctt 4640196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 6566999 - 6567055
Alignment:
Q  120 catcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagg 174  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||    
T  6566999 catcattaattgaatatatctaaatagtggatttttgcttatattagtgaccggagg 6567055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 19613038 - 19612935
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||| || |  ||||||||||| |||||| ||   ||| |  | ||||||||||||||||||||||||||||    
T  19613038 ttcatttaatgatgtatgtggtctataataaaaactatgtgcatcattaaatgaatgaatctaaaatatagatttttgcttatattagtgaccggagggt 19612939  T
Q  177 gtat 180  Q
    ||||    
T  19612938 gtat 19612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 20195332 - 20195388
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   ||||||  |||||||| ||||||||||||||||    
T  20195332 ttcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatg 20195388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 24457125 - 24457093
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  24457125 tttttgcttatattagtgaccggagggtgtatt 24457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 26234049 - 26234017
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  26234049 tttttgcttatattagtgaccggagggtgtatt 26234017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 2060229 - 2060198
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  2060229 tttttgcttatattagtgaccggagggtgtat 2060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 2060617 - 2060648
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  2060617 tttttgcttatattagtgaccggagggtgtat 2060648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 8740616 - 8740513
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  || | |||||||||||| ||||||| ||| |||    
T  8740616 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgactggatggt 8740517  T
Q  177 gtat 180  Q
    ||||    
T  8740516 gtat 8740513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 11726618 - 11726491
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggttt 151  Q
    ||||||||||| |  ||||||||   |||| | ||||||||||||||   ||||||||||  | || ||||||| |||||||| || ||||  ||  |||    
T  11726618 aagcaaaaattaacattttagattcattcattaaatgatgtatgtgatccataataaagattatatacatcattgattgaatgaatctaaaatgttattt 11726519  T
Q  152 ttgcttatattagtgaccggagggtgta 179  Q
    ||||||||| ||||||||||||||||||    
T  11726518 ttgcttataatagtgaccggagggtgta 11726491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 21488150 - 21488068
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||| |||  ||||||||   |||| |||||||||||||||   ||||||||||||||  ||||||||||| ||||||    
T  21488150 aagcaaaaaattacattttagattcattcatttaatgatgtatgtggtttataataaagaccatgtgcatcattaaatgaatg 21488068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 115
Target Start/End: Complemental strand, 4563954 - 4563925
Alignment:
Q  86 aatgatgtatgtgacatataataaagacca 115  Q
    ||||||||||||||||||||||||||||||    
T  4563954 aatgatgtatgtgacatataataaagacca 4563925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 10099598 - 10099651
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||   ||||||| |||||||||  |||||||||||||||    
T  10099598 aattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatg 10099651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 11153295 - 11153246
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||   |||||||||| |||||| ||||||||||||||||    
T  11153295 aatgatgtatgtggtctataataaagcccacatacatcattaattgaatg 11153246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 26003485 - 26003534
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||   ||||||||||||||| || ||||||||||||||||    
T  26003485 aatgatgtatgtagtatataataaagaccatatacatcattaattgaatg 26003534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 34911124 - 34911197
Alignment:
Q  62 tttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||| |||||| | | ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  34911124 tttattttttaggtttattcaattaatgatgtatgtggttcataatatcgaccacatacatcattaattgaatg 34911197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 5144311 - 5144367
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||| ||||    
T  5144311 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 5144367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 9709701 - 9709757
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| |||||||| |||||||    
T  9709701 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatg 9709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 11477054 - 11477086
Alignment:
Q  238 ttttaaagtttcaatatattgaatgtatcattt 270  Q
    ||||||||||||||| |||||||||||||||||    
T  11477054 ttttaaagtttcaatgtattgaatgtatcattt 11477086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 12440673 - 12440729
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| ||||||||||||  ||||||| ||||||| | ||||| ||||||||||    
T  12440673 ttcaattattgatgtatgtgatttataatatagaccacgtacatcactaattgaatg 12440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 17843994 - 17844050
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||| ||   |||||||  |||||||| ||||||||||||||||    
T  17843994 ttcaattaatgatgtatatggtttataatatggaccacatacatcattaattgaatg 17844050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 26229471 - 26229435
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtattatta 185  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  26229471 tttttgcttataatagtgaccggagggtgtatgatta 26229435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 29712530 - 29712585
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  29712530 ttcaattaatgatgtatgtggtttataatag-gaccacatacatcattaattgaatg 29712585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 37396247 - 37396303
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||| |||  |||| || ||||||||| ||||||| ||||||||    
T  37396247 ttcaattaatgatgtatatgatttatattatagaccacatacatcattgattgaatg 37396303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 38465814 - 38465782
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||||    
T  38465814 tttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 40349691 - 40349639
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaa 244  Q
    |||||||||||||||| | | ||||||||||||| |||||||||  |||||||    
T  40349691 tacaaaaatgaaaataatcggtaaattttaagtaaaaaaagttaatttttaaa 40349639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 43514799 - 43514855
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| |||||| || ||||||||||||||||    
T  43514799 ttcaattaatgatgtatgtggttcataatatagaccatatacatcattaattgaatg 43514855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 38238907 - 38238777
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg--gt 149  Q
    |||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||   |    
T  38238907 aagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaaat 38238808  T
Q  150 ttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||||||||||||||||||||    
T  38238807 ttttgcttatattagtgaccggagggtgtat 38238777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 34703460 - 34703589
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |   ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||| ||||  ||    
T  34703460 aagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaatgtatctaaaaagtgaatt 34703559  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  34703560 tttgcttatattagtgaccggagggtgtat 34703589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 25079315 - 25079202
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  25079315 ttttagatacattcaattaatgatgtatgtgacatataataaggatcacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 25079216  T
Q  166 gaccggagggtgta 179  Q
    ||||||||| ||||    
T  25079215 gaccggaggatgta 25079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 173
Target Start/End: Original strand, 40416923 - 40417045
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |   ||||||||  |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||| ||||  ||    
T  40416923 aagcaaaaattcacaatttagatacattcaattaatgatgcatgtgacatataataaagaccatatacatcattaattgaatgtatctaaaaagtgaatt 40417022  T
Q  151 tttgcttatattagtgaccggag 173  Q
    |||||||||||||||||||||||    
T  40417023 tttgcttatattagtgaccggag 40417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 1706854 - 1706967
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttg 154  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||| | ||  ||||||    
T  1706854 aaaaatttattttttagatacattcaattaatgatgtatgtgacatataataaagaccatatacatcattaaatgaatgtatctaaaaaatgaatttttg 1706953  T
Q  155 cttatattagtgac 168  Q
    ||||||||||||||    
T  1706954 cttatattagtgac 1706967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 45000618 - 45000746
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| || ||||||  ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||| | |||| |||   ||    
T  45000618 aagcaaaaatctattttctagatacattcaattaatgatgtgtgtgacatataataaagaccacatacatcatcaattgaatgtgtctaaaaagtacatt 45000717  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||| ||||||||    
T  45000718 tttgcttatattagtgaccgaagggtgta 45000746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 22106775 - 22106672
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| | | | |||||||||||||||||    
T  22106775 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagt 22106676  T
Q  166 gacc 169  Q
    ||||    
T  22106675 gacc 22106672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 40529576 - 40529679
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| | | | |||||||||||||||||    
T  40529576 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaaaaaatagatttttgcttatattagt 40529675  T
Q  166 gacc 169  Q
    ||||    
T  40529676 gacc 40529679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 29498906 - 29498776
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||  || |||||||||  || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||  |||| ||    
T  29498906 aagcaaaaatccattttttagatacatttaattaattatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaaaatgtggatt 29498807  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    ||||||||||||| ||| |||||||| ||||    
T  29498806 tttgcttatattattgatcggagggtttatt 29498776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 4406509 - 4406422
Alignment:
Q  84 ttaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgacc 169  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| ||||  ||||||| |||||||||||||    
T  4406509 ttaatgatgtatgtgacatataataaagacaacatacatcattaattgaatgtatctaaaaagtgaatttttgcatatattagtgacc 4406422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 23828904 - 23829002
Alignment:
Q  204 aatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    |||||||||||||| |||||||||||| ||||  || |||| |||||||| |||||||| |||||||  ||||||||| ||||||| ||||||||||||    
T  23828904 aatagttgataaatgttaagtagaaaatgttactttctaaaatttcaatacattgaatgcatcatttttaagacaaaacttcttctttagtcttcttaa 23829002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 38912906 - 38913004
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||| |||||||||||||| ||||||||||| | |||||||||||||||  |||||||| | |||||||||||||| |||| |||| || ||||||||    
T  38912906 aaataattgataaattttaaatagaaaaagttgtattttaaagtttcaatgcattgaatgcaccatttccaagacaacatttattctttaatcttctta 38913004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 138
Target Start/End: Complemental strand, 27554620 - 27554535
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||||||||||  ||| | |||  ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  27554620 aagcaaaaatttacttttaaaatacattcaattaatgatgtatgtgatatataataaagatcacatacatcattaattgaatgtat 27554535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 5909182 - 5909067
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctag 293  Q
    ||||||| |||||| ||||||| ||||| ||  |||||||||| ||| ||||||||||   |||||||| |||| |||||||||||| |||||||| |||    
T  5909182 caaaaataaaaataattgataatttttatgttaaaaaagttatttttcaaagtttcaaggcattgaatgcatcacttccaagacaaagtttcttctttag 5909083  T
Q  294 tcttcttaataagtgt 309  Q
     |||||||| ||||||    
T  5909082 acttcttaacaagtgt 5909067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 22281475 - 22281546
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||  |||| ||||||||||| ||||||||    
T  22281475 ttttagatatattcaattaatgatgtatatgacatataataaagagtacattcatcattaattcaatgtatt 22281546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 25874360 - 25874459
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    ||||| |||||||||||||||||||| | ||||  ||||||||||||||||||||||||| || |||| |||  ||||||||||||| | || |||||||    
T  25874360 aaataattgataaattttaagtagaacatgttacattttaaagtttcaatatattgaatgcattattttcaaatcaaaatttcttctttggttttcttaa 25874459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 716266 - 716336
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||||||  ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  716266 ttttagatacattcaattaatgatgtatatgacatagaataaagatcacatacatcattaattgaatgtat 716336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 24936576 - 24936678
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccggagggt 176  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||  |||||  |||||||||| |||||||| |    
T  24936576 ttcaattaattatgtctgtgacatataataaagaccacatacatcattaattgaatatatctaaaaagtgaatttttatttatattagtaaccggaggat 24936675  T
Q  177 gta 179  Q
    |||    
T  24936676 gta 24936678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 21275621 - 21275738
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagt 294  Q
    ||||||||||||| |||||| |||||||||||||||||||   ||||||| ||| |||  |||||||| | | |||| |||||||| |||||||| ||      
T  21275621 aaaaatgaaaataattgatatattttaagtagaaaaagttgctttttaaaattttaatgcattgaatgcaccttttctaagacaaactttcttctttaag 21275720  T
Q  295 cttcttaataagtgttct 312  Q
    |||||||| |||||||||    
T  21275721 cttcttaagaagtgttct 21275738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 27554518 - 27554643
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagt-ggtttttg 154  Q
    |||||||||| |||||||||  |||||||||||||||||||||  | || || | | ||||| |||||||||||||||||| || || |||   ||||||    
T  27554518 aaaaatttattttttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaatgtattttaaaagtaaatttttg 27554617  T
Q  155 cttatattagtgaccggagggtgtat 180  Q
    ||||||||||||| ||||||||||||    
T  27554618 cttatattagtgatcggagggtgtat 27554643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 284
Target Start/End: Original strand, 34963375 - 34963467
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaattt 284  Q
    |||||||||||||||| ||||||||||||||||||||||||| |  ||| |||||||  ||  |||||||| | ||||||||||| |||||||    
T  34963375 tacaaaaatgaaaataattgataaattttaagtagaaaaagtcacttttcaaagttttcatgcattgaatgcaccatttccaagataaaattt 34963467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 7728582 - 7728692
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    ||||||||| |||||| |||||||||||||| || |||||||||  ||||||| |||||||  ||| |||| | |||||||||||||||| || || | |    
T  7728582 tacaaaaataaaaataattgataaattttaattataaaaagttacattttaaaatttcaatgaattaaatgcaccatttccaagacaaaaattatttttt 7728681  T
Q  292 agtcttcttaa 302  Q
    | |||||||||    
T  7728682 aatcttcttaa 7728692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 38238816 - 38238930
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  38238816 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 38238915  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  38238916 gaccggagggtgtat 38238930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 40037827 - 40037716
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagt 294  Q
    |||||| |||||| |||||||||||||| ||||||| ||  | |||||||||||||||  ||||||| ||||||||  |||| |||||||||| | ||||    
T  40037827 aaaaataaaaataattgataaattttaaatagaaaa-gtattattttaaagtttcaatgcattgaatatatcatttttaagataaaatttcttttttagt 40037729  T
Q  295 cttcttaataagt 307  Q
    |||  ||||||||    
T  40037728 cttactaataagt 40037716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 21387699 - 21387576
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||| ||||  ||||||||   || ||| |||||||||||||  ||||||||||||| |||| |||||||||||||||| || || | | ||| ||    
T  21387699 aagcaaaattttactttttagattcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaatgaatctagaaaatggatt 21387600  T
Q  151 tttgcttatattagtgaccggagg 174  Q
    ||||||||||||||||||| ||||    
T  21387599 tttgcttatattagtgaccagagg 21387576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 25079224 - 25079354
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||| ||  |||||||||  |||||||||||||||||||||    || || |   ||||| ||||||||||||||||||| |||| ||| | ||    
T  25079224 aagcaaaaatctactttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaattgaatgtatctaaaaagtagatt 25079323  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||| ||||||||||||||||||| ||||||    
T  25079324 tttgtttatattagtgaccggaggatgtatt 25079354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 14995988 - 14995860
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtt 150  Q
    ||||||||||| || ||||||||   |||||| ||||||| ||||    || ||||||||||||||  |||||| |||||||| |||  ||| | || ||    
T  14995988 aagcaaaaattcatattttagattcgttcaataaatgatgcatgttgtctacaataaagaccacatatatcatttattgaatgaatttaaaacattgatt 14995889  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||||||||||||||    
T  14995888 tttgcttatatttgtgaccggagggtgta 14995860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 18234465 - 18234412
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataa 109  Q
    ||||||||||  |||||||||  |||||||||||||||||||||||||||||||    
T  18234465 caaaaatttaatttttagatacattcaattaatgatgtatgtgacatataataa 18234412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 34275234 - 34275338
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg--tttttgcttatattagtgaccggaggg 175  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| || ||||  || |  |||||||||||||||||||||||||||    
T  34275234 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgtagtttttttgcttatattagtgaccggaggg 34275333  T
Q  176 tgtat 180  Q
    |||||    
T  34275334 tgtat 34275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 40417029 - 40416901
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||| |  |||||||||  ||||||||||||||||| ||   | || || |   ||||||||||||||||||||||||| ||||  |||  ||    
T  40417029 aagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaatgtatctaaattgtgaatt 40416930  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||| |||||||||||||||    
T  40416929 tttgcttatattaatgaccggagggtgta 40416901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 46944006 - 46943942
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||    
T  46944006 cacatacatcattaattgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggt 46943942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 10415036 - 10414933
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggttttt-gcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| | |||| |  ||||  || |||||| |||||||||||||||||||||||    
T  10415036 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatcaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 10414937  T
Q  177 gtat 180  Q
    ||||    
T  10414936 gtat 10414933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 16831346 - 16831275
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgt 263  Q
    |||||||||||||||| ||||||||||| || || |||||||||  ||||||||||| |||  |||||||||    
T  16831346 tacaaaaatgaaaataattgataaatttcaaataaaaaaagttactttttaaagttttaatgcattgaatgt 16831275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 24935984 - 24935885
Alignment:
Q  84 ttaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| |||  ||||||||||||||  || |||||||| |||||| |  ||||  || | |||||||||||||||||||||||||||||||||    
T  24935984 ttaatgatgtatatgatttataataaagaccatgtgtatcattaaatgaatgaacctaaaatgtagatttttgcttatattagtgaccggagggtgtatt 24935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 2533957 - 2534039
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||| |||||||| | ||||||  ||||||||||||   |||||||||||| | || ||| ||||||||||||    
T  2533957 aagcaaaaatttatattttagatttattcaatagatgatgtatgtggtgtataataaagactatatacattattaattgaatg 2534039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 18662319 - 18662361
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagtt 234  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  18662319 tacaaaaatgaaaatcattgataaattttaagtagaaaaagtt 18662361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 18662356 - 18662422
Alignment:
Q  242 aaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagtg 308  Q
    |||||||||||| |||||||| ||||||| ||||||||||||| |||| ||  ||| ||||||||||    
T  18662356 aaagtttcaatacattgaatgcatcattttcaagacaaaatttattctttaaactttttaataagtg 18662422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 22106684 - 22106814
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| | ||   |    
T  22106684 aagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaaatgaaat 22106783  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||| |||||||||||| | |||||||||||    
T  22106784 tttgtttatattagtgatcagagggtgtatt 22106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 40529667 - 40529537
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| | ||   |    
T  40529667 aagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaaatgaaat 40529568  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||| |||||||||||| | |||||||||||    
T  40529567 tttgtttatattagtgatcagagggtgtatt 40529537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 46683122 - 46683064
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    |||||||| ||||| ||| ||||||||||||| |||||||||  |||||||||||||||    
T  46683122 caaaaatggaaataattggtaaattttaagtataaaaagttacattttaaagtttcaat 46683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 285
Target Start/End: Complemental strand, 46096840 - 46096747
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttc 285  Q
    |||||||||||||||| |||||||||||||| || ||||| |||  ||||||| |||||||  | |||||| | |||||| |||| || |||||    
T  46096840 tacaaaaatgaaaataattgataaattttaaataaaaaaaattactttttaaaatttcaatgcactgaatgcaccatttctaagataatatttc 46096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 3498337 - 3498393
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  3498337 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 3498393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 27242457 - 27242513
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||| ||||||||||||    ||||||||||||||||||||||||| ||||||||    
T  27242457 ttcaatgaatgatgtatgttgtctataataaagaccacatgcatcatttattgaatg 27242513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 28003275 - 28003219
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||  |||||||  |||||||| ||||| ||||||||||    
T  28003275 ttcaattaatgatgtatgtgatttataatatggaccacatacatcaataattgaatg 28003219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 37066279 - 37066223
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| ||||||||| ||||||||||||||||    
T  37066279 ttcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaatg 37066223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 38663742 - 38663682
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    |||||||||  ||||| |||||||||||||| || |||||||||  |||||||||||||||    
T  38663742 tacaaaaatagaaataattgataaattttaaatataaaaagttactttttaaagtttcaat 38663682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 46477176 - 46477232
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  46477176 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 46477232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 46943976 - 46944016
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataata 108  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  46943976 ttttagatacattcaattaatgatgtatgtgacatataata 46944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 2297356 - 2297325
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  2297356 tttttgcttatattagtgaccggagggtgtat 2297325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 2360474 - 2360443
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  2360474 tttttgcttatattagtgaccggagggtgtat 2360443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 4406122 - 4406224
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta--ttaaagagtggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| |  | ||| |  | ||||||||||||||| ||| ||||||||    
T  4406122 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacttaaaatatagttttttgcttatattaatgatcggagggt 4406221  T
Q  177 gta 179  Q
    |||    
T  4406222 gta 4406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 497
Target Start/End: Complemental strand, 4609654 - 4609583
Alignment:
Q  426 ttaccatattgggcataggataagagtttcttttctgtttttatgctctgttcaggcaactattgtaaatat 497  Q
    ||||||||||||||||||| |||||||| |||||| |||| | |||| |||  |||| ||| ||||||||||    
T  4609654 ttaccatattgggcataggctaagagttacttttccgtttatttgctttgtataggcgactgttgtaaatat 4609583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 6455646 - 6455543
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||   |||||||||||| |||||| ||||||||    
T  6455646 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggt 6455547  T
Q  177 gtat 180  Q
    ||||    
T  6455546 gtat 6455543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 8595262 - 8595293
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  8595262 tttttgcttatattagtgaccggagggtgtat 8595293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 10422923 - 10422954
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  10422923 tttttgcttatattagtgaccggagggtgtat 10422954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 181
Target Start/End: Original strand, 15051100 - 15051230
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagtgg--tt 150  Q
    |||||||||||||| |||||||||  |||||| |||||||||| |    || |||||||  ||||| ||| ||| |||||||| ||| || |   |  ||    
T  15051100 aagcaaaaatttatgttttagatacattcaataaatgatgtatattgtctacaataaaggtcacatacattatttattgaatgaatttaaaacatgaatt 15051199  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||    
T  15051200 tttgcttatatttgtgaccggagggtgtatt 15051230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 181
Target Start/End: Complemental strand, 16777916 - 16777885
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||||||||||||||||||||||||||||||    
T  16777916 ttttgcttatattagtgaccggagggtgtatt 16777885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 34275216 - 34275181
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtattatt 184  Q
    |||||||||||||||||||||||||| |||||||||    
T  34275216 tttttgcttatattagtgaccggaggatgtattatt 34275181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 184
Target Start/End: Complemental strand, 43103097 - 43103062
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtattatt 184  Q
    |||||||||||| |||||||||||||||||||||||    
T  43103097 tttttgcttataatagtgaccggagggtgtattatt 43103062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 716357 - 716311
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtga 99  Q
    |||||||||||||  |||||||||  |||||||||||||||||||||    
T  716357 aagcaaaaatttaatttttagatacattcaattaatgatgtatgtga 716311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 7295146 - 7295100
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattga 132  Q
    |||||||||||||| |||||||||||||||||  || ||||||||||    
T  7295146 aatgatgtatgtgatatataataaagaccacaaacaacattaattga 7295100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 8447742 - 8447712
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  8447742 tttttgcttatattagtgaccggagggtgta 8447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 8571497 - 8571527
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  8571497 tttttgcttatattagtgaccggagggtgta 8571527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 28949390 - 28949420
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  28949390 tttttgcttatattagtgaccggagggtgta 28949420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 42589694 - 42589756
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatat 256  Q
    |||||||||||||  ||| ||||||||| ||| |||||||| | |||| ||||||||||||||    
T  42589694 caaaaatgaaaattattggtaaattttatgtaaaaaaagttgtttttttaagtttcaatatat 42589756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 180
Target Start/End: Original strand, 46648743 - 46648773
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||||||||||||||||||||    
T  46648743 ttttgcttatattagtgaccggagggtgtat 46648773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 49111259 - 49111293
Alignment:
Q  201 gaaaatagttgataaattttaagtagaaaaagtta 235  Q
    ||||||||||||||||||||| |||||||||||||    
T  49111259 gaaaatagttgataaattttaggtagaaaaagtta 49111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 8566261 - 8566310
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    ||||| ||||||||||||| ||||||||| | || |||||||||||||||    
T  8566261 aaataattgataaattttatgtagaaaaattaattttttaaagtttcaat 8566310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 8571406 - 8571377
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||||||||||||||    
T  8571406 ttttgcttatattagtgaccggagggtgta 8571377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 28949372 - 28949323
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaa 128  Q
    |||| |||||||||||||||   |||||||||||||| ||||||||||||    
T  28949372 ttcatttaatgatgtatgtggtctataataaagaccatatgcatcattaa 28949323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 33471516 - 33471589
Alignment:
Q  62 tttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||| ||||||||   ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  33471516 tttattttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 33471589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 4407713 - 4407765
Alignment:
Q  130 tgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||||||||||||    
T  4407713 tgaatgtatctaaaaagtggatttttgtttatattagtgaccggagggtgtat 4407765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 6455664 - 6455696
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||||||||||||||||| |||||||||||||    
T  6455664 tttttgcttatattagtgatcggagggtgtatt 6455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 19532050 - 19531994
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||    |||||||  |||||||| ||||||||||||||||    
T  19532050 ttcaattaatgatgtatgtagtttataatatggaccacatacatcattaattgaatg 19531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 26385668 - 26385724
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||| ||| |||||||||   ||||||||||||||||| ||||||||||| ||||    
T  26385668 ttcaataaattatgtatgtggtctataataaagaccacatacatcattaattaaatg 26385724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 26824931 - 26824899
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||||    
T  26824931 tttttgcttatactagtgaccggagggtgtatt 26824899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 26980244 - 26980308
Alignment:
Q  238 ttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    |||| |||||| ||| ||||||||| |||| | ||||||||||||||||||| |||  |||||||    
T  26980244 ttttcaagttttaatgtattgaatgcatcaatcccaagacaaaatttcttctttaggattcttaa 26980308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 30005973 - 30005917
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   ||| || ||||||||| | ||||||||||||||    
T  30005973 ttcaattaatgatgtatgtgattcatattatagaccacatacgtcattaattgaatg 30005917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 33471587 - 33471531
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  33471587 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 33471531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 36595419 - 36595367
Alignment:
Q  256 ttgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagtg 308  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||||| || |||||    
T  36595419 ttgaatgcatcatttccaagacaaaatttcctctttagacttctaaagaagtg 36595367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 37066225 - 37066281
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||| ||  |||||||| ||||||||||||||||    
T  37066225 ttcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaatg 37066281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 46152239 - 46152336
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    ||||| |||||||| |||| ||||||||| | ||  ||| || ||||||| | ||||||| |||| | |||||| |||||||||||| ||| ||||||||    
T  46152239 aaataattgataaactttatgtagaaaaattcat--tttcaaatttcaatgtgttgaatgcatcaatcccaagaaaaaatttcttctttaggcttcttaa 46152336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 46221121 - 46221177
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||| ||||    
T  46221121 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 46221177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 4e-36; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 51239366 - 51239237
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| |||||||| | ||    
T  51239366 aagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaggaccacatatatcattagttgaatgtatctaaagagtagatt 51239267  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||    
T  51239266 tttgcttatattagtgaccggagggtgtat 51239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 36362727 - 36362599
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagag-tggtt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||| || ||    
T  36362727 aagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaggaccacatacatcattaattaaatgtatttaaagagttgatt 36362628  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  36362627 tttgcttatattagtgaccggagggtgta 36362599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 51617363 - 51617478
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||  ||||||||||||||||    
T  51617363 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacaacattaattgaatgtatctaaaaagtggaattttgcttatattagt 51617462  T
Q  166 gaccggagggtgtatt 181  Q
    ||||||||||||||||    
T  51617463 gaccggagggtgtatt 51617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 52931749 - 52931635
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||  |||||||||||||||||    
T  52931749 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaagaatgaatttttgcttatattagt 52931650  T
Q  166 gaccggagggtgtat 180  Q
    |||||||| ||||||    
T  52931649 gaccggagtgtgtat 52931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 21403939 - 21404039
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtattaaagagtggtttttgcttatattagtgaccggagggtgt 178  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  || |  | ||||||||||||||||||||||||||||||    
T  21403939 ttcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaatggatttttgcttatattagtgaccggagggtgt 21404038  T
Q  179 a 179  Q
    |    
T  21404039 a 21404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 38455285 - 38455159
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-ttttt 153  Q
    ||||||||||  |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| |||| ||||| |||||    
T  38455285 caaaaatttactttttagatacatttaattaatgatgtatgtgacatataataaagaccacatacatcattaaattaatgtatctaaaaagtggattttt 38455186  T
Q  154 gcttatattagtgaccggagggtgtat 180  Q
    |||||||||| ||||||||||||||||    
T  38455185 gcttatattaatgaccggagggtgtat 38455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 41349703 - 41349806
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta--ttaaagagtgg-tttttgcttatattagtgaccggaggg 175  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||| | ||| |||||||||||||||||||||||||||    
T  41349703 ttcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaaaatggatttttgcttatattagtgaccggaggg 41349802  T
Q  176 tgta 179  Q
    ||||    
T  41349803 tgta 41349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 50261030 - 50260927
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggt 176  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||    
T  50261030 ttcatttaaggatgtatgtgacatataataaagaccacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagtaaccggagggt 50260931  T
Q  177 gtat 180  Q
    ||||    
T  50260930 gtat 50260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 29565126 - 29565255
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    ||||||||||  || |||||||||  || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||  ||    
T  29565126 aagcaaaaatcaattttttagatacatttaattaatgatgtatgtgacatataataaagaccacatatatcattaattgaatgtatgtaaaaagtgaatt 29565225  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||| |||||||||| |||||    
T  29565226 tttgcttatattaatgaccggaggatgtat 29565255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 42449225 - 42449100
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-ttttt 153  Q
    ||||||| ||| ||||| |||  |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| |||||    
T  42449225 caaaaatatattttttaaatacattcaattaatgatgaatgtgacatataataaagatcacatacatcattaattgaatgtatctaaaaagtggattttt 42449126  T
Q  154 gcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||  ||||||||    
T  42449125 gcttatattagtgaccatagggtgta 42449100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 52168300 - 52168429
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||||||  |||||||||  || ||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||| |||| ||||| ||    
T  52168300 aagcaaaaatttactttttagatacatttaattaatgatgtatgtggcatataataaagaccacatacatcattaaattaatgtatctaaaaagtggatt 52168399  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||| ||| ||||||||||||||||    
T  52168400 tttgcttatgttaatgaccggagggtgtat 52168429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 52315498 - 52315400
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattag 164  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||| ||||||||||||||||    
T  52315498 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattgaatatatctaaaaagtggatttttgcttatattag 52315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 29720119 - 29720218
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtg-gtttttgcttatattagtgaccggagggt 176  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  29720119 ttcaattattgatatatgtgacatataataaagaccacatacatcattaattaaatgtatttaaaaagtgaatttttgcttatattagtgaccggagggt 29720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 29512163 - 29512276
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| | |   ||||||||||| |||||    
T  29512163 ttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattaaatgtatctaaaaaataaatttttgcttatgttagt 29512262  T
Q  166 gaccggagggtgta 179  Q
     |||||||||||||    
T  29512263 aaccggagggtgta 29512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 1402014 - 1402100
Alignment:
Q  215 aattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    |||||||||||||||||||||  |||||||||||||||  |||||||| | |||||||||||||| ||||||||| |||||||||||    
T  1402014 aattttaagtagaaaaagttacattttaaagtttcaatgcattgaatgcaccatttccaagacaacatttcttctttagtcttctta 1402100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 424 - 498
Target Start/End: Original strand, 4741093 - 4741168
Alignment:
Q  424 gtttaccatattgggcataggataagagtttcttttctg-tttttatgctctgttcaggcaactattgtaaatatt 498  Q
    ||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  4741093 gtttaccattttaggcataggctaagagtttcttttctgttttttatgctctgttcaggcaactattgtatatatt 4741168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 33412497 - 33412611
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||  || | |  ||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  33412497 ttttagatacattcaattaatgatgtatgtgatctaaattttagatcacatacatcattaattgaatgtatctaaaaagtggatttttgcttatattagt 33412596  T
Q  166 gaccggagggtgtat 180  Q
    ||| |||||||||||    
T  33412597 gactggagggtgtat 33412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 17552520 - 17552580
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    |||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  17552520 ttcaattaataatgtatgtgacatataataaagaccacatacatcgttaattgaatgtatt 17552580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 33412573 - 33412460
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||  || |||  ||| ||||| ||||||||||||||||||| |||| ||||| |||||||||||| ||||    
T  33412573 ttttagatacattcaattaatgatgtatgtgatctaaaatttagatcacatacatcattaattgaatgtatctaaaaagtggatttttgcttata-tagt 33412475  T
Q  166 gaccggagggtgtat 180  Q
    |||| ||||||||||    
T  33412474 gaccagagggtgtat 33412460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 45153612 - 45153502
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    ||||||| || ||||| |||||||||||||||||||||||||||  || ||||||||||||  |||||||| | ||||| ||||| ||||||| |||| |    
T  45153612 tacaaaagtggaaataattgataaattttaagtagaaaaagttactttataaagtttcaatgcattgaatgcaccattttcaagataaaatttattcttt 45153513  T
Q  292 agtcttcttaa 302  Q
    ||  |||||||    
T  45153512 agaattcttaa 45153502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 22099811 - 22099880
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta 137  Q
    |||||||||  |||||||||| ||||||||||||||||||||| || |||| ||||||||||||||||||    
T  22099811 ttttagatacattcaattaataatgtatgtgacatataataaaaactacatacatcattaattgaatgta 22099880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 22173812 - 22173897
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||| || |||| | | |||||||||||||||    
T  22173812 aagcaaaaatctacattttagatacattcaattaatgatgtatgtgacatataataaaaactacatactttattaattgaatgtat 22173897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 31437906 - 31437802
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||| ||| |||||||||    ||||  ||||||||||||||| | |    
T  31437906 tacaaaaatgaaaataattgataa-ttttaaatagaaaaagttattttttaaagtttgaatgtattgaatgcgctatttttaagacaaaatttctttttt 31437808  T
Q  292 agtctt 297  Q
    ||||||    
T  31437807 agtctt 31437802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 44720961 - 44720854
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagt 294  Q
    ||||||| ||||| ||| ||||||||| ||  |||||||||  ||| ||||||| |||  |||||||| | ||||| ||||||||||||||||||||||     
T  44720961 aaaaatggaaataattggtaaattttatgttcaaaaagttacttttgaaagttttaatgcattgaatgcaccattttcaagacaaaatttcttctctaga 44720862  T
Q  295 cttcttaa 302  Q
    ||||||||    
T  44720861 cttcttaa 44720854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 12745024 - 12744894
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    ||||||||||| |  |||||||||  |||| | |||||||||||||   |||||||||||||| || |||||||||||||||| || ||||  ||  |||    
T  12745024 aagcaaaaattaacattttagatacattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaatgtaagtt 12744925  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||| ||||||||||||||| ||||    
T  12744924 tttgcttataatagtgaccggagggtctatt 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 23070939 - 23070829
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||||||||| |||| ||| ||||| || |||||||| | ||||||| |||||||  |||||||  |||| || ||||| |||||||||||| |    
T  23070939 tacaaaaatgaaaataattgaaaaaatttaattataaaaagttgttttttaaaatttcaattcattgaatacatcaattacaagataaaatttcttcttt 23070840  T
Q  292 agtcttcttaa 302  Q
    || ||||||||    
T  23070839 agacttcttaa 23070829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 51617393 - 51617323
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtatta 182  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||    
T  51617393 cacatacatcattaattgaatgtatctaaaaagtggatttttggttatattagtgaccggagggtgtatta 51617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 32759085 - 32759012
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaatt 130  Q
    |||||||||  |||||||||| || |||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  32759085 aaaaatttactttttagatatatttaattaatgatatatgtgatatataataaagaccacgtacatcattaatt 32759012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 52315422 - 52315538
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||| ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||| |||| ||||| |||||||||||| ||||    
T  52315422 ttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaaaagtggatttttgcttatactagt 52315521  T
Q  166 gaccggagggtgtatta 182  Q
    || ||||| ||||||||    
T  52315522 gatcggagagtgtatta 52315538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 7981268 - 7981186
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||| |||||||| | |||||| |||||| |||||    || |||||||||||||||||||||| ||||||||    
T  7981268 aagcaaaaatttatattttagatttattcaataaatgatatatgttgtctacaataaagaccacatgcatcatttattgaatg 7981186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 25881233 - 25881131
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggttttt-gcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| |  ||||  || |||||| |||||||||||||||||||||||    
T  25881233 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacctaaaatgtagttttttgcttatattagtgaccggagggt 25881134  T
Q  177 gta 179  Q
    |||    
T  25881133 gta 25881131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 10872722 - 10872818
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg--tattaaagagtggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||  |||||||||||||| || ||||||||||||||||  | | ||| |    |||||||||||| |||||||||||||||||||    
T  10872722 aatgatgtatgtgatttataataaagaccatatacatcattaattgaatgaatctaaaatataaatttttgcttataatagtgaccggagggtgtat 10872818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 37492402 - 37492475
Alignment:
Q  57 aaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaatt 130  Q
    |||||||||| |||||||||  ||||||||| ||||||| |||||||||||||||||  |||  ||||||||||    
T  37492402 aaaaatttattttttagatacattcaattaacgatgtatatgacatataataaagacggcatatatcattaatt 37492475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 41349768 - 41349655
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatta-aagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||   | || || |   ||||| ||||||||||||||||||||  || ||||  |||||||||||||||||    
T  41349768 ttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtattttaaaagtgaatttttgcttatattagt 41349669  T
Q  166 gaccggagggtgta 179  Q
    ||||||||||||||    
T  41349668 gaccggagggtgta 41349655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 51239321 - 51239389
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||||||| |||| | | | ||||||||||||||||||||||||||||||||    
T  51239321 cacatacatcattaattgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtat 51239389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 287
Target Start/End: Complemental strand, 23073753 - 23073658
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttctt 287  Q
    |||||||||||||||| || | ||| ||||| || |||||||||| |||||||||||||||  |||||||  | || || ||||| ||||||||||    
T  23073753 tacaaaaatgaaaataattaaaaaaatttaattataaaaagttatgttttaaagtttcaattcattgaatacaccaattacaagataaaatttctt 23073658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 17552539 - 17552470
Alignment:
Q  114 cacatgcatcattaattgaatgtatta-aagagtgg-tttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||| ||| ||||||||||||||||  || ||||  |||||||||||||||||||||||||||||||||    
T  17552539 cacatacattattaattgaatgtattttaaaagtgaatttttgcttatattagtgaccggagggtgtatt 17552470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 4204051 - 4204107
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagttt 248  Q
    ||||||||| |||||| |||||||||||||| || |||||||||  |||||||||||    
T  4204051 tacaaaaataaaaataattgataaattttaaataaaaaaagttactttttaaagttt 4204107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 16127845 - 16127789
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  16127845 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 16127789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 21659181 - 21659237
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   |||||| |||||||||  |||||||||||||||    
T  21659181 ttcaattaatgatgtatgtgattcataatatagaccacatatatcattaattgaatg 21659237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 29565171 - 29565104
Alignment:
Q  114 cacatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagtgaccggagggtgta 179  Q
    ||||| ||||||||||| |||||||   ||| | || |||||||||||||||||||||||||||||||    
T  29565171 cacatacatcattaattaaatgtatctaaaaaattgatttttgcttatattagtgaccggagggtgta 29565104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 50261049 - 50261081
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  50261049 tttttgcttatattagtgaccggagggtgtatt 50261081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 52168346 - 52168278
Alignment:
Q  113 ccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    |||||| ||||||||||| ||||||| |||| |||   |||||||||||||||||||||||||||||||    
T  52168346 ccacatacatcattaattaaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgta 52168278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 8439301 - 8439403
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta--ttaaagagtggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| |  | ||| |    ||||||||||||||||||||||||||||    
T  8439301 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaacctaaaatataattttttgcttatattagtgaccggagggt 8439400  T
Q  177 gta 179  Q
    |||    
T  8439401 gta 8439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 17005001 - 17005059
Alignment:
Q  79 ttcaattaatgatgtatgtga--catataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||| || ||||||||| ||||||||||||||||    
T  17005001 ttcaattaatgatgtatgtggtccatatattatagaccacatacatcattaattgaatg 17005059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 26121647 - 26121580
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| | |||| | |||||||||||||   |||||||||||||| || ||||||||||||||||    
T  26121647 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatg 26121580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 26244488 - 26244421
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| | |||| | |||||||||||||   |||||||||||||| || ||||||||||||||||    
T  26244488 ttttagatttattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatg 26244421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 34935646 - 34935579
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| | |||||||||||||||||||||   | ||||  |||||||| ||||||||||||||||    
T  34935646 ttttagatttattcaattaatgatgtatgtgattcaaaatatggaccacatacatcattaattgaatg 34935579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 38677680 - 38677711
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  38677680 tttttgcttatattagtgaccggagggtgtat 38677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 52685097 - 52685220
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||||||||  ||||| ||| |||||||||| |||||||| |||  |||||  ||||| ||  |||||||| |  ||||| ||||  ||||||||||| |    
T  52685097 tacaaaaatagaaataattgctaaattttaaatagaaaaatttactttttatcgtttctatgcattgaatgcacaatttctaagatgaaatttcttcttt 52685196  T
Q  292 agtcttcttaataagtgttctaag 315  Q
    |  |||||||||||||||| ||||    
T  52685197 aaacttcttaataagtgttgtaag 52685220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 52931751 - 52931818
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    ||||| ||||||||||||||||||| |||| ||| | ||||| ||||||| |||||||||||||||||    
T  52931751 cacatacatcattaattgaatgtatctaaaaagtagatttttacttatatcagtgaccggagggtgta 52931818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 4182039 - 4181973
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    |||||||| | |||||| |||||||||| |||  |||| || ||||||||| |||||||||||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcattaattgaat 4181973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 23057202 - 23057092
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    ||||||||||||| || |||| ||| ||||| || ||||||| || ||||||||||| |||  |||||||  |||| || || || |||||||||||| |    
T  23057202 tacaaaaatgaaattaattgaaaaaatttaattataaaaagtcattttttaaagttttaattcattgaatacatcaattacacgataaaatttcttcttt 23057103  T
Q  292 agtcttcttaa 302  Q
    |  ||||||||    
T  23057102 aaacttcttaa 23057092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 25881251 - 25881281
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  25881251 tttttgcttatattagtgaccggagggtgta 25881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 38677662 - 38677560
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||    ||||||||||| |||||||||||||||    
T  38677662 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggt 38677563  T
Q  177 gta 179  Q
    |||    
T  38677562 gta 38677560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 40696184 - 40696114
Alignment:
Q  238 ttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagtg 308  Q
    |||| |||||| ||||| | |||||||||| ||  ||||||||||||||||| ||| ||||||||| ||||    
T  40696184 ttttcaagttttaatatgtcgaatgtatcaattttaagacaaaatttcttctttaggcttcttaatgagtg 40696114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 53683848 - 53683882
Alignment:
Q  101 atataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||| ||||||||||||||||    
T  53683848 atataataaagaccacatacatcattaattgaatg 53683882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 54987249 - 54987307
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaat 252  Q
    |||||||| |||||  |||||||||||||||||||||| | |  |||||||||||||||    
T  54987249 caaaaatgtaaataaatgataaattttaagtagaaaaaataactttttaaagtttcaat 54987307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 3020664 - 3020713
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||| ||| ||||||||||||| | || ||||||||||||||||    
T  3020664 aatgatgtatatgatatataataaagactatatacatcattaattgaatg 3020713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 5919457 - 5919424
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatta 182  Q
    |||||||||||||| |||||||||||||||||||    
T  5919457 tttttgcttatatttgtgaccggagggtgtatta 5919424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 18940092 - 18940047
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtg 98  Q
    |||||||||||||| ||||| |||  ||||||||||||||||||||    
T  18940092 aagcaaaaatttatattttatatacattcaattaatgatgtatgtg 18940047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 29512254 - 29512209
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtg 98  Q
    |||||||||||||| |||||||||  || |||||||||||||||||    
T  29512254 aagcaaaaatttattttttagatacatttaattaatgatgtatgtg 29512209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 36362682 - 36362750
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||| ||||||||||||||||||| |||| ||| | ||||||||||||||| ||| |||||||||||||    
T  36362682 cacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattaatga-cggagggtgtatt 36362750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 40065371 - 40065420
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||   ||||||||||||||| || ||||||||||||||||    
T  40065371 aatgatgtatgtagtatataataaagaccatatacatcattaattgaatg 40065420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Original strand, 40470534 - 40470563
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||||||||||||||    
T  40470534 ttttgcttatattagtgaccggagggtgta 40470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 48600702 - 48600645
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaa 260  Q
    ||||| || |||||||||| ||||||||| |||  ||||||||||||||| |||||||    
T  48600702 aaataatttataaattttacgtagaaaaaattactttttaaagtttcaatgtattgaa 48600645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 1043966 - 1044022
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||  | ||||||| ||| ||||| ||||||||||| ||||    
T  1043966 ttcaattaatgatgtatgtagcttataatatagatcacatacatcattaattaaatg 1044022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 29720131 - 29720071
Alignment:
Q  121 atcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    |||| |||||||||| || |||| ||||| |||||| ||||||||||||||||||||||||    
T  29720131 atcaataattgaatgcatctaaaaagtggatttttgattatattagtgaccggagggtgta 29720071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 39530492 - 39530436
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  39530492 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 39530436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 39530438 - 39530494
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  39530438 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 39530494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 40326535 - 40326479
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  40326535 ttcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatg 40326479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 42595784 - 42595836
Alignment:
Q  83 attaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  42595784 attaatgatgtatgtggtttataatatggaccacatacatcattaattgaatg 42595836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 44435217 - 44435273
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  44435217 ttcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatg 44435273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 52638076 - 52638132
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||| ||||||||||  |||| ||  |||||||| ||||||||||||||||    
T  52638076 ttcaattaataatgtatgtgatttatattatcgaccacatacatcattaattgaatg 52638132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 54680532 - 54680588
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||||||   ||||||  ||| |||| ||||||||||||||||    
T  54680532 ttcaattaatgatgtatgtgattcataatatggactacatacatcattaattgaatg 54680588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 120268 - 120135
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||||||  |||||||||  ||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||| |||| ||||   |    
T  120268 aagcaaaaatttactttttagatacattcaattaatgatgtatgtgatatacaataaataccacatacatcattaattgaatgtatctaaaaagtgaaat 120169  T
Q  151 tttgcttatattagtgaccggagggtgtattatt 184  Q
    ||||||||||||||||||||||||||||||||||    
T  120168 tttgcttatattagtgaccggagggtgtattatt 120135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 180
Target Start/End: Original strand, 120177 - 120291
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||  || || |  | | ||||| ||||||||||||||||||| |||| |||   |||||||||||||||||    
T  120177 ttttagatacattcaattaatgatgtatgtggtatttattgtatatcacatacatcattaattgaatgtatctaaaaagtaaatttttgcttatattagt 120276  T
Q  166 gaccggagggtgtat 180  Q
    |||||||||||||||    
T  120277 gaccggagggtgtat 120291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 4073 - 3945
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtg-gtt 150  Q
    |||||||||||||  |||||||||  |||||| |||| |||||||||||||||||||||||||||| ||||||||| | |||||| ||||| ||||  ||    
T  4073 aagcaaaaatttactttttagatacattcaataaatgttgtatgtgacatataataaagaccacatacatcattaaattaatgtatttaaaaagtgtatt 3974  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  3973 tttgcttatattagtgaccggagggtgta 3945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 30397832 - 30397717
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||| |||||| ||||||||||    
T  30397832 ttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagt 30397734  T
Q  166 gaccggagggtgtatta 182  Q
    |||||||||||||||||    
T  30397733 gaccggagggtgtatta 30397717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 17773624 - 17773496
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||| ||||| ||    
T  17773624 aagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcatttattgaatgtatctaaaaagtggatt 17773525  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||| |||||||||||||| |||| ||||    
T  17773524 tttgtttatattagtgaccagaggatgta 17773496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 21998162 - 21998033
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||  |||||||||  |||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||||| |||| | ||  ||    
T  21998162 aagcaaaaatctactttttagatacattcaattaatgatgtatgtgacatataataaatatcacatacattattaattgaatgtatctaaaaaatgtatt 21998063  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||| ||||||||||||    
T  21998062 tttgcttatattagtgatcggagggtgtat 21998033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 21506586 - 21506456
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||||||  |||||||||  |||||||||||||||||||||  | || || |   ||||| ||||||||||||||||||| |||| ||||| ||    
T  21506586 aagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatctaaaaagtggatt 21506487  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||    
T  21506486 tttgcttatattagtgaccggagggtgtatt 21506456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 21506495 - 21506608
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| | |   ||||||||||||||| |    
T  21506495 ttttagatacattcaattaatgatgtatgtgacatataataaagatcacatacatcattaattgaatgtatctaaaaattaaatttttgcttatattaat 21506594  T
Q  166 gaccggagggtgta 179  Q
    ||||||| ||||||    
T  21506595 gaccggatggtgta 21506608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 30460648 - 30460757
Alignment:
Q  71 tagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgac 168  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||| |||| |||   ||||||||||||||||||||    
T  30460648 tagatatattcaatcaatgatgtatgtgatatataataaagaccacatacatcattaattgaatctatctaaaaagtaaatttttgcttatattagtgac 30460747  T
Q  169 cggagggtgt 178  Q
     |||||||||    
T  30460748 tggagggtgt 30460757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 28577724 - 28577595
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||  |||||||||  |||||||||| |||||||||| ||||||||||||||||||    |||||||| ||||||| |||| | ||  ||    
T  28577724 aagcaaaaatatactttttagatacattcaattaataatgtatgtgatatataataaagaccacatatcccattaattaaatgtatctaaaaaatgaatt 28577625  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||| ||||||||||    
T  28577624 tttgcttatattagtgacctgagggtgtat 28577595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 17268110 - 17268050
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt 139  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  17268110 ttcaattaataatgtatgtgacatataataaagaccacatacatcattaattaaatgtatt 17268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 31536437 - 31536305
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataa---agaccacatgcatcattaattgaatgtat-taaagagtgg 148  Q
    |||||||||||||  ||||| |||  |||||||||| ||| |||||||| |||||||   | ||||||| ||||||||| | ||||||| |||| ||| |    
T  31536437 aagcaaaaatttactttttaaatacattcaattaattatgcatgtgacacataataataaaaaccacatacatcattaaataaatgtatctaaaaagttg 31536338  T
Q  149 -tttttgcttatattagtgaccggagggtgtat 180  Q
     ||||||||||||||||||||||||||||||||    
T  31536337 atttttgcttatattagtgaccggagggtgtat 31536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 17773533 - 17773648
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  |||||| |||||||||||||   | || || | | ||||| ||||||||||||||||||| |||| ||| | |||||||||||||||||    
T  17773533 ttttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcattaattgaatgtatctaaaaagtagatttttgcttatattagt 17773632  T
Q  166 gaccggagggtgtatt 181  Q
    ||||||||||||||||    
T  17773633 gaccggagggtgtatt 17773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 30456799 - 30456869
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatg 262  Q
    |||||||||| ||||| |||||||||||| |||| |||||||||  ||||||| |||||||||||||||||    
T  30456799 tacaaaaatggaaataattgataaatttttagtataaaaagttactttttaaaatttcaatatattgaatg 30456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 21998056 - 21998184
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||  || |||||||||  |||||||||| |||||||||| || || || |   ||||| ||||||||||||||||||| |||| ||| | ||    
T  21998056 aagcaaaaatacattttttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcattaattgaatgtatctaaaaagtagatt 21998155  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| |||||||| |||||||    
T  21998156 tttgcttatattggtgaccggcgggtgta 21998184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 33605173 - 33605057
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    ||||||||| | |||| ||||||||||| |||| ||||||||||| ||||||||||| |||   || ||||||  | ||  ||||||||| ||||||| |    
T  33605173 tacaaaaataagaataattgataaatttaaagttgaaaaagttatattttaaagttttaatgatttcaatgtacaaattttaagacaaaaattcttcttt 33605074  T
Q  292 agtcttcttaataagtg 308  Q
    ||||||||||| |||||    
T  33605073 agtcttcttaacaagtg 33605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 30397757 - 30397869
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||| | | || || |   ||||| |||||||||||||||||||   ||| || | |||||||||||||||||    
T  30397757 ttttagatacattcaattaatgatgtatgtggctt-tattatatgtcacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagt 30397855  T
Q  166 gaccggagggtgta 179  Q
    ||||||||||||||    
T  30397856 gaccggagggtgta 30397869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 9200923 - 9200878
Alignment:
Q  424 gtttaccatattgggcataggataagagtttcttttctgtttttat 469  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  9200923 gtttaccatattggacataggctaagagtttcttttctgtttttat 9200878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 14310644 - 14310516
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagt-ggtt 150  Q
    |||||||||| | | ||||||||   |||| |||||||||||||||  |||||||||||||||  ||||||||||| |||||| |  ||||  || | ||    
T  14310644 aagcaaaaatctgtattttagattcattcatttaatgatgtatgtggtatataataaagaccatgtgcatcattaaatgaatgaacataaaatgtagatt 14310545  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||| ||||||||| |||||||||||||||    
T  14310544 tttacttatattaatgaccggagggtgta 14310516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 8145992 - 8146095
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttt-tgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  | ||||||||| |||||| || ||||  ||  |||| ||||||||||||||||||||||||    
T  8145992 ttcatttaatgatgtatgtggtctataataaagaccatgtacatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggt 8146091  T
Q  177 gtat 180  Q
    ||||    
T  8146092 gtat 8146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 3686889 - 3686811
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaa 281  Q
    ||||| || |||| ||||| || ||||| | ||| ||||||| ||||||||| ||||||| ||||||||||||||||||    
T  3686889 aaataatttataagttttatgtcgaaaatgctattttttaaactttcaatatcttgaatgcatcatttccaagacaaaa 3686811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 6560700 - 6560802
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttt-tgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| |  ||||||||||| |||||| || ||||  ||  |||| ||||||||||||||||||||||||    
T  6560700 ttcatttaatgatgtatgtggtctataataaagactatgtgcatcattaaatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggt 6560799  T
Q  177 gta 179  Q
    |||    
T  6560800 gta 6560802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 10228414 - 10228329
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaa 281  Q
    ||||||||||||| || |||||||||  ||||||||| ||| |||||||| ||| ||| | ||||||| ||||||||||||| ||||    
T  10228414 aaaaatgaaaataatttataaattttttgtagaaaaaatta-cttttaaacttttaatgtcttgaatgcatcatttccaagaaaaaa 10228329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 172
Target Start/End: Complemental strand, 30460736 - 30460615
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||||||  |||||||||  ||||||||||||||||||||   | || || | | ||||| ||||||| ||||||| ||| || | ||||| ||    
T  30460736 aagcaaaaatttactttttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcattgattgaatatatctacaaagtggatt 30460637  T
Q  151 tttgcttatattagtgaccgga 172  Q
    ||||||||||||| ||||||||    
T  30460636 tttgcttatattattgaccgga 30460615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 6047999 - 6048055
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||||  ||||||   ||||||| ||||||||||||||||    
T  6047999 ttcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattgaatg 6048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 6560682 - 6560650
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||||||||||||||||    
T  6560682 tttttgcttatattagtgaccggagggtgtatt 6560650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 309
Target Start/End: Original strand, 8082495 - 8082579
Alignment:
Q  225 agaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagtgt 309  Q
    ||||||| |||  |||||||||||||||  ||| |||| | ||||| |||||||||||||||| | ||| |||||||| ||||||    
T  8082495 agaaaaaattactttttaaagtttcaatgcatttaatgcaccattttcaagacaaaatttcttatttagacttcttaagaagtgt 8082579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 8449591 - 8449721
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgac--atataataaagaccacatgcatcattaattgaatg--tattaaagagtgg 148  Q
    ||||||||||| || |||| ||| | |||||| |||||||||||||    ||||||| |||| || |||||||||||||||||||  | | ||| | |      
T  8449591 aagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatctaaaatattaa 8449690  T
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||||||||||| ||||    
T  8449691 tttttgcttataatagtgaccggaggatgta 8449721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 8458395 - 8458525
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgac--atataataaagaccacatgcatcattaattgaatg--tattaaagagtgg 148  Q
    ||||||||||| || |||| ||| | |||||| |||||||||||||    ||||||| |||| || |||||||||||||||||||  | | ||| | |      
T  8458395 aagcaaaaattaatattttggatttattcaataaatgatgtatgtggtctatataatcaagatcatatgcatcattaattgaatgaatctaaaatattaa 8458494  T
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||||||||||| ||||    
T  8458495 tttttgcttataatagtgaccggaggatgta 8458525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 4844355 - 4844284
Alignment:
Q  110 agaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccggagggtgta 179  Q
    ||||||||| ||||||||||||||||||| |||| | ||  ||||||||||||||| |||||| ||||||||    
T  4844355 agaccacatacatcattaattgaatgtatctaaaaaatgattttttgcttatattactgaccgaagggtgta 4844284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 3012483 - 3012401
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||| || ||||||||   |||||| ||||||||||||    || |||||||||||||| ||||||| ||||||||    
T  3012483 aagcaaaaattcatgttttagattcattcaataaatgatgtatgttgtttacaataaagaccacatacatcatttattgaatg 3012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 3212284 - 3212338
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaa 133  Q
    |||||||||||||||||||||  |||| ||  |||||||| ||||||||||||||    
T  3212284 ttcaattaatgatgtatgtgatttatattatggaccacatacatcattaattgaa 3212338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 8145973 - 8145943
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  8145973 tttttgcttatattagtgaccggagggtgta 8145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Original strand, 14310636 - 14310666
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  14310636 tttttgcttatattagtgaccggagggtgta 14310666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 31398251 - 31398221
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||||    
T  31398251 tttttgcttatattagtgaccggagggtgta 31398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 31398269 - 31398371
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  ||    ||||||||||| |||||||||||||||    
T  31398269 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggt 31398368  T
Q  177 gta 179  Q
    |||    
T  31398369 gta 31398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 15467691 - 15467614
Alignment:
Q  58 aaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||| ||| ||||   |||||||||||||||||||||  ||||||| ||| ||||| ||||| ||||| ||||    
T  15467691 aaaatttatttttcagattcattcaattaatgatgtatgtgatttataatatagatcacatacatcaataattaaatg 15467614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 2033266 - 2033210
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||| || | ||||||| | ||||||  ||||||||||||||||    
T  2033266 ttcaattaatgatgtatttggcctataatatataccacaaacatcattaattgaatg 2033210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 7418918 - 7418974
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    |||||| ||||||||| ||||||||||| ||||    
T  7418918 ttcaattaatgatgtatgtggttcataatatagaccacatacatcattaatttaatg 7418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 10731570 - 10731514
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||| ||||| ||||||||| ||||||    
T  10731570 ttcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaatg 10731514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 10731516 - 10731572
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| ||||||||||||||||  |||| || | ||||||| ||||||||||||||||    
T  10731516 ttcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatg 10731572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 12349858 - 12349914
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||||  ||||||  |||||||| ||||||||| ||||||    
T  12349858 ttcatttaatgatgtatgtgactcataatatggaccacatacatcattaaatgaatg 12349914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 18097175 - 18097207
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||| ||||||||||||||||||||||||||    
T  18097175 tttttgtttatattagtgaccggagggtgtatt 18097207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 21478650 - 21478594
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  21478650 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 21478594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 21478596 - 21478652
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  21478596 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 21478652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 13689553 - 13689681
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| || |||| ||||  ||    
T  13689553 aagcaaaaatctattttttagatacattcaattaatgatgtatgtgacatataataaagacaacatacattattaattgaatgaatctaaaaagtgaatt 13689652  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||||||||| |||||    
T  13689653 tttgcttatattagtgaccggagagtgta 13689681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 52817584 - 52817712
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    ||||||||||| |  ||| |||||  |||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||| ||    
T  52817584 aagcaaaaattcacttttaagatacattcatttaaggatgtatgtgacatataataaagatcacatacatcattaattgaatgtatctaaaaagtggatt 52817683  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||||||||||||||||    
T  52817684 tttgcttatattagtgaccggagggtgta 52817712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 5418533 - 5418660
Alignment:
Q  54 agcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggttt 151  Q
    |||||||||  || |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||   |||    
T  5418533 agcaaaaatcaattttttagatacattcaattaatgatgtatgtgacatataataaagaccacatacatcattaattcaatgtatctaaaaagtaaattt 5418632  T
Q  152 ttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||||||| |||||||||||    
T  5418633 ttgcttatattagtgatcggagggtgta 5418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 24941233 - 24941116
Alignment:
Q  54 agcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gttt 151  Q
    |||||||||| | ||||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||| ||||  |||    
T  24941233 agcaaaaattcaccttttagatacattcaattaatgatgtatttgatatataataaagaccacatacatcattaattgaatgtatctaaaaagtgaattt 24941134  T
Q  152 ttgcttatattagtgacc 169  Q
    ||||||||||||||||||    
T  24941133 ttgcttatattagtgacc 24941116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 41899173 - 41899075
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    ||||| ||||| |||||||||||||||||||||  |||||||||||||||  |||||||| | |||||||||||||| ||||||||| |||||||||||    
T  41899173 aaataattgatgaattttaagtagaaaaagttacattttaaagtttcaatgcattgaatgcaccatttccaagacaatatttcttctttagtcttctta 41899075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 5281192 - 5281282
Alignment:
Q  93 tatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||  ||||| |||||||||||||||||||||||||||    
T  5281192 tatgtgacatataataaagatcacatacatcattaattgaatgtatctaaaaagtgaatttttacttatattagtgaccggagggtgtatt 5281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 5168615 - 5168521
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtctt 297  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||| | ||||||||||| || ||||||||| |||||||    
T  5168615 aaataattgatgaattttaagtagaaaaaattatattttaaaatttcaatacattgaatgcaccatttccaagataacatttcttctttagtctt 5168521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 8839684 - 8839775
Alignment:
Q  194 caaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttctt 287  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||  |||||||| || |||| ||||||||||||||||    
T  8839684 caaaaatgaaaataattggtaaattttaagtagaaaa-gttat-ttttaaagtttcaatgcattgaatgcattattttcaagacaaaatttctt 8839775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 10031629 - 10031563
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  10031629 ttttagatatatttaattaataatgtatgtgacatataataaagatcacatacatcattaattgaat 10031563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 38539495 - 38539580
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||||||||||||| ||||| || | |||||| |||||||||| || ||||||||||||||||||| |||  ||||||||||||||    
T  38539495 aagcaaaaatttatattttaaatttattcaataaatgatgtatatggcatataataaagaccacatacatagttaattgaatgtat 38539580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 55087776 - 55087861
Alignment:
Q  101 atataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtattatt 184  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| | | | ||||||||||||||||||||||||||||||| ||||    
T  55087776 atataataaagaccgcatacatcattaattgaatgtatctaaaaattagatttttgcttatattagtgaccggagggtgtactatt 55087861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 38868937 - 38868831
Alignment:
Q  202 aaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttctta 301  Q
    |||||| || |||| ||||| |||||||||||||  ||||||| ||||||| | ||||||| |||||| ||||||||||||||| ||| |||  ||||||    
T  38868937 aaaataatttataagttttatgtagaaaaagttactttttaaactttcaatgtgttgaatgcatcattcccaagacaaaatttcctctttagatttctta 38868838  T
Q  302 ataagtg 308  Q
    | |||||    
T  38868837 acaagtg 38868831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 56328493 - 56328595
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   |||||||||||| | |||||||||||| |||||| || ||||  || | ||||||||||||||||||||||||||||    
T  56328493 ttcatttaatgatgtatgtggtctataataaagactatatgcatcattaaatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggt 56328592  T
Q  177 gta 179  Q
    |||    
T  56328593 gta 56328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 14451049 - 14450951
Alignment:
Q  84 ttaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||  ||||||||||||||  ||||||||||| |||||| || ||||  || | |||||||||||| |||||| ||||||||||||    
T  14451049 ttaatgatgtatgtgatctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgtat 14450951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 6243638 - 6243727
Alignment:
Q  49 gctaaagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat 138  Q
    |||| ||||||||||||| |||||||||  || ||||||| || ||||||| |||||| |||||  | || |||||||||||||||||||    
T  6243638 gctatagcaaaaatttattttttagatacatttaattaataatatatgtgatatataaaaaagattatatacatcattaattgaatgtat 6243727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 19934761 - 19934632
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggt-t 150  Q
    |||||||||| ||| ||||||||   |||||| |||||||||||||    || | | ||||||||| ||||||| |||||||| || |||| |||||  |    
T  19934761 aagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaaagtggaat 19934662  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||| |||||||||||||||||||    
T  19934661 tttgcttataatagtgaccggagggtgtat 19934632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 29006852 - 29006981
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtgg-tt 150  Q
    |||||||||| ||| ||||||||   |||||| ||||||||||||||   || | | ||||||||| ||||||| |||||||| | ||||| |||||  |    
T  29006852 aagcaaaaatctattttttagattcattcaataaatgatgtatgtgatccattaaatagaccacatacatcatttattgaatgaatttaaaaagtggaat 29006951  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||| ||||||||||||| |||||    
T  29006952 tttgcttataatagtgaccggaggatgtat 29006981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 40881477 - 40881526
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||||||||| || || ||||||||||||||||    
T  40881477 aatgatgtatgtgacatataataaagatcatatacatcattaattgaatg 40881526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 44156060 - 44156145
Alignment:
Q  96 gtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgta 179  Q
    |||||||||||| ||||| |||  ||||||||||| ||||||| |||| ||||  |||||||||||||||||||| ||||||||||    
T  44156060 gtgacatataatgaagactacacacatcattaattcaatgtatctaaaaagtgaatttttgcttatattagtgacaggagggtgta 44156145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Complemental strand, 54164936 - 54164807
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggt-t 150  Q
    |||||||||| ||| ||||||||   |||||| |||||||||||||    || | | ||||||||| ||||||| |||||||| || |||| |||||  |    
T  54164936 aagcaaaaatctattttttagattcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaaagtggaat 54164837  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||| |||||||||||||||||||    
T  54164836 tttgcttataatagtgaccggagggtgtat 54164807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 3167167 - 3167223
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagttt 248  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||| ||| |||||||    
T  3167167 tacaaaaatgaaaataattggtaaattttaagtagaaaaggttatttttcaaagttt 3167223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 20542846 - 20542902
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  20542846 ttcaattaatgatgtatgtgggttataatatagaccacatacatcattaattgaatg 20542902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 42013243 - 42013187
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  42013243 ttcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatg 42013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 51126202 - 51126146
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  51126202 ttcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaatg 51126146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 52281161 - 52281217
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||| ||||||||||||   ||||||||||||||||||||||| |||||||||||    
T  52281161 ttcaataaatgatgtatgtagtatataataaagaccacatgcatccttaattgaatg 52281217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 4406273 - 4406340
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| | |||| | |||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  4406273 ttttagatttattcattaaatgatgtatgtggtctataataaagaccacatacatcattaattgaatg 4406340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 21884062 - 21884164
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta--ttaaagagtggtttttgcttatattagtgaccggagggt 176  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| |  | ||| |  | ||||||||||||||| ||||||||||||    
T  21884062 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaacctaaaatatagttttttgcttatattaatgaccggagggt 21884161  T
Q  177 gta 179  Q
    |||    
T  21884162 gta 21884164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 29223959 - 29224014
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataata 108  Q
    ||||||||||  || |||||||||| ||||||||||||| ||||||||||||||||    
T  29223959 aagcaaaaatccattttttagatatattcaattaatgatatatgtgacatataata 29224014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 42563388 - 42563467
Alignment:
Q  224 tagaaaaagttatctttt-aaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaa 302  Q
    ||||||||||||| |||| |||||||||||  |||||||| | |||||| |||| |||||||||||  ||||||||||||    
T  42563388 tagaaaaagttatttttttaaagtttcaatgcattgaatgcaccatttctaagataaaatttcttccttagtcttcttaa 42563467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 3784143 - 3784073
Alignment:
Q  204 aatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaa 274  Q
    |||| ||||| ||||||||||||||||| ||   ||||||||||| |||  ||||||||||||||||||||    
T  3784143 aataattgatgaattttaagtagaaaaaatttgattttaaagttttaatgcattgaatgtatcatttccaa 3784073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 6167916 - 6167846
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatg 262  Q
    |||| |||| |||||| ||||| ||||||||||| |||||||||  |||||||||||||||  ||||||||    
T  6167916 tacacaaataaaaataattgatgaattttaagtaaaaaaagttacattttaaagtttcaatgcattgaatg 6167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 48603654 - 48603606
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||||||  ||||||||||| || ||||||||||||||||||    
T  48603654 aatgatgtatgtgatctataataaagatcatatgcatcattaattgaat 48603606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 51126148 - 51126204
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||| || ||||||||| ||||||||||||||||    
T  51126148 ttcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatg 51126204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 3517160 - 3517105
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    |||||||||||||||||||||  |||| ||   |||||||||||||||||||||||    
T  3517160 ttcaattaatgatgtatgtgatctatattatgaaccacatgcatcattaattgaat 3517105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 6126767 - 6126802
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtattatt 184  Q
    |||||||||||| |||||||||||||||||||||||    
T  6126767 tttttgcttataatagtgaccggagggtgtattatt 6126802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 21884043 - 21884012
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  21884043 tttttgcttatattagtgaccggagggtgtat 21884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 181
Target Start/End: Original strand, 28702177 - 28702208
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtatt 181  Q
    ||||||||||||||||||||||||||||||||    
T  28702177 ttttgcttatattagtgaccggagggtgtatt 28702208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Original strand, 49481995 - 49482026
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  49481995 tttttgcttatattagtgaccggagggtgtat 49482026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 180
Target Start/End: Complemental strand, 56328474 - 56328443
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||||||||||||||||    
T  56328474 tttttgcttatattagtgaccggagggtgtat 56328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 6317073 - 6317015
Alignment:
Q  203 aaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaat 261  Q
    ||||| |||||||||||||  | ||||||||||| |||||| |||||||||| ||||||    
T  6317073 aaataattgataaattttatattgaaaaagttattttttaatgtttcaatatgttgaat 6317015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 21586935 - 21587017
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| ||||| |||||| ||  |||||| ||||||||||||| | |||| || |||| |||| ||||||| ||||||||    
T  21586935 aagcaaaagtttattttttaggtaaattcaataaatgatgtatgtgtcctatattatagactacatacatcatttattgaatg 21587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 28702085 - 28702055
Alignment:
Q  150 ttttgcttatattagtgaccggagggtgtat 180  Q
    |||||||||||||||||||||||||||||||    
T  28702085 ttttgcttatattagtgaccggagggtgtat 28702055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 4484164 - 4484115
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||   |||||||||||||| || ||||||||||||||||    
T  4484164 aatgatgtatgtggtctataataaagaccatatacatcattaattgaatg 4484115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 16391526 - 16391473
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||| |||||||||   ||| || ||||||||||||||||||||||||||    
T  16391526 aattaatgttgtatgtgattcatattacagaccacatgcatcattaattgaatg 16391473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 24858687 - 24858618
Alignment:
Q  238 ttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctctagtcttcttaataagt 307  Q
    ||||||| |||||||  |||||||| ||||||||||||||||| ||||| |  ||| |||||||| ||||    
T  24858687 ttttaaaatttcaatgcattgaatgcatcatttccaagacaaagtttctacgttagacttcttaacaagt 24858618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 4044395 - 4044339
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| ||||||    
T  4044395 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatg 4044339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 8826885 - 8826957
Alignment:
Q  56 caaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaa 128  Q
    ||||||||| | ||||| || | |||| | ||||||||||||||  |||||||||||||| || |||||||||    
T  8826885 caaaaatttgtattttaaatttattcattaaatgatgtatgtgatctataataaagaccatatacatcattaa 8826957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 9011788 - 9011872
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtggtttttgcttatatt 162  Q
    |||| |||||||||||||||    |||||| ||||||||| ||||||||| |||||| || |||| ||||  |||||||||||||    
T  9011788 ttcatttaatgatgtatgtggttcataatatagaccacatacatcattaaatgaatgaatctaaaaagtgaattttgcttatatt 9011872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 13743955 - 13743899
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||| ||||    
T  13743955 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 13743899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 18626757 - 18626805
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    |||||||||||||   ||||||||||| || ||||||||||||||||||    
T  18626757 aatgatgtatgtggtttataataaagatcatatgcatcattaattgaat 18626805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 21004037 - 21003981
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   ||||||  |||||| || ||||||||||||||||    
T  21004037 ttcaattaatgatgtatgtggtctataatgtagaccatatacatcattaattgaatg 21003981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 22493666 - 22493618
Alignment:
Q  86 aatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||||||||  |||||||||||||| || |||||| ||||||||    
T  22493666 aatgatgtatgtgatctataataaagaccatatacatcatcaattgaat 22493618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 23329413 - 23329469
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||| ||||||||||    
T  23329413 ttcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatg 23329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 23710932 - 23710876
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||| ||||||||||    
T  23710932 ttcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatg 23710876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 23754235 - 23754291
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  ||||||||  |||||||||||||||    
T  23754235 ttcaattaatgatgtatgtggtttataatacggaccacatatatcattaattgaatg 23754291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 24529670 - 24529614
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||   ||||||| ||||||||||||||||    
T  24529670 ttcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatg 24529614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 24529616 - 24529672
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  24529616 ttcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatg 24529672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 29978589 - 29978533
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  29978589 ttcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatg 29978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 32112357 - 32112413
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||    
T  32112357 ttcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatg 32112413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 49481977 - 49481921
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||   ||||||||||||||  ||||||||||| ||||||    
T  49481977 ttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatg 49481921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 49745506 - 49745562
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||| ||||    
T  49745506 ttcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatg 49745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 53333557 - 53333633
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttc 271  Q
    |||||| |||||| || |||||||| | |||||||||||||  ||||||| ||| ||||| ||||||| || |||||    
T  53333557 aaaaataaaaataatttataaatttcatgtagaaaaagttactttttaaacttttaatatcttgaatgcattatttc 53333633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 54164928 - 54164960
Alignment:
Q  149 tttttgcttatattagtgaccggagggtgtatt 181  Q
    |||||||||||| ||||||||||||||||||||    
T  54164928 tttttgcttataatagtgaccggagggtgtatt 54164960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 61195 - 61307
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tttttgcttatattagt 165  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||| |||||| ||||||||||    
T  61195 ttttagatacattcaattaatgatgtatgtgacatataataaag-ccacatacatcattaattgaatgtatctaaaatgtggatttttgtttatattagt 61293  T
Q  166 gaccggagggtgta 179  Q
    ||||||||||||||    
T  61294 gaccggagggtgta 61307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 61270 - 61156
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtatt--aaagagtggtttttgcttatattagt 165  Q
    |||||||||  |||||||||||||||||||| | | || || |   ||||| |||||||||||||||||||   ||| || | |||||||||||||||||    
T  61270 ttttagatacattcaattaatgatgtatgtggctt-tattatatgtcacatacatcattaattgaatgtatctaaaaaagggatttttgcttatattagt 61172  T
Q  166 gaccggagggtgtatt 181  Q
    ||||||||||||||||    
T  61171 gaccggagggtgtatt 61156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 54405 - 54533
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtg-gtt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||| |||||||||  ||    
T  54405 aagcaaaaatctactttttagatacattcaattaatgatgtatatgatatataataaggaccacatacatcattaattgaatgtatctaaagagtgaatt 54504  T
Q  151 tttgcttatattagtgaccggagggtgta 179  Q
    ||||||||||||||||| |||| ||||||    
T  54505 tttgcttatattagtgatcggatggtgta 54533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 54444 - 54382
Alignment:
Q  120 catcattaattgaatgtat-taaagagtgg-tttttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||||||||| |||| ||| | ||||||||||||||||| ||||||||||||||    
T  54444 catcattaattgaatgtatctaaaaagtagatttttgcttatattagtaaccggagggtgtat 54382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 181
Target Start/End: Complemental strand, 246918 - 246788
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||  |||||||||  ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| |||   ||    
T  246918 aagcaaaaatctactttttagatacattcaattaatgatgtatctgacatataataaaaaccacatacatcattaattgaatgtatctaaaaagtaaatt 246819  T
Q  151 tttgcttatattagtgaccggagggtgtatt 181  Q
    ||||||||||||||||||| || ||||||||    
T  246818 tttgcttatattagtgaccagacggtgtatt 246788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 246812 - 246941
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagtgg-tt 150  Q
    |||||||||||||  |||||||||  ||||||||||||||||||||   | || || |   || || ||||||||||||||||||| |||| ||| | ||    
T  246812 aagcaaaaatttactttttagatacattcaattaatgatgtatgtggtttttattatatgtcagatacatcattaattgaatgtatctaaaaagtagatt 246911  T
Q  151 tttgcttatattagtgaccggagggtgtat 180  Q
    ||||||||||||| ||||| ||||||||||    
T  246912 tttgcttatattaatgaccagagggtgtat 246941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 297
Target Start/End: Original strand, 79968 - 80073
Alignment:
Q  192 tacaaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttcttctct 291  Q
    |||| |||| |||||  ||||| ||||||| |||||||||||||| |||||||||||||||| ||||| || | ||||||||| |||| ||||||||| |    
T  79968 tacataaataaaaattattgatgaattttatgtagaaaaagttatattttaaagtttcaatacattgagtgcaccatttccaatacaacatttcttcttt 80067  T
Q  292 agtctt 297  Q
    ||||||    
T  80068 agtctt 80073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 17198 - 17306
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgta-ttaaagagtg--gtttttgcttatattag 164  Q
    ||||| |||| ||||||||||||||||||||||| |||||||| ||||| |  |||||||||| |||||| ||||| ||||   ||||| ||||||||||    
T  17198 ttttatatatattcaattaatgatgtatgtgacacataataaaaaccacgtatatcattaattaaatgtatttaaaaagtgaatttttttcttatattag 17297  T
Q  165 tgaccggag 173  Q
    ||| |||||    
T  17298 tgatcggag 17306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 17228 - 17161
Alignment:
Q  114 cacatgcatcattaattgaatgtat-taaagagtggtttttgcttatattagtgaccggagggtgtat 180  Q
    ||||| ||||||||||||||| ||| |||| ||||  |||||||||||||||||||||||||||||||    
T  17228 cacatacatcattaattgaatatatataaaaagtgaattttgcttatattagtgaccggagggtgtat 17161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 6310 - 6206
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtttttgcttatattagtgaccggagggt 176  Q
    |||| ||||||||||||||||  ||||||||||||||  ||||||||||| |||||| ||  |||  ||   |||||||||||||||||||| |||||||    
T  6310 ttcatttaatgatgtatgtgatctataataaagaccatgtgcatcattaaatgaatgaatcgaaaatgtaattttttgcttatattagtgactggagggt 6211  T
Q  177 gtatt 181  Q
    |||||    
T  6210 gtatt 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 5482 - 5429
Alignment:
Q  82 aattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||||||||||||||||   ||||||| ||||||||| ||||||||||||||||    
T  5482 aattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatg 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 11681 - 11625
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||   |||||||  |||||||| ||||||||||||||||    
T  11681 ttcaattaatgatgtatgtggtctataatatggaccacatacatcattaattgaatg 11625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 11627 - 11683
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||||||||||||||||||    ||| || ||||||||| ||||||||||||||||    
T  11627 ttcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaatg 11683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 7674 - 7805
Alignment:
Q  53 aagcaaaaatttatcttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatgtat-taaagagt-ggtt 150  Q
    |||||||||| ||| |||||| |   |||| |||||||||||||||   ||||||||||||||  ||||||||||| |||||| || ||||  || | ||    
T  7674 aagcaaaaatctatattttaggttcgttcatttaatgatgtatgtggtctataataaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatt 7773  T
Q  151 tttgcttatattagtgaccggagggtgtatta 182  Q
    |||||||||| ||||||| ||||  |||||||    
T  7774 tttgcttataatagtgacaggagtatgtatta 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 19123 - 19213
Alignment:
Q  195 aaaaatgaaaatagttgataaattttaagtagaaaaagttatcttttaaagtttcaatatattgaatgtatcatttccaagacaaaatttc 285  Q
    ||||||||||||||||||| | ||||| |||||| ||||||  | ||||||||||||| |  ||| | ||| ||| |||||| ||||||||    
T  19123 aaaaatgaaaatagttgatgagttttatgtagaacaagttacttgttaaagtttcaatgtgctgactatattattcccaagataaaatttc 19213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 89630 - 89696
Alignment:
Q  68 ttttagatattttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaat 134  Q
    ||||||||  ||||| | ||||||||||||||  ||||||||||| || || |||||||||||||||    
T  89630 ttttagattctttcattaaatgatgtatgtgatctataataaagatcatatacatcattaattgaat 89696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 1627 - 1667
Alignment:
Q  370 gaggcaagagacaagacagaaactgaaatttttgttcctca 410  Q
    |||||||| ||||||||| |||||||||||||||| |||||    
T  1627 gaggcaagggacaagacaaaaactgaaatttttgtccctca 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 17531 - 17475
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    |||| |||||||||||||||   ||||||| ||||||||| ||||||||| ||||||    
T  17531 ttcatttaatgatgtatgtggtttataatatagaccacatacatcattaaatgaatg 17475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 38050 - 38106
Alignment:
Q  79 ttcaattaatgatgtatgtgacatataataaagaccacatgcatcattaattgaatg 135  Q
    ||||| ||||||||||||||    |||||| ||||||||| ||||||||||||||||    
T  38050 ttcaactaatgatgtatgtggttcataatatagaccacatacatcattaattgaatg 38106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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