View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1384_low_1 (Length: 806)

Name: NF1384_low_1
Description: NF1384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1384_low_1
NF1384_low_1
[»] chr7 (40 HSPs)
chr7 (30-482)||(24228933-24229385)
chr7 (553-668)||(24228752-24228866)
chr7 (693-806)||(24228423-24228536)
chr7 (699-806)||(6602338-6602445)
chr7 (695-806)||(34776929-34777040)
chr7 (699-806)||(39859243-39859350)
chr7 (694-785)||(13169683-13169774)
chr7 (694-806)||(47386223-47386335)
chr7 (699-785)||(34775001-34775087)
chr7 (718-806)||(13168142-13168233)
chr7 (699-804)||(37796197-37796302)
chr7 (718-806)||(30940439-30940527)
chr7 (693-785)||(48227941-48228033)
chr7 (699-802)||(27666083-27666186)
chr7 (699-802)||(29996532-29996635)
chr7 (699-806)||(38474157-38474264)
chr7 (719-806)||(45359359-45359446)
chr7 (699-801)||(56333-56435)
chr7 (695-785)||(39857644-39857734)
chr7 (699-804)||(37115542-37115647)
chr7 (291-395)||(24225003-24225107)
chr7 (695-785)||(6605397-6605487)
chr7 (699-785)||(22155847-22155933)
chr7 (699-785)||(22211762-22211848)
chr7 (699-785)||(37113944-37114030)
chr7 (693-785)||(27664427-27664519)
chr7 (699-786)||(37791657-37791744)
chr7 (699-785)||(24226584-24226670)
chr7 (699-785)||(35401972-35402058)
chr7 (699-785)||(35403619-35403705)
chr7 (699-785)||(78014-78100)
chr7 (699-785)||(47384297-47384383)
chr7 (752-806)||(48852361-48852415)
chr7 (718-802)||(20478064-20478148)
chr7 (703-786)||(13039641-13039724)
chr7 (699-806)||(13018036-13018145)
chr7 (751-806)||(35693384-35693441)
chr7 (699-785)||(46437110-46437196)
chr7 (706-803)||(33038814-33038911)
chr7 (706-803)||(46812599-46812696)
[»] chr4 (28 HSPs)
chr4 (691-806)||(41761760-41761875)
chr4 (699-806)||(49523127-49523234)
chr4 (699-806)||(51011929-51012036)
chr4 (699-787)||(2693285-2693373)
chr4 (699-806)||(48813790-48813897)
chr4 (691-806)||(41781534-41781649)
chr4 (699-802)||(43519427-43519530)
chr4 (699-785)||(39345567-39345653)
chr4 (718-806)||(48646761-48646849)
chr4 (718-806)||(52868163-52868251)
chr4 (735-806)||(42980674-42980745)
chr4 (699-785)||(35401752-35401838)
chr4 (699-776)||(48645258-48645335)
chr4 (693-785)||(20493824-20493916)
chr4 (718-806)||(35404459-35404547)
chr4 (699-786)||(2691377-2691463)
chr4 (693-804)||(11601668-11601778)
chr4 (699-786)||(20819988-20820075)
chr4 (694-785)||(43507165-43507256)
chr4 (699-785)||(4173740-4173826)
chr4 (699-785)||(43508653-43508739)
chr4 (699-776)||(320909-320986)
chr4 (733-803)||(2350524-2350594)
chr4 (699-785)||(319276-319362)
chr4 (700-742)||(11254123-11254165)
chr4 (699-785)||(33266010-33266096)
chr4 (706-767)||(4520471-4520532)
chr4 (706-803)||(44558510-44558607)
[»] chr3 (42 HSPs)
chr3 (699-805)||(2226187-2226293)
chr3 (699-806)||(53190793-53190900)
chr3 (699-806)||(54898440-54898547)
chr3 (694-806)||(27899115-27899227)
chr3 (699-806)||(21348726-21348833)
chr3 (699-806)||(51684613-51684720)
chr3 (718-806)||(35905746-35905834)
chr3 (699-806)||(17515313-17515420)
chr3 (699-806)||(30599952-30600059)
chr3 (699-806)||(43765140-43765247)
chr3 (696-806)||(2377029-2377139)
chr3 (699-806)||(46112490-46112597)
chr3 (711-785)||(23291585-23291659)
chr3 (694-806)||(42279505-42279617)
chr3 (699-806)||(41977753-41977860)
chr3 (721-802)||(3152256-3152337)
chr3 (692-802)||(44794204-44794313)
chr3 (705-802)||(2660221-2660318)
chr3 (699-776)||(48829359-48829436)
chr3 (693-785)||(30598334-30598426)
chr3 (693-785)||(44267978-44268070)
chr3 (693-785)||(54412547-54412639)
chr3 (694-785)||(53094273-53094364)
chr3 (718-804)||(23293206-23293292)
chr3 (699-785)||(38193510-38193596)
chr3 (699-785)||(41979352-41979438)
chr3 (699-785)||(46308810-46308896)
chr3 (699-785)||(46310436-46310522)
chr3 (728-785)||(46114105-46114162)
chr3 (751-806)||(46197775-46197830)
chr3 (759-806)||(48830840-48830887)
chr3 (699-785)||(3150255-3150341)
chr3 (699-785)||(46609152-46609238)
chr3 (699-785)||(54900074-54900160)
chr3 (699-776)||(600728-600805)
chr3 (699-785)||(7883331-7883417)
chr3 (699-785)||(38191898-38191984)
chr3 (699-785)||(53092626-53092712)
chr3 (699-785)||(53187745-53187831)
chr3 (706-803)||(2977346-2977443)
chr3 (706-803)||(23774162-23774259)
chr3 (699-776)||(51686403-51686480)
[»] chr2 (25 HSPs)
chr2 (693-806)||(16763073-16763186)
chr2 (693-806)||(39664782-39664895)
chr2 (706-804)||(40560233-40560331)
chr2 (693-806)||(2766931-2767044)
chr2 (696-806)||(17696206-17696316)
chr2 (694-806)||(14389118-14389230)
chr2 (699-806)||(44709779-44709886)
chr2 (699-806)||(19908280-19908388)
chr2 (699-806)||(39455172-39455279)
chr2 (696-785)||(6799408-6799497)
chr2 (699-776)||(19581417-19581494)
chr2 (700-806)||(42519239-42519346)
chr2 (699-785)||(16376739-16376825)
chr2 (717-806)||(6797528-6797617)
chr2 (696-776)||(19906682-19906762)
chr2 (732-806)||(16377231-16377305)
chr2 (699-785)||(34400317-34400403)
chr2 (711-785)||(39663169-39663243)
chr2 (718-802)||(24208080-24208164)
chr2 (699-785)||(14387352-14387438)
chr2 (699-785)||(16764611-16764697)
chr2 (707-804)||(37645498-37645595)
chr2 (752-803)||(15432384-15432435)
chr2 (699-785)||(40561878-40561964)
chr2 (699-740)||(42517561-42517602)
[»] chr5 (24 HSPs)
chr5 (699-806)||(17574321-17574428)
chr5 (699-806)||(36057627-36057734)
chr5 (699-805)||(7267846-7267952)
chr5 (699-806)||(34327638-34327745)
chr5 (693-802)||(24541230-24541339)
chr5 (699-806)||(2179790-2179897)
chr5 (694-804)||(8539673-8539783)
chr5 (699-785)||(8541271-8541357)
chr5 (699-785)||(12738736-12738822)
chr5 (699-785)||(12801559-12801645)
chr5 (699-785)||(30463903-30463989)
chr5 (705-806)||(30468294-30468395)
chr5 (699-785)||(21842992-21843078)
chr5 (693-785)||(7269446-7269538)
chr5 (689-785)||(28822090-28822186)
chr5 (696-787)||(43492131-43492222)
chr5 (699-776)||(41493847-41493924)
chr5 (718-802)||(29621799-29621883)
chr5 (751-806)||(18625022-18625077)
chr5 (728-785)||(28813765-28813822)
chr5 (718-802)||(42473625-42473709)
chr5 (699-794)||(2854353-2854447)
chr5 (718-785)||(29620160-29620227)
chr5 (699-785)||(2852889-2852975)
[»] chr1 (33 HSPs)
chr1 (699-806)||(31238509-31238616)
chr1 (699-806)||(2869582-2869689)
chr1 (699-806)||(27087286-27087393)
chr1 (690-794)||(3013502-3013606)
chr1 (690-806)||(4855980-4856096)
chr1 (699-806)||(37344345-37344452)
chr1 (691-802)||(46583574-46583685)
chr1 (699-806)||(50556111-50556218)
chr1 (693-806)||(6818692-6818805)
chr1 (699-806)||(25278382-25278489)
chr1 (699-806)||(34778152-34778259)
chr1 (693-794)||(25278979-25279080)
chr1 (751-806)||(15104496-15104551)
chr1 (721-804)||(51896168-51896251)
chr1 (699-785)||(2871076-2871162)
chr1 (699-785)||(31236822-31236908)
chr1 (699-785)||(25276745-25276831)
chr1 (696-794)||(33602670-33602768)
chr1 (696-785)||(3011855-3011944)
chr1 (711-785)||(33599233-33599307)
chr1 (699-785)||(37345962-37346048)
chr1 (699-776)||(25278857-25278934)
chr1 (699-776)||(52641891-52641968)
chr1 (698-787)||(52643648-52643737)
chr1 (699-785)||(26223590-26223676)
chr1 (699-785)||(34776572-34776658)
chr1 (699-785)||(46582013-46582099)
chr1 (691-772)||(37088149-37088230)
chr1 (696-785)||(51894567-51894656)
chr1 (699-783)||(8167945-8168029)
chr1 (718-802)||(9121686-9121770)
chr1 (699-785)||(8169568-8169654)
chr1 (706-803)||(18183960-18184057)
[»] chr8 (33 HSPs)
chr8 (699-806)||(8609821-8609928)
chr8 (699-806)||(13282481-13282588)
chr8 (695-806)||(26242348-26242459)
chr8 (694-806)||(38547226-38547338)
chr8 (699-806)||(7745146-7745253)
chr8 (695-806)||(41825678-41825789)
chr8 (713-806)||(41042618-41042711)
chr8 (699-806)||(13108370-13108477)
chr8 (699-802)||(27691157-27691260)
chr8 (697-804)||(42941775-42941882)
chr8 (699-785)||(42943426-42943512)
chr8 (718-806)||(13486133-13486221)
chr8 (699-776)||(34681075-34681152)
chr8 (699-804)||(22272337-22272444)
chr8 (699-806)||(5036448-5036555)
chr8 (699-785)||(22273891-22273977)
chr8 (699-776)||(26238729-26238806)
chr8 (693-785)||(33761066-33761158)
chr8 (751-806)||(9673199-9673254)
chr8 (711-785)||(13106819-13106893)
chr8 (695-785)||(13283995-13284085)
chr8 (693-785)||(33762713-33762805)
chr8 (694-785)||(38548831-38548922)
chr8 (699-785)||(601704-601790)
chr8 (699-785)||(5038062-5038147)
chr8 (699-785)||(27692837-27692923)
chr8 (705-764)||(13484554-13484613)
chr8 (751-806)||(40339714-40339769)
chr8 (699-785)||(29239187-29239273)
chr8 (699-785)||(35509217-35509303)
chr8 (706-803)||(462387-462484)
chr8 (694-743)||(41040718-41040767)
chr8 (711-776)||(41823905-41823970)
[»] chr6 (19 HSPs)
chr6 (693-806)||(32439105-32439218)
chr6 (720-806)||(20523390-20523476)
chr6 (697-806)||(7372972-7373081)
chr6 (694-802)||(13613600-13613708)
chr6 (751-806)||(9398715-9398770)
chr6 (707-806)||(14338489-14338588)
chr6 (706-804)||(10568409-10568507)
chr6 (699-785)||(32518497-32518583)
chr6 (699-776)||(10569928-10570005)
chr6 (690-806)||(6899479-6899595)
chr6 (699-765)||(7371178-7371244)
chr6 (699-785)||(9400035-9400121)
chr6 (699-785)||(20525334-20525420)
chr6 (699-804)||(32516880-32516985)
chr6 (718-802)||(3456770-3456854)
chr6 (699-806)||(11355225-11355332)
chr6 (688-785)||(32454240-32454337)
chr6 (711-776)||(13610705-13610770)
chr6 (699-776)||(21068628-21068705)
[»] scaffold0058 (3 HSPs)
scaffold0058 (699-802)||(3297-3400)
scaffold0058 (699-802)||(4469-4572)
scaffold0058 (699-785)||(14343-14429)
[»] scaffold1454 (1 HSPs)
scaffold1454 (696-806)||(1263-1373)
[»] scaffold0564 (1 HSPs)
scaffold0564 (699-787)||(8265-8353)
[»] scaffold0004 (1 HSPs)
scaffold0004 (699-785)||(106673-106757)
[»] scaffold0002 (1 HSPs)
scaffold0002 (705-772)||(436274-436341)


Alignment Details
Target: chr7 (Bit Score: 429; Significance: 0; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 30 - 482
Target Start/End: Complemental strand, 24229385 - 24228933
Alignment:
Q  30 gatgtcggattcaattccgacgccgacgaatctgttgttagggttagagaggaaggtgaagaggaaagtggggatggagggggaatggatgagttggaat 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229385 gatgtcggattcaattccgacgccgacgaatctgttgttagggttagagaggaaggtgaagaggaaagtggggatggagggggaatggatgagttggaat 24229286  T
Q  130 ataagacagcggttgttggtgtagagttgaagagtggcggctgggttggattggccgcgttgggagtttggacgccattcgatgtcaaggccgatgattg 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229285 ataagacagcggttgttggtgtagagttgaagagtggcggctgggttggattggccgcgttgggagtttggacgccattcgatgtcaaggccgatgattg 24229186  T
Q  230 cgggggagagggattgggtttcgaggagccaagattcgacgtggataggggaacaggtgaggagggtttggattgtgagggtggtgtcgatggtgatgga 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229185 cgggggagagggattgggtttcgaggagccaagattcgacgtggatgggggaacaggtgaggagggtttggattgtgagggtggtgtcgatggtgatgga 24229086  T
Q  330 gtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtgatgttgaagggtgatggtgtgagatttgggttggggattggcatgttaatggga 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||  ||||||    
T  24229085 gtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtgatgttgaagggtgatggtgtggggtttgggttggggattggcatgtagatggga 24228986  T
Q  430 ttgtcgttttggtcaacgagggtgatcggcattttgaaatttggttgattggt 482  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24228985 ttgtcgttttggtcaacgagggtgatcggcattttgaaatttgggtgattggt 24228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 553 - 668
Target Start/End: Complemental strand, 24228866 - 24228752
Alignment:
Q  553 tattgtggggtggacggggcgtgagtggaggagtgagtgagacgagtggggtagtcacggaagtgaggtgtaatagtgtagtgtttgctaaagattctgg 652  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  24228866 tattgtggggtggacggggcgtgagtggaggagtgagtgagacgagtggggtagtcacggaagtgaggtgtaatagtgtagtgtttgttaaagatt-tgg 24228768  T
Q  653 acatttgactggctga 668  Q
    | |||||| |||||||    
T  24228767 atatttgattggctga 24228752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 693 - 806
Target Start/End: Complemental strand, 24228536 - 24228423
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||||||||| ||||| |||||  ||||||||| |||||| |||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||    
T  24228536 aatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagac 24228437  T
Q  793 gttcatcaaaatgg 806  Q
    || |||||||||||    
T  24228436 gtccatcaaaatgg 24228423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 6602338 - 6602445
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||| | ||||||||| |||||||||| ||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  6602338 taataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 6602437  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  6602438 caaaatgg 6602445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 695 - 806
Target Start/End: Complemental strand, 34777040 - 34776929
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 794  Q
    ||||||||| ||||| |||||  || |||||| |||||| ||||||||| || |  |||||||||||||||||||||||||| |||||||||||||||||    
T  34777040 tgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgt 34776941  T
Q  795 tcatcaaaatgg 806  Q
     |||||||||||    
T  34776940 ccatcaaaatgg 34776929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 39859350 - 39859243
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||| | |    
T  39859350 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgt 39859251  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  39859250 caaaatgg 39859243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 694 - 785
Target Start/End: Complemental strand, 13169774 - 13169683
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  13169774 atgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 694 - 806
Target Start/End: Complemental strand, 47386335 - 47386223
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| || |||||| ||||||| | ||||||  |||  |||||||||||||||| |||||||||||| |||||||||||||    
T  47386335 atgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacg 47386236  T
Q  794 ttcatcaaaatgg 806  Q
    | |||||||||||    
T  47386235 tccatcaaaatgg 47386223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 34775001 - 34775087
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||| || || ||||||||| ||||| |||||||||| ||||||||    
T  34775001 taatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 718 - 806
Target Start/End: Original strand, 13168142 - 13168233
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc---tctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||    ||||||||||||||||| |||||||||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatgg 13168233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 699 - 804
Target Start/End: Complemental strand, 37796302 - 37796197
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| || ||| ||||||||| ||||||| ||||||||  |||   ||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  799 caaaat 804  Q
    ||||||    
T  37796202 caaaat 37796197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 30940527 - 30940439
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| ||||||||||||||||  ||    |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||    
T  30940527 ttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgttcatcaaaatgg 30940439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 693 - 785
Target Start/End: Complemental strand, 48228033 - 48227941
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||| ||||||  ||   |||||||||||||||||||||| ||| ||||||||    
T  48228033 aatgattaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 802
Target Start/End: Complemental strand, 27666186 - 27666083
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||| |||| |||    
T  27666186 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccat 27666087  T
Q  799 caaa 802  Q
    ||||    
T  27666086 caaa 27666083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 802
Target Start/End: Complemental strand, 29996635 - 29996532
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||  ||||||||||||||||| | ||| || ||||||||||||||||| |||    
T  29996635 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccat 29996536  T
Q  799 caaa 802  Q
    ||||    
T  29996535 caaa 29996532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 38474264 - 38474157
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| || ||| | ||||||||||||||||| ||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||   ||    
T  38474264 taatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctat 38474165  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  38474164 caaaatgg 38474157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 806
Target Start/End: Original strand, 45359359 - 45359446
Alignment:
Q  719 tgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||| ||||||||| |||||   |||  ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  45359359 tgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatgg 45359446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 801
Target Start/End: Original strand, 56333 - 56435
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  56333 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 56432  T
Q  799 caa 801  Q
    |||    
T  56433 caa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 695 - 785
Target Start/End: Original strand, 39857644 - 39857734
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| | ||||||    
T  39857644 tgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 699 - 804
Target Start/End: Complemental strand, 37115647 - 37115542
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||| | ||||||  | |  ||||||||| |||||||||||||||  ||||||||||||||||| |||    
T  37115647 taatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccat 37115548  T
Q  799 caaaat 804  Q
    ||||||    
T  37115547 caaaat 37115542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 24225003 - 24225107
Alignment:
Q  291 gagggtttggattgtgagggtggtgtcgatggtgatggagtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtgatgttgaagggtgat 390  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| ||||  ||||||| |||||||| || |||||| |||| ||| | |    
T  24225003 gagggattggattgtgaaggtggagtcgaaggtgatggagtaggtgtcgtgggtatcgtgagggaggttgttgtcgatgatggtgattttgatgggagtt 24225102  T
Q  391 ggtgt 395  Q
    |||||    
T  24225103 ggtgt 24225107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 695 - 785
Target Start/End: Complemental strand, 6605487 - 6605397
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||| ||||| || ||| ||||||||| ||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||||||||    
T  6605487 tgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 22155933 - 22155847
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||||  |||| ||||||||| ||||| |||||| ||| ||||||||    
T  22155933 taatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 22211848 - 22211762
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||||  |||| ||||||||| ||||| |||||| ||| ||||||||    
T  22211848 taatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 37113944 - 37114030
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| |||||| || |||||| ||||  |||||||||||||||||||||||||| || |||||    
T  37113944 taatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Original strand, 27664427 - 27664519
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| ||||| || ||| ||||||||| ||||||||||||| ||| |||  ||||||||| ||||||| | |||||| ||||||||    
T  27664427 aatgattaatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 699 - 786
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 786  Q
    ||||| || |||||||||||| |||||| ||||||| |||||||| ||||   |||||||| |||||||||||||||| || ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 24226584 - 24226670
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||| |||||| |||  |||||||    
T  24226584 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 35401972 - 35402058
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35401972 taatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 35403705 - 35403619
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35403705 taatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 78100 - 78014
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  |||  ||||||||| ||||||| | || ||| ||||||||    
T  78100 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 47384297 - 47384383
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||  ||||||||  |||  ||||||||||||||||||| |||||| | ||||||    
T  47384297 taatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 752 - 806
Target Start/End: Complemental strand, 48852415 - 48852361
Alignment:
Q  752 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||| ||||||||||||| ||  |||||||||||||||| |||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatgg 48852361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 802
Target Start/End: Original strand, 20478064 - 20478148
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  | |  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||    
T  20478064 ttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 20478148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 786
Target Start/End: Complemental strand, 13039724 - 13039641
Alignment:
Q  703 atctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 786  Q
    ||||||| |||||| ||||||||| |||||||   ||||||  |||   |||||||||||||| |||||||||| |||||||||    
T  13039724 atctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 13018036 - 13018145
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatat--ctatttagtctctgaattttacagacgttc 796  Q
    ||||| ||||| ||| || ||||||||| ||||||| ||||||||  |||   ||||| |||||||||  ||||||  ||||||||||| ||| |||| |    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  797 atcaaaatgg 806  Q
    ||||||||||    
T  13018136 atcaaaatgg 13018145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 751 - 806
Target Start/End: Complemental strand, 35693441 - 35693384
Alignment:
Q  751 gaattttgcgaaatatctat--ttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||| ||||||| |  |||||| ||||||||||||||||| |||||||||||    
T  35693441 gaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatgg 35693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 46437110 - 46437196
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  ||   ||||||||||||||| |||||| |||  |||||||    
T  46437110 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 33038911 - 33038814
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| |||||| |||||||||||    |||| |||||| ||||   |||| ||||||||||| | |||||| ||||||||| ||||||| ||||||||    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaa 33038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 46812696 - 46812599
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    ||||||||||| |||||||||||  | ||||||||||| ||||   ||||  | |||||||| |||||||| || |||||  ||||||| ||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaa 46812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 691 - 806
Target Start/End: Complemental strand, 41761875 - 41761760
Alignment:
Q  691 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 790  Q
    ||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||  |||   ||||||||||||||||||||||||| |||||||||||||    
T  41761875 ataatgattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacag 41761776  T
Q  791 acgttcatcaaaatgg 806  Q
    |||| |||||||||||    
T  41761775 acgtccatcaaaatgg 41761760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 49523127 - 49523234
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||||| |||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  49523127 taatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 49523226  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  49523227 caaaatgg 49523234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 51011929 - 51012036
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||||||||| |||||| ||||||||| ||||||||| ||||||  | |  |||||||||||||||||||||||||||||||||||||||||||| |||    
T  51011929 taatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 51012028  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  51012029 caaaatgg 51012036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 699 - 787
Target Start/End: Complemental strand, 2693373 - 2693285
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttta 787  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||| |   |||||||||||||||||||||||||| |||||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta 2693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 48813790 - 48813897
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||| |||||||||||||  ||||||||| |||||| ||||||||  |||||||||| |||||| |||    
T  48813790 taatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtccat 48813889  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  48813890 caaaatgg 48813897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 691 - 806
Target Start/End: Original strand, 41781534 - 41781649
Alignment:
Q  691 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 790  Q
    ||||||| ||||| ||||| || ||  ||||||||| ||||||||| ||||||| |||  ||||||||| |||||| ||||||||| |||||||||||||    
T  41781534 ataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacag 41781633  T
Q  791 acgttcatcaaaatgg 806  Q
    || | |||||||||||    
T  41781634 acatccatcaaaatgg 41781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 802
Target Start/End: Original strand, 43519427 - 43519530
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||| |||| |||    
T  43519427 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccat 43519526  T
Q  799 caaa 802  Q
    ||||    
T  43519527 caaa 43519530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 39345567 - 39345653
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| |||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||| |||||||||| ||||||||    
T  39345567 taatatttcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 48646849 - 48646761
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| |||| || || |||||  |||  |||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  48646849 ttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatgg 48646761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 52868251 - 52868163
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| ||||||||| ||||||  || |  |||||||||||||||||||||||||||||||||| |||||||   ||||||||||    
T  52868251 ttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatgg 52868163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 735 - 806
Target Start/End: Original strand, 42980674 - 42980745
Alignment:
Q  735 ggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||| |||| ||||||| |||||| ||||||||||| || |||||||||||||| |||||||||||    
T  42980674 ggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatgg 42980745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 35401752 - 35401838
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||| |||||||||||||||||  |||||||    
T  35401752 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 48645258 - 48645335
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||| | ||||||  |||| ||||||||||||||||||||||||||    
T  48645258 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtc 48645335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Original strand, 20493824 - 20493916
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||| ||||||||| ||| ||||||||||||  | |  |||||||||||||||||||||||||  ||||||||    
T  20493824 aatgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 35404547 - 35404459
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| |||||||||| |||||  |||   ||||||||||||||| |||||| || ||||||||||||||||| || ||||||||    
T  35404547 ttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatgg 35404459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 699 - 786
Target Start/End: Original strand, 2691377 - 2691463
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 786  Q
    ||||| ||||||||| |||| ||||||| ||||||| ||||||||  ||||  |||||||| |||||||||||||||| |||||||||    
T  2691377 taatacctcaacttcatctt-gaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 693 - 804
Target Start/End: Original strand, 11601668 - 11601778
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| || || |||||  ||||||||| ||||||| | |||||||||||   |||||||| |||||| |||| |||| |||||||||||||||    
T  11601668 aatgagtaatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagac 11601766  T
Q  793 gttcatcaaaat 804  Q
    || |||||||||    
T  11601767 gtccatcaaaat 11601778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 699 - 786
Target Start/End: Original strand, 20819988 - 20820075
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 786  Q
    ||||| |||||||||||| ||||||||| ||||||| | ||||||||| |   |||||||| |||||| ||||||||| |||||||||    
T  20819988 taatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 694 - 785
Target Start/End: Original strand, 43507165 - 43507256
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  43507165 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 4173826 - 4173740
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  4173826 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 43508739 - 43508653
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  43508739 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 776
Target Start/End: Complemental strand, 320986 - 320909
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | ||||||    
T  320986 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtc 320909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 733 - 803
Target Start/End: Complemental strand, 2350594 - 2350524
Alignment:
Q  733 tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||||||||||| |||   |||| ||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  2350594 tcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaa 2350524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 319276 - 319362
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||  ||||||||    
T  319276 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 742
Target Start/End: Original strand, 11254123 - 11254165
Alignment:
Q  700 aatatctcaacttcgtctttgaatttttaaaaatcggccaaat 742  Q
    |||| ||||| |||||| |||||||||||||||||||||||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaat 11254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 33266096 - 33266010
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||  ||||||||| |||||||||| || ||  | |  ||||||||||||||||| | |||||| ||||||||    
T  33266096 taatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 767
Target Start/End: Complemental strand, 4520532 - 4520471
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatc 767  Q
    ||||||||||| |||||||||||  | ||||||||||| |||||  |||| |||||||||||    
T  4520532 tcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatc 4520471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 44558607 - 44558510
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    ||||||||||| ||||||||| |    ||||||||||| ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| ||||||||    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 44558510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 1e-31; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 699 - 805
Target Start/End: Complemental strand, 2226293 - 2226187
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  2226293 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 2226194  T
Q  799 caaaatg 805  Q
    |||||||    
T  2226193 caaaatg 2226187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 53190900 - 53190793
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  53190900 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 53190801  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  53190800 caaaatgg 53190793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 54898440 - 54898547
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  54898440 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 54898539  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  54898540 caaaatgg 54898547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 694 - 806
Target Start/End: Complemental strand, 27899227 - 27899115
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||    
T  27899227 atgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacg 27899128  T
Q  794 ttcatcaaaatgg 806  Q
    | ||| |||||||    
T  27899127 tccataaaaatgg 27899115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 21348726 - 21348833
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  21348726 taatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 21348825  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  21348826 caaaatgg 21348833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 51684613 - 51684720
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||||||||| |||||| ||||||||| ||||||| |||||||| ||||  ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  51684613 taatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccat 51684712  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  51684713 caaaatgg 51684720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 35905834 - 35905746
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35905834 ttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatgg 35905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 17515313 - 17515420
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| ||| || |||||||||||||||| ||||||||| |||   |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  17515313 taatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 17515412  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  17515413 caaaatgg 17515420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 30600059 - 30599952
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| || |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||| ||||||  ||    
T  30600059 taatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgat 30599960  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  30599959 caaaatgg 30599952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 43765140 - 43765247
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  | |  ||||||||||||||||||||||||| |||||||||||||||||| |||    
T  43765140 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccat 43765239  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  43765240 caaaatgg 43765247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 696 - 806
Target Start/End: Original strand, 2377029 - 2377139
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 795  Q
    |||||||| ||||| ||||| |||||||||| |||||| | |||||||  |||  ||||||||| ||| || |||||||||||||||||||||||||||     
T  2377029 gattaatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtc 2377128  T
Q  796 catcaaaatgg 806  Q
    |||||||||||    
T  2377129 catcaaaatgg 2377139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 46112490 - 46112597
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |    ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  46112490 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 46112589  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  46112590 caaaatgg 46112597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 23291585 - 23291659
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||    
T  23291585 ttcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 694 - 806
Target Start/End: Original strand, 42279505 - 42279617
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||| ||  ||||  ||  |||||||||| |||||||||||||||| ||||||||||||||||    
T  42279505 atgagtaatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacg 42279604  T
Q  794 ttcatcaaaatgg 806  Q
    |  ||||||||||    
T  42279605 tctatcaaaatgg 42279617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 41977753 - 41977860
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  |||||| |||||||||| | |||||| ||||||||||||||||| | |    
T  41977753 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgt 41977852  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  41977853 caaaatgg 41977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 721 - 802
Target Start/End: Complemental strand, 3152337 - 3152256
Alignment:
Q  721 aatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    |||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||||||||||| |||||||    
T  3152337 aattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 3152256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 692 - 802
Target Start/End: Original strand, 44794204 - 44794313
Alignment:
Q  692 taatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacaga 791  Q
    |||||| ||||| ||||| |||||| ||||||||| |||| |||||||| || ||||  ||||||||||||||||| | |||||| ||||||||| ||||    
T  44794204 taatgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcaga 44794302  T
Q  792 cgttcatcaaa 802  Q
     || |||||||    
T  44794303 agtccatcaaa 44794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 705 - 802
Target Start/End: Original strand, 2660221 - 2660318
Alignment:
Q  705 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||| |||||| ||||||||| |||||||| |||| ||  |||  ||||||||||||||||| | ||||||  |||||||||||||||| |||||||    
T  2660221 ctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaa 2660318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 48829359 - 48829436
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| |||| || ||||||||||| |  ||||||||||||||||||||||||||    
T  48829359 taatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtc 48829436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Original strand, 30598334 - 30598426
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||| ||||||| |||  ||||||||||||||| |||||| |||  |||||||    
T  30598334 aatgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Original strand, 44267978 - 44268070
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||| ||||||||| |||||||||||||||| |||   ||||||||||||||| |||||| |||  |||||||    
T  44267978 aatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Complemental strand, 54412639 - 54412547
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||||||||| ||||||  |||||||| |||||| || ||||||  |||  ||||||||||| |||||||||||||  ||||||||    
T  54412639 aatgattaatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 694 - 785
Target Start/End: Complemental strand, 53094364 - 53094273
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  53094364 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 718 - 804
Target Start/End: Complemental strand, 23293292 - 23293206
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    ||||||||  ||||||| ||||||||   ||  ||||||||||||||||||||||||||  ||||||||||| |||| |||||||||    
T  23293292 ttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaat 23293206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 38193596 - 38193510
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  38193596 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 41979438 - 41979352
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  41979438 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 46308810 - 46308896
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46308810 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 46310522 - 46310436
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46310522 taatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 728 - 785
Target Start/End: Complemental strand, 46114162 - 46114105
Alignment:
Q  728 aaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||  |||||||    
T  46114162 aaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 751 - 806
Target Start/End: Original strand, 46197775 - 46197830
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| ||| |||||||    
T  46197775 gaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatgg 46197830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 759 - 806
Target Start/End: Complemental strand, 48830887 - 48830840
Alignment:
Q  759 cgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  48830887 cgaaatatctatttagtctttgaattttacggacgtccatcaaaatgg 48830840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 3150255 - 3150341
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  3150255 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 46609152 - 46609238
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||  ||||||||| ||||||||||||| ||  |||  |||||||| |||||||| | |||||| ||||||||    
T  46609152 taatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 54900160 - 54900074
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | || ||| ||||||||    
T  54900160 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 600728 - 600805
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| ||| || ||||||||| |||||||| |||||||| | || ||||||| | ||||||||||||||||    
T  600728 taatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 7883331 - 7883417
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  |||   ||||||| |||||||| | |||||  ||||||||    
T  7883331 taatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 38191898 - 38191984
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| || |||||| |||||| |||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  38191898 taatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 53092626 - 53092712
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||||||| |||||| |||||| |||||| ||  |||  ||||||||||||||||| | ||| || ||||||||    
T  53092626 taatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 53187745 - 53187831
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  53187745 taatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 2977443 - 2977346
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| |||||| |||||||||||  ||||||||||||| ||||   |||| ||||||||||| ||| |||| || |||||  || |||| ||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaa 2977346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Original strand, 23774162 - 23774259
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| |||||| ||||||||| |  | |||||||||||  |||   |||| ||||||||||| |||||||| ||||||||  ||||||| ||||||||    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaa 23774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 776
Target Start/End: Complemental strand, 51686480 - 51686403
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| || |||||| ||||||| ||||||||  |||   ||||||||||||||| |||||||||    
T  51686480 taatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtc 51686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 693 - 806
Target Start/End: Original strand, 16763073 - 16763186
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  16763073 aatgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 16763172  T
Q  793 gttcatcaaaatgg 806  Q
    || |||||||||||    
T  16763173 gtccatcaaaatgg 16763186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 693 - 806
Target Start/End: Complemental strand, 39664895 - 39664782
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||| |||||||||||||||||| |||||||||||||||    
T  39664895 aatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagac 39664796  T
Q  793 gttcatcaaaatgg 806  Q
    || |||||||||||    
T  39664795 gtccatcaaaatgg 39664782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 706 - 804
Target Start/End: Original strand, 40560233 - 40560331
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    |||| |||||||||||||||| ||||||| ||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  40560233 tcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaat 40560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 693 - 806
Target Start/End: Original strand, 2766931 - 2767044
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||||||||||||| |||| |  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  2766931 aatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagac 2767030  T
Q  793 gttcatcaaaatgg 806  Q
    ||  ||||||||||    
T  2767031 gtctatcaaaatgg 2767044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 696 - 806
Target Start/End: Original strand, 17696206 - 17696316
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 795  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||| ||||  ||||||||  |||||||||||||||| |||||||||||| ||||     
T  17696206 gattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtc 17696305  T
Q  796 catcaaaatgg 806  Q
     ||||||||||    
T  17696306 aatcaaaatgg 17696316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 694 - 806
Target Start/End: Complemental strand, 14389230 - 14389118
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||| || | |    
T  14389230 atgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatg 14389131  T
Q  794 ttcatcaaaatgg 806  Q
    | |||||||||||    
T  14389130 tccatcaaaatgg 14389118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 44709886 - 44709779
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||| ||||||||||   ||  ||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  44709886 taatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccat 44709787  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  44709786 caaaatgg 44709779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 19908388 - 19908280
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaa-tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttca 797  Q
    ||||| ||||| |||||| ||||||||| ||||| |||||||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||| |     
T  19908388 taatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccg 19908289  T
Q  798 tcaaaatgg 806  Q
    |||||||||    
T  19908288 tcaaaatgg 19908280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 39455172 - 39455279
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||||||||| || ||| ||||||||| |||||||||  ||||| |  |  ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  39455172 taatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 39455271  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  39455272 caaaatgg 39455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 696 - 785
Target Start/End: Complemental strand, 6799497 - 6799408
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||  |||| ||||||||| ||||| |||||| |||  |||||||    
T  6799497 gattaatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 19581417 - 19581494
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| || |||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||    
T  19581417 taatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtc 19581494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 700 - 806
Target Start/End: Complemental strand, 42519346 - 42519239
Alignment:
Q  700 aatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaatttt-gcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    |||| ||||| |||||| ||||||||| |||||| |  ||||||  |||  ||||||| || |||||||||||||||| ||||||||||||||||| |||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  42519246 caaaatgg 42519239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 16376739 - 16376825
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||||||  |||  ||||||| ||||||| |||||||||| ||||||||    
T  16376739 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 806
Target Start/End: Original strand, 6797528 - 6797617
Alignment:
Q  717 tttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||| |||||| ||| |||||  | |  |||||||||||||||||||||||||| || ||||||||||||||  ||||||||||    
T  6797528 tttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatgg 6797617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 696 - 776
Target Start/End: Original strand, 19906682 - 19906762
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    |||||||| || || |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||||||||||||    
T  19906682 gattaataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 19906762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 732 - 806
Target Start/End: Complemental strand, 16377305 - 16377231
Alignment:
Q  732 atcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||| ||||||| |||  ||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatgg 16377231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 34400317 - 34400403
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||| || ||||||||| |||||||||||||||| ||||  ||||||||||||||| |||||| |||  |||||||    
T  34400317 taatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 39663169 - 39663243
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| ||||||||||||||||||| ||||||  |||  ||||||||| ||||| |||||||||| ||||||||    
T  39663169 ttcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 718 - 802
Target Start/End: Complemental strand, 24208164 - 24208080
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  |||  ||||| | ||||||||| | |||||| ||||||||||||||||| |||||||    
T  24208164 ttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 24208080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 14387352 - 14387438
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  14387352 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 16764697 - 16764611
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| | ||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  16764697 taatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 707 - 804
Target Start/End: Original strand, 37645498 - 37645595
Alignment:
Q  707 caacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    |||||||||| ||||||||||||||||| | | ||||  |||   ||||||  |||||||||||||||||  |||||||| |||| ||| ||||||||    
T  37645498 caacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttatcaaaat 37645595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 803
Target Start/End: Original strand, 15432384 - 15432435
Alignment:
Q  752 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| ||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  15432384 aattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaa 15432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 40561964 - 40561878
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  ||   |||||||| |||||| | | |||||| ||||||||    
T  40561964 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 740
Target Start/End: Original strand, 42517561 - 42517602
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaa 740  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  42517561 taatacctcaaattcgtccttgaatttttaaaaatcggccaa 42517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 6e-30; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 17574321 - 17574428
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  17574321 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 17574420  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  17574421 caaaatgg 17574428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 36057734 - 36057627
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||| | ||||||||||||||||| |||    
T  36057734 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccat 36057635  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  36057634 caaaatgg 36057627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 699 - 805
Target Start/End: Original strand, 7267846 - 7267952
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||| |||||||  ||   |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  7267846 taatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 7267945  T
Q  799 caaaatg 805  Q
    |||||||    
T  7267946 caaaatg 7267952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 34327638 - 34327745
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| |||||||||  ||||| |||||||||  ||   |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  34327638 taatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34327737  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  34327738 caaaatgg 34327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 693 - 802
Target Start/End: Complemental strand, 24541339 - 24541230
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||||||    
T  24541339 aatgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagac 24541240  T
Q  793 gttcatcaaa 802  Q
    || |||||||    
T  24541239 gtccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 2179790 - 2179897
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||||||  |||  |||||||| |||||||||||||| || ||||||||||||||| | |||    
T  2179790 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccat 2179889  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  2179890 caaaatgg 2179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 694 - 804
Target Start/End: Original strand, 8539673 - 8539783
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| ||||||||| |||||||   ||||||  | |  |||||||||||||||||||||||||| |||||||||||| |||    
T  8539673 atgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacg 8539772  T
Q  794 ttcatcaaaat 804  Q
    | |||||||||    
T  8539773 tccatcaaaat 8539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 8541357 - 8541271
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||  |||||||    
T  8541357 taatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 12738822 - 12738736
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  | |  |||||||||||||||||||||||||| ||||||||    
T  12738822 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 12801645 - 12801559
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  | |  |||||||||||||||||||||||||| ||||||||    
T  12801645 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 30463903 - 30463989
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  30463903 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 705 - 806
Target Start/End: Complemental strand, 30468395 - 30468294
Alignment:
Q  705 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    ||||| |||||| ||||||||| |||||| || ||||||  ||    |||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  30468395 ctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaat 30468296  T
Q  805 gg 806  Q
    ||    
T  30468295 gg 30468294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 21843078 - 21842992
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||| ||||||||||||||||| | |||||| ||||||||    
T  21843078 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Complemental strand, 7269538 - 7269446
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||||||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  7269538 aatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 689 - 785
Target Start/End: Complemental strand, 28822186 - 28822090
Alignment:
Q  689 atataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||| || ||||||  |||  ||||||||||||||  |||||| |||  |||||||    
T  28822186 atataatgattaatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 696 - 787
Target Start/End: Complemental strand, 43492222 - 43492131
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttta 787  Q
    ||||||||  |||| |||||  || |||||| ||||||| ||||| || ||||  |||||||||||||||||||||||||| ||||||||||    
T  43492222 gattaataaatcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 41493847 - 41493924
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| |||||||||||| ||||||||| ||||||| ||||||||  |||   ||||||| |||||||||||||||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtc 41493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 718 - 802
Target Start/End: Complemental strand, 29621883 - 29621799
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||    
T  29621883 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 29621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 751 - 806
Target Start/End: Complemental strand, 18625077 - 18625022
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||| ||||||||||||||||| ||||||||||||  ||| |||||||||||    
T  18625077 gaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatgg 18625022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 728 - 785
Target Start/End: Complemental strand, 28813822 - 28813765
Alignment:
Q  728 aaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| |||||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  28813822 aaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 802
Target Start/End: Complemental strand, 42473709 - 42473625
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  |||  ||||| | ||||||||| |  ||||| ||||||||||||||||| |||||||    
T  42473709 ttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaa 42473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 794
Target Start/End: Complemental strand, 2854447 - 2854353
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 794  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||| ||||| ||| | |||||| |||||||||||||||||    
T  2854447 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgt 2854353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 718 - 785
Target Start/End: Original strand, 29620160 - 29620227
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||||||||||||    
T  29620160 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 2852889 - 2852975
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||  ||||||||    
T  2852889 taatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 6e-30; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 31238616 - 31238509
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  31238616 taatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 31238517  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  31238516 caaaatgg 31238509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 2869582 - 2869689
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||||||||||||||| |||||||||||||| |||    
T  2869582 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccat 2869681  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  2869682 caaaatgg 2869689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 27087286 - 27087393
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| || |||||| ||||||||| ||||||| |||  |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  27087286 taatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 27087385  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  27087386 caaaatgg 27087393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 690 - 794
Target Start/End: Complemental strand, 3013606 - 3013502
Alignment:
Q  690 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 789  Q
    |||||||| ||||| ||||| |||||| ||||||||| ||| ||| | ||||||  |||| |||||||||||||||||||||||||| ||||||||||||    
T  3013606 tataatgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttaca 3013507  T
Q  790 gacgt 794  Q
    |||||    
T  3013506 gacgt 3013502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 690 - 806
Target Start/End: Complemental strand, 4856096 - 4855980
Alignment:
Q  690 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 789  Q
    |||| ||| ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  ||||||||||||||||| | |||||| ||||||||||||    
T  4856096 tatattgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttaca 4855997  T
Q  790 gacgttcatcaaaatgg 806  Q
    ||||| |||||||||||    
T  4855996 gacgtccatcaaaatgg 4855980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 37344345 - 37344452
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||| ||||||||||| ||||||||||| |||| |||    
T  37344345 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccat 37344444  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  37344445 caaaatgg 37344452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 691 - 802
Target Start/End: Complemental strand, 46583685 - 46583574
Alignment:
Q  691 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 790  Q
    ||||||| ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||  ||||||||||||||||| | |||||| |||||||||||||    
T  46583685 ataatgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacag 46583586  T
Q  791 acgttcatcaaa 802  Q
    |||| |||||||    
T  46583585 acgtccatcaaa 46583574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 50556218 - 50556111
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||  ||   |||||||||||||||||||||||||| || ||||||||||||||  ||    
T  50556218 taatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctat 50556119  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  50556118 caaaatgg 50556111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 693 - 806
Target Start/End: Complemental strand, 6818805 - 6818692
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||| |||||||||||||| |  |||  | |||| || |||||||||||||||| |||||||||||||||    
T  6818805 aatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagac 6818706  T
Q  793 gttcatcaaaatgg 806  Q
    || |||||||||||    
T  6818705 gtccatcaaaatgg 6818692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 25278489 - 25278382
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||| ||||||||||  ||||||||||| |||| |||    
T  25278489 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccat 25278390  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  25278389 caaaatgg 25278382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 34778259 - 34778152
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  ||||||||||||||||| | |||||| |||||||||||||| || |||    
T  34778259 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccat 34778160  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  34778159 caaaatgg 34778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 693 - 794
Target Start/End: Complemental strand, 25279080 - 25278979
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||| ||||||||  | |   ||||||||||||||||||||||||| |||||||||||||||    
T  25279080 aatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagac 25278981  T
Q  793 gt 794  Q
    ||    
T  25278980 gt 25278979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 751 - 806
Target Start/End: Original strand, 15104496 - 15104551
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15104496 gaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgg 15104551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 721 - 804
Target Start/End: Complemental strand, 51896251 - 51896168
Alignment:
Q  721 aatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    |||||| ||||||| | ||||||| |||  |||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  51896251 aattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaat 51896168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 2871162 - 2871076
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||  |||  ||||||||||||||| |||||| |||| |||||||    
T  2871162 taatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 31236822 - 31236908
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||| |||  |||||||||||||||||||||||||  ||||||||    
T  31236822 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 25276745 - 25276831
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  25276745 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 696 - 794
Target Start/End: Complemental strand, 33602768 - 33602670
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 794  Q
    |||||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  |||||||| |||||||| | |||||| |||||||||||||||||    
T  33602768 gattaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgt 33602670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 696 - 785
Target Start/End: Original strand, 3011855 - 3011944
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||||| ||||| |||||| || |||||| ||||||| | ||||||  | |  |||||||||||||||||||||||||||||||||||    
T  3011855 gattaatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 33599233 - 33599307
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| ||||||||| ||||||||| ||||||  |||| ||||||||||||||||| | ||| |||||||||||    
T  33599233 ttcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 37346048 - 37345962
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| |||||||| |||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  37346048 taatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 25278857 - 25278934
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| ||| || ||||||||| ||||||| | ||||||| |||  ||||||||||||||||||||||||||    
T  25278857 taatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 52641891 - 52641968
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  |||||||||||||||| |||||||||    
T  52641891 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtc 52641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 787
Target Start/End: Complemental strand, 52643737 - 52643648
Alignment:
Q  698 ttaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttta 787  Q
    |||||| ||||| |||||| || |||||||||||||| |  |||||  |||  |||||||||||||||| ||||||||| ||||||||||    
T  52643737 ttaatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 26223590 - 26223676
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  26223590 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 34776572 - 34776658
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  34776572 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 46582013 - 46582099
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46582013 taatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 772
Target Start/End: Complemental strand, 37088230 - 37088149
Alignment:
Q  691 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctattt 772  Q
    ||||||| ||||| ||||| ||| || ||||||||| ||||||||||||||||  | |  ||||||||||||||| ||||||    
T  37088230 ataatgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattt 37088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 785
Target Start/End: Original strand, 51894567 - 51894656
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||  |||| |||||  ||||||||| |||||| || ||||||| ||   |||||||||||||||| ||||||||| ||||||||    
T  51894567 gattaatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 699 - 783
Target Start/End: Original strand, 8167945 - 8168029
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaat 783  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  ||   ||||||||||||||||| | |||||| ||||||    
T  8167945 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 802
Target Start/End: Complemental strand, 9121770 - 9121686
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  |||   |||||| ||||||||| | |||||| ||||||||| ||||||| |||||||    
T  9121770 ttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 9121686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 8169654 - 8169568
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| | ||||||| | |||||| ||||||||    
T  8169654 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 18184057 - 18183960
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| ||||||||||||||||||    ||||||||| | ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| ||||||||    
T  18184057 tcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 18183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 8609928 - 8609821
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||  ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  8609928 taatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 8609829  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  8609828 caaaatgg 8609821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 13282481 - 13282588
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  13282481 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 13282580  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  13282581 caaaatgg 13282588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 695 - 806
Target Start/End: Complemental strand, 26242459 - 26242348
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 794  Q
    ||||||||| ||||| |||||  ||||||||| ||||||| ||||||||  |||   |||||||||||||||||||||||||||||||||||||||||||    
T  26242459 tgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgt 26242360  T
Q  795 tcatcaaaatgg 806  Q
     |||||||||||    
T  26242359 ccatcaaaatgg 26242348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 694 - 806
Target Start/End: Original strand, 38547226 - 38547338
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| ||||| |||||| ||||||||| |||||||||||||||   |||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  38547226 atgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacg 38547325  T
Q  794 ttcatcaaaatgg 806  Q
    | |||||||||||    
T  38547326 tccatcaaaatgg 38547338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 7745253 - 7745146
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||  ||   |||||||||||||||| ||||||||| ||| ||||||||||| | |||    
T  7745253 taatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatccat 7745154  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  7745153 caaaatgg 7745146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 695 - 806
Target Start/End: Complemental strand, 41825789 - 41825678
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 794  Q
    ||||||||| ||||| |||||| ||||||||| |||||||    |||||  |||  |||||||||||||||||||||||||| |||||||||||||||||    
T  41825789 tgattaatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 41825690  T
Q  795 tcatcaaaatgg 806  Q
     |||||||||||    
T  41825689 ccatcaaaatgg 41825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 713 - 806
Target Start/End: Complemental strand, 41042711 - 41042618
Alignment:
Q  713 cgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||| ||||||||| |||||| |||||||||| |||  |||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  41042711 cgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatgg 41042618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 699 - 806
Target Start/End: Complemental strand, 13108477 - 13108370
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| |||||||||| ||||   |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  13108477 taataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 13108378  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  13108377 caaaatgg 13108370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 699 - 802
Target Start/End: Original strand, 27691157 - 27691260
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  27691157 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 27691256  T
Q  799 caaa 802  Q
    ||||    
T  27691257 caaa 27691260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 697 - 804
Target Start/End: Original strand, 42941775 - 42941882
Alignment:
Q  697 attaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 796  Q
    ||||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  |||||||| ||||||| ||||||||| |||||||||||||| || |    
T  42941775 attaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtcc 42941874  T
Q  797 atcaaaat 804  Q
    ||||||||    
T  42941875 atcaaaat 42941882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 42943512 - 42943426
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  42943512 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 718 - 806
Target Start/End: Complemental strand, 13486221 - 13486133
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||||||||||||||| || |||  ||   | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  13486221 ttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgg 13486133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 699 - 776
Target Start/End: Complemental strand, 34681152 - 34681075
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||    
T  34681152 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 34681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 699 - 804
Target Start/End: Original strand, 22272337 - 22272444
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaa--tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 796  Q
    ||||| ||||| |||||||||||||||| |||||  || | ||||||  |||  |||||||||| ||||||||||||||| |||||||||||| |||| |    
T  22272337 taatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtcc 22272436  T
Q  797 atcaaaat 804  Q
    ||||||||    
T  22272437 atcaaaat 22272444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 5036448 - 5036555
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| || |||||| ||||||| | ||||||  |||  |||||||| |||||||||||||||||  ||||||||||||||||  ||    
T  5036448 taatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctat 5036547  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  5036548 caaaatgg 5036555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 22273977 - 22273891
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||| ||   ||||||||| |||||||||||||||| ||||||||    
T  22273977 taatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 26238729 - 26238806
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  ||||||||||||||||||||||||||    
T  26238729 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtc 26238806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 785
Target Start/End: Original strand, 33761066 - 33761158
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||||||||||||| ||||||| ||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  33761066 aatgactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 751 - 806
Target Start/End: Complemental strand, 9673254 - 9673199
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||| |||||||||||||| || ||||||||||||||||| |||||||||||    
T  9673254 gaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatgg 9673199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 13106819 - 13106893
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  13106819 ttcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 695 - 785
Target Start/End: Complemental strand, 13284085 - 13283995
Alignment:
Q  695 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||| | ||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | ||||||  |||||||    
T  13284085 tgattaataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 693 - 785
Target Start/End: Complemental strand, 33762805 - 33762713
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  33762805 aatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 694 - 785
Target Start/End: Complemental strand, 38548922 - 38548831
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | ||| || ||||||||    
T  38548922 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 601790 - 601704
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  601790 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 5038147 - 5038062
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||||| ||||||| ||||||||| ||||||  | |  ||||||||||||||| |||||||||| ||||||||    
T  5038147 taatacctcaaattcgtctt-gaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 27692923 - 27692837
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||| ||||||| | |||||| ||||||||    
T  27692923 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 764
Target Start/End: Original strand, 13484554 - 13484613
Alignment:
Q  705 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaat 764  Q
    ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||    
T  13484554 ctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 751 - 806
Target Start/End: Complemental strand, 40339769 - 40339714
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||| || |||||||||||||||||  ||||||||||||| || |||||||||||    
T  40339769 gaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatgg 40339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 29239273 - 29239187
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||   |||||| ||||||||| | |||||| ||||||||    
T  29239273 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 35509217 - 35509303
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35509217 taatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 706 - 803
Target Start/End: Complemental strand, 462484 - 462387
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 803  Q
    |||| |||||| ||||||||||| | |||||||||||| ||||   |||| ||||||||||| | ||||||  |||||||  || |||| ||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaa 462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 743
Target Start/End: Original strand, 41040718 - 41040767
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatt 743  Q
    |||| ||||| ||||| || |||||||||||||||||||||||| |||||    
T  41040718 atgactaatacctcaaatttgtctttgaatttttaaaaatcggctaaatt 41040767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 41823905 - 41823970
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    |||||| ||||||||| ||||||| || || ||  |||  ||||||||||||||||||||||||||    
T  41823905 ttcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtc 41823970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 693 - 806
Target Start/End: Complemental strand, 32439218 - 32439105
Alignment:
Q  693 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 792  Q
    ||||| ||||| ||||| || ||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  32439218 aatgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 32439119  T
Q  793 gttcatcaaaatgg 806  Q
    || |||||||||||    
T  32439118 gtccatcaaaatgg 32439105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 720 - 806
Target Start/End: Original strand, 20523390 - 20523476
Alignment:
Q  720 gaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    ||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  20523390 gaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgg 20523476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 697 - 806
Target Start/End: Complemental strand, 7373081 - 7372972
Alignment:
Q  697 attaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 796  Q
    ||||||| ||||| |||||  |||||||||||||||| || ||||||  |||  |||||||||||||||| ||||||||| ||||||||||||| ||| |    
T  7373081 attaatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtcc 7372982  T
Q  797 atcaaaatgg 806  Q
    ||||||||||    
T  7372981 atcaaaatgg 7372972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 694 - 802
Target Start/End: Complemental strand, 13613708 - 13613600
Alignment:
Q  694 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 793  Q
    |||| ||||| || || |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||| | |||||| ||||||||||||||||    
T  13613708 atgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 13613609  T
Q  794 ttcatcaaa 802  Q
    | |||||||    
T  13613608 tccatcaaa 13613600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 751 - 806
Target Start/End: Original strand, 9398715 - 9398770
Alignment:
Q  751 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9398715 gaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatgg 9398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 707 - 806
Target Start/End: Complemental strand, 14338588 - 14338489
Alignment:
Q  707 caacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 806  Q
    |||||||||| ||||||||||||||||| ||||||||  |||   ||||||||||||| |||| ||  || |||||||| |||||||| |||||||||||    
T  14338588 caacttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatgg 14338489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 706 - 804
Target Start/End: Original strand, 10568409 - 10568507
Alignment:
Q  706 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 804  Q
    |||| |||||| ||||||||| ||||||| | ||||||  |||  |||||| ||||||||| ||||||||| |||||||||||||||||  ||||||||    
T  10568409 tcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaat 10568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 32518583 - 32518497
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  32518583 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 699 - 776
Target Start/End: Complemental strand, 10570005 - 10569928
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||| ||||||||| ||||||||||||||||    
T  10570005 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtc 10569928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 690 - 806
Target Start/End: Original strand, 6899479 - 6899595
Alignment:
Q  690 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 789  Q
    |||||||| ||||| ||||| || ||| ||||||||| ||||||| | ||||||  ||    ||||||| ||||||||||||||||| || |||||||||    
T  6899479 tataatgactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttaca 6899578  T
Q  790 gacgttcatcaaaatgg 806  Q
    ||| | |||||||||||    
T  6899579 gacatccatcaaaatgg 6899595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 765
Target Start/End: Original strand, 7371178 - 7371244
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaata 765  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||    
T  7371178 taatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 9400121 - 9400035
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| ||||||| | |||||| ||||  ||||||||||||||||||| |||||| | ||||||    
T  9400121 taatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 20525420 - 20525334
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||| ||||  ||||||||| ||||| |||||| |||  |||||||    
T  20525420 taatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 699 - 804
Target Start/End: Original strand, 32516880 - 32516985
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||| | ||||| |||||||| |  ||||||||||| |||| |||    
T  32516880 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtccat 32516979  T
Q  799 caaaat 804  Q
    ||||||    
T  32516980 caaaat 32516985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 718 - 802
Target Start/End: Original strand, 3456770 - 3456854
Alignment:
Q  718 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 802  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||    
T  3456770 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaa 3456854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 699 - 806
Target Start/End: Original strand, 11355225 - 11355332
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  ||   |||||||  |||||||||||| | || ||||||||||||||||  ||     
T  11355225 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccac 11355324  T
Q  799 caaaatgg 806  Q
    ||||||||    
T  11355325 caaaatgg 11355332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 785
Target Start/End: Original strand, 32454240 - 32454337
Alignment:
Q  688 tatataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    |||||||||| ||||| |||||  | ||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  32454240 tatataatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 13610705 - 13610770
Alignment:
Q  711 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    |||||| ||||||||| ||||||||  ||||||| |||  ||||||||||||||||| | ||||||    
T  13610705 ttcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtc 13610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 699 - 776
Target Start/End: Original strand, 21068628 - 21068705
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 776  Q
    ||||| ||||| |||||| ||||||||| || |||| | ||||||  ||||  |||||| ||||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtc 21068705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 56; Significance: 9e-23; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 802
Target Start/End: Original strand, 3297 - 3400
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  3297 taatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 3396  T
Q  799 caaa 802  Q
    ||||    
T  3397 caaa 3400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 699 - 802
Target Start/End: Original strand, 4469 - 4572
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 798  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  4469 taatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 4568  T
Q  799 caaa 802  Q
    ||||    
T  4569 caaa 4572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 785
Target Start/End: Complemental strand, 14429 - 14343
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||| ||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  14429 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 696 - 806
Target Start/End: Original strand, 1263 - 1373
Alignment:
Q  696 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 795  Q
    |||||||| ||||| | |||| ||||||||| |||||| ||  |||||  |||| |||||||  ||||||||||||||||| |||||||||||||||||     
T  1263 gattaatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtc 1362  T
Q  796 catcaaaatgg 806  Q
    |||||||||||    
T  1363 catcaaaatgg 1373  T

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Target: scaffold0564 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 699 - 787
Target Start/End: Original strand, 8265 - 8353
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttta 787  Q
    ||||| ||||| |||||| ||||||||| |||||| |||||||||  | |  ||||||||| |||||||||||||||| ||||||||||    
T  8265 taatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 699 - 785
Target Start/End: Original strand, 106673 - 106757
Alignment:
Q  699 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 785  Q
    ||||||||||| |||||| ||||||||  |  |||| ||||||||| |||| ||||||| ||||||||||||||||| || ||||||    
T  106673 taatatctcaaattcgtccttgaattt--accaatcagccaaatttgtccatgaattttacgaaatatctatttagtttccgaattt 106757  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 705 - 772
Target Start/End: Original strand, 436274 - 436341
Alignment:
Q  705 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctattt 772  Q
    ||||| |||||  ||||||||| ||||||| |||||||| |||||  |||||||||||||||||||||    
T  436274 ctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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