View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1384_low_2 (Length: 509)

Name: NF1384_low_2
Description: NF1384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1384_low_2
NF1384_low_2
[»] chr8 (25 HSPs)
chr8 (3-301)||(2364248-2364550)
chr8 (298-480)||(2364630-2364812)
chr8 (149-210)||(24326106-24326167)
chr8 (140-196)||(37353097-37353153)
chr8 (347-426)||(2368405-2368484)
chr8 (146-209)||(2487939-2488002)
chr8 (241-300)||(4055613-4055672)
chr8 (157-204)||(8535997-8536044)
chr8 (150-197)||(25881350-25881397)
chr8 (146-207)||(11376781-11376842)
chr8 (144-196)||(4560591-4560643)
chr8 (144-191)||(3634613-3634660)
chr8 (229-300)||(8062343-8062414)
chr8 (147-210)||(26499791-26499854)
chr8 (146-209)||(34849180-34849243)
chr8 (149-191)||(21130706-21130748)
chr8 (144-209)||(778465-778530)
chr8 (144-209)||(43368629-43368694)
chr8 (144-204)||(1664450-1664510)
chr8 (146-210)||(30251385-30251448)
chr8 (144-192)||(38602421-38602468)
chr8 (146-210)||(38648427-38648490)
chr8 (139-207)||(39881645-39881713)
chr8 (144-196)||(43385729-43385781)
chr8 (146-210)||(43717865-43717928)
[»] chr4 (27 HSPs)
chr4 (148-209)||(18628486-18628547)
chr4 (144-209)||(33534098-33534163)
chr4 (144-196)||(1017117-1017169)
chr4 (252-300)||(11158365-11158413)
chr4 (146-197)||(21157856-21157907)
chr4 (147-194)||(50298606-50298653)
chr4 (148-209)||(8328052-8328113)
chr4 (158-210)||(22471349-22471401)
chr4 (147-191)||(22523774-22523818)
chr4 (232-300)||(23819103-23819171)
chr4 (144-196)||(27043759-27043810)
chr4 (241-300)||(11264315-11264374)
chr4 (144-207)||(15173232-15173294)
chr4 (146-209)||(25717669-25717732)
chr4 (157-207)||(25497634-25497684)
chr4 (144-210)||(25904152-25904217)
chr4 (147-189)||(47970392-47970434)
chr4 (144-209)||(6428094-6428159)
chr4 (145-186)||(18512445-18512486)
chr4 (234-302)||(19304938-19305006)
chr4 (140-196)||(19429798-19429854)
chr4 (146-186)||(22845637-22845676)
chr4 (229-289)||(24929518-24929578)
chr4 (145-209)||(27123282-27123346)
chr4 (228-300)||(30066750-30066822)
chr4 (241-301)||(32769629-32769689)
chr4 (144-204)||(35743350-35743410)
[»] chr2 (39 HSPs)
chr2 (137-210)||(26548528-26548601)
chr2 (146-210)||(42852633-42852697)
chr2 (143-197)||(14277821-14277875)
chr2 (144-209)||(22878174-22878239)
chr2 (146-210)||(40943988-40944052)
chr2 (146-209)||(25609872-25609935)
chr2 (229-300)||(43065435-43065506)
chr2 (148-210)||(17443541-17443603)
chr2 (234-300)||(35993370-35993436)
chr2 (145-210)||(5759505-5759570)
chr2 (241-298)||(5781685-5781742)
chr2 (229-301)||(1647249-1647321)
chr2 (147-191)||(15200265-15200309)
chr2 (144-192)||(15370252-15370300)
chr2 (147-207)||(29430836-29430896)
chr2 (146-210)||(40158793-40158857)
chr2 (229-300)||(680517-680588)
chr2 (137-192)||(5752427-5752482)
chr2 (146-197)||(7035341-7035392)
chr2 (144-207)||(30331830-30331892)
chr2 (229-300)||(33192216-33192287)
chr2 (241-300)||(34652033-34652092)
chr2 (229-271)||(787375-787417)
chr2 (229-271)||(1494431-1494473)
chr2 (229-271)||(5902534-5902576)
chr2 (144-202)||(9996821-9996879)
chr2 (140-210)||(10567132-10567202)
chr2 (144-210)||(42419869-42419934)
chr2 (144-209)||(9478375-9478440)
chr2 (169-210)||(32837398-32837439)
chr2 (147-192)||(38787833-38787878)
chr2 (231-300)||(44438826-44438895)
chr2 (144-209)||(44458085-44458150)
chr2 (149-209)||(1318312-1318371)
chr2 (144-184)||(26372656-26372696)
chr2 (146-210)||(33192277-33192340)
chr2 (140-192)||(37276837-37276889)
chr2 (146-186)||(40759259-40759299)
chr2 (165-209)||(44606060-44606104)
[»] chr3 (29 HSPs)
chr3 (146-210)||(22667478-22667542)
chr3 (146-210)||(22724117-22724181)
chr3 (145-207)||(21872225-21872287)
chr3 (147-209)||(26330255-26330317)
chr3 (147-210)||(18405763-18405825)
chr3 (146-209)||(24158447-24158510)
chr3 (229-271)||(24624253-24624295)
chr3 (130-210)||(20194947-20195028)
chr3 (132-191)||(1395733-1395793)
chr3 (144-196)||(2923567-2923619)
chr3 (137-209)||(20267599-20267671)
chr3 (146-210)||(24624285-24624349)
chr3 (147-203)||(25129960-25130016)
chr3 (232-300)||(50952347-50952415)
chr3 (230-300)||(6483815-6483885)
chr3 (147-197)||(30657374-30657424)
chr3 (118-195)||(37795686-37795763)
chr3 (147-193)||(41033188-41033234)
chr3 (144-197)||(26542625-26542677)
chr3 (146-207)||(28283530-28283591)
chr3 (223-300)||(30923877-30923954)
chr3 (147-191)||(20210860-20210904)
chr3 (144-196)||(25447174-25447225)
chr3 (146-190)||(27795944-27795988)
chr3 (147-191)||(41724306-41724350)
chr3 (144-204)||(45590732-45590792)
chr3 (147-191)||(49605783-49605827)
chr3 (145-209)||(50211811-50211875)
chr3 (144-208)||(51130827-51130891)
[»] chr7 (22 HSPs)
chr7 (144-209)||(4970721-4970785)
chr7 (147-192)||(8427106-8427151)
chr7 (144-209)||(34950080-34950145)
chr7 (146-210)||(33894702-33894766)
chr7 (145-204)||(24048621-24048680)
chr7 (144-210)||(31002810-31002876)
chr7 (137-206)||(2825158-2825227)
chr7 (144-205)||(14823798-14823859)
chr7 (144-205)||(15270805-15270866)
chr7 (144-209)||(44151405-44151470)
chr7 (241-301)||(39539778-39539838)
chr7 (229-300)||(9423579-9423650)
chr7 (145-208)||(28727693-28727756)
chr7 (144-207)||(34035996-34036058)
chr7 (229-271)||(12834947-12834989)
chr7 (144-210)||(19302492-19302557)
chr7 (146-207)||(3836614-3836675)
chr7 (229-294)||(25670571-25670636)
chr7 (145-190)||(25907567-25907612)
chr7 (146-210)||(8094381-8094445)
chr7 (146-190)||(29363603-29363647)
chr7 (137-189)||(47007069-47007121)
[»] chr1 (35 HSPs)
chr1 (140-192)||(33204319-33204370)
chr1 (146-210)||(41638239-41638303)
chr1 (146-197)||(15581342-15581393)
chr1 (146-196)||(21002244-21002294)
chr1 (148-210)||(32515374-32515436)
chr1 (137-190)||(28837275-28837328)
chr1 (144-209)||(46504147-46504212)
chr1 (146-210)||(2295172-2295235)
chr1 (144-192)||(6292585-6292633)
chr1 (234-302)||(27140490-27140558)
chr1 (145-204)||(4276580-4276639)
chr1 (146-209)||(18327077-18327140)
chr1 (144-191)||(24460330-24460377)
chr1 (234-301)||(28689442-28689509)
chr1 (146-209)||(31517671-31517734)
chr1 (124-209)||(4757414-4757500)
chr1 (230-300)||(10199394-10199464)
chr1 (144-186)||(29793627-29793669)
chr1 (147-209)||(36070257-36070319)
chr1 (144-197)||(3597210-3597263)
chr1 (143-192)||(11217942-11217991)
chr1 (144-197)||(12564428-12564481)
chr1 (144-209)||(17009511-17009576)
chr1 (298-331)||(49365945-49365978)
chr1 (144-209)||(50644184-50644248)
chr1 (144-196)||(4622182-4622234)
chr1 (144-192)||(10199337-10199385)
chr1 (229-289)||(11639401-11639461)
chr1 (140-192)||(15784411-15784462)
chr1 (144-204)||(15819202-15819262)
chr1 (297-329)||(17423077-17423109)
chr1 (152-196)||(28836982-28837026)
chr1 (298-330)||(29415866-29415898)
chr1 (241-297)||(35080066-35080122)
chr1 (146-210)||(38001671-38001734)
[»] chr5 (26 HSPs)
chr5 (144-191)||(37968971-37969018)
chr5 (149-207)||(14714777-14714835)
chr5 (144-210)||(38033956-38034022)
chr5 (152-197)||(13781812-13781857)
chr5 (144-205)||(17498791-17498852)
chr5 (146-209)||(10391418-10391481)
chr5 (144-210)||(499660-499726)
chr5 (144-190)||(10791089-10791135)
chr5 (175-209)||(10907454-10907488)
chr5 (144-194)||(36796636-36796686)
chr5 (147-209)||(37611147-37611209)
chr5 (147-209)||(37787877-37787939)
chr5 (234-300)||(40205064-40205130)
chr5 (132-209)||(2103179-2103256)
chr5 (146-191)||(10771819-10771864)
chr5 (144-209)||(11457174-11457239)
chr5 (144-209)||(12459930-12459995)
chr5 (146-207)||(15015922-15015982)
chr5 (146-210)||(2568733-2568797)
chr5 (145-189)||(6749429-6749473)
chr5 (147-191)||(7550450-7550494)
chr5 (144-192)||(12425667-12425714)
chr5 (146-210)||(16937814-16937877)
chr5 (239-287)||(19138712-19138760)
chr5 (241-297)||(28586763-28586819)
chr5 (260-300)||(38104873-38104913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (234-300)||(159963-160029)
[»] chr6 (27 HSPs)
chr6 (234-300)||(34939758-34939824)
chr6 (153-210)||(2732185-2732242)
chr6 (153-202)||(32976061-32976110)
chr6 (235-300)||(33067172-33067237)
chr6 (149-210)||(33385604-33385665)
chr6 (233-302)||(34538207-34538276)
chr6 (149-209)||(2455689-2455749)
chr6 (145-209)||(26559169-26559233)
chr6 (149-204)||(27894114-27894169)
chr6 (229-276)||(34544129-34544176)
chr6 (229-295)||(1669783-1669849)
chr6 (241-299)||(4420658-4420716)
chr6 (144-190)||(7351600-7351646)
chr6 (147-209)||(27857434-27857496)
chr6 (144-210)||(29249468-29249534)
chr6 (144-186)||(33089605-33089647)
chr6 (146-192)||(35070398-35070444)
chr6 (144-197)||(281777-281830)
chr6 (144-209)||(2455886-2455951)
chr6 (144-197)||(3180998-3181051)
chr6 (146-207)||(5551528-5551589)
chr6 (157-206)||(10031811-10031860)
chr6 (135-209)||(30533865-30533941)
chr6 (146-207)||(31774455-31774516)
chr6 (145-209)||(2460081-2460145)
chr6 (297-333)||(7480269-7480305)
chr6 (147-207)||(31461750-31461810)
[»] scaffold0159 (1 HSPs)
scaffold0159 (241-298)||(27017-27074)
[»] scaffold0590 (1 HSPs)
scaffold0590 (128-210)||(989-1072)
[»] scaffold0275 (1 HSPs)
scaffold0275 (128-210)||(2903-2986)
[»] scaffold0141 (1 HSPs)
scaffold0141 (147-197)||(9710-9760)
[»] scaffold0147 (1 HSPs)
scaffold0147 (241-298)||(12701-12758)
[»] scaffold0024 (1 HSPs)
scaffold0024 (150-203)||(27658-27711)
[»] scaffold0508 (1 HSPs)
scaffold0508 (229-257)||(9784-9812)
[»] scaffold0428 (1 HSPs)
scaffold0428 (148-208)||(3983-4043)
[»] scaffold0199 (1 HSPs)
scaffold0199 (144-204)||(6891-6951)


Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 3 - 301
Target Start/End: Original strand, 2364248 - 2364550
Alignment:
Q  3 tgcatgaagaaataggaatttgaataatattttgtttggttctgtattcaatctgttttactactatgtatgagtaaatggttcctttatgtcttaaagt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364248 tgcatgaagaaataggaatttgaataatattttgtttggttctgtattcaatctgttttactactatgtatgagtaaatggttcctttatgtcttaaagt 2364347  T
Q  103 tgataatttggatggattggtaatatagagtctatttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattat 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2364348 tgataatttggatggattggtaatatagagtctatttgatcgacttatttgaacttatcttctgacataagtacttgtgagactgtttggaagagattat 2364447  T
Q  203 gaaaacag----nnnnnnnnnnnngagagatatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctt 298  Q
    ||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364448 gaaaacagttttttttttttttttgagagatatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctt 2364547  T
Q  299 ata 301  Q
    |||    
T  2364548 ata 2364550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 298 - 480
Target Start/End: Original strand, 2364630 - 2364812
Alignment:
Q  298 tataagcgcttaactatgttgtttatccaaacagggataatatgtatctgatgtatttatatttttgcaaattttaaattgtcctagactgaatcaagat 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364630 tataagcgcttaactatgttgtttatccaaacagggataatatgtatctgatgtatttatatttttgcaaattttaaattgtcctagactgaatcaagat 2364729  T
Q  398 gaactatggtagaaacaagtatgatcaaggaggctattatccaccagctggatcctattcctatccacctcaaggatgctatc 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2364730 gaactatggtagaaacaagtatgatcaaggaggctattatccaccagctggatcctattcctatccacctcaaggatgctatc 2364812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 24326167 - 24326106
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||||| ||| |||||| |||||||||||||||||| |||| ||||| ||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacag 24326106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 37353097 - 37353153
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||||||| ||| | ||||| |||||||||| ||||||||||||||||||||||    
T  37353097 gatcgacttatctgaacctatctactgacataagcacttgtgagactgtttggaaga 37353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 2368405 - 2368484
Alignment:
Q  347 gatgtatttatatttttgcaaattttaaattgtcctagactgaatcaagatgaactatggtagaaacaagtatgatcaag 426  Q
    |||||| |||||||||||| ||||| ||| |||  |||  |||||||| |||||| |||||||||||||| |||||||||    
T  2368405 gatgtacttatatttttgccaatttgaaactgttttagggtgaatcaacatgaacaatggtagaaacaagcatgatcaag 2368484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 2487939 - 2488002
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||| | |||| |||||||||| |||||||||||||||||| |||  |||||||||||    
T  2487939 cttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 2488002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 4055613 - 4055672
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||||||||| |||||||||||| ||||   ||||||||| |||||||||||    
T  4055613 ttatgacatgtccataaactgttttcagcttatttccttaagctctctgagatagcttat 4055672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 8535997 - 8536044
Alignment:
Q  157 ttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  8535997 ttatctactgacataagtacttgtgagactgtttgggagagtttatga 8536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 25881350 - 25881397
Alignment:
Q  150 tttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||    
T  25881350 tttgagtttatctactgacataagtacttgtgagactgtttgaaagag 25881397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 11376842 - 11376781
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||| |||  |||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaa 11376781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 4560643 - 4560591
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    |||||||||||||||||||  ||||||||| |||||||||  |||||||||||    
T  4560643 gacttatttgagcttatctattgacataagcacttgtgaggttgtttggaaga 4560591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 3634613 - 3634660
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||||||||||||| |||||||| | |||||| ||||||||||    
T  3634613 gacttatttgagcttatctgctgacatatgcacttgtaagactgtttg 3634660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 8062414 - 8062343
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||| ||||||||||  || |||||||||  |||||||||||| |||| | || ||||||||||||||||||    
T  8062414 tatggaaacagtttacaacgtgtccataagatgttttcagcttatttccataatctctctaagatagcttat 8062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 26499854 - 26499791
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||  |||||| |||||||||| |||||||||||| ||| | |||| ||||||||||||    
T  26499854 ttatttgaatttatctactgacataagcacttgtgagactattttgtagaggttatgaaaacag 26499791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 34849243 - 34849180
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||||| || ||| ||||||||||| ||||||||||||| |||  | |||||||||    
T  34849243 cttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaaca 34849180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 21130748 - 21130706
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    |||||||||||| | ||||||||| ||||||||||||||||||    
T  21130748 atttgagcttatgtgctgacataaatacttgtgagactgtttg 21130706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 778530 - 778465
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||  ||||| | |||| ||||| ||||||||||||||||| ||||  |||||||||||    
T  778530 gacttatttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaaca 778465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 43368629 - 43368694
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||| ||||||| || ||||||| | ||||||||||| ||| || || |||||||||||    
T  43368629 gacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaaca 43368694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1664510 - 1664450
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    |||||||||||| |||||| ||  |||||  |||||||||||||||||| |||| ||||||    
T  1664510 gacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 30251385 - 30251448
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| |||||||||||  | |||||||||||||| |||  ||| ||||||||    
T  30251385 cttatttgagcttatctactgacataagt-ttcgtgagactgtttgggagaacttacgaaaacag 30251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 38602468 - 38602421
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  38602468 gacttatttgagcttatctactgacataagt-tttgtgaggctgtttgg 38602421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 38648490 - 38648427
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||| || |||||| |||||||||||  |||||||||||||||| |||  ||||||||||||    
T  38648490 cttatttaagattatctactgacataagtt-ttgtgagactgtttgggagaccttatgaaaacag 38648427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 39881645 - 39881713
Alignment:
Q  139 tgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||| ||||||||||| |||||||  || |||||  |||||||||| |||||||||||| || ||||||    
T  39881645 tgattgacttatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaa 39881713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 43385781 - 43385729
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||| | ||||||||| ||| |||||| || |||||||||||||||||||    
T  43385781 gacttatctaagcttatctactggcataagcacctgtgagactgtttggaaga 43385729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 43717865 - 43717928
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||||||||  ||||||||||  |||||||||| ||||| |||  ||||||||||||    
T  43717865 cttatttgagcttatctattgacataagt-tttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 18628486 - 18628547
Alignment:
Q  148 tatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||| |||||||||  |||||||||||||||||| |||| |||||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaaca 18628547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 33534098 - 33534163
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||||||||||  |||||||||||||||||||| | ||||  |||| |||||||||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaaca 33534163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 1017169 - 1017117
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    |||||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  1017169 gacttatttgagctaatctactgacataaacacttgtgagactgtttggaaga 1017117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 11158365 - 11158413
Alignment:
Q  252 ccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  11158365 ccataaactgttttcagcttatttccacaagctctctaagatagcttat 11158413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 21157907 - 21157856
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||||||||| |||| |||||||||| |||||| ||||||||||||||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagag 21157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 50298653 - 50298606
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaa 194  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttggaa 50298606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 8328052 - 8328113
Alignment:
Q  148 tatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||||||  || |||||| |||| ||||||||||||||| || |||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaaca 8328113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 22471401 - 22471349
Alignment:
Q  158 tatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||| |||||||||| |||||||||||||||||| |||  ||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacag 22471349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 22523818 - 22523774
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||||    
T  22523818 ttattcgagtttatctactgacataagtacttgtgagactgtttg 22523774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 23819171 - 23819103
Alignment:
Q  232 gaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||| |||||||||||||||||  |||||||| ||| |||| | |||||||  ||||||||||||    
T  23819171 gaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttat 23819103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 27043759 - 27043810
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||||||||||||||| |||||||||||  |||||| |||||||||||||    
T  27043759 gacttatttgagcttatctactgacataagt-tttgtgaaactgtttggaaga 27043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 11264374 - 11264315
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||||||||| |||||||| ||| |||| | |||||||||| ||| ||||||    
T  11264374 ttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttat 11264315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 15173232 - 15173294
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||| |||  |||||||||    
T  15173232 gacttatttgaacttatctactgacataagt-tttgtgagactgtttgggagactttatgaaaa 15173294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 25717732 - 25717669
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||| | | |||||||| |||||||| | |||||||||||| ||||| |||||    
T  25717732 cttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaaca 25717669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 25497684 - 25497634
Alignment:
Q  157 ttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||||| |||||||||||||||||||||| |||||| | || |||||||||    
T  25497684 ttatctactgacataagtacttgtgagacagtttggtaaagcttatgaaaa 25497634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 25904152 - 25904217
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||||   |||||||| |  |||||||||||||||| |||| ||||||||||||    
T  25904152 gacttatttgagcttatccaatgacataaatt-ttgtgagactgtttgggagagcttatgaaaacag 25904217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 47970434 - 47970392
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtt 189  Q
    |||||||||||||||| |||||||||| |||||||| ||||||    
T  47970434 ttatttgagcttatctactgacataagcacttgtgaaactgtt 47970392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 6428159 - 6428094
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||| |  ||  ||||| ||||||||||| |||||  ||||||||||||||||    
T  6428159 gacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaaca 6428094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 18512445 - 18512486
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagact 186  Q
    |||||||||||||||||| |||||||||  ||||||||||||    
T  18512445 acttatttgagcttatctactgacataaacacttgtgagact 18512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 19305006 - 19304938
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttataa 302  Q
    |||||| |||||||||||||||||  |||||||||||| |||| |  | ||||| || |||||||||||    
T  19305006 aaacagcttatgacatgtccataagttgttttcagcttgtttccattaactctccaaaatagcttataa 19304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 19429854 - 19429798
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||||||||||| ||||||| ||  |||||| || ||||||| |||||||||||    
T  19429854 gatcgacttatttgaacttatctactcgcataagcacatgtgagattgtttggaaga 19429798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 22845637 - 22845676
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagact 186  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  22845637 cttatttgagcttatctact-acataagtacttgtgagact 22845676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 24929578 - 24929518
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctcta 289  Q
    |||| |||||| ||||| ||||| |||||| |||||||||||| |||| | ||||||||||    
T  24929578 tatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctcta 24929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 27123282 - 27123346
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||   ||  ||||||||||||||||||||||||  |||| ||||| |||||    
T  27123282 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaaca 27123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 30066750 - 30066822
Alignment:
Q  228 atatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||| |||| | |||| |||||  |||||||||||| |||  | |||||||| ||||||||||||    
T  30066750 atatgaaaacagcttataatatgttcataatctgttttcagcttgtttttataagctctccaagatagcttat 30066822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 32769629 - 32769689
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttata 301  Q
    |||| ||||||||||||| |||||||| ||| ||||| |||||||||   |||||||||||    
T  32769629 ttataacatgtccataaactgttttcaccttatttcgtcaagctctccgggatagcttata 32769689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 35743410 - 35743350
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    |||||||||||| |||||| || | ||||| | |||||||||||||| |||||| ||||||    
T  35743410 gacttatttgagattatctactaatataagcatttgtgagactgtttagaagagcttatga 35743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 26548601 - 26548528
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||| | ||||||||||||||||| | |||||||||| |||||||||| |||||||| | ||||||||||||    
T  26548601 tttgattggcttatttgagcttatctaccgacataagtatttgtgagactatttggaagggcttatgaaaacag 26548528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 42852633 - 42852697
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||  |||||||||||    
T  42852633 cttatttgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaaacag 42852697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 14277821 - 14277875
Alignment:
Q  143 cgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||    
T  14277821 cgacttatttgagtttatctacggacataagtacttgtgagagtgtttggaagag 14277875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 22878239 - 22878174
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||| |||  ||||| |||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaaca 22878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 40944052 - 40943988
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||| ||||||  ||||||||| |||||||| ||||||||||| || ||||||||||||    
T  40944052 cttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacag 40943988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 25609935 - 25609872
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||| || ||||||| ||||||||||||| |||||| || ||||| |||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaaca 25609872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 43065435 - 43065506
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||||  |||||||||||||||||| |||||||||||| |||| | |||||||| | |||| |||||    
T  43065435 tatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttat 43065506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 17443541 - 17443603
Alignment:
Q  148 tatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||| ||||| | |||| ||||| ||||||||||||||||||||||| ||||| ||||||    
T  17443541 tatttgaacttatatactgatataagcacttgtgagactgtttggaagagtttatggaaacag 17443603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 35993370 - 35993436
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||||| |||||||||| |||||||||||| |||  | ||| |||||| ||||||||||    
T  35993370 aaacagtttatgacgtgtccataaattgttttcagcttattttcataagttctctatgatagcttat 35993436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 5759505 - 5759570
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||| ||||||  ||  |||||||||||||||||||||||| |||| ||||| ||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacag 5759570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 5781742 - 5781685
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctt 298  Q
    ||||||||||| |||||| |||||||||||| |||| | |||||||||| ||||||||    
T  5781742 ttatgacatgtgcataaactgttttcagcttatttccataagctctctatgatagctt 5781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 1647321 - 1647249
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttata 301  Q
    ||||||||||| ||||||||||  |||||  |||||||||||| |||| | ||||||||||  ||||||||||    
T  1647321 tatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttata 1647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 15200265 - 15200309
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||||||||||  || ||||||||||||||||||||||||    
T  15200265 ttatttgagcttatctgttggcataagtacttgtgagactgtttg 15200309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 15370252 - 15370300
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||| ||| |||||| | ||||||||||||||||    
T  15370252 gacttatttgagcttatctactggcataagcatttgtgagactgtttgg 15370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 29430896 - 29430836
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||||||||||||||| |||||||||  ||||||| |||| |||||||||  |||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaa 29430836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 40158857 - 40158793
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||| ||||| |||||||||| ||||||||||||| ||||  ||  ||||||||||||    
T  40158857 cttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacag 40158793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 680588 - 680517
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||||| |||||||||||  ||||| |||||||||||| |||  ||||| |||  ||||||||||||    
T  680588 tatgaaaacagcttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttat 680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 5752427 - 5752482
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    |||||||||||||||| |||||||||  ||||||| | ||||| ||||||||||||    
T  5752427 tttgatcgacttatttaagcttatctgttgacatatgcacttgcgagactgtttgg 5752482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 7035341 - 7035392
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||||||||||||||  ||| |||| |||||||| |||||||||||||||    
T  7035341 cttatttgagcttatctaatgagataaatacttgtgcgactgtttggaagag 7035392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 30331892 - 30331830
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||| ||||||||| |||||||||||  |||||||||||||||| |||  |||||||||    
T  30331892 gacttatttcagcttatctactgacataagt-tttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 33192287 - 33192216
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||||||||||||||| |||||||  |||||||||||| | |  | |||||||| | ||||||||||    
T  33192287 tatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttat 33192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 34652033 - 34652092
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||||||||  |||||||| ||| |||| | |||||||| ||||||||||||    
T  34652033 ttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttat 34652092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 787417 - 787375
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagctt 271  Q
    ||||||||||| |||||||||||||||||  ||||||||||||    
T  787417 tatgaaaacagcttatgacatgtccataagctgttttcagctt 787375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 1494431 - 1494473
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagctt 271  Q
    ||||||||||| |||||||||||||||||| |||||| |||||    
T  1494431 tatgaaaacagcttatgacatgtccataaactgtttttagctt 1494473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 5902534 - 5902576
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagctt 271  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||    
T  5902534 tatgaaaacagcttatgacatgttcataaactgttttcagctt 5902576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 9996879 - 9996821
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattat 202  Q
    ||||||||||||||||||  ||  |||||||||||||||||||| |||| |||| ||||    
T  9996879 gacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttat 9996821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 10567202 - 10567132
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||| ||| |||  |||  ||||||||||||| |||||||||||||| ||||||| || ||||||    
T  10567202 gatcgacttagttgggctactctattgacataagtactcgtgagactgtttgggagagattgtggaaacag 10567132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 42419934 - 42419869
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||| ||||||||||||||||||  || ||||||||||||| |||  ||| ||||||||    
T  42419934 gacttatttgagtttatcttctgacataagt-tttttgagactgtttgggagaacttacgaaaacag 42419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 9478440 - 9478375
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||| ||||||| |  ||||||||||||||| |||||||||  |||| ||||| |||||    
T  9478440 gacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaaca 9478375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 32837439 - 32837398
Alignment:
Q  169 ataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||||||||||||||| |||  ||||||||||||    
T  32837439 ataagtacttgtgagactgtttgggagaacttatgaaaacag 32837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 38787833 - 38787878
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    |||| ||||||||||| |||||||||||| |||||||||| |||||    
T  38787833 ttatgtgagcttatctactgacataagtatttgtgagactatttgg 38787878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 44438826 - 44438895
Alignment:
Q  231 tgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||| ||||||||||| |||||  |||||||||||| |||| ||||| |||| | |||| |||||    
T  44438826 tgaaaacagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttat 44438895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44458085 - 44458150
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||| ||||||||| ||||| |||   ||| || ||||||||||||||| |||||||||||    
T  44458085 gacttatttaagcttatctgctgacttaaaatcttttgtgactgtttggaagagcttatgaaaaca 44458150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 1318371 - 1318312
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||| |||||| ||| |||||| |||||||||||||||||  |||| |||||||||||    
T  1318371 atttgagattatctactg-cataagcacttgtgagactgtttgtgagagcttatgaaaaca 1318312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 26372656 - 26372696
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgaga 184  Q
    |||| ||||||||||||||||||||||||| | ||||||||    
T  26372656 gactcatttgagcttatcttctgacataagcatttgtgaga 26372696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 33192340 - 33192277
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| |||||||||  |||  ||||||||||| |||||  ||||||||||||    
T  33192340 cttatttgagcttatctgctgacataaacactcatgagactgttt-gaagaacttatgaaaacag 33192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 37276889 - 37276837
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||| || |||||| || | ||||| ||||||||||||||||||    
T  37276889 gatcgacttatttaagtttatctactaatataagcacttgtgagactgtttgg 37276837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 40759299 - 40759259
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagact 186  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  40759299 cttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 44606060 - 44606104
Alignment:
Q  165 tgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||  ||||||||||||||  |||||||||||    
T  44606060 tgacataagtacttgtacgactgtttggaagaacttatgaaaaca 44606104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 22667542 - 22667478
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  |||| ||||| ||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacag 22667478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 22724181 - 22724117
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  |||| ||||| ||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacag 22724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 21872225 - 21872287
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||| || || ||||||    
T  21872225 acttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaa 21872287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 26330255 - 26330317
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||| |||||| |||| ||||||| |||||||||||||| |||||| |||||||||||    
T  26330255 ttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaaca 26330317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 18405763 - 18405825
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||||||| |||||||||||  ||||||||||||||| ||||  ||||||||||||    
T  18405763 ttatttgagcttatctactgacataagt-tttgtgagactgtttgcaagaacttatgaaaacag 18405825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 24158447 - 24158510
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||  |||| ||||| |||||    
T  24158447 cttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaaca 24158510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 24624295 - 24624253
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagctt 271  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  24624295 tatgaaaacagcttatgacatgtccataaactgttttcagctt 24624253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 20194947 - 20195028
Alignment:
Q  130 gagtctatttg-atcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||| || || |||||||| ||||||||||  |||||| | |||||||||||||||  |||| ||||||||||||    
T  20194947 gagtctatttggattgatttatttgaacttatcttcttgcataagcagttgtgagactgtttgtgagagcttatgaaaacag 20195028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 1395793 - 1395733
Alignment:
Q  132 gtctatttg-atcgacttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||| || |||||||||||||||||||| |||| |||| ||||| |||||||||||    
T  1395793 gtctatttgtattgacttatttgagcttatcttatgacgtaagcacttgcgagactgtttg 1395733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 2923619 - 2923567
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    |||||||| ||||||||||  |||||||||||||||  |||||||||||||||    
T  2923619 gacttattcgagcttatctattgacataagtacttgaaagactgtttggaaga 2923567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 20267671 - 20267599
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||| | ||| |||||||||||||  ||||| ||| ||||| |||||||||| |||||||| |||||||||    
T  20267671 tttgattgccttgtttgagcttatctcttgacaaaagcacttgcgagactgttttgaagagatgatgaaaaca 20267599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 24624349 - 24624285
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||| |||| ||||||| || |||| || |||||| |||||||||||||||| ||||||||||||    
T  24624349 cttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacag 24624285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 25130016 - 25129960
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatg 203  Q
    ||||| || ||||||| |||||||| |||||||||||||||||| |||||| |||||    
T  25130016 ttattcgaacttatctactgacatatgtacttgtgagactgtttagaagagcttatg 25129960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 50952415 - 50952347
Alignment:
Q  232 gaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||| ||||||||||| |||||| |||||| ||||| |||| | |||||||| ||||||| ||||    
T  50952415 gaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 6483885 - 6483815
Alignment:
Q  230 atgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||| || ||||||||| ||| ||| |||||||||||| |||  | |||||||||| ||||||||||    
T  6483885 atgaaaaccgtctatgacatggccacaaactgttttcagcttattttaataagctctctaggatagcttat 6483815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 30657424 - 30657374
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||| |||||| |||||||||| |||| ||||| ||||||||||||    
T  30657424 ttatttgagtttatctactgacataagcacttttgagattgtttggaagag 30657374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 37795763 - 37795686
Alignment:
Q  118 attggtaatatagagtctatttg-atcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaag 195  Q
    |||| |||||||| |||| |||| || ||||||||| ||||||||  ||||||||||| ||||| ||||||||||||||    
T  37795763 attgctaatatagcgtctctttggattgacttatttaagcttatccactgacataagt-cttgtaagactgtttggaag 37795686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 41033188 - 41033234
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttgga 193  Q
    ||||||||| |||||| |||||||||| ||| |||||||||||||||    
T  41033188 ttatttgagtttatctactgacataaggactcgtgagactgtttgga 41033234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 26542677 - 26542625
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||||||||  |||||| || |||||||||||||| ||||||||||||||||    
T  26542677 gacttatttgat-ttatctactcacataagtacttgtaagactgtttggaagag 26542625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 28283530 - 28283591
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||| |  |||||| || ||||||||||||||||| ||||  |||||||||    
T  28283530 cttatttgagcttatgtcatgacattagcacttgtgagactgtttgaaagaacttatgaaaa 28283591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 30923877 - 30923954
Alignment:
Q  223 gagagatatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||| |||| |||||| |||||||||||| ||||  |||||||||||| |||| | || ||||||| ||||| ||||    
T  30923877 gagagctatggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttat 30923954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 20210860 - 20210904
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||| |||||| |||||||||  |||||||||||||||||    
T  20210860 ttatttgaggttatctactgacataaccacttgtgagactgtttg 20210904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 25447174 - 25447225
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    |||||||||||| |||||| |||||||||||  ||||||||||||||| ||||    
T  25447174 gacttatttgagtttatctactgacataagt-tttgtgagactgtttgcaaga 25447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 27795944 - 27795988
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    ||||||||||||||||| ||| |||||| |||||||| |||||||    
T  27795944 cttatttgagcttatctactggcataagcacttgtgaaactgttt 27795988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 41724350 - 41724306
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    |||||||| ||||||| ||||||||||||||||| |||| |||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttg 41724306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 45590792 - 45590732
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    ||||| ||||| ||||||| ||  |||||| |||||||||||||||||| |||| ||||||    
T  45590792 gacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 49605783 - 49605827
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||| |||||||||  ||||||||||||||||| ||||||    
T  49605783 ttatttgagtttatcttctagcataagtacttgtgagagtgtttg 49605827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 50211875 - 50211811
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||| ||||||||| || ||||||| |||||| ||||||||||  |||  |||||||||||    
T  50211875 acttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaaca 50211811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 51130891 - 51130827
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaac 208  Q
    |||||||||||||| |||| ||| |||||||| ||| || | ||||||| |||| ||||||||||    
T  51130891 gacttatttgagctcatctgctggcataagtagttgcgaaattgtttgggagagcttatgaaaac 51130827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 4970721 - 4970785
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||| |||  |||||||||||    
T  4970721 gacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgggagaacttatgaaaaca 4970785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 8427151 - 8427106
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  8427151 ttatttgagcttatctactaacataagtacttgtgagactgtttgg 8427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 34950080 - 34950145
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||| | ||| || ||| ||||||||||||||| ||||||| |||||||||||    
T  34950080 gacttatttgagcttatatgctggcacaagcacttgtgagactgttgggaagagcttatgaaaaca 34950145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 33894766 - 33894702
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||   ||||||||| |||||||||||||||||  |||| ||||||||||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacag 33894702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 24048680 - 24048621
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    ||||||||||| |||||| |||||||||||||||   |||||||||||||||| ||||||    
T  24048680 acttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatga 24048621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 31002810 - 31002876
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||| |||||||||||| ||| |||||| | ||||||||||||||||| ||| |||| |||||||    
T  31002810 gacttaattgagcttatctactgtcataagcaattgtgagactgtttggatgagcttataaaaacag 31002876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 2825158 - 2825227
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaa 206  Q
    |||||| || |||||||||||||||| || | ||||| |||||||||||| |||||||||  ||||||||    
T  2825158 tttgattgatttatttgagcttatctacttatataagcacttgtgagactctttggaagaacttatgaaa 2825227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 14823798 - 14823859
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaa 205  Q
    |||||||||||||||||||  |||| ||||||||| ||||| ||||| |||||| |||||||    
T  14823798 gacttatttgagcttatctaatgacttaagtacttttgagattgttttgaagagcttatgaa 14823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 15270805 - 15270866
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaa 205  Q
    |||||||||||||||||||  |||| ||||||||| ||||| ||||| |||||| |||||||    
T  15270805 gacttatttgagcttatctaatgacttaagtacttttgagattgttttgaagagcttatgaa 15270866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44151405 - 44151470
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||| ||||| | ||||||||||||||||||||| | ||||  |||| |||||||||||    
T  44151405 gacttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaaca 44151470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 39539778 - 39539838
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttata 301  Q
    |||||||||||||||||  |||||||||||| ||| ||||||||| | | |||||||||||    
T  39539778 ttatgacatgtccataagctgttttcagcttattttgacaagctcccgaggatagcttata 39539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 9423579 - 9423650
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||| ||||| |||||||||||| |||||  |||||||||||| |||| | |||||||| | ||||||||||    
T  9423579 tatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttat 9423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 28727693 - 28727756
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaac 208  Q
    ||||||||||||||||||| |||| |||| ||||| |||||||||||  |||| ||||| ||||    
T  28727693 acttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaac 28727756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 34036058 - 34035996
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||  ||||||||  |||||||||    
T  34036058 gacttatttgagcttatctactgacatatgta-ttgtgagactacttggaagaacttatgaaaa 34035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 12834947 - 12834989
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagctt 271  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  12834947 tatggaaacagcttatgacatgtccataaactgttttcagctt 12834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 19302492 - 19302557
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||||| |||||||||||  |||||||| | ||||| |||  ||||||||||||    
T  19302492 gacttatttgagcttatctactgacataagt-tttgtgagaatatttgggagaatttatgaaaacag 19302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 3836614 - 3836675
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||||| ||| | |||| |||||||| ||||||||| |||  |||||||||    
T  3836614 cttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaa 3836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 25670571 - 25670636
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagata 294  Q
    ||||||||||  |||||||||||  ||||| |||||||||||| |||  |||||||||| ||||||    
T  25670571 tatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 25907567 - 25907612
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    |||| |||||||| |||| |||||||||| ||||||||||||||||    
T  25907567 acttgtttgagctaatctactgacataagcacttgtgagactgttt 25907612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 8094445 - 8094381
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| ||  |||||| |||||||||||| ||||  |||  ||||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacag 8094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 29363647 - 29363603
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||    
T  29363647 cttatttgaacttatctactaacataagcacttgtgagactgttt 29363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 47007121 - 47007069
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtt 189  Q
    |||||| || |||||||||||||||   || ||||||||||||||||||||||    
T  47007121 tttgattgagttatttgagcttatccattggcataagtacttgtgagactgtt 47007069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 33204319 - 33204370
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  33204319 gatcgacttatttgagcttatctactgacataagt-tttgtgagactgtttgg 33204370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 41638239 - 41638303
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||| |||||| ||||| ||| |||||| | |||||||||||||||| |||||||||||||||||    
T  41638239 cttaattgagcctatctactggcataagcatttgtgagactgtttgggagagattatgaaaacag 41638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 15581393 - 15581342
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||| ||||||||| |||||||||| |||||||||| ||||||||||||    
T  15581393 cttattttagcttatctactgacataagcacttgtgagattgtttggaagag 15581342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 21002294 - 21002244
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||||||||||||| ||  |||||| ||||||||||||||||||||||    
T  21002294 cttatttgagcttatctacttgcataagaacttgtgagactgtttggaaga 21002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 32515374 - 32515436
Alignment:
Q  148 tatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||| |||||| || ||||||| |||||||||||||||||| |||| ||||| ||||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacag 32515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 28837275 - 28837328
Alignment:
Q  137 tttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    |||||| | ||||||||||||||||| |||||||||| ||||| ||||||||||    
T  28837275 tttgattggcttatttgagcttatctactgacataagcacttgagagactgttt 28837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 46504147 - 46504212
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||| |||||| | | |||||||| ||||||||||||| || |||| |||||||||||    
T  46504147 gacttatttgagtttatctaccggcataagtatttgtgagactgttcggtagagcttatgaaaaca 46504212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 2295235 - 2295172
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| ||| |||||||  |||||||||||||||| |||  ||||||||||||    
T  2295235 cttatttgagcttatctactggcataagtt-ttgtgagactgtttgggagaacttatgaaaacag 2295172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 6292633 - 6292585
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||| |||||||||| |||| ||||| |||||||    
T  6292633 gacttatttgagcttatctactgacataagcacttttgagattgtttgg 6292585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 27140558 - 27140490
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttataa 302  Q
    |||||| |||||||||||||||||  |||||||||||| |||  | |||||||| | ||||||||||||    
T  27140558 aaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataa 27140490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 4276580 - 4276639
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    |||||||||||||||||||||| |||||| | |||| ||||| ||||||| || ||||||    
T  4276580 acttatttgagcttatcttctggcataagcatttgttagactatttggaaaagcttatga 4276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 18327077 - 18327140
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||| ||| |||||| |||| ||| ||| |||||||||  |||||||||||    
T  18327077 cttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaaca 18327140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 24460330 - 24460377
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||||| ||||||| ||||||| || |||||||||||||||||    
T  24460330 gacttatttgaacttatctactgacatgagcacttgtgagactgtttg 24460377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 28689442 - 28689509
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttata 301  Q
    |||||| |||||||||||||||||  |||||||||||| |||  | ||||| || |||||||||||||    
T  28689442 aaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttata 28689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 31517671 - 31517734
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||| | ||| |||||| |||||||||||||||||| |||  |||| ||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaaca 31517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 4757500 - 4757414
Alignment:
Q  124 aatatagagtctatttgatc-gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||| |||| |  |||||||||||||||||||  ||||||||  |||||||||||  ||||| |||  |||||||||||    
T  4757500 aatatagagtctctttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaaca 4757414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 10199394 - 10199464
Alignment:
Q  230 atgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||| || ||||||||||| |||||  |||||||||||| |||  | ||||||||||| |||||||||    
T  10199394 atgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttat 10199464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 29793627 - 29793669
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagact 186  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  29793627 gacttatttgagcttatctactgacataaacacttgtgagact 29793669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 36070319 - 36070257
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||  |||||||||| |||||| |||||||||||||||| | |||  |||||||||||    
T  36070319 ttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaaca 36070257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 3597210 - 3597263
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||||||||| ||||||  ||| ||||  |||||||||||||||||||||||    
T  3597210 gacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagag 3597263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 11217942 - 11217991
Alignment:
Q  143 cgacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||| |||| ||||||| || ||||||||||| ||||||    
T  11217942 cgacttatttgagctaatctactgacatgagcacttgtgagacggtttgg 11217991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 12564428 - 12564481
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||||||||||| | |||| ||||| ||||||| |||||||||| ||||    
T  12564428 gacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagag 12564481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 17009511 - 17009576
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||| |||||| ||||||||| | |||||  |||||||||| |||| ||||| |||||    
T  17009511 gacttatttgagtttatctactgacataattccttgttggactgtttgggagagcttatggaaaca 17009576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 49365945 - 49365978
Alignment:
Q  298 tataagcgcttaactatgttgtttatccaaacag 331  Q
    |||||||||||||||| |||||||||||||||||    
T  49365945 tataagcgcttaactaagttgtttatccaaacag 49365978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 50644184 - 50644248
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||||| || ||||| ||  |||||||||||||||| |||  |||||||||||    
T  50644184 gacttatttgagcttatctactaacatatgtt-ttgtgagactgtttgggagaacttatgaaaaca 50644248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 4622234 - 4622182
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    ||||||||| |||||| ||  ||||||||| |||||| |||||||||||||||    
T  4622234 gacttatttaagcttaactaatgacataagaacttgttagactgtttggaaga 4622182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 10199337 - 10199385
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||| || ||||||| |||||||| ||| |||||    
T  10199337 gacttatttgagcttatctactaacataagcacttgtgacactatttgg 10199385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 11639401 - 11639461
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctcta 289  Q
    ||||||||||| |||||||||||||||||  |||||| ||||| |||  | ||||||||||    
T  11639401 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctcta 11639461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 15784462 - 15784411
Alignment:
Q  140 gatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||||||| || ||||||||  |||| |||||||||||    
T  15784462 gatcgacttatttgagcttatctactaacataagt-tttgtaagactgtttgg 15784411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 15819262 - 15819202
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    ||||| |||||  |||||| ||| |||||||||||||| |||||||||| |||| ||||||    
T  15819262 gacttgtttgaatttatctactgccataagtacttgtgtgactgtttgggagagcttatga 15819202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 17423077 - 17423109
Alignment:
Q  297 ttataagcgcttaactatgttgtttatccaaac 329  Q
    |||||||||||||| ||||||||||||||||||    
T  17423077 ttataagcgcttaattatgttgtttatccaaac 17423109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 28836982 - 28837026
Alignment:
Q  152 tgagcttatcttctgacataagtacttgtgagactgtttggaaga 196  Q
    |||||| |||| |||||||||| |||||||||||||||| |||||    
T  28836982 tgagctaatctactgacataagcacttgtgagactgtttagaaga 28837026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 29415866 - 29415898
Alignment:
Q  298 tataagcgcttaactatgttgtttatccaaaca 330  Q
    ||||||||||||| |||||||||||||||||||    
T  29415866 tataagcgcttaattatgttgtttatccaaaca 29415898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 35080066 - 35080122
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagct 297  Q
    ||||||||||| |||||  |||||| ||||| ||||||||||||||| | |||||||    
T  35080066 ttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagct 35080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 38001734 - 38001671
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||| |||||  |||||||||||  |||||||||||||||| |||  ||||||||||||    
T  38001734 cttatttgagtttatcaactgacataagtt-ttgtgagactgtttgggagaacttatgaaaacag 38001671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 37969018 - 37968971
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  37969018 gacttgtttgagcttatctactgacataagtacttgtgaaactgtttg 37968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 14714777 - 14714835
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||||||||||||  |||||||||| |||||||| ||| ||||| ||||||||||||||    
T  14714777 atttgagcttatccactgacataagcacttgtgaaactatttgggagagattatgaaaa 14714835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 38033956 - 38034022
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||| ||| ||| |||||| || |||||||||||||||||||  |||| |||||||    
T  38033956 gacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacag 38034022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 13781812 - 13781857
Alignment:
Q  152 tgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||||| || |||||||||||||||||||||||||| ||||    
T  13781812 tgagcttatctactaacataagtacttgtgagactgtttggtagag 13781857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 17498852 - 17498791
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaa 205  Q
    |||||||||||||||||||  |||| ||||||||| ||||| ||||| |||||| |||||||    
T  17498852 gacttatttgagcttatctaatgacttaagtacttttgagattgttttgaagagcttatgaa 17498791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 10391481 - 10391418
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||| ||||||||| ||| |||||  |||||||||| |||||||||||| |||| ||||||    
T  10391481 cttatttaagcttatctgctggcataatcacttgtgagattgtttggaagagtttataaaaaca 10391418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 499660 - 499726
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||||||||||| || |||||||||| || ||| || |||||||| |||  ||||||||||||    
T  499660 gacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacag 499726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 10791135 - 10791089
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||    
T  10791135 gacttatttcagcttatcaattgacataagtacttgtgagactgttt 10791089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 209
Target Start/End: Complemental strand, 10907488 - 10907454
Alignment:
Q  175 acttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||||||||| |||||||||||    
T  10907488 acttgtgagactgtttggaagagcttatgaaaaca 10907454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 36796636 - 36796686
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaa 194  Q
    |||||||||||||||||||  ||||||||  ||||||||||||| ||||||    
T  36796636 gacttatttgagcttatctaatgacataaacacttgtgagactgcttggaa 36796686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 37611147 - 37611209
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||| ||||||| ||| || |||||||||||||| ||||||  |||| |||||||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaaca 37611209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 37787877 - 37787939
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||| ||||||| ||| || |||||||||||||| ||||||  |||| |||||||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaaca 37787939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 40205064 - 40205130
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||| |||| ||||||||||||  |||||||||||| |||| | |||||||| | ||||||||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttat 40205130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 2103256 - 2103179
Alignment:
Q  132 gtctatttgatcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||| ||||||||||||||||||| ||||   ||||||||| ||  ||||| ||||||| ||||||  ||||||||||    
T  2103256 gtctgtttgatcgacttatttgagtttattaactgacataactaagtgtgaaactgtttagaagagcgtatgaaaaca 2103179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 10771819 - 10771864
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    ||||||||||||||||| ||| |||||| |||||||||| ||||||    
T  10771819 cttatttgagcttatctactggcataagcacttgtgagattgtttg 10771864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 11457239 - 11457174
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||||||||||||  || || ||  |||||||||||||||| |||||| ||||| |||||    
T  11457239 gacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaaca 11457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 12459930 - 12459995
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||  |||||||| |||||||||| || ||||||||||||||| |||   ||||||||||    
T  12459930 gacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaaca 12459995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||||| ||||||||||   |||||||||||||||| |||  |||||||||    
T  15015982 cttatttgagcttatctactgacataag-ctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 2568797 - 2568733
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| |||   |||| ||||| |||||||||| |||||  ||||||||||||    
T  2568797 cttatttgagcttatctactggtgtaagcacttgagagactgtttagaagaacttatgaaaacag 2568733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 6749473 - 6749429
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtt 189  Q
    ||||||||||| |||| | | ||||||||||||||||||||||||    
T  6749473 acttatttgagattatatgcggacataagtacttgtgagactgtt 6749429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 7550450 - 7550494
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttg 191  Q
    |||||||||||||||  ||||||||| ||||||||||||| ||||    
T  7550450 ttatttgagcttatccactgacataattacttgtgagactctttg 7550494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 12425714 - 12425667
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||||||||    
T  12425714 gacttatttgagcttatctactgtcataagt-tttgtgagactgtttgg 12425667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 16937814 - 16937877
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| ||  |||||||  |||||||| |||||||||||  ||||||||||||    
T  16937814 cttatttgagcttatctactagcataagtt-ttgtgagagtgtttggaagaacttatgaaaacag 16937877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 19138712 - 19138760
Alignment:
Q  239 gtttatgacatgtccataaagtgttttcagcttttttcgacaagctctc 287  Q
    ||||||||||||| |||||| |||||||||||| |||| | ||||||||    
T  19138712 gtttatgacatgtacataaattgttttcagcttatttccataagctctc 19138760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 28586763 - 28586819
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagct 297  Q
    ||||||||| ||| |||  |||||||||||| |||||| |||||||||| |||||||    
T  28586763 ttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatagct 28586819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 38104873 - 38104913
Alignment:
Q  260 tgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||||||||| |||| | |||||||||||||||||||||    
T  38104873 tgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 159963 - 160029
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||||||||||||| ||||   ||||||||||| |||| ||||||||| || ||||||||||    
T  159963 aaacagtttatgacatgtctataagcagttttcagcttatttccacaagctctttaggatagcttat 160029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 34939824 - 34939758
Alignment:
Q  234 aaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    |||||| |||||||||||||||||| |||||||||||| |||| | || ||||| | ||||||||||    
T  34939824 aaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttat 34939758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 2732185 - 2732242
Alignment:
Q  153 gagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||| ||| |||||||||| |||||||||||||||||||| || ||||| ||||||    
T  2732185 gagcttgtctactgacataagcacttgtgagactgtttggaaaagcttatggaaacag 2732242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 32976110 - 32976061
Alignment:
Q  153 gagcttatcttctgacataagtacttgtgagactgtttggaagagattat 202  Q
    |||||||| | ||| |||||||||||||||||||||||||||||| ||||    
T  32976110 gagcttatttactggcataagtacttgtgagactgtttggaagagcttat 32976061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 33067237 - 33067172
Alignment:
Q  235 aacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttat 300  Q
    ||||||||| || |||||||||||  |||||||| || |||| |||||||||| ||||||||||||    
T  33067237 aacagtttaggaaatgtccataaatcgttttcagtttatttctacaagctctccaagatagcttat 33067172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 33385665 - 33385604
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||| ||||||| |||| ||||| |||||||| |||||||||||||| ||||| ||||||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 33385604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 34538207 - 34538276
Alignment:
Q  233 aaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagcttataa 302  Q
    ||||||| ||| |||||||||||||| | |||||||||| |||  |||| ||||||| ||||||||||||    
T  34538207 aaaacagcttacgacatgtccataaactattttcagcttatttatacaaactctctaggatagcttataa 34538276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 2455749 - 2455689
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    |||||||||| ||||| |||||||| | ||||||||||||||| ||||| ||||| |||||    
T  2455749 atttgagcttttcttcagacataagcatttgtgagactgtttgaaagagcttatggaaaca 2455689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 26559169 - 26559233
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||| ||| || ||| |||||| | ||||||||||||||||||||  |||||||||||    
T  26559169 acttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaaca 26559233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 27894169 - 27894114
Alignment:
Q  149 atttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    ||||||||||| || | |||||||||||||||||||||||||| | ||| ||||||    
T  27894169 atttgagcttacctacggacataagtacttgtgagactgtttgaacgagcttatga 27894114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 34544129 - 34544176
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttc 276  Q
    |||||||||||||||||||||||||||||| | |||||| ||| ||||    
T  34544129 tatgaaaacagtttatgacatgtccataaactattttcatcttatttc 34544176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 1669783 - 1669849
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatag 295  Q
    ||||||||||  |||||||||||| ||||  |||||||||||  ||||||||||| ||||| |||||    
T  1669783 tatgaaaacaacttatgacatgtctataagctgttttcagctcatttcgacaagccctctaggatag 1669849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 4420716 - 4420658
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctta 299  Q
    ||||||||||| |||||  |||||||||||| |||| | |||||||| |||||||||||    
T  4420716 ttatgacatgttcataagctgttttcagcttatttccataagctctccaagatagctta 4420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 7351600 - 7351646
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgttt 190  Q
    |||||||||||| |||||| |||||||||| |||||||||| |||||    
T  7351600 gacttatttgagtttatctactgacataagcacttgtgagattgttt 7351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 27857496 - 27857434
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||| |||||| ||||||||   |||||||| ||||||||| |||| |||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaaca 27857434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 29249534 - 29249468
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    ||||||||||||||||| | |||  |||||||||||| ||||||||| | |||  ||||||||||||    
T  29249534 gacttatttgagcttatttactgttataagtacttgtaagactgtttcgtagatcttatgaaaacag 29249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 33089647 - 33089605
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagact 186  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||    
T  33089647 gacttatttgagcttatctactgacatatgtatttgtgagact 33089605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 35070398 - 35070444
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttgg 192  Q
    ||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  35070398 cttatttgagcttatctactaacataagcacttgtgggactgtttgg 35070444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 281777 - 281830
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    |||||| ||||| |||| |  |||||||||||||||||||||||||||| ||||    
T  281777 gacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagag 281830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 2455951 - 2455886
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||||| | | |||||| ||||| |||| ||||| |||||| ||||| |||||    
T  2455951 gacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaaca 2455886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 3180998 - 3181051
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||||| ||||||| | |||||||| |||||||||||| |||| |||||    
T  3180998 gacttatttgaacttatctacagacataagcacttgtgagactatttgaaagag 3181051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 5551589 - 5551528
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||| ||| |||| || |||||||||||| |||||||  |||| |||||||||    
T  5551589 cttatttgagcttgtctactgatatgagtacttgtgagtctgtttgacagagcttatgaaaa 5551528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 10031860 - 10031811
Alignment:
Q  157 ttatcttctgacataagtacttgtgagactgtttggaagagattatgaaa 206  Q
    |||||| |||||||||| ||||||||||||||||| |||||  |||||||    
T  10031860 ttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaa 10031811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 30533941 - 30533865
Alignment:
Q  135 tatttgatcgacttatttgagcttatcttctgacataagtacttgtg--agactgtttggaagagattatgaaaaca 209  Q
    |||| ||| |||||||| |||||||||| |||| |||||||||||||  ||| ||||||| |||| |||| ||||||    
T  30533941 tattggattgacttattcgagcttatctactgatataagtacttgtgatagattgtttgggagagcttataaaaaca 30533865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 31774516 - 31774455
Alignment:
Q  146 cttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    |||||||||| |||||| | | |||||| |||| |||||||||||||||||| | |||||||    
T  31774516 cttatttgagtttatctaccggcataagcacttatgagactgtttggaagagctcatgaaaa 31774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 2460081 - 2460145
Alignment:
Q  145 acttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaaca 209  Q
    ||||||||||||||||   ||  ||||||||||||||||||||||||  |||| ||||| |||||    
T  2460081 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaaca 2460145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 7480269 - 7480305
Alignment:
Q  297 ttataagcgcttaactatgttgtttatccaaacaggg 333  Q
    |||||||| |||||||| |||||||||||||||||||    
T  7480269 ttataagcacttaactaagttgtttatccaaacaggg 7480305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 31461810 - 31461750
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 207  Q
    ||||||||||||||||  |  |||||||||||||||||||||| | ||||| ||| |||||    
T  31461810 ttatttgagcttatctatttgcataagtacttgtgagactgttcgcaagagcttacgaaaa 31461750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 27074 - 27017
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctt 298  Q
    ||||||||||| |||||| |||||||||||| |||| | |||||||||| ||||||||    
T  27074 ttatgacatgtgcataaactgttttcagcttatttccataagctctctatgatagctt 27017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 989 - 1072
Alignment:
Q  128 tagagtctatttg-atcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||| |||| || ||||||| | |||||||||  || ||||| ||| |||||| ||||||||||||| ||||||||||||    
T  989 tagagtctgtttggattgacttatgttagcttatctattgtcataaatacatgtgagtctgtttggaagagcttatgaaaacag 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 2986 - 2903
Alignment:
Q  128 tagagtctatttg-atcgacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 210  Q
    |||||||| |||| || ||||||| | |||||||||  || ||||| ||| |||||| ||||||||||||| ||||||||||||    
T  2986 tagagtctgtttggattgacttatgttagcttatctattgtcataaatacatgtgagtctgtttggaagagcttatgaaaacag 2903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 9710 - 9760
Alignment:
Q  147 ttatttgagcttatcttctgacataagtacttgtgagactgtttggaagag 197  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||| ||||    
T  9710 ttatttgagtttatctactaacataaatacttgtgagactgtttgggagag 9760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 12701 - 12758
Alignment:
Q  241 ttatgacatgtccataaagtgttttcagcttttttcgacaagctctctaagatagctt 298  Q
    |||||||||||||||||  ||||||||||||   || | |||||||||||||||||||    
T  12701 ttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagctt 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 27711 - 27658
Alignment:
Q  150 tttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatg 203  Q
    |||||||| |||| |||||||| |||||| ||||||||||||| |||| |||||    
T  27711 tttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatg 27658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 257
Target Start/End: Original strand, 9784 - 9812
Alignment:
Q  229 tatgaaaacagtttatgacatgtccataa 257  Q
    |||||||||||||||||||||||||||||    
T  9784 tatgaaaacagtttatgacatgtccataa 9812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 4043 - 3983
Alignment:
Q  148 tatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaac 208  Q
    ||||||| ||||| |  ||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  4043 tatttgaacttatatattgatataagcacttgtgagactgtttggaagagtttatggaaac 3983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 6951 - 6891
Alignment:
Q  144 gacttatttgagcttatcttctgacataagtacttgtgagactgtttggaagagattatga 204  Q
    |||||||||||| |||||| ||  |||||  |||||||||||||||||| |||| ||||||    
T  6951 gacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University