View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1384_low_8 (Length: 321)
Name: NF1384_low_8
Description: NF1384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1384_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 181; Significance: 9e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 40776456 - 40776256
Alignment:
| Q |
24 |
ctgagtttgggtagttattgttcggtgttttggttttgttgatttgttctttattagttaaatgaatcaatgaaagtgattaattagtataacttttaag |
123 |
Q |
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| T |
40776456 |
ctgagtttcggtagttattgttcggtgttttggttttgttgatttgttctttattagttaaatgaatcaatgaaagtgattaattagtataacttttgag |
40776357 |
T |
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| Q |
124 |
attgaacagtaaaataatgcag-agttgatttggaagaaagataaaaattcatttccaaagagtgaaattatttaggccctgattagataaacatcttca |
222 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
40776356 |
attgaacagtaaaataatgcagcagttgatttggaagaaagataaaaattcatttccaaagagtgaaatcatttaggccctgattagataaacatcttca |
40776257 |
T |
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| Q |
223 |
t |
223 |
Q |
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| T |
40776256 |
t |
40776256 |
T |
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