View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1384_low_9 (Length: 312)

Name: NF1384_low_9
Description: NF1384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1384_low_9
NF1384_low_9
[»] scaffold0180 (1 HSPs)
scaffold0180 (68-308)||(10459-10698)
[»] scaffold0298 (1 HSPs)
scaffold0298 (69-308)||(248-487)
[»] chr8 (32 HSPs)
chr8 (69-308)||(38184862-38185101)
chr8 (173-308)||(20494554-20494689)
chr8 (188-308)||(21514367-21514487)
chr8 (188-305)||(22366072-22366186)
chr8 (188-305)||(22723251-22723368)
chr8 (127-216)||(18023564-18023653)
chr8 (188-274)||(4380865-4380951)
chr8 (188-261)||(18816551-18816624)
chr8 (130-195)||(18816306-18816371)
chr8 (130-194)||(22208246-22208310)
chr8 (245-308)||(18023647-18023710)
chr8 (130-194)||(22483763-22483827)
chr8 (133-195)||(36732426-36732488)
chr8 (69-129)||(15635261-15635322)
chr8 (75-136)||(21860706-21860767)
chr8 (215-285)||(24907914-24907986)
chr8 (130-195)||(21514667-21514732)
chr8 (130-195)||(4380628-4380693)
chr8 (72-133)||(22920142-22920203)
chr8 (133-197)||(22258320-22258384)
chr8 (131-195)||(22483914-22483978)
chr8 (70-136)||(20387306-20387372)
chr8 (130-184)||(21399704-21399758)
chr8 (130-184)||(21794197-21794251)
chr8 (130-184)||(22345151-22345205)
chr8 (130-184)||(22356811-22356865)
chr8 (95-136)||(22617455-22617496)
chr8 (130-197)||(21676511-21676576)
chr8 (130-197)||(21676604-21676669)
chr8 (130-197)||(21678857-21678922)
chr8 (188-237)||(24239756-24239805)
chr8 (130-182)||(12577869-12577920)
[»] chr3 (32 HSPs)
chr3 (69-308)||(2247816-2248055)
chr3 (188-308)||(24546876-24546996)
chr3 (188-306)||(24549207-24549325)
chr3 (193-305)||(25104036-25104148)
chr3 (188-274)||(17208234-17208320)
chr3 (188-274)||(14520156-14520242)
chr3 (74-132)||(1988306-1988364)
chr3 (130-195)||(45803342-45803407)
chr3 (130-184)||(22841290-22841344)
chr3 (130-195)||(14641559-14641624)
chr3 (130-195)||(17208500-17208565)
chr3 (130-195)||(29907615-29907680)
chr3 (130-195)||(29948781-29948846)
chr3 (130-195)||(29997935-29998000)
chr3 (130-194)||(14152410-14152474)
chr3 (130-195)||(14520422-14520487)
chr3 (134-191)||(5215627-5215684)
chr3 (130-195)||(12917317-12917382)
chr3 (130-194)||(15566721-15566785)
chr3 (130-184)||(17669709-17669763)
chr3 (130-184)||(54875485-54875539)
chr3 (95-136)||(11325238-11325279)
chr3 (95-136)||(13836959-13837000)
chr3 (188-237)||(17758665-17758714)
chr3 (188-237)||(19059985-19060034)
chr3 (96-134)||(10684-10722)
chr3 (130-184)||(3527168-3527222)
chr3 (130-184)||(6156698-6156751)
chr3 (95-136)||(15233012-15233053)
chr3 (95-136)||(15238880-15238921)
chr3 (188-237)||(40038987-40039036)
chr3 (82-134)||(8927736-8927788)
[»] chr7 (50 HSPs)
chr7 (69-308)||(831800-832038)
chr7 (69-308)||(1196980-1197218)
chr7 (69-308)||(34958208-34958447)
chr7 (188-308)||(4690917-4691037)
chr7 (188-308)||(47095128-47095248)
chr7 (188-305)||(18079554-18079671)
chr7 (188-308)||(43745332-43745452)
chr7 (191-274)||(20252446-20252529)
chr7 (188-274)||(15575905-15575991)
chr7 (193-274)||(18874922-18875003)
chr7 (69-136)||(37727007-37727074)
chr7 (75-136)||(14153047-14153108)
chr7 (130-192)||(708440-708502)
chr7 (132-194)||(20252195-20252257)
chr7 (130-195)||(15575660-15575725)
chr7 (70-136)||(42041987-42042053)
chr7 (130-195)||(43745632-43745697)
chr7 (130-195)||(47095428-47095493)
chr7 (130-194)||(8513764-8513828)
chr7 (130-181)||(38299738-38299789)
chr7 (188-308)||(48212984-48213089)
chr7 (69-134)||(15726150-15726215)
chr7 (130-195)||(19195588-19195652)
chr7 (130-194)||(8488105-8488169)
chr7 (133-192)||(18874679-18874740)
chr7 (130-194)||(4690674-4690738)
chr7 (130-194)||(43276755-43276818)
chr7 (95-134)||(12201275-12201314)
chr7 (130-184)||(58424-58478)
chr7 (130-184)||(16250233-16250287)
chr7 (130-184)||(33556116-33556170)
chr7 (188-229)||(19070012-19070053)
chr7 (133-195)||(19283030-19283094)
chr7 (96-136)||(12207881-12207921)
chr7 (95-134)||(1613378-1613417)
chr7 (133-172)||(3287743-3287782)
chr7 (133-184)||(13315096-13315147)
chr7 (130-185)||(25943253-25943308)
chr7 (133-184)||(36300655-36300706)
chr7 (130-184)||(13744521-13744575)
chr7 (133-187)||(15700897-15700951)
chr7 (130-184)||(15720766-15720820)
chr7 (159-197)||(42565872-42565910)
chr7 (205-285)||(3192149-3192230)
chr7 (95-132)||(7529952-7529989)
chr7 (134-195)||(15700750-15700810)
chr7 (188-237)||(16383825-16383874)
chr7 (95-136)||(39995046-39995087)
chr7 (133-195)||(48212741-48212805)
chr7 (96-136)||(15731066-15731106)
[»] chr4 (33 HSPs)
chr4 (69-308)||(17142888-17143124)
chr4 (69-308)||(15747723-15747961)
chr4 (188-308)||(2424643-2424763)
chr4 (188-308)||(26445883-26446003)
chr4 (188-307)||(14630814-14630933)
chr4 (188-285)||(10237326-10237423)
chr4 (231-307)||(16025917-16025993)
chr4 (69-136)||(14035562-14035629)
chr4 (130-195)||(25513827-25513892)
chr4 (133-195)||(14631111-14631173)
chr4 (130-197)||(9638984-9639051)
chr4 (76-134)||(14049425-14049483)
chr4 (130-195)||(16296914-16296979)
chr4 (79-136)||(30147760-30147817)
chr4 (133-194)||(33186880-33186941)
chr4 (130-195)||(35660932-35660997)
chr4 (130-194)||(12424301-12424367)
chr4 (253-308)||(25513655-25513710)
chr4 (132-195)||(26446183-26446246)
chr4 (91-134)||(13899044-13899087)
chr4 (188-237)||(15213681-15213730)
chr4 (188-237)||(54363351-54363400)
chr4 (96-136)||(16370912-16370952)
chr4 (130-184)||(9622476-9622530)
chr4 (130-184)||(10273370-10273424)
chr4 (133-179)||(13847193-13847239)
chr4 (130-184)||(55583183-55583237)
chr4 (133-182)||(15239830-15239879)
chr4 (188-237)||(19622239-19622288)
chr4 (98-134)||(3863479-3863515)
chr4 (98-134)||(3872236-3872272)
chr4 (273-305)||(10237422-10237454)
chr4 (104-136)||(32490564-32490596)
[»] chr5 (19 HSPs)
chr5 (188-307)||(18744558-18744677)
chr5 (188-308)||(1627324-1627444)
chr5 (188-308)||(660469-660586)
chr5 (188-274)||(23199463-23199549)
chr5 (69-136)||(6766577-6766644)
chr5 (130-194)||(18744851-18744915)
chr5 (130-194)||(23199218-23199282)
chr5 (75-134)||(17813303-17813362)
chr5 (130-195)||(16063727-16063792)
chr5 (69-136)||(24276664-24276731)
chr5 (69-136)||(24385482-24385549)
chr5 (131-195)||(660766-660829)
chr5 (95-136)||(7786001-7786042)
chr5 (155-195)||(6551326-6551366)
chr5 (130-184)||(32607327-32607381)
chr5 (91-134)||(26754293-26754336)
chr5 (70-136)||(21980233-21980299)
chr5 (134-184)||(31621963-31622013)
chr5 (95-136)||(21553580-21553621)
[»] chr1 (27 HSPs)
chr1 (188-308)||(28476990-28477110)
chr1 (195-285)||(20822729-20822819)
chr1 (188-285)||(20836533-20836630)
chr1 (188-274)||(24719766-24719852)
chr1 (69-136)||(21180444-21180511)
chr1 (68-136)||(24960705-24960772)
chr1 (76-136)||(13227708-13227768)
chr1 (132-194)||(24719523-24719585)
chr1 (133-195)||(50544848-50544910)
chr1 (188-245)||(12710623-12710680)
chr1 (130-195)||(38056683-38056748)
chr1 (130-195)||(12710843-12710908)
chr1 (130-195)||(22145677-22145742)
chr1 (130-195)||(28476745-28476810)
chr1 (76-136)||(29535896-29535956)
chr1 (133-184)||(17901808-17901859)
chr1 (134-195)||(6834152-6834213)
chr1 (133-197)||(8276003-8276067)
chr1 (130-184)||(8306593-8306647)
chr1 (70-132)||(14801211-14801273)
chr1 (70-132)||(14810085-14810147)
chr1 (133-179)||(635018-635064)
chr1 (132-184)||(35895086-35895138)
chr1 (133-184)||(34392755-34392806)
chr1 (130-195)||(24007236-24007301)
chr1 (159-197)||(39061295-39061333)
chr1 (188-234)||(41931308-41931354)
[»] scaffold1186 (2 HSPs)
scaffold1186 (188-307)||(1699-1818)
scaffold1186 (133-195)||(1996-2058)
[»] scaffold0369 (2 HSPs)
scaffold0369 (189-308)||(15872-15991)
scaffold0369 (141-195)||(15637-15691)
[»] scaffold0005 (2 HSPs)
scaffold0005 (188-307)||(186450-186569)
scaffold0005 (133-195)||(186210-186272)
[»] scaffold0878 (2 HSPs)
scaffold0878 (188-308)||(3678-3798)
scaffold0878 (130-195)||(3433-3498)
[»] scaffold0056 (2 HSPs)
scaffold0056 (188-284)||(15878-15974)
scaffold0056 (133-195)||(18251-18313)
[»] scaffold0516 (2 HSPs)
scaffold0516 (188-277)||(7578-7667)
scaffold0516 (130-195)||(5316-5381)
[»] chr2 (15 HSPs)
chr2 (188-283)||(29114464-29114559)
chr2 (188-274)||(21315734-21315820)
chr2 (188-274)||(21369002-21369088)
chr2 (188-274)||(21335524-21335610)
chr2 (190-248)||(23610356-23610414)
chr2 (130-194)||(21315487-21315551)
chr2 (130-194)||(21335277-21335341)
chr2 (130-191)||(21369273-21369334)
chr2 (91-134)||(38929209-38929252)
chr2 (130-195)||(23610602-23610667)
chr2 (96-136)||(25652045-25652085)
chr2 (130-184)||(23801483-23801537)
chr2 (96-136)||(24161099-24161139)
chr2 (155-195)||(34491276-34491316)
chr2 (95-136)||(23086222-23086263)
[»] scaffold0162 (1 HSPs)
scaffold0162 (188-274)||(24138-24224)
[»] chr6 (20 HSPs)
chr6 (188-274)||(20410766-20410852)
chr6 (69-136)||(29266167-29266234)
chr6 (130-195)||(21683086-21683151)
chr6 (130-194)||(23658066-23658130)
chr6 (69-136)||(15816827-15816894)
chr6 (253-308)||(21686254-21686309)
chr6 (133-195)||(19825500-19825562)
chr6 (136-194)||(20410529-20410587)
chr6 (69-134)||(1589946-1590011)
chr6 (130-195)||(18982548-18982613)
chr6 (188-282)||(17856515-17856610)
chr6 (133-184)||(29045258-29045309)
chr6 (69-136)||(1639777-1639843)
chr6 (91-134)||(14995422-14995465)
chr6 (130-184)||(10446204-10446258)
chr6 (155-195)||(15998865-15998905)
chr6 (90-134)||(22347312-22347356)
chr6 (95-134)||(17026586-17026625)
chr6 (159-197)||(24506155-24506193)
chr6 (96-136)||(1585055-1585095)
[»] scaffold0203 (2 HSPs)
scaffold0203 (188-274)||(18196-18284)
scaffold0203 (130-195)||(17951-18016)
[»] scaffold0032 (1 HSPs)
scaffold0032 (188-274)||(62107-62195)
[»] scaffold0468 (1 HSPs)
scaffold0468 (188-287)||(11023-11123)
[»] scaffold1783 (1 HSPs)
scaffold1783 (69-136)||(1165-1232)
[»] scaffold0023 (1 HSPs)
scaffold0023 (69-136)||(105819-105886)
[»] scaffold0676 (1 HSPs)
scaffold0676 (130-195)||(2857-2922)
[»] scaffold0042 (2 HSPs)
scaffold0042 (75-136)||(67522-67583)
scaffold0042 (100-134)||(53659-53693)
[»] scaffold0338 (1 HSPs)
scaffold0338 (68-136)||(3010-3078)
[»] scaffold0117 (2 HSPs)
scaffold0117 (76-136)||(21666-21726)
scaffold0117 (69-136)||(34349-34416)
[»] scaffold0607 (1 HSPs)
scaffold0607 (73-136)||(3625-3688)
[»] scaffold0575 (1 HSPs)
scaffold0575 (69-136)||(9293-9360)
[»] scaffold0071 (1 HSPs)
scaffold0071 (69-136)||(51819-51886)
[»] scaffold0061 (2 HSPs)
scaffold0061 (133-195)||(14600-14662)
scaffold0061 (133-195)||(23658-23720)
[»] scaffold0594 (1 HSPs)
scaffold0594 (130-195)||(2223-2288)
[»] scaffold0414 (2 HSPs)
scaffold0414 (188-274)||(11416-11504)
scaffold0414 (130-180)||(11171-11221)
[»] scaffold0335 (1 HSPs)
scaffold0335 (69-129)||(1616-1677)
[»] scaffold0220 (1 HSPs)
scaffold0220 (130-195)||(13925-13990)
[»] scaffold0174 (3 HSPs)
scaffold0174 (130-195)||(11592-11657)
scaffold0174 (130-180)||(5445-5495)
scaffold0174 (132-184)||(19843-19895)
[»] scaffold0672 (1 HSPs)
scaffold0672 (76-136)||(7643-7703)
[»] scaffold0216 (1 HSPs)
scaffold0216 (76-136)||(22160-22220)
[»] scaffold0064 (1 HSPs)
scaffold0064 (76-136)||(68806-68866)
[»] scaffold0431 (1 HSPs)
scaffold0431 (130-194)||(5608-5674)
[»] scaffold0413 (1 HSPs)
scaffold0413 (69-136)||(11478-11545)
[»] scaffold0231 (2 HSPs)
scaffold0231 (132-195)||(17534-17597)
scaffold0231 (188-233)||(17777-17822)
[»] scaffold0247 (1 HSPs)
scaffold0247 (133-195)||(1052-1114)
[»] scaffold0004 (3 HSPs)
scaffold0004 (130-195)||(66083-66148)
scaffold0004 (130-187)||(111344-111401)
scaffold0004 (130-184)||(75924-75978)
[»] scaffold0007 (2 HSPs)
scaffold0007 (139-195)||(16439-16495)
scaffold0007 (130-195)||(18712-18777)
[»] scaffold0505 (1 HSPs)
scaffold0505 (130-195)||(4912-4977)
[»] scaffold0183 (1 HSPs)
scaffold0183 (188-237)||(11120-11169)
[»] scaffold0086 (1 HSPs)
scaffold0086 (134-195)||(35201-35262)
[»] scaffold0017 (1 HSPs)
scaffold0017 (154-195)||(26703-26744)
[»] scaffold0014 (1 HSPs)
scaffold0014 (95-136)||(189550-189591)
[»] scaffold1256 (1 HSPs)
scaffold1256 (155-195)||(2236-2276)
[»] scaffold0213 (1 HSPs)
scaffold0213 (130-194)||(19184-19248)
[»] scaffold0106 (2 HSPs)
scaffold0106 (91-131)||(36909-36949)
scaffold0106 (91-134)||(29312-29355)
[»] scaffold0853 (1 HSPs)
scaffold0853 (130-173)||(2465-2508)
[»] scaffold0090 (1 HSPs)
scaffold0090 (95-134)||(31637-31676)
[»] scaffold0328 (1 HSPs)
scaffold0328 (130-195)||(18651-18717)
[»] scaffold0058 (1 HSPs)
scaffold0058 (159-197)||(59695-59733)
[»] scaffold1204 (1 HSPs)
scaffold1204 (188-237)||(148-197)
[»] scaffold0730 (1 HSPs)
scaffold0730 (131-184)||(6517-6570)
[»] scaffold0452 (1 HSPs)
scaffold0452 (188-237)||(2843-2892)
[»] scaffold0388 (1 HSPs)
scaffold0388 (95-136)||(15295-15336)
[»] scaffold0108 (1 HSPs)
scaffold0108 (133-194)||(6395-6456)
[»] scaffold0001 (1 HSPs)
scaffold0001 (96-136)||(152306-152346)
[»] scaffold1913 (1 HSPs)
scaffold1913 (95-134)||(656-695)
[»] scaffold0322 (1 HSPs)
scaffold0322 (95-134)||(20018-20057)
[»] scaffold0160 (1 HSPs)
scaffold0160 (95-134)||(15676-15715)
[»] scaffold0139 (1 HSPs)
scaffold0139 (132-195)||(23510-23573)
[»] scaffold0057 (1 HSPs)
scaffold0057 (91-134)||(1390-1433)
[»] scaffold0008 (1 HSPs)
scaffold0008 (69-136)||(11575-11642)
[»] scaffold0379 (1 HSPs)
scaffold0379 (134-184)||(10935-10984)
[»] scaffold0371 (2 HSPs)
scaffold0371 (102-136)||(8344-8378)
scaffold0371 (161-194)||(10487-10520)
[»] scaffold0031 (1 HSPs)
scaffold0031 (130-184)||(127354-127408)
[»] scaffold0021 (2 HSPs)
scaffold0021 (159-197)||(17080-17118)
scaffold0021 (159-197)||(26611-26649)
[»] scaffold0819 (1 HSPs)
scaffold0819 (154-195)||(5228-5269)
[»] scaffold0234 (1 HSPs)
scaffold0234 (103-136)||(26183-26216)
[»] scaffold0562 (1 HSPs)
scaffold0562 (98-134)||(3055-3091)
[»] scaffold0130 (1 HSPs)
scaffold0130 (95-131)||(2055-2091)
[»] scaffold0035 (1 HSPs)
scaffold0035 (130-194)||(43798-43860)


Alignment Details
Target: scaffold0180 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 68 - 308
Target Start/End: Complemental strand, 10698 - 10459
Alignment:
Q  68 tatcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattct 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10698 tatcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaagat-ggttgtataattct 10600  T
Q  168 gaaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||    
T  10599 gaaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggcgaagtataa 10500  T
Q  268 tgttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10499 tgttgttgttgatgaattcacttctgattgttcttgttttt 10459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 69 - 308
Target Start/End: Complemental strand, 487 - 248
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  487 atcataggtataattatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaagatgggttgtataattctg 388  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  387 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataat 288  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  287 gttgttgttgatgaattcacttctgattgttgttgttttt 248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 38184862 - 38185101
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  38184862 atcataggtacaatcatatagcaatgctgtagacagttttgaggattgaattgggaaaaattgggactagctttctctaaagatgggttgtataattctg 38184961  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  38184962 aaaaagggtttaacattgtagttattgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataat 38185061  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  38185062 gttgttgttgatgaattcacttctgattgttgttgttttt 38185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 173 - 308
Target Start/End: Original strand, 20494554 - 20494689
Alignment:
Q  173 agggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttg 272  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| |||    
T  20494554 agggtttaacattgtagttgttgatgataaatttacatgctcaagttatgtatatatgtaaacttgtgtttttgctcaaaattggtgaagtataatattg 20494653  T
Q  273 ttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||| ||||||||    
T  20494654 ttgttgatgaattcacttctgattgttgttgttttt 20494689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 21514487 - 21514367
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| |    
T  21514487 agttgttgatgatgaaattatatgctcaagttatgtatatatgtatacttgtgttttttctcaaaattggtgaagtataatgttgttgttgatgaattta 21514388  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  21514387 cttctgattgttgttgttttt 21514367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 22366186 - 22366072
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||   |||||||||||||||||    
T  22366186 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataa---tgttgttgatgaattca 22366090  T
Q  288 cttctgattgttcttgtt 305  Q
    |||||||||||| |||||    
T  22366089 cttctgattgttgttgtt 22366072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 22723368 - 22723251
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||   |||| |||||||||||||||    
T  22723368 agttgttgatgatgaatttacatgcttaagttatgtatatatgtatacttgtgtttttgctcaaaattgatgaagtattttgttattgttgatgaattca 22723269  T
Q  288 cttctgattgttcttgtt 305  Q
    |||||||||||| |||||    
T  22723268 cttctgattgtttttgtt 22723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 18023564 - 18023653
Alignment:
Q  127 aattgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaa 216  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18023564 aattgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaa 18023653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 4380865 - 4380951
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  4380865 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattcgtgaagtattatgttgtt 4380951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 18816551 - 18816624
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaa 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18816551 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattgttgaa 18816624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 18816306 - 18816371
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18816306 tgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 18816371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 22208310 - 22208246
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  22208310 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 22208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 18023647 - 18023710
Alignment:
Q  245 tgctcaacattggtgaagtagaatgttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18023647 tgctcaaaattggtgaagtataatgttgttgttgatgaattcacttctgattgttattgttttt 18023710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 22483827 - 22483763
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||    
T  22483827 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgtt 22483763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 36732426 - 36732488
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  36732426 gactagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttg 36732488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 15635261 - 15635322
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaa-ttgggaaaaat 129  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15635261 atcataggtgtaatcatatagcaatgctgtaatcagttttggggattgaatttgggaaaaat 15635322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 21860706 - 21860767
Alignment:
Q  75 ggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||||    
T  21860706 ggtataatcatatagcaatgttgtaatcagttttggggattgaattggggaaaatttggact 21860767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 24907986 - 24907914
Alignment:
Q  215 aagttatgtatatatgt--atacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaatt 285  Q
    |||||||||||||||||  |||||||||||||| ||||| |||| ||||||| ||||||||||||||||||||    
T  24907986 aagttatgtatatatgtgtatacttgtgttttttctcaaaattgatgaagtataatgttgttgttgatgaatt 24907914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 21514732 - 21514667
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||| ||||||||| |||  ||||||||||||| |||||||||||||| ||||||||||||    
T  21514732 tgggactagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttg 21514667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 4380628 - 4380693
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| ||||||||||   |  |||||||||||||||||||||||||||| ||||||||||||    
T  4380628 tgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgttg 4380693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 22920142 - 22920203
Alignment:
Q  72 ataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggg 133  Q
    ||||||| ||||||||| || || ||||| |||||||||||||||||||||| |||||||||    
T  22920142 ataggtagaatcatataacattgttgtaatcagttttggggattgaattggggaaaattggg 22920203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 22258320 - 22258384
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||||||| |||  ||||||||||||  |||||||||||||| ||| ||||||||||    
T  22258320 gactagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgat 22258384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 22483978 - 22483914
Alignment:
Q  131 gggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||| |||||||||| |||  ||||||||||||| |||||||||||||||| || |||||||    
T  22483978 gggactaactttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttg 22483914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 20387372 - 20387306
Alignment:
Q  70 tcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||| | |||| |||| || | |||||| |||||||||||||||||||||| ||||||||||||    
T  20387372 tcataggaagaatcttataacacttctgtaatcagttttggggattgaattggggaaaattgggact 20387306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 21399758 - 21399704
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  21399758 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 21399704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 21794251 - 21794197
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  21794251 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 21794197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 22345205 - 22345151
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| |||| ||||| |||||||||||    
T  22345205 tgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacat 22345151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 22356865 - 22356811
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| |||| ||||| |||||||||||    
T  22356865 tgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacat 22356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 22617496 - 22617455
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  22617496 ctgtaatcagttttggggattgaattggggaaaattgggact 22617455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 21676511 - 21676576
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||| |||||| ||| |||| ||||||| ||||| |||||||||| ||||||||||||||    
T  21676511 tgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgat 21676576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 21676604 - 21676669
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||| |||||| ||| |||| ||||||| ||||| |||||||||| ||||||||||||||    
T  21676604 tgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgat 21676669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 21678857 - 21678922
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||| |||||| ||| |||| ||||||| ||||| |||||||||| ||||||||||||||    
T  21678857 tgggactagctt-ctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgat 21678922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 24239805 - 24239756
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||| ||||||||||| ||||||||||||  ||||| |||||||||||||    
T  24239805 agttcttgatgatgaaattacatgctcaatatatgtttatatgtatactt 24239756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 12577920 - 12577869
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaac 182  Q
    |||||||| |||||||||| ||| | ||||||||||| |||||||||||||||    
T  12577920 tgggactaactttctctaataatag-ttgtataattccgaaaaagggtttaac 12577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 2247816 - 2248055
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2247816 atcatagatataatcatatagcgatgttgtaaacaattttggggattgaattgggaaaaattgggactagctttctctaaagatgggttgtataattctg 2247915  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||    
T  2247916 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgcatacttatgtttttgctcaaaattggtgaagtataat 2248015  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  2248016 gttgttgttgatgaattcacttctgattgttgttgttttt 2248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 24546996 - 24546876
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||||||||||||||||||||    
T  24546996 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtattgttgcccaaaattggtgaagtataatgttgttgttgatgaattca 24546897  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  24546896 cttctgattgttgttgttttt 24546876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 24549207 - 24549325
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||||| ||||||||||||||||||||||    
T  24549207 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtattcttgcccaaaattggtgaagtataatgttgttgttgatgaattca 24549306  T
Q  288 cttctgattgttcttgttt 306  Q
    ||||| |||||| ||||||    
T  24549307 cttcttattgttgttgttt 24549325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 25104036 - 25104148
Alignment:
Q  193 ttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattcacttct 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| || ||||||||||||||||||||||||| |    
T  25104036 ttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtatttttgctcaaaattgatgaactataatgttgttgttgatgaattcacttat 25104135  T
Q  293 gattgttcttgtt 305  Q
    ||||||| |||||    
T  25104136 gattgttattgtt 25104148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 17208320 - 17208234
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  17208320 agttgttgatgatgattttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 17208234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 14520242 - 14520156
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  14520242 agttgttgatgatgaatttatatgcttaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaaatatgatgttgtt 14520156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 1988306 - 1988364
Alignment:
Q  74 aggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgg 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1988306 aggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgg 1988364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 45803342 - 45803407
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || |||||||    
T  45803342 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttg 45803407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 22841290 - 22841344
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22841290 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaacat 22841344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 14641559 - 14641624
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||| ||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||    
T  14641559 tgggattagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttg 14641624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 17208565 - 17208500
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||| |||||| ||||||||||||    
T  17208565 tgggactagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttg 17208500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 29907680 - 29907615
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| | | ||||||||||||||||||||||||||||| ||||||||||||    
T  29907680 tgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttg 29907615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 29948846 - 29948781
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| | | ||||||||||||||||||||||||||||| ||||||||||||    
T  29948846 tgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttg 29948781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 29998000 - 29997935
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| | | ||||||||||||||||||||||||||||| ||||||||||||    
T  29998000 tgggactagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttg 29997935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 14152410 - 14152474
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||||||||| |||||||||||    
T  14152410 tgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgtt 14152474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 14520487 - 14520422
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| ||| |||||||||||||| ||||| |||||||| ||||||||||||    
T  14520487 tgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttg 14520422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 5215684 - 5215627
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagtt 191  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||||| ||||||||    
T  5215684 actagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagtt 5215627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 12917317 - 12917382
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| |||||||||| ||| |||||||| ||||| |||||||||||||||| || |||||||    
T  12917317 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttg 12917382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 15566785 - 15566721
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| ||||||||||   |  |||||||||||||||||||||||||||| |||||||||||    
T  15566785 tgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 15566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 17669709 - 17669763
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  17669709 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 17669763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 54875485 - 54875539
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  54875485 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 54875539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 11325238 - 11325279
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  11325238 ctgtaatcagttttggggattgaattggggaaaattgggact 11325279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 13837000 - 13836959
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  13837000 ctgtaatcagttttggggattgaattggggaaaattgggact 13836959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 17758665 - 17758714
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  17758665 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 17758714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 19059985 - 19060034
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  19059985 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 19060034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 10722 - 10684
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  10722 tgtaaacagttttggggattgaattggggaaaatgggga 10684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 3527168 - 3527222
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||| | |||| |||||||||||    
T  3527168 tgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaacat 3527222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 6156751 - 6156698
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  6156751 tgggactagctttctctaataatgggttgtatgattct-aaaaggggtttaacat 6156698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 15233053 - 15233012
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| | |||||||||||||||||||| ||||||||||||    
T  15233053 ctgtaatctgttttggggattgaattggggaaaattgggact 15233012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 15238921 - 15238880
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| | |||||||||||||||||||| ||||||||||||    
T  15238921 ctgtaatctgttttggggattgaattggggaaaattgggact 15238880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 40038987 - 40039036
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||| ||||  ||||| |||||||||||||    
T  40038987 agttgttgatgatgaaattacatgttcaatatatgtttatatgtatactt 40039036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 8927736 - 8927788
Alignment:
Q  82 tcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||| || || ||||| |||||||| ||||||||||||| ||||||||||    
T  8927736 tcatataacattgttgtaatcagttttgaggattgaattggggaaaattggga 8927788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 831800 - 832038
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||     
T  831800 atcataggtataatcatatagcaatgctgtaaaaagttttggggattgaattgggaaaaattgggactagttttctctaaagatgggttgtacaattcta 831899  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||    
T  831900 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaatgggtgaagtataat 831998  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  831999 gttgttgttgatgaattcacttctgattgttgttgttttt 832038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 1196980 - 1197218
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||||||     
T  1196980 atcataggtataatcatatagcaatgctgtaaaaagttttggggattgaattgggaaaaattgggactagttttctctaaagatgggttgtacaattcta 1197079  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||    
T  1197080 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaatgggtgaagtataat 1197178  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  1197179 gttgttgttgatgaattcacttctgattgttgttgttttt 1197218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 69 - 308
Target Start/End: Complemental strand, 34958447 - 34958208
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  34958447 atcatatgtataatcatatagcaatgctgtaaacagttttggggattaaattgggaaaaattgggactagctttctctaaagatgagttgtataattctg 34958348  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||    
T  34958347 aaaaaggatttaacattgtagttgttgatgatgaatttacatgctcaagttagatatatatgtatacttgtgtttttgctcaaaattggtgaagtataat 34958248  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  34958247 gttgttgttgatgaattcacttttgattgttgttgttttt 34958208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 4690917 - 4691037
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  4690917 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtatttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 4691016  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  4691017 cttctgattgttgttgttttt 4691037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 47095248 - 47095128
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  47095248 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 47095149  T
Q  288 cttctgattgttcttgttttt 308  Q
    ||||| |||||| ||||||||    
T  47095148 cttctaattgttgttgttttt 47095128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 18079554 - 18079671
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||||    
T  18079554 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaaatataatgttattgttgatgaattca 18079653  T
Q  288 cttctgattgttcttgtt 305  Q
    |||||||||||| |||||    
T  18079654 cttctgattgttgttgtt 18079671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 43745452 - 43745332
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  43745452 agttgttgatgatgaatttatatggtcaagttatgtatatatgtatacttgagtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 43745353  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  43745352 cttctgattgttgttgttttt 43745332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 20252446 - 20252529
Alignment:
Q  191 tgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  20252446 tgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 20252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 15575905 - 15575991
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  15575905 agttgttgatgatgaatttatctgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattcgtgaagtatgatgttgtt 15575991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 18874922 - 18875003
Alignment:
Q  193 ttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||    
T  18874922 ttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtatttttgctcaaaattggtgaagtatgatgttgtt 18875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 37727007 - 37727074
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  37727007 atcataggtataatcatatagcaatgttgtaaacagttttggggattgaattggaaaaaattgggact 37727074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 14153047 - 14153108
Alignment:
Q  75 ggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  14153047 ggtataatcatatagcaatgctgtaatcagttttggggattgaattggggaaaattgggact 14153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 708440 - 708502
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttg 192  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||    
T  708440 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttg 708502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 20252195 - 20252257
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  20252195 ggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgtt 20252257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 15575660 - 15575725
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  15575660 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttg 15575725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 42042053 - 42041987
Alignment:
Q  70 tcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||    
T  42042053 tcataagtataatcatatagcaatgttgtaatcagttttggggattgaattagggaaaattgggact 42041987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 43745697 - 43745632
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  ||||||||||| |||||||||||||||| ||||||||||||    
T  43745697 tgggactagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttg 43745632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 47095493 - 47095428
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| |||||||| ||||||||||||    
T  47095493 tgggactagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttg 47095428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 8513764 - 8513828
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||    
T  8513764 tgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 38299789 - 38299738
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaa 181  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  38299789 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 48212984 - 48213089
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||| |||||||||               ||||| |||| ||||||| ||||||||||||||||||||||    
T  48212984 agttgttgatgatgaatttatatgctcaagttatatatatatgt---------------ctcaaaattgatgaagtataatgttgttgttgatgaattca 48213068  T
Q  288 cttctgattgttcttgttttt 308  Q
    ||||| |||||| ||||||||    
T  48213069 cttctaattgttgttgttttt 48213089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 15726215 - 15726150
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||||||||||||| || || || ||||| |||||||||||||||||||||| ||||||||||    
T  15726215 atcataggtataatcatgtaacattgttgtaatcagttttggggattgaattggggaaaattggga 15726150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 19195652 - 19195588
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||||||||||| ||||||||||||    
T  19195652 tgggactagctttctctaataatgagttgtataattctg-aaaagggtttaaccttgtagttgttg 19195588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 8488105 - 8488169
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||||| || ||||||||    
T  8488105 tgggactaactttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtt 8488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 18874679 - 18874740
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaa--gggtttaacattgtagttg 192  Q
    |||||||||||||||| ||| ||||||||||||||||||||  ||||||||| |||||||||    
T  18874679 gactagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgtagttg 18874740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 4690674 - 4690738
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| ||||||||||   |  |||||||||||||||||||||||||||| |||||||||||    
T  4690674 tgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 4690738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 43276755 - 43276818
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| |||||||||| ||| ||||||||||||||| |||| |||||||| |||||||||||    
T  43276755 tgggactaactttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgtt 43276818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 12201275 - 12201314
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  12201275 ctgtaatcagttttggggattgaattgggaaaaattggga 12201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 58424 - 58478
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  58424 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 58478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 16250233 - 16250287
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||| |||||||||| |||  ||||||||||| ||||||||||||||||||    
T  16250233 tgggactaactttctctaataatgagttgtataattttgaaaaagggtttaacat 16250287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 33556116 - 33556170
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  33556116 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 33556170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 19070053 - 19070012
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatat 229  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  19070053 agttgttgatgatgaaattacatgctcaagttatatatatat 19070012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 19283094 - 19283030
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaa--gggtttaacattgtagttgttg 195  Q
    ||||| |||||||||| ||| ||||||||||||||||||||  ||||||||||| || |||||||    
T  19283094 gactaactttctctaagaatgggttgtataattctgaaaaagggggtttaacatggttgttgttg 19283030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 12207881 - 12207921
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  12207881 tgtaatcagttttggggattgaattggggaaaattgggact 12207921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 1613417 - 1613378
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  1613417 ctgtaaactgttttggggattgaattgggaaaaatgggga 1613378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 3287782 - 3287743
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaa 172  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  3287782 gactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 13315096 - 13315147
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||| |||||||||| ||| |||||||| |||||||||| |||||||||||    
T  13315096 gactatctttctctaataatgggttgtatgattctgaaaaggggtttaacat 13315147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 25943308 - 25943253
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacatt 185  Q
    ||||||||||||||||||| ||| ||||||||  || |||||| ||||||||||||    
T  25943308 tgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatt 25943253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 36300655 - 36300706
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  36300655 gactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 36300706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 13744521 - 13744575
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||| ||| ||||| |||| |||||||||||    
T  13744521 tgggactagctttctctaataatgggttttatgattctaaaaaggggtttaacat 13744575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 15700897 - 15700951
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgt 187  Q
    |||||||||||||||| |||  ||||||| ||||| |||| ||||||||||||||    
T  15700897 gactagctttctctaataatgagttgtatgattctaaaaaggggtttaacattgt 15700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 15720820 - 15720766
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||| | ||| |||||||| ||||| |||| |||||||||||    
T  15720820 tgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaacat 15720766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 42565872 - 42565910
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgat 42565910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 285
Target Start/End: Original strand, 3192149 - 3192230
Alignment:
Q  205 ttacatgctcaagttatgtatatatgtatac-ttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaatt 285  Q
    ||||||||||||| | ||| ||||||||||| |||||||||   |||| |||| ||||  | ||||||||||||||||||||    
T  3192149 ttacatgctcaagatgtgtgtatatgtatactttgtgttttcattcaaaattgatgaaaaataatgttgttgttgatgaatt 3192230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 7529989 - 7529952
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgg 132  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  7529989 ctgtaatcagttttggggattgaattggggaaaattgg 7529952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 15700750 - 15700810
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| ||||||||  |||| |||| |||||||||| |||||||||||    
T  15700750 actagctttctctaataatgggttgtatggttctaaaaaggggtttaaca-tgtagttgttg 15700810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 16383874 - 16383825
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||| | |||||||||||||    
T  16383874 agttgttgatgatgaaattacatgctcaatatatttttatatgtatactt 16383825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 39995046 - 39995087
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| || ||||||||||||||||||| ||||||||||||    
T  39995046 ctgtaatcaattttggggattgaattggggaaaattgggact 39995087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 48212741 - 48212805
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaa--gggtttaacattgtagttgttg 195  Q
    ||||||||||||| || ||| |||||||| ||||| |||||  ||||||||||||||| ||||||    
T  48212741 gactagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttg 48212805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 15731066 - 15731106
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  15731066 tgtaatcagttttgggaattgaattggggaaaattgggact 15731106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 69 - 308
Target Start/End: Complemental strand, 17143124 - 17142888
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||    
T  17143124 atcataggtataatcatatagcaatgctgtaaatagttttggggattgaattgggaaaaattgggaatagctttctctaaagatgagttgtataattctg 17143025  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||     
T  17143024 aaaaggggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataa- 17142926  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
      ||||||||||||| ||||||||||||||| ||||||||    
T  17142925 --tgttgttgatgaactcacttctgattgttgttgttttt 17142888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 15747723 - 15747961
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggactagctttctctaaaaattggttgtataattctg 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||  ||||||||||||||    
T  15747723 atcataggtataatcatatagcaatgctgtaaacagttttggggattaaattgggaaaaattgagactaactttctctaaagatgagttgtataattctg 15747822  T
Q  169 aaaaagggtttaacattgtagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaat 268  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||    
T  15747823 aaaaagggtttaacattgtagttgttgatgatgaatatacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaattggtgaagtataat 15747921  T
Q  269 gttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    |||| ||||||||| |||||||||||||||| ||||||||    
T  15747922 gttgatgttgatgacttcacttctgattgttgttgttttt 15747961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 2424643 - 2424763
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  2424643 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 2424742  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  2424743 cttctgattgttattgttttt 2424763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 26446003 - 26445883
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  26446003 agttgttgatgatgaatttatattctcaagttatgtatataagtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 26445904  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  26445903 cttctgattgttgttgttttt 26445883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 14630933 - 14630814
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  14630933 agttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgctcaaaatttgtgaagtataatgttgttgttgatgaattca 14630834  T
Q  288 cttctgattgttcttgtttt 307  Q
    |||||||| ||| |||||||    
T  14630833 cttctgatcgttgttgtttt 14630814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 188 - 285
Target Start/End: Original strand, 10237326 - 10237423
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaatt 285  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| ||||||    
T  10237326 agttgttgatgaagaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattgatgaagtataatgttattgttggtgaatt 10237423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 16025917 - 16025993
Alignment:
Q  231 tatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattcacttctgattgttcttgtttt 307  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  16025917 tatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattcacttctaattgttgttgtttt 16025993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 14035629 - 14035562
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14035629 atcataggtataatcatatagcaatgttgtaaacagttttggggattgaattgagaaaaattgggact 14035562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 25513892 - 25513827
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  25513892 tgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttg 25513827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 14631173 - 14631111
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  14631173 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 14631111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 9639051 - 9638984
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||||||||||| ||||||||||||||    
T  9639051 tgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgat 9638984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 14049483 - 14049425
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  14049483 gtataatcatatagcaatgctgtaatcagttttggggattgaattgtggaaaattggga 14049425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 16296979 - 16296914
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||| | ||||||||||    
T  16296979 tgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttg 16296914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 30147817 - 30147760
Alignment:
Q  79 taatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  30147817 taatcatatagcaatgatgtaatcagttttggggattgaattggggaaaattgggact 30147760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33186941 - 33186880
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||    
T  33186941 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgtt 33186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 35660997 - 35660932
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  35660997 tgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttg 35660932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 12424301 - 12424367
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctg--aaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| |||||||||||||||  |||||||||||||| |||||||||||    
T  12424301 tgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgtt 12424367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 25513710 - 25513655
Alignment:
Q  253 attggtgaagtagaatgttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  25513710 attggtgaagtataatgttgttgttgatgaattcacttctgattgatgttgttttt 25513655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 26446246 - 26446183
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||||||  ||||||||||||    
T  26446246 ggactagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttg 26446183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 13899044 - 13899087
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  13899044 aatgttgtaaacagttttggggattgaattggggaaaattggga 13899087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 15213681 - 15213730
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  15213681 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 15213730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 54363351 - 54363400
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  54363351 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 54363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 16370912 - 16370952
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  16370912 tgtaatcagttttggggattgaattggggaaaattgggact 16370952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 9622530 - 9622476
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||| | ||||| |||| |||||||||||    
T  9622530 tgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaacat 9622476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 10273424 - 10273370
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||| ||||||    
T  10273424 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtataacat 10273370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 13847239 - 13847193
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggttt 179  Q
    |||||||||||||||| ||| |||||||||||||| ||||| |||||    
T  13847239 gactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 55583237 - 55583183
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||| | |||| |||||||||||    
T  55583237 tgggactagctttctctaataatgggttgtatgattataaaaaggggtttaacat 55583183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 15239830 - 15239879
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaac 182  Q
    |||||||||||||||| |||   |||||||| ||||||||||||||||||    
T  15239830 gactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 19622239 - 19622288
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    ||||||| |||||||| ||||||||||||  ||||| |||||||||||||    
T  19622239 agttgttaatgatgaaattacatgctcaatatatgtttatatgtatactt 19622288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 3863479 - 3863515
Alignment:
Q  98 taaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||||||||||||||||||||| |||| |||||    
T  3863479 taaacagttttggggattgaattggggaaaactggga 3863515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 3872236 - 3872272
Alignment:
Q  98 taaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||||||||||||||||||||| |||| |||||    
T  3872236 taaacagttttggggattgaattggggaaaactggga 3872272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 305
Target Start/End: Original strand, 10237422 - 10237454
Alignment:
Q  273 ttgttgatgaattcacttctgattgttcttgtt 305  Q
    ||||||||||||||||||||||||||| |||||    
T  10237422 ttgttgatgaattcacttctgattgttgttgtt 10237454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 32490596 - 32490564
Alignment:
Q  104 gttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||| ||||||||||||    
T  32490596 gttttggggattgaattggggaaaattgggact 32490564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 18744677 - 18744558
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18744677 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 18744578  T
Q  288 cttctgattgttcttgtttt 307  Q
    |||||||||||| |||||||    
T  18744577 cttctgattgttgttgtttt 18744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 1627324 - 1627444
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  1627324 agttgttgatgatgaatttatatgctcaagttatctatatatgtatacttgtgtttttgctcaaaattgatgaagtataatgttgttgttgatgaattca 1627423  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  1627424 cttctgattgttgttgttttt 1627444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 660586 - 660469
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||   ||||||||||||||| |    
T  660586 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattgatgaagtataa---tgttgttgatgaattaa 660490  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  660489 cttctgattgttgttgttttt 660469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 23199463 - 23199549
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||  ||||||||    
T  23199463 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgcatttttgctcaaaattggtgaagtatgatgttgtt 23199549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 6766644 - 6766577
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||    
T  6766644 atcataggtataatcatatagcaatgctgcaatcagttttggggattgaattggggaaaattgagact 6766577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 18744915 - 18744851
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  18744915 tgggactaactttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 18744851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 23199218 - 23199282
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  23199218 tgggactagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgtt 23199282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 17813362 - 17813303
Alignment:
Q  75 ggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  17813362 ggtataatcatatagcaatgttgtaatcagttttggggattgaattggggaaaattggga 17813303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 16063792 - 16063727
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||    
T  16063792 tgggactacctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttg 16063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 24276664 - 24276731
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||| |||||||| ||||| || ||||| |||||||||||| ||||||||||||||||||||||    
T  24276664 atcataggcataatcatgtagcattgttgtaatcagttttggggaatgaattgggaaaaattgggact 24276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 24385549 - 24385482
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||| |||||||| ||||| || ||||| |||||||||||| ||||||||||||||||||||||    
T  24385549 atcataggcataatcatgtagcattgttgtaatcagttttggggaatgaattgggaaaaattgggact 24385482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 660829 - 660766
Alignment:
Q  131 gggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||| ||  |||||||||||||||||||| |||||||| ||||||||||||    
T  660829 gggactagctttctctaataaggggttgtataattctgaaaaa-ggtttaaccttgtagttgttg 660766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 7786042 - 7786001
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  7786042 ctgtaatcagttttggggattgaattgggaaaaattgggact 7786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 6551326 - 6551366
Alignment:
Q  155 gttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  6551326 gttgtataattctgaaaaagggtttaaccttgtagttgttg 6551366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 32607327 - 32607381
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  32607327 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 32607381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 26754336 - 26754293
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  26754336 aatgttgtaaacagttttggggatcgaattgggaaaatttggga 26754293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 21980233 - 21980299
Alignment:
Q  70 tcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||| | |||| |||| || | |||||| || ||||||||||||||||||| ||||||||||||    
T  21980233 tcataggcagaatcttataacactcctgtaatcaattttggggattgaattggggaaaattgggact 21980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 31622013 - 31621963
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||| |||||||||| |||||||||||| ||||| |||| |||||||||||    
T  31622013 actatctttctctaataattggttgtatgattctaaaaatgggtttaacat 31621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 21553580 - 21553621
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||| ||| ||||||||||||    
T  21553580 ctgtaatcagttttggggattgaatcggggaaaattgggact 21553621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 28476990 - 28477110
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  28476990 agttgttgatgatgaatttatatgctcaagttatgtatatatgtataattgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaattca 28477089  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| ||||||||    
T  28477090 cttctgattgttgttgttttt 28477110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 20822819 - 20822729
Alignment:
Q  195 gatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaatt 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  20822819 gatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatgaatt 20822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 188 - 285
Target Start/End: Complemental strand, 20836630 - 20836533
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaatt 285  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  20836630 agttcttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtagaatgtggttgtttatgaatt 20836533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 24719766 - 24719852
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  24719766 agttgttgatgatgaatttatatgttcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 24719852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 21180444 - 21180511
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  21180444 atcataggtataatcatatagcaatgctgtaatcagttttggggaatgaattgggaaaaattgggact 21180511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 24960772 - 24960705
Alignment:
Q  68 tatcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  24960772 tatcataggtataatcatatagcaatgctgtaatcagttttggggattgaattggg-aaaattgggact 24960705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 13227768 - 13227708
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  13227768 gtataatcatatagcaatgctgtaatcagttttggggattgaattggggaaaattgggact 13227708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 24719523 - 24719585
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  24719523 ggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 24719585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 50544910 - 50544848
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  50544910 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 50544848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 12710680 - 12710623
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgttttt 245  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  12710680 agttgttgatgatgaatttacatattcaagttatgtatatatgtatacttgtgttttt 12710623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 38056683 - 38056748
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  38056683 tgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 38056748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 12710908 - 12710843
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||||||  ||||||||||||    
T  12710908 tgggactagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttg 12710843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 22145677 - 22145742
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| |||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||    
T  22145677 tgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttg 22145742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 28476745 - 28476810
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||| ||||||||| |||  |||||||||||||||||||||||||||| ||||||||||||    
T  28476745 tgggactagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttg 28476810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 29535956 - 29535896
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||    
T  29535956 gtataatcatatagcaatgctgtaatcatttttggggatcgaattggggaaaattgggact 29535896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 17901808 - 17901859
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17901808 gactagctttctctaataatgggttgtataattctgaaaaagggtttaacat 17901859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 6834213 - 6834152
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||||||| || |||||||    
T  6834213 actagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttg 6834152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 8276003 - 8276067
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||| ||||| |||  || ||||||||||||||||||||||||| ||||||||||||||    
T  8276003 gactagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttgat 8276067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 8306647 - 8306593
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||    
T  8306647 tgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacat 8306593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 14801273 - 14801211
Alignment:
Q  70 tcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgg 132  Q
    ||||||| ||||||||||| || | |||||| |||||||||||||||||||||| ||||||||    
T  14801273 tcataggcataatcatataacacttctgtaatcagttttggggattgaattggggaaaattgg 14801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 14810147 - 14810085
Alignment:
Q  70 tcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgg 132  Q
    ||||||| ||||||||||| || | |||||| |||||||||||||||||||||| ||||||||    
T  14810147 tcataggcataatcatataacacttctgtaatcagttttggggattgaattggggaaaattgg 14810085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 635018 - 635064
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggttt 179  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||    
T  635018 gactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 35895138 - 35895086
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||    
T  35895138 ggactagctttatctaataatgggttgtatgattctgaaaaaggttttaacat 35895086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 34392806 - 34392755
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  34392806 gactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 34392755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 24007236 - 24007301
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaa-cattgtagttgttg 195  Q
    ||||||||||||||||| | ||| | |||||||||||||||||| ||||||| | ||||||||||||    
T  24007236 tgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaacctttgtagttgttg 24007301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 39061333 - 39061295
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  39061333 tataattctgaaaaaaggtttaaccttgtagttgttgat 39061295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 41931308 - 41931354
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtata 234  Q
    |||||||||||||||| ||||||| ||||||||| ||||||| ||||    
T  41931308 agttgttgatgatgaaattacatgttcaagttatatatatatatata 41931354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 1818 - 1699
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  1818 agttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgctcaaaatttgtgaagtataatgttgttgttgatgaattca 1719  T
Q  288 cttctgattgttcttgtttt 307  Q
    |||||||| ||| |||||||    
T  1718 cttctgatcgttgttgtttt 1699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 2058 - 1996
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2058 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 1996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 15872 - 15991
Alignment:
Q  189 gttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattcac 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||| || ||| ||||||||||||||||    
T  15872 gttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttacttaaaattggtgaagtataacgttattgttgatgaattcac 15971  T
Q  289 ttctgattgttcttgttttt 308  Q
    ||||||||||| ||||||||    
T  15972 ttctgattgttgttgttttt 15991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 195
Target Start/End: Original strand, 15637 - 15691
Alignment:
Q  141 ttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| ||| | |||||| ||||| |||||||||||||| ||||||||||||    
T  15637 ttctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttg 15691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 186450 - 186569
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  186450 agttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgctcaaaatttgtgaagtataatgttgttgttgatgaattca 186549  T
Q  288 cttctgattgttcttgtttt 307  Q
    |||||||| ||| |||||||    
T  186550 cttctgatcgttgttgtttt 186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 186210 - 186272
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  186210 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 186272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 3678 - 3798
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattca 287  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||    
T  3678 agttgttgaagatgaatttacatgcttaagttatgtatatatgtatacttgtgtttttgcttaaaattggtgaactataatgttgttgttgatgaattca 3777  T
Q  288 cttctgattgttcttgttttt 308  Q
    |||||||||||| || |||||    
T  3778 cttctgattgttgttattttt 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 3433 - 3498
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||||||||| ||||||||||||    
T  3433 tgggactagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttg 3498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 15974 - 15878
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| |||||||||||||||    
T  15974 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttactcaaaattgatgaagtataatattgttgttgatgaat 15878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 18313 - 18251
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18313 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 18251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 7578 - 7667
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgtt 277  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  7578 agttgttgatgatgaatttacatgttcaagttatgtgtatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgtt 7667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 5316 - 5381
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| ||||||||||   |  ||||||||||||| |||||||||||||| ||||||||||||    
T  5316 tgggactaactttctctaattttaagttgtataattcttaaaaagggtttaaccttgtagttgttg 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 9e-33; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 188 - 283
Target Start/End: Complemental strand, 29114559 - 29114464
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaa 283  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||| || |||||| |||||||||||    
T  29114559 agttgttgatgatgaatttacatgctcaagttatgtataaatgtatacttgtgtttttactcaaaattggtgaaatataatgttattgttgatgaa 29114464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 21315734 - 21315820
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  21315734 agttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 21315820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 21369088 - 21369002
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  21369088 agttgttgttgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 21369002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 21335524 - 21335610
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||  ||||||||    
T  21335524 agttgttgatgatgaatttatatgctcaagttatgtatatatatatacttgtgtttttgcacaaaattggtgaagtatgatgttgtt 21335610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 23610414 - 23610356
Alignment:
Q  190 ttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgct 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23610414 ttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgct 23610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 21315487 - 21315551
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  21315487 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 21315551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 21335277 - 21335341
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  21335277 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 21335341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 21369334 - 21369273
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagtt 191  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  21369334 tgggacaagctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtt 21369273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 38929209 - 38929252
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38929209 aatgctgtaaacagttttggggattgaattgggaaaaattggga 38929252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 23610667 - 23610602
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||| || |||||||||    
T  23610667 tgggactagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttg 23610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 25652085 - 25652045
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  25652085 tgtaatcagttttggggattgaattgggaaaaattgggact 25652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 23801537 - 23801483
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  23801537 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 23801483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 24161139 - 24161099
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  24161139 tgtaatcagttttggggattgaattggaaaaaattgggact 24161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 34491276 - 34491316
Alignment:
Q  155 gttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  34491276 gttgtataattctgaaaaagggtttaacatggttgttgttg 34491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 23086263 - 23086222
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||| ||||| ||||||    
T  23086263 ctgtaatcagttttggggattgaattggggaaaatagggact 23086222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 24138 - 24224
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  24138 agttcttgatgatgaattcatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 24224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 20410766 - 20410852
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||  ||||||||    
T  20410766 agttgttgatgatgaatttatatgctcgagttatgtatataagtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 20410852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 29266234 - 29266167
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29266234 atcataggtataatcatatagcaatgctgtaatcagttttggggattgaattggggaaaattgggact 29266167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 21683086 - 21683151
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  21683086 tgggactagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttg 21683151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 23658130 - 23658066
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  23658130 tgggactagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgtt 23658066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 15816827 - 15816894
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||| ||||||    
T  15816827 atcataggtataattatatagcaatgctgtaatcagttttggcgattgaattggggaaaatagggact 15816894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 21686254 - 21686309
Alignment:
Q  253 attggtgaagtagaatgttgttgttgatgaattcacttctgattgttcttgttttt 308  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21686254 attggtgaagtataatgttgttgttgatgaattcacttctgattgttgttgttttt 21686309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 19825500 - 19825562
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||| |||||||||||||||| |||||| ||||||||||||    
T  19825500 gactagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttg 19825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 20410529 - 20410587
Alignment:
Q  136 tagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||||| |||||||||||    
T  20410529 tagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgtt 20410587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 1589946 - 1590011
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||||||||||||| || || || ||||| |||||||||||||||||||||| ||||||||||    
T  1589946 atcataggtataatcatgtaacattgttgtaatcagttttggggattgaattggggaaaattggga 1590011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 18982613 - 18982548
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||| || |||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  18982613 tgggattaactttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 18982548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 17856515 - 17856610
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatac-ttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatga 282  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||| | | || |||| ||||  |  ||||||||||||||||    
T  17856515 agttgttgatgatgaaattacatgctcaagatgtgtatatatgtatactttgtgttttcgtttaaaattgatgaaaaattatgttgttgttgatga 17856610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 29045309 - 29045258
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  29045309 gactagctttctctaataatgggttgtataattttgaaaaagggtttaacat 29045258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 1639843 - 1639777
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||| ||| |||||||||| || ||||| |||||||||| ||||||||||| ||||||||||||    
T  1639843 atcataggcatagtcatatagcattgttgtaatcagttttggg-attgaattggggaaaattgggact 1639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 14995422 - 14995465
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
T  14995422 aatgttgtaaacagttttggggtttgaattgggaaaaattggga 14995465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 10446258 - 10446204
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  10446258 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacat 10446204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 15998905 - 15998865
Alignment:
Q  155 gttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  15998905 gttgtataattctgaaaaagagtttaaccttgtagttgttg 15998865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 22347356 - 22347312
Alignment:
Q  90 caatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  22347356 caatactgtaaacagttttggggattgaattggggaaaatgggga 22347312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 17026586 - 17026625
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  17026586 ctgtaaactgttttggggattgaattgggaaaaatgggga 17026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 24506155 - 24506193
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgat 24506193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 1585095 - 1585055
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||| ||||||||||| ||||||||||||    
T  1585095 tgtaatcagttttgggaattgaattggggaaaattgggact 1585055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 18196 - 18284
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtata--tatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  18196 agttgttgatgatgaatttatatgctcaagttatgtatatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 18284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 17951 - 18016
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||| ||||||||||   |  ||||||||||||||||||||| |||||| ||||||||||||    
T  17951 tgggactaactttctctaattctaagttgtataattctgaaaaaggatttaaccttgtagttgttg 18016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 62107 - 62195
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtata--tatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  62107 agttgttgatgatgaatttatatgctcaagttatgtatatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 62195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 188 - 287
Target Start/End: Original strand, 11023 - 11123
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatac-ttgtgtttttgctcaacattggtgaagtagaatgttgttgttgatgaattc 286  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||  ||||| |||| |||| || |||||||||||||||||||||    
T  11023 agttgttgatgatgaaattacatgctcaagatgtgtatatatgtatactttgtgttttcactcaaaattgatgaaatataatgttgttgttgatgaattc 11122  T
Q  287 a 287  Q
    |    
T  11123 a 11123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 1232 - 1165
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  1232 atcataggtataatcatatagcaatgttgtaatcagttttggggattgaattggggaaaattgggact 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 105886 - 105819
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  105886 atcataggtataatcatatagcaatgttgtaatcagttttggggattgaattggggaaaattgggact 105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 2922 - 2857
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2922 tgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 2857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 67583 - 67522
Alignment:
Q  75 ggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  67583 ggtataatcatatagcaatgctgtaatcagttttggggattgaattggggaaaattgggact 67522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 134
Target Start/End: Complemental strand, 53693 - 53659
Alignment:
Q  100 aacagttttggggattgaattgggaaaaattggga 134  Q
    ||||| |||||||||||||||||||||||||||||    
T  53693 aacaggtttggggattgaattgggaaaaattggga 53659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 3010 - 3078
Alignment:
Q  68 tatcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||    
T  3010 tatcatagttataatcatatagcaatgttgtaatcagttttggggattgaattgaggaaaattgggact 3078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 21726 - 21666
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  21726 gtataatcatatagcaatgctgtaatcagttttggggattgaatttgggaaaattgggact 21666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34416 - 34349
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||| || ||||| |||||||||||| ||||||||| ||||||||||||    
T  34416 atcataggtataatcatatagcattgttgtaatcagttttggggaatgaattggggaaaattgggact 34349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 3688 - 3625
Alignment:
Q  73 taggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  3688 taggtataattatatagcaatgctgtaatcagctttggggattgaattggggaaaattgggact 3625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 9360 - 9293
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||    
T  9360 atcatatgtataatcatatagcaatgttgtaatcagttttggggattgaattggggacaattgggact 9293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 51886 - 51819
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||    
T  51886 atcataggtataatcatataacaatgttgtaatcagttttggggattgaattggggaaaattaggact 51819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 14600 - 14662
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||    
T  14600 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttg 14662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 23658 - 23720
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||    
T  23658 gactagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttg 23720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 2288 - 2223
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| || |||||||    
T  2288 tgggactagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttg 2223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 11416 - 11504
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatg--tatatatgtatacttgtgtttttgctcaacattggtgaagtagaatgttgtt 274  Q
    |||||||||||||||| ||| ||| ||||||||||  ||||||||||||||||| ||||||||||| |||||| |||||  ||||||||    
T  11416 agttgttgatgatgaacttatatgttcaagttatgcatatatatgtatacttgtatttttgctcaaaattggtcaagtatgatgttgtt 11504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 11171 - 11221
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggttta 180  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||| |||||||    
T  11171 tgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 1677 - 1616
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaa-ttgggaaaaat 129  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1677 atcataggtgtaatcatatagcaatgctgtaatcagttttggggattgaatttgggaaaaat 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 13990 - 13925
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||| ||||||||    
T  13990 tgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttg 13925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 11657 - 11592
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  11657 tgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttg 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 5495 - 5445
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggttta 180  Q
    |||||||| |||||||||| |||  ||||||||||||||||||||||||||    
T  5495 tgggactacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 19895 - 19843
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||| ||||||||| ||| |||||||| ||||| |||| |||||||||||    
T  19895 ggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacat 19843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 7643 - 7703
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  7643 gtataatcatatagcaatgctgtaaccagttttggggattgaattgaggaaagttgggact 7703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 22220 - 22160
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||    
T  22220 gtataatcatataacaatgctgtaatcagttttggggattgaattggagaaaattgggact 22160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 68866 - 68806
Alignment:
Q  76 gtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| ||||    
T  68866 gtataatcatatagcaatgttgtaatcagttttggggattgaattggggaaaattgagact 68806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 5674 - 5608
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctga--aaaagggtttaacattgtagttgtt 194  Q
    ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||| |||||||||||    
T  5674 tgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgtt 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 11545 - 11478
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||| |||||||||||||| |||| ||| ||||||| |||| ||||||||||||||||||||||    
T  11545 atcataggcataatcatatagcattgctataatcagtttttgggaatgaattgggaaaaattgggact 11478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 17534 - 17597
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||| ||||| ||| | ||||||||||||||||||||||||||| ||||||||||||    
T  17534 ggactagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttg 17597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 17777 - 17822
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtat 233  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  17777 agttgttgatgatgaatttatatgctcaagttatgtatatatgtat 17822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 1114 - 1052
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||| |||||    
T  1114 gactagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttg 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 66083 - 66148
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||| || |||||||    
T  66083 tgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatggttgttgttg 66148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 111401 - 111344
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgt 187  Q
    |||| |||||||||||||| ||| |||||||| ||||| |||| ||||||||||||||    
T  111401 tggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 75978 - 75924
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    |||||||||||||||| || ||| |||||||| ||||| |||| |||||||||||    
T  75978 tgggactagctttctccaataatgggttgtatgattctaaaaaggggtttaacat 75924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 16439 - 16495
Alignment:
Q  139 ctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  16439 ctttatctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 16495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 18712 - 18777
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||| || |||||||||| |||  ||||||||||||| ||||| |||||| | ||||||||||||    
T  18712 tgggattaactttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttg 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 195
Target Start/End: Complemental strand, 4977 - 4912
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaa-cattgtagttgttg 195  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| | ||||||||||||    
T  4977 tgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaacctttgtagttgttg 4912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 11169 - 11120
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  11169 agttgttgatgatgaaattacatgctcaagatgtgtatatatgtatactt 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 35201 - 35262
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||| |||| ||| |||||||||||||| |||||||||||||||| || |||||||    
T  35201 actagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttg 35262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 26744 - 26703
Alignment:
Q  154 ggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  26744 ggttgtataattctgaaaaagggtttaactttgtagttgttg 26703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 189591 - 189550
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  189591 ctgtaatcagttttggggattgaattgggaaaaattgggact 189550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 2236 - 2276
Alignment:
Q  155 gttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  2236 gttgtataattctgaaaaagggtttaaccttgtagttgttg 2276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 19248 - 19184
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||| ||||||||||   |  |||||||||||||||||||||||||||| |||||||||||    
T  19248 tgggactaactttctctaattctaagttgtataattctgaaaaagggtttaaccttgtagttgtt 19184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 36949 - 36909
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattg 131  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  36949 aatgctgtaaacagttttggggattgaattggggaaaattg 36909  T

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Target: scaffold0106; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 29355 - 29312
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    ||||||||||||||||||||||||||||||| | ||||||||||    
T  29355 aatgctgtaaacagttttggggattgaattgaggaaaattggga 29312  T

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Target: scaffold0853 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 2465 - 2508
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaa 173  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  2465 tgggactagctttctctaataatgggttgtataattctgaaaaa 2508  T

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Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 31637 - 31676
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  31637 ctgtaatcagttttggggattgaattgggaaaaattggga 31676  T

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Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 18651 - 18717
Alignment:
Q  130 tgggactagctttctctaaaaattggttgta-taattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||||| |||  |||||| ||||| ||||||| |||||||| ||||||||||||    
T  18651 tgggactagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttg 18717  T

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Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 59695 - 59733
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  59695 tataattctgaaaaagggtttaactttgtagttgttgat 59733  T

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Target: scaffold1204 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 148 - 197
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  148 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 197  T

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Target: scaffold0730 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 6517 - 6570
Alignment:
Q  131 gggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||| |||||||||| ||| |||||||| |||||||||| |||||||||||    
T  6517 gggactacctttctctaataatgggttgtatgattctgaaaaggggtttaacat 6570  T

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Target: scaffold0452 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 2843 - 2892
Alignment:
Q  188 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatactt 237  Q
    |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  2843 agttgttgatgatgaaattacatgctcaatatatgtttatatgtatactt 2892  T

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Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 15295 - 15336
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  15295 ctgtaatcagttttggggattgaattggggaaaattgggact 15336  T

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Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 6456 - 6395
Alignment:
Q  133 gactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||||||||||| |||  ||||| |||||||||||||||| ||||  |||||||||||    
T  6456 gactagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagttgtt 6395  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 152306 - 152346
Alignment:
Q  96 tgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  152306 tgtaatcagttttggggattgaattggggaaaattgggact 152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1913 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1913
Description:

Target: scaffold1913; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 695 - 656
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  695 ctgtaaactgttttggggattgaattgggaaaaatgggga 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 20057 - 20018
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  20057 ctgtaaactgttttggggattgaattgggaaaaatgggga 20018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Complemental strand, 15715 - 15676
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  15715 ctgtaaactgttttggggattgaattgggaaaaatgggga 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 23573 - 23510
Alignment:
Q  132 ggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    ||||||||||||||||| ||| |||||||||| ||| |||| ||||| ||| ||| ||||||||    
T  23573 ggactagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttg 23510  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 1390 - 1433
Alignment:
Q  91 aatgctgtaaacagttttggggattgaattgggaaaaattggga 134  Q
    |||| |||||||||||||||| ||||||||||| ||||||||||    
T  1390 aatgttgtaaacagttttgggtattgaattggggaaaattggga 1433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 11575 - 11642
Alignment:
Q  69 atcataggtataatcatatagcaatgctgtaaacagttttggggattgaattgggaaaaattgggact 136  Q
    |||||| || |||||||||| ||||||| ||| || |||||||||||||||| || |||| |||||||    
T  11575 atcatatgtgtaatcatataacaatgctataatcaattttggggattgaatttgggaaaaatgggact 11642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 10984 - 10935
Alignment:
Q  134 actagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||| ||| |||||||| ||||| ||||||||||||||||    
T  10984 actagctttctctaataatgggttgtatgattct-aaaaagggtttaacat 10935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 8378 - 8344
Alignment:
Q  102 cagttttggggattgaattgggaaaaattgggact 136  Q
    |||||||||||||||||||||| ||||||||||||    
T  8378 cagttttggggattgaattggggaaaattgggact 8344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 10487 - 10520
Alignment:
Q  161 taattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||| |||||||||||||||||||||||||||||    
T  10487 taatcctgaaaaagggtttaacattgtagttgtt 10520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 127354 - 127408
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacat 184  Q
    ||||||||||||||||||| ||| | |||||| ||||| |||| |||||||||||    
T  127354 tgggactagctttctctaataatggattgtatgattctaaaaaggggtttaacat 127408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 17118 - 17080
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17118 tataattcttaaaaagggtttaactttgtagttgttgat 17080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 26649 - 26611
Alignment:
Q  159 tataattctgaaaaagggtttaacattgtagttgttgat 197  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  26649 tataattcttaaaaagggtttaactttgtagttgttgat 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 5269 - 5228
Alignment:
Q  154 ggttgtataattctgaaaaagggtttaacattgtagttgttg 195  Q
    |||||||||||||||||| |||||||||||| || |||||||    
T  5269 ggttgtataattctgaaacagggtttaacatggttgttgttg 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 26183 - 26216
Alignment:
Q  103 agttttggggattgaattgggaaaaattgggact 136  Q
    ||||||||||||||||||||| ||||||||||||    
T  26183 agttttggggattgaattggggaaaattgggact 26216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 3055 - 3091
Alignment:
Q  98 taaacagttttggggattgaattgggaaaaattggga 134  Q
    |||||||||||||||||||||||||| |||| |||||    
T  3055 taaacagttttggggattgaattggggaaaactggga 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 2055 - 2091
Alignment:
Q  95 ctgtaaacagttttggggattgaattgggaaaaattg 131  Q
    |||||| |||||||||||||||||||||| |||||||    
T  2055 ctgtaatcagttttggggattgaattggggaaaattg 2091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 43798 - 43860
Alignment:
Q  130 tgggactagctttctctaaaaattggttgtataattctgaaaaagggtttaacattgtagttgtt 194  Q
    |||||||||||| |||||| ||| |||| ||||||||||||| |||||||||||| || ||||||    
T  43798 tgggactagctt-ctctaataatgggtt-tataattctgaaatagggtttaacatggttgttgtt 43860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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