View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13850_high_14 (Length: 383)
Name: NF13850_high_14
Description: NF13850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13850_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 14 - 365
Target Start/End: Original strand, 41084759 - 41085110
Alignment:
| Q |
14 |
ttcttaggggttaatgtgacaattactgttaactgtatacacaaaataaaattaactaagagcttaattttattaataaataaacagtagttattcctag |
113 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
41084759 |
ttcttacgggttaatgtgacaattactgttaactgtatacacaaaatgaaattaactaagagcttaattttattagtaaataaacagtagttattcctag |
41084858 |
T |
|
| Q |
114 |
aacattcactcttgcaagagtttctgattgatttcatagtgaaattcaaggaatgaattgattgtcacacatggcaggaattaattaggacaaacacact |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41084859 |
aacattcactcttgcaagagtttctgattgatttcatagtgaaattcaaggaatgaattgattgtcacacatggcaggaattaattaggacaaacacact |
41084958 |
T |
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| Q |
214 |
tgtatcagtaaatcactttttatgttgaagttaaagtcttggtattactcatcctgattaccataaactgagaattcaattatgnnnnnnntgagagagc |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41084959 |
tgtatcagtaaatcactttttatgttgaagttaaagtcttggtattactcatcctgattaccataaactgagaattcaattatgaaaaaaatgagagagc |
41085058 |
T |
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| Q |
314 |
acacaaaattgataatttcctttgttaatctcactaaaatccatcttgcaat |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
41085059 |
acacaaaattgataatttcctttgttaatctcactaaactccatcttgcaat |
41085110 |
T |
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