View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13851_high_11 (Length: 337)
Name: NF13851_high_11
Description: NF13851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13851_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 2882347 - 2882655
Alignment:
| Q |
1 |
caagtgtaaagttcataaggtaatttcaagaaggaaaagcaagttccaaacagatgagatttaagtgcagaatgacacctgtagtcatatgtgaaaggag |
100 |
Q |
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| T |
2882347 |
caagtgtaaagttcataaggtaatgtcaagaaggaaaaggtagttccaaacagatgagatttaagtgcagaatgacacctgtagtcatatgtgaaaggag |
2882446 |
T |
|
| Q |
101 |
tacgacgcacatgataataattccaaactgtctccaacaaaagtatctaaatatgagagaacaccatctgtgattcaatggatttcagtaaaaagttgca |
200 |
Q |
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| T |
2882447 |
tgcgaggcacatgataataattccaaactgtctccaacaaaagtatctaaatatgagagaacaccatctgtgattcaatggatttcagtaaaaagttgca |
2882546 |
T |
|
| Q |
201 |
catggtttaatcaggtttctctctaactttaaatagaagggtaaaaaagataagttcacatgattaaatgaaaataaactggcattcatatgaagaaaga |
300 |
Q |
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| T |
2882547 |
catggtttaatcaggtttctc--------taaatagaagggtaaaaaataaatgttcacatgattaaatgaaaataaactggcattcatatgaagaaaga |
2882638 |
T |
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| Q |
301 |
gtattaaaaggaaggttc |
318 |
Q |
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||| | |||||||||||| |
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| T |
2882639 |
gtact-aaaggaaggttc |
2882655 |
T |
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