View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13855_low_4 (Length: 277)
Name: NF13855_low_4
Description: NF13855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13855_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 13 - 259
Target Start/End: Complemental strand, 7524559 - 7524313
Alignment:
| Q |
13 |
atacttctgttaatatagctccttggattttgacagttggtgcttcgacgattgatagagagtttcctgctgatgttgttcttggtgatggtagagtttt |
112 |
Q |
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| T |
7524559 |
atacttctgttaatatagctccttggattttgacagttggtgcttcgacgattgatagagagtttcctgctgatgttgttcttggtgatggtagagtttt |
7524460 |
T |
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| Q |
113 |
tggtggtgtttctttgtattatggtgatagtttacctgataataaacttcctttgatttatggtgctgattgtggtagtagatattgttatttagggtct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7524459 |
tggtggtgtttctttgtattatggtgatagtttacctgataataaacttcctttgatttatggtgctgattgtggtagtagatattgttatttagggtct |
7524360 |
T |
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| Q |
213 |
ttagattcttcaaaagttcaagggaagattgttgtttgtgatagggg |
259 |
Q |
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| T |
7524359 |
ttagattcttcaaaagttcaagggaagattgttgtttgtgatagggg |
7524313 |
T |
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