View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13856_low_29 (Length: 213)
Name: NF13856_low_29
Description: NF13856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13856_low_29 |
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Alignment Details
Target: chr3 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 30918641 - 30918461
Alignment:
| Q |
15 |
atataaaggcaatcagatctaatcactagcacgtaatttggttgaagcaataacacaaacaccttgtgaacattataaaaataattgagaataagtaata |
114 |
Q |
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| T |
30918641 |
atataaaggcaatcagatctaatcactagcacgtaatttggttgaagcaataacacaaacaccttgtgaacattataaaaataattgagaataagtaata |
30918542 |
T |
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| Q |
115 |
gcacgtaatgtagataaattaattaagctaaaagagttaaaaagaaacctgaagaattgagggtttgacgaatgagaaagc |
195 |
Q |
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| T |
30918541 |
gcacgtaatgtagattaattaattaagctaaaagagttaaaaagaaacctgaagaattgagggtttgacgaatgagaaagc |
30918461 |
T |
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