View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13860_low_25 (Length: 343)

Name: NF13860_low_25
Description: NF13860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13860_low_25
NF13860_low_25
[»] chr3 (69 HSPs)
chr3 (2-325)||(14570653-14570985)
chr3 (4-325)||(15953960-15954280)
chr3 (118-325)||(15933955-15934161)
chr3 (159-234)||(12203286-12203361)
chr3 (10-201)||(11643937-11644129)
chr3 (10-203)||(17497039-17497232)
chr3 (117-234)||(29551840-29551958)
chr3 (4-226)||(12275114-12275340)
chr3 (118-234)||(46070237-46070354)
chr3 (123-194)||(12536869-12536940)
chr3 (10-183)||(15519328-15519501)
chr3 (122-234)||(9690594-9690707)
chr3 (123-192)||(12153829-12153898)
chr3 (117-203)||(13692888-13692975)
chr3 (117-222)||(20376381-20376487)
chr3 (117-203)||(2498200-2498287)
chr3 (122-184)||(11963325-11963388)
chr3 (117-183)||(54090912-54090979)
chr3 (117-184)||(49164073-49164142)
chr3 (122-203)||(54832366-54832448)
chr3 (117-188)||(10596825-10596897)
chr3 (10-62)||(12355292-12355344)
chr3 (10-62)||(12361791-12361843)
chr3 (118-190)||(16822942-16823014)
chr3 (122-184)||(11955771-11955834)
chr3 (122-184)||(12724306-12724369)
chr3 (218-325)||(13036002-13036106)
chr3 (117-183)||(18718297-18718364)
chr3 (117-188)||(18756107-18756178)
chr3 (118-192)||(20188707-20188782)
chr3 (117-191)||(28759775-28759850)
chr3 (122-183)||(15375557-15375619)
chr3 (122-183)||(16330791-16330853)
chr3 (218-252)||(16822870-16822904)
chr3 (122-183)||(16834143-16834205)
chr3 (10-56)||(17197849-17197895)
chr3 (10-56)||(17198315-17198361)
chr3 (117-182)||(18961867-18961932)
chr3 (122-183)||(27034026-27034087)
chr3 (117-188)||(8373089-8373161)
chr3 (10-62)||(12478966-12479018)
chr3 (117-184)||(30596036-30596104)
chr3 (117-188)||(32387190-32387262)
chr3 (118-192)||(11849588-11849663)
chr3 (20-67)||(11849713-11849760)
chr3 (117-183)||(12256529-12256596)
chr3 (20-67)||(13667203-13667250)
chr3 (117-191)||(21353092-21353167)
chr3 (117-203)||(50655164-50655251)
chr3 (122-184)||(51854278-51854341)
chr3 (122-184)||(53570407-53570470)
chr3 (122-183)||(6926795-6926857)
chr3 (118-226)||(11304875-11304985)
chr3 (232-266)||(12201293-12201327)
chr3 (4-62)||(12960660-12960718)
chr3 (118-234)||(14288128-14288245)
chr3 (117-203)||(14844321-14844407)
chr3 (122-191)||(16413450-16413520)
chr3 (117-183)||(12960548-12960616)
chr3 (4-73)||(13036233-13036302)
chr3 (10-55)||(18135607-18135652)
chr3 (122-182)||(19343444-19343505)
chr3 (4-112)||(24283660-24283769)
chr3 (164-192)||(11889254-11889282)
chr3 (10-50)||(11964210-11964250)
chr3 (10-50)||(12724431-12724471)
chr3 (4-64)||(15934215-15934275)
chr3 (10-50)||(18718420-18718460)
chr3 (16-56)||(18961777-18961817)
[»] chr8 (55 HSPs)
chr8 (4-316)||(20007095-20007416)
chr8 (10-186)||(14593885-14594062)
chr8 (4-190)||(20004842-20005028)
chr8 (117-226)||(20258104-20258214)
chr8 (117-226)||(21044734-21044844)
chr8 (10-268)||(20838989-20839247)
chr8 (4-325)||(21685068-21685399)
chr8 (4-325)||(21689417-21689748)
chr8 (118-201)||(19860482-19860566)
chr8 (117-203)||(16265988-16266075)
chr8 (117-186)||(21682835-21682904)
chr8 (4-85)||(19987429-19987511)
chr8 (10-201)||(36444881-36445073)
chr8 (131-203)||(14564435-14564507)
chr8 (131-203)||(14567968-14568040)
chr8 (162-225)||(20773176-20773240)
chr8 (162-225)||(20782970-20783034)
chr8 (4-190)||(22744563-22744748)
chr8 (117-203)||(23223817-23223904)
chr8 (117-183)||(43688312-43688379)
chr8 (119-203)||(3223802-3223887)
chr8 (10-62)||(20258258-20258310)
chr8 (10-62)||(21044888-21044940)
chr8 (117-183)||(11391746-11391813)
chr8 (117-183)||(14745658-14745725)
chr8 (117-190)||(23654335-23654409)
chr8 (117-222)||(27364223-27364328)
chr8 (122-183)||(29304768-29304830)
chr8 (10-56)||(29329023-29329069)
chr8 (101-203)||(27346574-27346674)
chr8 (117-184)||(7003208-7003276)
chr8 (96-183)||(19297425-19297511)
chr8 (117-184)||(26485153-26485221)
chr8 (117-184)||(40143479-40143547)
chr8 (117-191)||(9204482-9204557)
chr8 (117-183)||(10955825-10955892)
chr8 (10-45)||(20773345-20773380)
chr8 (10-45)||(20783139-20783174)
chr8 (117-183)||(31411650-31411717)
chr8 (117-183)||(31417832-31417899)
chr8 (10-56)||(1264896-1264942)
chr8 (232-266)||(9272232-9272266)
chr8 (20-62)||(21682949-21682991)
chr8 (70-190)||(25623794-25623914)
chr8 (122-183)||(27890813-27890874)
chr8 (122-183)||(27897146-27897207)
chr8 (122-183)||(27903052-27903113)
chr8 (122-183)||(27949471-27949532)
chr8 (122-183)||(29298213-29298275)
chr8 (122-183)||(29329124-29329186)
chr8 (122-186)||(4519865-4519930)
chr8 (122-186)||(22459027-22459092)
chr8 (131-191)||(16886429-16886489)
chr8 (10-58)||(19860385-19860433)
chr8 (159-203)||(35541965-35542009)
[»] scaffold0001 (4 HSPs)
scaffold0001 (4-325)||(448656-448987)
scaffold0001 (122-203)||(179918-179999)
scaffold0001 (117-184)||(511753-511821)
scaffold0001 (10-73)||(96712-96775)
[»] chr7 (85 HSPs)
chr7 (10-325)||(13318551-13318870)
chr7 (4-325)||(15436556-15436887)
chr7 (10-234)||(14168637-14168861)
chr7 (10-234)||(14172884-14173108)
chr7 (10-297)||(81121-81408)
chr7 (118-266)||(15097019-15097166)
chr7 (118-248)||(15103410-15103542)
chr7 (4-190)||(45186296-45186482)
chr7 (117-225)||(15085067-15085175)
chr7 (118-234)||(12555403-12555519)
chr7 (10-203)||(14580675-14580868)
chr7 (123-203)||(11854538-11854618)
chr7 (122-230)||(3328762-3328871)
chr7 (123-203)||(10520753-10520833)
chr7 (117-219)||(33405576-33405679)
chr7 (123-188)||(32772392-32772457)
chr7 (118-190)||(15143174-15143246)
chr7 (118-190)||(16475265-16475337)
chr7 (117-203)||(11340665-11340752)
chr7 (117-188)||(18956015-18956086)
chr7 (122-184)||(30270964-30271027)
chr7 (117-184)||(12454985-12455053)
chr7 (117-203)||(5186403-5186490)
chr7 (7-62)||(12429684-12429739)
chr7 (117-188)||(16951369-16951440)
chr7 (117-203)||(18436351-18436438)
chr7 (4-62)||(3328653-3328711)
chr7 (122-183)||(16843050-16843112)
chr7 (218-325)||(45186520-45186626)
chr7 (218-266)||(12800665-12800714)
chr7 (10-67)||(15103593-15103650)
chr7 (120-183)||(6412794-6412858)
chr7 (131-191)||(11298870-11298930)
chr7 (131-191)||(11307234-11307294)
chr7 (117-184)||(12462441-12462509)
chr7 (117-183)||(13020631-13020698)
chr7 (117-183)||(13026838-13026905)
chr7 (218-295)||(16069512-16069590)
chr7 (118-192)||(17467381-17467456)
chr7 (118-192)||(17585758-17585833)
chr7 (117-191)||(26089123-26089198)
chr7 (117-191)||(26112928-26113003)
chr7 (117-191)||(26119545-26119620)
chr7 (117-183)||(26288917-26288983)
chr7 (117-203)||(30602021-30602108)
chr7 (118-192)||(37380861-37380936)
chr7 (117-183)||(750768-750834)
chr7 (218-325)||(16073048-16073154)
chr7 (117-183)||(40683942-40684008)
chr7 (122-183)||(46175250-46175312)
chr7 (117-183)||(48987101-48987167)
chr7 (117-186)||(2309-2378)
chr7 (10-67)||(15097217-15097274)
chr7 (118-182)||(46681329-46681394)
chr7 (117-205)||(49151512-49151601)
chr7 (117-205)||(49158202-49158291)
chr7 (10-62)||(12555305-12555357)
chr7 (10-62)||(16184712-16184764)
chr7 (117-188)||(19463600-19463672)
chr7 (117-184)||(37288391-37288459)
chr7 (131-183)||(46650643-46650695)
chr7 (117-183)||(2025403-2025470)
chr7 (7-50)||(13020532-13020575)
chr7 (20-67)||(37380764-37380811)
chr7 (11-50)||(46348022-46348061)
chr7 (148-190)||(16069629-16069671)
chr7 (117-182)||(23521905-23521971)
chr7 (118-203)||(40922081-40922167)
chr7 (83-144)||(12695528-12695588)
chr7 (130-183)||(14945109-14945162)
chr7 (214-325)||(15143270-15143382)
chr7 (130-183)||(15372702-15372755)
chr7 (117-182)||(37243446-37243511)
chr7 (122-186)||(42059483-42059548)
chr7 (10-67)||(46681445-46681502)
chr7 (117-184)||(2387759-2387827)
chr7 (131-191)||(4281121-4281181)
chr7 (20-56)||(12462355-12462391)
chr7 (10-50)||(13026742-13026782)
chr7 (117-184)||(13452979-13453047)
chr7 (117-184)||(21758218-21758286)
chr7 (10-62)||(35961990-35962042)
chr7 (10-42)||(42059382-42059414)
chr7 (170-210)||(46626004-46626044)
chr7 (131-203)||(49159703-49159775)
[»] scaffold0924 (1 HSPs)
scaffold0924 (4-307)||(3099-3412)
[»] scaffold0261 (1 HSPs)
scaffold0261 (22-266)||(8324-8577)
[»] chr4 (60 HSPs)
chr4 (10-325)||(18272130-18272454)
chr4 (118-247)||(10783366-10783496)
chr4 (124-234)||(15359920-15360031)
chr4 (118-247)||(10972017-10972147)
chr4 (10-234)||(17177210-17177434)
chr4 (123-234)||(16228216-16228327)
chr4 (123-203)||(53904473-53904553)
chr4 (4-203)||(30239881-30240079)
chr4 (122-203)||(33222220-33222302)
chr4 (4-62)||(10783542-10783600)
chr4 (4-190)||(15004273-15004458)
chr4 (118-190)||(14991765-14991837)
chr4 (122-226)||(16485623-16485727)
chr4 (117-219)||(7360119-7360222)
chr4 (117-183)||(21882464-21882531)
chr4 (4-62)||(10972193-10972251)
chr4 (117-184)||(900467-900535)
chr4 (131-191)||(16157792-16157852)
chr4 (117-184)||(42221303-42221371)
chr4 (117-188)||(49051918-49051990)
chr4 (117-183)||(14063677-14063744)
chr4 (122-184)||(30397027-30397090)
chr4 (133-191)||(19127475-19127533)
chr4 (122-183)||(33097972-33098034)
chr4 (92-183)||(13480151-13480241)
chr4 (222-325)||(14991620-14991723)
chr4 (117-192)||(18165424-18165500)
chr4 (117-203)||(3259114-3259201)
chr4 (117-183)||(37882369-37882435)
chr4 (117-219)||(52501422-52501525)
chr4 (117-183)||(3265763-3265829)
chr4 (4-62)||(15325733-15325791)
chr4 (122-203)||(29381886-29381968)
chr4 (117-183)||(49239988-49240054)
chr4 (117-183)||(49748702-49748768)
chr4 (117-191)||(50083092-50083166)
chr4 (218-255)||(15004198-15004235)
chr4 (117-205)||(26396559-26396648)
chr4 (159-203)||(5939841-5939885)
chr4 (10-50)||(13454594-13454634)
chr4 (96-183)||(45958885-45958971)
chr4 (96-183)||(54825316-54825402)
chr4 (118-188)||(13454691-13454762)
chr4 (4-67)||(16485505-16485568)
chr4 (122-184)||(20890245-20890308)
chr4 (117-183)||(23435122-23435189)
chr4 (117-234)||(39265350-39265469)
chr4 (232-266)||(634812-634846)
chr4 (118-183)||(11938045-11938111)
chr4 (10-43)||(20890143-20890176)
chr4 (10-43)||(20895770-20895803)
chr4 (130-183)||(26076910-26076963)
chr4 (10-43)||(31665826-31665859)
chr4 (10-43)||(42955317-42955350)
chr4 (117-184)||(1584781-1584849)
chr4 (117-180)||(15325835-15325899)
chr4 (10-62)||(16999420-16999472)
chr4 (10-58)||(18165548-18165596)
chr4 (10-50)||(42221208-42221248)
chr4 (10-50)||(47870326-47870366)
[»] scaffold0661 (1 HSPs)
scaffold0661 (4-265)||(3111-3382)
[»] scaffold0149 (1 HSPs)
scaffold0149 (4-325)||(13957-14278)
[»] scaffold0516 (2 HSPs)
scaffold0516 (118-325)||(7111-7326)
scaffold0516 (12-63)||(7015-7066)
[»] scaffold0102 (4 HSPs)
scaffold0102 (118-266)||(30780-30927)
scaffold0102 (123-256)||(45450-45593)
scaffold0102 (4-67)||(30667-30730)
scaffold0102 (159-203)||(11451-11495)
[»] chr5 (61 HSPs)
chr5 (4-190)||(25014415-25014601)
chr5 (4-184)||(23443370-23443550)
chr5 (122-234)||(7772764-7772877)
chr5 (123-203)||(428158-428238)
chr5 (4-190)||(15193131-15193317)
chr5 (118-190)||(21889529-21889601)
chr5 (4-190)||(18819739-18819923)
chr5 (118-247)||(21830469-21830601)
chr5 (122-203)||(19363502-19363583)
chr5 (123-192)||(20844004-20844073)
chr5 (117-184)||(23544028-23544096)
chr5 (117-183)||(19799040-19799106)
chr5 (131-222)||(22501865-22501956)
chr5 (122-184)||(25420749-25420812)
chr5 (117-203)||(30781939-30782026)
chr5 (7-61)||(6403759-6403813)
chr5 (122-183)||(23075459-23075521)
chr5 (122-183)||(23081172-23081234)
chr5 (140-234)||(28259044-28259138)
chr5 (131-203)||(598148-598220)
chr5 (117-184)||(18567462-18567530)
chr5 (117-184)||(18940382-18940450)
chr5 (131-191)||(22006880-22006940)
chr5 (131-203)||(22508446-22508518)
chr5 (117-192)||(23560732-23560808)
chr5 (131-183)||(27635023-27635075)
chr5 (117-191)||(5455361-5455436)
chr5 (117-203)||(14881462-14881549)
chr5 (117-203)||(14888139-14888226)
chr5 (117-203)||(19509040-19509127)
chr5 (122-184)||(24058523-24058586)
chr5 (117-191)||(10687018-10687092)
chr5 (122-183)||(16774222-16774284)
chr5 (122-203)||(25847214-25847296)
chr5 (122-203)||(25853795-25853877)
chr5 (124-192)||(30344697-30344767)
chr5 (117-188)||(5337518-5337590)
chr5 (10-50)||(7772938-7772978)
chr5 (10-50)||(20991127-20991167)
chr5 (132-184)||(39608038-39608090)
chr5 (117-203)||(22247386-22247473)
chr5 (117-191)||(24008926-24009001)
chr5 (7-50)||(27635146-27635189)
chr5 (117-183)||(33536967-33537034)
chr5 (122-183)||(20991228-20991290)
chr5 (124-188)||(24668156-24668222)
chr5 (124-188)||(24736751-24736817)
chr5 (124-188)||(24737925-24737991)
chr5 (124-188)||(24750694-24750760)
chr5 (117-183)||(43029915-43029981)
chr5 (122-186)||(17938047-17938112)
chr5 (118-190)||(21495838-21495910)
chr5 (10-43)||(22501754-22501787)
chr5 (10-43)||(22508335-22508368)
chr5 (10-43)||(29745892-29745925)
chr5 (117-184)||(15462344-15462412)
chr5 (10-50)||(19801188-19801228)
chr5 (117-184)||(20341411-20341479)
chr5 (117-184)||(20348015-20348083)
chr5 (10-50)||(25420647-25420687)
chr5 (131-183)||(29745762-29745814)
[»] scaffold0193 (1 HSPs)
scaffold0193 (123-266)||(1981-2134)
[»] scaffold0017 (1 HSPs)
scaffold0017 (10-247)||(2039-2277)
[»] scaffold0402 (1 HSPs)
scaffold0402 (5-325)||(15785-16117)
[»] scaffold0205 (1 HSPs)
scaffold0205 (4-247)||(28098-28343)
[»] chr1 (52 HSPs)
chr1 (5-325)||(19336625-19336957)
chr1 (118-247)||(21699070-21699200)
chr1 (10-190)||(31926445-31926626)
chr1 (4-266)||(30490493-30490764)
chr1 (118-194)||(21409804-21409881)
chr1 (123-234)||(11140204-11140315)
chr1 (125-199)||(20850006-20850080)
chr1 (118-188)||(23713167-23713237)
chr1 (122-203)||(36615856-36615937)
chr1 (122-203)||(43089307-43089388)
chr1 (117-234)||(21921717-21921835)
chr1 (117-222)||(29601378-29601484)
chr1 (123-192)||(15315644-15315713)
chr1 (118-203)||(23634484-23634569)
chr1 (10-85)||(16882789-16882864)
chr1 (122-191)||(36918047-36918117)
chr1 (117-191)||(20076062-20076137)
chr1 (4-67)||(21409931-21409994)
chr1 (117-183)||(24080514-24080580)
chr1 (122-184)||(24237556-24237619)
chr1 (117-203)||(48428776-48428863)
chr1 (96-189)||(21963911-21964003)
chr1 (7-56)||(24108277-24108326)
chr1 (131-184)||(47485046-47485099)
chr1 (117-184)||(20293601-20293669)
chr1 (117-184)||(20300232-20300300)
chr1 (117-203)||(19045407-19045494)
chr1 (117-183)||(29553597-29553664)
chr1 (122-203)||(20396022-20396104)
chr1 (10-75)||(20849891-20849957)
chr1 (4-234)||(21733507-21733737)
chr1 (124-192)||(23194506-23194576)
chr1 (117-183)||(31534426-31534492)
chr1 (117-183)||(31563143-31563209)
chr1 (117-191)||(36211168-36211242)
chr1 (121-186)||(49328959-49329025)
chr1 (10-50)||(19860021-19860061)
chr1 (117-184)||(20571666-20571734)
chr1 (14-62)||(21665033-21665081)
chr1 (117-184)||(29150361-29150429)
chr1 (117-203)||(18419050-18419137)
chr1 (117-183)||(39188802-39188869)
chr1 (117-183)||(6741442-6741508)
chr1 (118-183)||(37676331-37676397)
chr1 (118-183)||(37683002-37683068)
chr1 (10-56)||(47484935-47484981)
chr1 (118-190)||(5381600-5381672)
chr1 (135-184)||(9292621-9292670)
chr1 (14-50)||(19853890-19853926)
chr1 (131-183)||(20837363-20837415)
chr1 (10-50)||(21735990-21736030)
chr1 (10-62)||(23065937-23065989)
[»] chr2 (33 HSPs)
chr2 (119-265)||(19036456-19036613)
chr2 (118-248)||(8889040-8889172)
chr2 (10-234)||(25106554-25106779)
chr2 (7-203)||(20648939-20649135)
chr2 (10-84)||(23753654-23753729)
chr2 (10-194)||(25268068-25268252)
chr2 (123-190)||(20913463-20913530)
chr2 (117-219)||(22012242-22012345)
chr2 (118-183)||(23291897-23291963)
chr2 (118-183)||(23333537-23333603)
chr2 (118-234)||(22860941-22861058)
chr2 (117-201)||(35243683-35243768)
chr2 (148-192)||(25174862-25174906)
chr2 (117-188)||(32910624-32910696)
chr2 (117-183)||(22812954-22813021)
chr2 (117-203)||(23887512-23887599)
chr2 (122-183)||(14564760-14564822)
chr2 (122-191)||(17582617-17582687)
chr2 (10-75)||(22860834-22860900)
chr2 (117-184)||(15642437-15642505)
chr2 (132-188)||(19648688-19648744)
chr2 (117-184)||(20851116-20851184)
chr2 (131-183)||(28970416-28970468)
chr2 (4-67)||(8889222-8889285)
chr2 (117-203)||(21605670-21605757)
chr2 (117-183)||(27038168-27038235)
chr2 (122-184)||(30195652-30195715)
chr2 (4-46)||(20724872-20724914)
chr2 (10-43)||(27272979-27273012)
chr2 (131-188)||(45029344-45029401)
chr2 (10-50)||(19648816-19648856)
chr2 (131-183)||(27366549-27366601)
chr2 (10-50)||(28970539-28970579)
[»] scaffold0555 (3 HSPs)
scaffold0555 (118-255)||(2348-2485)
scaffold0555 (117-191)||(96-171)
scaffold0555 (4-85)||(2234-2317)
[»] scaffold0025 (2 HSPs)
scaffold0025 (10-247)||(77584-77823)
scaffold0025 (131-183)||(72063-72115)
[»] scaffold0096 (1 HSPs)
scaffold0096 (123-234)||(3842-3953)
[»] scaffold1290 (2 HSPs)
scaffold1290 (4-190)||(401-587)
scaffold1290 (218-325)||(257-363)
[»] scaffold0434 (1 HSPs)
scaffold0434 (10-256)||(407-663)
[»] scaffold0326 (2 HSPs)
scaffold0326 (4-203)||(4510-4708)
scaffold0326 (4-203)||(19692-19890)
[»] chr6 (36 HSPs)
chr6 (132-234)||(18787060-18787162)
chr6 (4-255)||(22797586-22797837)
chr6 (123-266)||(24721566-24721707)
chr6 (117-234)||(10469844-10469962)
chr6 (117-234)||(13127392-13127510)
chr6 (118-190)||(18315109-18315181)
chr6 (122-222)||(23020487-23020588)
chr6 (117-183)||(14615432-14615499)
chr6 (10-191)||(19468689-19468870)
chr6 (118-226)||(23232522-23232631)
chr6 (117-183)||(27768281-27768348)
chr6 (131-192)||(10582547-10582608)
chr6 (5-62)||(14132299-14132356)
chr6 (131-234)||(1071601-1071705)
chr6 (117-188)||(13941354-13941426)
chr6 (117-191)||(24363488-24363563)
chr6 (117-191)||(24370079-24370154)
chr6 (117-183)||(29926618-29926685)
chr6 (218-286)||(18315003-18315070)
chr6 (117-183)||(25464764-25464830)
chr6 (117-183)||(19587731-19587799)
chr6 (83-144)||(23106131-23106191)
chr6 (10-50)||(23234199-23234239)
chr6 (118-192)||(5289070-5289145)
chr6 (132-183)||(14374519-14374570)
chr6 (117-203)||(15331258-15331345)
chr6 (117-203)||(17310588-17310675)
chr6 (10-45)||(17414861-17414896)
chr6 (122-183)||(17206903-17206964)
chr6 (4-62)||(19587844-19587902)
chr6 (12-62)||(19819742-19819792)
chr6 (117-186)||(26417809-26417879)
chr6 (117-183)||(33875876-33875942)
chr6 (122-186)||(34133120-34133185)
chr6 (20-56)||(13127558-13127594)
chr6 (131-183)||(24563440-24563492)
[»] scaffold0556 (1 HSPs)
scaffold0556 (13-230)||(4098-4315)
[»] scaffold0173 (1 HSPs)
scaffold0173 (130-234)||(2266-2370)
[»] scaffold0244 (2 HSPs)
scaffold0244 (83-190)||(731-837)
scaffold0244 (4-190)||(14461-14646)
[»] scaffold0310 (2 HSPs)
scaffold0310 (122-234)||(17002-17115)
scaffold0310 (10-50)||(16901-16941)
[»] scaffold0108 (1 HSPs)
scaffold0108 (4-266)||(46363-46629)
[»] scaffold0091 (2 HSPs)
scaffold0091 (118-266)||(21820-21978)
scaffold0091 (118-266)||(26017-26175)
[»] scaffold0011 (6 HSPs)
scaffold0011 (10-250)||(55847-56088)
scaffold0011 (10-85)||(187072-187148)
scaffold0011 (10-85)||(196699-196775)
scaffold0011 (10-85)||(147809-147885)
scaffold0011 (10-230)||(154996-155217)
scaffold0011 (133-230)||(147933-148030)
[»] scaffold0923 (1 HSPs)
scaffold0923 (117-203)||(785-872)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-203)||(13667-13866)
[»] scaffold0331 (1 HSPs)
scaffold0331 (123-234)||(19465-19576)
[»] scaffold0022 (5 HSPs)
scaffold0022 (117-226)||(37773-37884)
scaffold0022 (117-226)||(135834-135945)
scaffold0022 (96-188)||(105192-105283)
scaffold0022 (10-62)||(37929-37981)
scaffold0022 (10-62)||(135989-136041)
[»] scaffold0751 (1 HSPs)
scaffold0751 (123-203)||(1372-1451)
[»] scaffold0054 (4 HSPs)
scaffold0054 (118-190)||(59586-59658)
scaffold0054 (218-325)||(61006-61112)
scaffold0054 (118-190)||(61150-61221)
scaffold0054 (4-73)||(61266-61335)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-85)||(371241-371317)
[»] scaffold0211 (2 HSPs)
scaffold0211 (118-192)||(10334-10409)
scaffold0211 (7-67)||(10196-10256)
[»] scaffold1853 (1 HSPs)
scaffold1853 (4-173)||(1-170)
[»] scaffold0104 (2 HSPs)
scaffold0104 (123-188)||(26990-27055)
scaffold0104 (123-188)||(28372-28437)
[»] scaffold0007 (2 HSPs)
scaffold0007 (118-203)||(206852-206936)
scaffold0007 (4-85)||(206968-207050)
[»] scaffold0191 (1 HSPs)
scaffold0191 (117-184)||(10676-10744)
[»] scaffold0167 (1 HSPs)
scaffold0167 (10-85)||(7783-7859)
[»] scaffold0034 (4 HSPs)
scaffold0034 (117-188)||(9252-9324)
scaffold0034 (117-188)||(14816-14888)
scaffold0034 (10-56)||(9374-9420)
scaffold0034 (9-56)||(14938-14985)
[»] scaffold0009 (2 HSPs)
scaffold0009 (117-184)||(254446-254514)
scaffold0009 (117-184)||(247934-248002)
[»] scaffold0004 (2 HSPs)
scaffold0004 (117-183)||(322025-322092)
scaffold0004 (117-180)||(327713-327777)
[»] scaffold0947 (1 HSPs)
scaffold0947 (10-203)||(3331-3524)
[»] scaffold0114 (1 HSPs)
scaffold0114 (10-203)||(46980-47173)
[»] scaffold0093 (3 HSPs)
scaffold0093 (122-183)||(25576-25638)
scaffold0093 (122-183)||(36244-36306)
scaffold0093 (122-183)||(42651-42713)
[»] scaffold0031 (2 HSPs)
scaffold0031 (218-325)||(122003-122111)
scaffold0031 (218-325)||(132879-132987)
[»] scaffold0154 (1 HSPs)
scaffold0154 (116-192)||(17579-17656)
[»] scaffold0088 (1 HSPs)
scaffold0088 (130-234)||(32510-32615)
[»] scaffold0334 (1 HSPs)
scaffold0334 (117-192)||(9409-9485)
[»] scaffold0035 (1 HSPs)
scaffold0035 (117-192)||(1494-1570)
[»] scaffold0574 (1 HSPs)
scaffold0574 (118-188)||(5047-5118)
[»] scaffold0523 (1 HSPs)
scaffold0523 (117-203)||(6867-6954)
[»] scaffold0078 (1 HSPs)
scaffold0078 (117-203)||(16566-16653)
[»] scaffold0076 (2 HSPs)
scaffold0076 (117-183)||(982-1049)
scaffold0076 (16-56)||(893-933)
[»] scaffold0053 (1 HSPs)
scaffold0053 (10-144)||(45915-46048)
[»] scaffold0015 (1 HSPs)
scaffold0015 (117-183)||(170961-171028)
[»] scaffold0560 (1 HSPs)
scaffold0560 (130-234)||(136-241)
[»] scaffold0342 (1 HSPs)
scaffold0342 (131-184)||(16020-16073)
[»] scaffold0299 (1 HSPs)
scaffold0299 (131-180)||(3297-3346)
[»] scaffold0037 (1 HSPs)
scaffold0037 (131-192)||(45309-45370)
[»] scaffold0301 (2 HSPs)
scaffold0301 (132-192)||(4188-4248)
scaffold0301 (10-50)||(12688-12728)
[»] scaffold0139 (1 HSPs)
scaffold0139 (10-62)||(26743-26795)
[»] scaffold0126 (2 HSPs)
scaffold0126 (131-183)||(45176-45228)
scaffold0126 (227-256)||(45283-45312)
[»] scaffold0323 (2 HSPs)
scaffold0323 (117-183)||(8208-8275)
scaffold0323 (10-62)||(8112-8164)
[»] scaffold0019 (1 HSPs)
scaffold0019 (122-184)||(138006-138069)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-183)||(160663-160724)
[»] scaffold0282 (1 HSPs)
scaffold0282 (221-301)||(23076-23157)
[»] scaffold0266 (1 HSPs)
scaffold0266 (118-190)||(23967-24039)
[»] scaffold0214 (1 HSPs)
scaffold0214 (131-184)||(14388-14441)
[»] scaffold1584 (2 HSPs)
scaffold1584 (10-50)||(1185-1225)
scaffold1584 (132-188)||(1297-1353)
[»] scaffold0443 (1 HSPs)
scaffold0443 (117-184)||(14332-14400)
[»] scaffold0243 (1 HSPs)
scaffold0243 (131-183)||(11473-11525)
[»] scaffold0156 (1 HSPs)
scaffold0156 (117-192)||(26549-26624)
[»] scaffold0118 (1 HSPs)
scaffold0118 (117-184)||(8087-8155)
[»] scaffold0081 (1 HSPs)
scaffold0081 (4-75)||(55190-55262)
[»] scaffold0297 (1 HSPs)
scaffold0297 (117-249)||(844-978)
[»] scaffold0124 (2 HSPs)
scaffold0124 (10-45)||(10097-10132)
scaffold0124 (215-245)||(15911-15941)
[»] scaffold0121 (1 HSPs)
scaffold0121 (10-45)||(10107-10142)
[»] scaffold0113 (1 HSPs)
scaffold0113 (118-192)||(26767-26842)
[»] scaffold0074 (2 HSPs)
scaffold0074 (117-183)||(21131-21198)
scaffold0074 (10-50)||(21035-21075)
[»] scaffold0377 (2 HSPs)
scaffold0377 (10-56)||(4055-4101)
scaffold0377 (10-56)||(8094-8140)
[»] scaffold0097 (1 HSPs)
scaffold0097 (4-46)||(28701-28743)
[»] scaffold0089 (1 HSPs)
scaffold0089 (117-183)||(17694-17760)
[»] scaffold0041 (1 HSPs)
scaffold0041 (118-203)||(50928-51014)
[»] scaffold0405 (2 HSPs)
scaffold0405 (118-186)||(2455-2524)
scaffold0405 (118-186)||(11163-11232)
[»] scaffold0155 (1 HSPs)
scaffold0155 (10-55)||(31651-31696)
[»] scaffold0026 (1 HSPs)
scaffold0026 (118-190)||(36534-36606)


Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 14570653 - 14570985
Alignment:
Q  2 taaaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaatttc 101  Q
    ||||||| |||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||    
T  14570653 taaaatgttgtatgcaatcagaacctatttctaacaccaaaacaacaatatctacacccaattcaccaaaaactaagaattcaaagcctaacccaaattc 14570752  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  14570753 ccaattttcatccagaaa-cctgttaaaccaaaatcagaattcaatatctattctactgaagcaaacctcacccttaccttaattcagaaggacaaatgc 14570851  T
Q  202 accggaattggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaa 291  Q
    |||||||||| |||||          ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14570852 accggaattgaattctcttggctctacttggctcttctcccttttcttccaaaacttgtctgtttgcacgtaaaagcaattctgactatttctttcctaa 14570951  T
Q  292 ctcccctttacataacccccttttaattcattta 325  Q
    |||||||||||||||| |||||||||||||||||    
T  14570952 ctcccctttacataactcccttttaattcattta 14570985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 15954280 - 15953960
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttc 101  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||| || ||| ||| |   | ||||| | |    
T  15954280 aaatgttgtatgcaaccagaacctatttctaacatcaaaacaataatctctgcactcaattcactcaaaaacccaataatccaacataaaccccaaatcc 15954181  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||  | |    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||    
T  15954180 ccaatttctaccat--aaacttgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgc 15954083  T
Q  202 accggaattggattctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa-agcaattttgactatttc-tttcctaactcccctt 299  Q
    ||   |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||  || ||||| |||| ||||||||||||||      
T  15954082 acataaattggattcacttggctcttctcccttttctcccaaaacttgtctgttt-cacgtaaactgc--ttctgactgtttcttttcctaactccccaa 15953986  T
Q  300 tacataacccccttttaattcattta 325  Q
    |||||||| ||| |||| ||||||||    
T  15953985 tacataactcccctttatttcattta 15953960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 118 - 325
Target Start/End: Complemental strand, 15934161 - 15933955
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 217  Q
    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||||||||     
T  15934161 aaacttgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcacataaattggattca 15934062  T
Q  218 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa-agcaattttgactatttc-tttcctaactcccctttacataaccccctttt 315  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||  ||  || ||||| |||| ||||||||||||||  |||||||| ||| |||    
T  15934061 cttggctcttctcccttttctctcaaaacttgtctgttt-cacgtaaactgc--ttctgactgtttcttttcctaactccccaatacataactccccttt 15933965  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  15933964 atttcattta 15933955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 12203286 - 12203361
Alignment:
Q  159 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctccctt 234  Q
    |||||||||| |||| |||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||    
T  12203286 tgaagcaaacctcacgcttaccttaattcagaaggaaaaatgcacatcaattggattctcttggctcttctccctt 12203361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 11644129 - 11643937
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||||||||||| ||| ||||||||| ||||||||| |   | ||| || ||| |||||    
T  11644129 tgtatgcactcagaacctatttctaacatcagaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaatt 11644030  T
Q  108 ttcatctagaaaacctgtt--aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
     | |  |   |||||||||  ||| ||||||||||||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||    
T  11644029 ctaacat---aaacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagaaaaatgc 11643937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 17497039 - 17497232
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||| ||| ||||||||| ||||||| | |   | ||| || |||||||||    
T  17497039 tgtatgcactcagaacctatttctgtcatcagaacaacaatctctacactcaaatcacccaaaaacctagaattcgacataaaccccaaaattcccaatt 17497138  T
Q  108 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
     | |  |   ||||||||| ||| |||||||| |||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||    
T  17497139 ctaacat---aaacctgttaaaatcaaaatcaaaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 17497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 29551840 - 29551958
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||||| || ||||||||   ||||| |||    
T  29551840 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacaacaattgaatt 29551939  T
Q  216 ctcttggctcttctccctt 234  Q
    ||||||  |||||||||||    
T  29551940 ctcttgattcttctccctt 29551958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 12275114 - 12275340
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttc 101  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||||| || ||||||| |   | |||||  ||    
T  12275114 aaatgctgtatgcaaccagaacctatttctaacatcaaaacagtaatctctacactcaattcactcaaaaacccaataattcaacataaaccccaaaatc 12275213  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaa---acttcacccttaccttaattcagaaggagaaa 198  Q
    || | || |  | | | ||||||||||||||||||||||||  || |||||| ||||||||||||   || ||||||||||||||||||| | | | |||    
T  12275214 cccaattcctacca-ataacctgttaaaccaaaatcagaatcaaacatctatactactgaagcaaaccacctcacccttaccttaattcaaatgaacaaa 12275312  T
Q  199 tgcaccggaattggattctcttggctct 226  Q
    ||||| | ||| |||||| |||||||||    
T  12275313 tgcacagaaatcggattcacttggctct 12275340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 46070354 - 46070237
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 216  Q
    ||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||| ||||||||||||||||| || |||||||| | || |||||||    
T  46070354 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcactcttaccttaattcagaatgaaaaatgcacagcaaatggattc 46070255  T
Q  217 tcttggctcttctccctt 234  Q
    |||||| ||| |||||||    
T  46070254 tcttggttctcctccctt 46070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 12536940 - 12536869
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 194  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| |||||||||||||||||||||||||    
T  12536940 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaagga 12536869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 15519328 - 15519501
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  15519328 tgtatgcactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 15519427  T
Q  108 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
     |||  |   ||||||||| ||| |||||||||||||||  | |||  ||| |||||||||| ||||||||||||||    
T  15519428 ctcacat---aaacctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttacctta 15519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 9690707 - 9690594
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 220  Q
    ||||||||| ||||||||||| |||| |||||  ||||||||| |||  |||| ||||||||||||||||| || ||||||||   || |||||||||||    
T  9690707 ctgttaaactcaaaatcagaaattaacatctacactactgaagtaaatctcactcttaccttaattcagaatgaaaaatgcacatcaaatggattctctt 9690608  T
Q  221 ggctcttctccctt 234  Q
    || |||||||||||    
T  9690607 ggttcttctccctt 9690594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 12153829 - 12153898
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||||||| || |||| |||| ||||||| |||||| |||||||||||||||||||||||    
T  12153829 tgttaaaccaaaatcagagttcaataactatactactgaggcaaacctcacccttaccttaattcagaag 12153898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 13692888 - 13692975
Alignment:
Q  117 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| ||||||||| |||||||||||| | || | || ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  13692888 aaaacttgttaaacccaaaatcagaattcattaaccatactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 13692975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 20376487 - 20376381
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| | || ||||||||| ||| |||| ||||||||| |||  |||||||||| ||||||||||| || |||||||| | || ||||||    
T  20376487 aaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttacattaattcagaatgaaaaatgcacagcaaatggatt 20376388  T
Q  216 ctcttgg 222  Q
    |||||||    
T  20376387 ctcttgg 20376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 2498287 - 2498200
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| ||||||| || ||||||||    
T  2498287 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaatgaaaaatgcac 2498200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 11963388 - 11963325
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  11963388 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 11963325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 54090979 - 54090912
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  54090979 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 54090912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 49164073 - 49164142
Alignment:
Q  117 aaaacctgttaaac--caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||||||||  ||||||||||  |||| |||||| |||||||||||||| |||||||||||||||    
T  49164073 aaaacctgttaaacatcaaaatcagagattaacatctatactactgaagcaaacctcacccttaccttaa 49164142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 54832448 - 54832366
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| ||||||||||||||||||| || || ||||||||    
T  54832448 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaattcaaaatgaaaaatgcac 54832366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 10596897 - 10596825
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||  ||||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  10596897 aaaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 10596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 12355344 - 12355292
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12355344 tgtatgcactcagaacctatttctaacatcagaacaacaattgctacactcaa 12355292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 12361843 - 12361791
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12361843 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 12361791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 16823014 - 16822942
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||| ||||||||||||  || || ||| ||| |||||||||| ||||| |||||||||||||||    
T  16823014 aaacctgttaaatcaaaatcagaataaaaaatgtatactattgaagcaaacctcaccattaccttaattcaga 16822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 11955834 - 11955771
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||| |||||||||    
T  11955834 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacctttaccttaa 11955771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 12724369 - 12724306
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| |||| |||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  12724369 ctgttaaactcaaattcagaaattaatctctatactactgaagcaaacctcacccttaccttaa 12724306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 13036106 - 13036002
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaactcccctttacataaccccctttta 316  Q
    ||||||||||||||||||| ||||||||||||||||||    ||||||||||| || |||||  |  ||||||||||||||  ||| |||| ||| ||||    
T  13036106 cttggctcttctccctttttctcccaaaacttgtctgt----acgtaaaagcagttctgacttctcttttcctaactccccaatacttaactccccttta 13036011  T
Q  317 attcattta 325  Q
     ||||||||    
T  13036010 tttcattta 13036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 18718364 - 18718297
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||  ||||||||||| | |||| |||| |||||||||||||| ||||||||||||||    
T  18718364 aaaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttacctta 18718297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18756178 - 18756107
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||  ||||||||||| |||| |||| ||||| ||| |||  |||||||||||||||||||    
T  18756178 aaaacctgttaaactcaaatcagaattcaatacctatactactaaagtaaaagtcacccttaccttaattca 18756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 20188707 - 20188782
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||||||||| |||| ||||  |||||||  |||  |||||||||||||||||||||||    
T  20188707 aaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatctcacccttaccttaattcagaag 20188782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 28759775 - 28759850
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| |||||||||| |||||  ||||| ||| ||||| ||||  |||||||||||||||||||||    
T  28759775 aaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaaccccacccttaccttaattcagaa 28759850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 15375557 - 15375619
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||| |||||| |||| |||||||||||||| ||||||||||||||    
T  15375557 ctgttaaactcaaaattagaaattaatagctatactactgaagcaaacctcacccttacctta 15375619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 16330853 - 16330791
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||||||||||||||| |||| |||||| ||||||| ||||| ||||||||    
T  16330853 ctgttaaacacaaaatcagaatttaatagctatactactggagcaaacctcaccattacctta 16330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 16822904 - 16822870
Alignment:
Q  218 cttggctcttctcccttttctcccaaaacttgtct 252  Q
    |||||||||||||||||||||||||||||||||||    
T  16822904 cttggctcttctcccttttctcccaaaacttgtct 16822870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 16834143 - 16834205
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| ||||||  ||| |||||||||||||| ||||||||||||||    
T  16834143 ctgttaaacacaaaatcagaaattaataattatactactgaagcaaacctcacccttacctta 16834205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 17197895 - 17197849
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  17197895 tgtatgcactcagaacctatttctaacatcaaaataacaatctctac 17197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 17198361 - 17198315
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||    
T  17198361 tgtatgcactcagaacctatttctaacatcaaaataacaatctctac 17198315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 18961867 - 18961932
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    |||||||||||||| ||||||||||||| || |||||| ||| |||||||||| |||||||||||||    
T  18961867 aaaacctgttaaactcaaaatcagaatt-aacatctatactattgaagcaaacctcacccttacctt 18961932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 27034087 - 27034026
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27034087 ctgttaaacacaaaatcagaatt-aatagctatactactgaagcaaacctcacccttacctta 27034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 8373161 - 8373089
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||  ||||||||||| |||| || ||  |||||||||||||| |||||||||||| ||||||    
T  8373161 aaaacctgttaaattcaaaatcagaaattaacatttacactactgaagcaaacctcacccttacctgaattca 8373089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 12479018 - 12478966
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    |||||||||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  12479018 tgtatgcactcaaaacctatttctaacatcagaacaacaattcctacactcaa 12478966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 30596104 - 30596036
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||    
T  30596104 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaa 30596036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 32387262 - 32387190
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  32387262 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 32387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 11849663 - 11849588
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||| ||||| |||| ||||  ||||||| ||||  ||||||||||||||||| |||||    
T  11849663 aaacctgttaaatccaaaatccgaattcaataactatattactgaaacaaatctcacccttaccttaatttagaag 11849588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 11849760 - 11849713
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  11849760 cagaacctaattctaccatcagaacatcaatttctacactcaattcac 11849713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 12256529 - 12256596
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||  ||||||||||| | |||| |||| |||||||||||||| ||||||||| ||||    
T  12256529 aaaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttagctta 12256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 13667250 - 13667203
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  13667250 cagaacctaattctaccatcataacatcaatttctacactcaattcac 13667203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 21353092 - 21353167
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| |||| ||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  21353092 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 21353167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 50655251 - 50655164
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  50655251 aaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 50655164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 51854341 - 51854278
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  51854341 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 51854278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 53570470 - 53570407
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  53570470 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 53570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 6926857 - 6926795
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||||| |||| |||  ||| ||||| |||||||||||||||||||    
T  6926857 ctgttaaacacaaaatcagaattcaataactacactattgaagtaaacttcacccttacctta 6926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 11304985 - 11304875
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaat-atctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    ||||||||||||  ||||||||| ||||||  |||||  ||| ||||| |||| |||||||||||||||||||||| || |||||| |   | || ||||    
T  11304985 aaacctgttaaaatcaaaatcaggatttaaccatctacactattgaagtaaacctcacccttaccttaattcagaaagacaaatgctcaatagtttgatt 11304886  T
Q  216 ctcttggctct 226  Q
    |||||||||||    
T  11304885 ctcttggctct 11304875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 12201293 - 12201327
Alignment:
Q  232 cttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    ||||||||||||||||||||||||| |||||||||    
T  12201293 cttttctcccaaaacttgtctgttttcacgtaaaa 12201327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 12960718 - 12960660
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  12960718 aaatgttgtatgcaaccagaacctatttctaacatcaaaacaacagtctctgcactcaa 12960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 14288245 - 14288128
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactga-agcaaacttcacccttaccttaattcagaaggagaaatgc-accggaattggatt 215  Q
    |||| |||||||||||||||||||||  | |||||| ||| ||| || |||| ||||||||||||||||||||| | | |||| | || | |||  | ||    
T  14288245 aaacatgttaaaccaaaatcagaattaca-atctatactattgagagtaaacctcacccttaccttaattcagatgaacaaattctacagaaatctgttt 14288147  T
Q  216 ctcttggctcttctccctt 234  Q
    |||||||||||||||||||    
T  14288146 ctcttggctcttctccctt 14288128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 14844407 - 14844321
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||  |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14844407 aaaacctgttaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14844321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 16413520 - 16413450
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||| |||||||    
T  16413520 ctgttaaacacaaaatcagaaatcaataactatattactgaagtaaacctcacccttaccttagttcagaa 16413450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 12960616 - 12960548
Alignment:
Q  117 aaaacctgttaaacc--aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||   |||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  12960616 aaaacctgttaaactcaaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 12960548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 13036302 - 13036233
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa 73  Q
    ||||| |||||||| |||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||    
T  13036302 aaatggtgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaa 13036233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 18135652 - 18135607
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatcta 55  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| ||||    
T  18135652 tgtatgcgctcagaacctatttctaacatcagaacaacaatctcta 18135607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 19343505 - 19343444
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    ||||||||| ||||||||||| |||||| |||  ||| |||||||||| |||||||||||||    
T  19343505 ctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctt 19343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 24283769 - 24283660
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| |||||||| |||||||||||||||| ||  |||||||   | ||||| |||||| || ||||||| |||  |  ||||||||||||||| || |    
T  24283769 aaatgctgtatgcaatcagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacccaaatttc 24283670  T
Q  103 caattttcat 112  Q
    ||||||||||    
T  24283669 caattttcat 24283660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 192
Target Start/End: Original strand, 11889254 - 11889282
Alignment:
Q  164 caaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||||||||||||||||||    
T  11889254 caaacttcacccttaccttaattcagaag 11889282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 11964250 - 11964210
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||||||||||| |||||  ||||||||    
T  11964250 tgtatgcactcagaacctatttctaacatcaggacaacaat 11964210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 12724471 - 12724431
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  12724471 tgtatacactcagaacctatttctaacatcagaacaacaat 12724431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 15934275 - 15934215
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaatt 64  Q
    ||||| ||||||||  || |||||||||||| ||||||||||  ||||||| |||||||||    
T  15934275 aaatgctgtatgcaaccataacctatttctaacatcaaaacagtaatatctgcactcaatt 15934215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 18718460 - 18718420
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    |||||||||||| |||| ||||||| |||||||||||||||    
T  18718460 tgtatgcactcataacccatttctaacatcaaaacaacaat 18718420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 18961777 - 18961817
Alignment:
Q  16 cactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||| ||||| ||||||||| |||||    
T  18961777 cactcagaacctatttctaacatcagaacaacaatctctac 18961817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 316
Target Start/End: Original strand, 20007095 - 20007416
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaatttccc 103  Q
    ||||| ||||||||  ||||||||||||||| || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20007095 aaatgttgtatgcaaccagaacctatttctaacaccaaaatagcaatatctacactcaattcaccaaaaaccaagaattcaaaacctaacccaaattccc 20007194  T
Q  104 aattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||| || ||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  20007195 aattttcatccag-aaacctgttaaaccaaaattagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcac 20007293  T
Q  204 cggaattggattctcttggctc----------ttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaact 293  Q
     | ||||||||| |||||||||          || |||||||||||||||||||||||| |||||||||||||| | || ||||||||||||||||||||    
T  20007294 agaaattggattatcttggctctacttggttgttttcccttttctcccaaaacttgtctatttgcacgtaaaagaagttctgactatttctttcctaact 20007393  T
Q  294 cccctttacataaccccctttta 316  Q
    |||||||||||||| | ||||||    
T  20007394 cccctttacataactctctttta 20007416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 186
Target Start/End: Complemental strand, 14594062 - 14593885
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaatttcccaattt 108  Q
    ||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||| ||||||||||  | || ||    ||||||||||||||||||    
T  14594062 tgtatgcactcagaacctatttctaacatcaaaaaagcaatctctacactcaattcactcaaaaaccaaataatccaacataaacccaatttcccaattt 14593963  T
Q  109 tcatctagaaaacctgttaaaccaa-aatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaatt 186  Q
    ||||  |||| |  ||||||||||| ||||||||||| || ||||   || || ||| ||||||||||||||||||||||    
T  14593962 tcatacagaaca-atgttaaaccaagaatcagaatttcat-tctacattattgaaagtaaacttcacccttaccttaatt 14593885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 20005028 - 20004842
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| |||||||||||| |||||||||||| || ||||||||  ||  |||||||||||||||| |||||||||  | ||||| |  ||| |||  |||    
T  20005028 aaatgctgtatgcactcataacctatttctaacaccaaaacaatgattcctacactcaattcacccaaaaaccaaagaatcaaacctaaactcaaaatcc 20004929  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    | | ||||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||| |||||    
T  20004928 ccaatttctaccataaa-cctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaaatcaga 20004842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 20258214 - 20258104
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||  ||||||||||||| | ||||||  ||| ||||| |||| ||||||||||||||||| ||||| | ||||||||||  ||||||||    
T  20258214 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttaccttaatttagaagaaaaaatgcaccgcgattggatt 20258115  T
Q  216 ctcttggctct 226  Q
    |||||||||||    
T  20258114 ctcttggctct 20258104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 21044844 - 21044734
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||  ||||||||||||| | ||||||  ||| ||||| |||| ||||||||||||||||| ||||| | ||||||||||  ||||||||    
T  21044844 aaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagtaaacctcacccttaccttaatttagaagaaaaaatgcaccgcgattggatt 21044745  T
Q  216 ctcttggctct 226  Q
    |||||||||||    
T  21044744 ctcttggctct 21044734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 268
Target Start/End: Complemental strand, 20839247 - 20838989
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 107  Q
    |||||| ||||| |||||||||||| ||||| |||||||||  |||||||||||||||| ||||||| ||||||||| |   | |||||  |||||||||    
T  20839247 tgtatgtactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 20839148  T
Q  108 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 206  Q
     |||  ||   ||| |||||||  ||||||||||||| | || |||   || ||||| || || |||||||||||||||||||| | | ||| ||||       
T  20839147 ctcacata---aacttgttaaaatcaaaatcagaattcattaactacaatattgaagtaacct-cacccttaccttaattcagacgaacaaaagcacata 20839052  T
Q  207 aattggattctcttggctcttctc---ccttttctcccaaaacttgtctgtttgcacgtaaaagc 268  Q
    | |||||||| |||||||||||||   |||||||||||||  |||||||||||||||||||||||    
T  20839051 atttggattcacttggctcttctctccccttttctcccaa--cttgtctgtttgcacgtaaaagc 20838989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 21685399 - 21685068
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaat-tt 100  Q
    ||||| ||||||||  |||||||||||||||  |||||||||  ||| |||||||||||||||| |||||| |||| |||||| |    |||||||  ||    
T  21685399 aaatgttgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactcaaaaatccaataattcacata--aacccaaaatt 21685302  T
Q  101 cccaattttcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 199  Q
    ||||||||  |||    |||||||||||||| ||||||||||||  | || ||| ||||||||| |||| ||||||||||||||||||||| | | ||||    
T  21685301 cccaatttctatcat--aaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaacctcacccttaccttaattcagatgaacaaat 21685204  T
Q  200 gcaccggaat-tggat--------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcc 288  Q
    ||||   ||| ||| |        ||| |||||||||||||||||||||||| ||||||| |||||| ||||||||     || |||||||||| ||||     
T  21685203 gcacaacaatctggttcccttggctctacttggctcttctcccttttctccc-aaacttgactgttttcacgtaaactgctttctgactatttcttttct 21685105  T
Q  289 taactcccctttacataacccccttttaattcattta 325  Q
    ||||||||||||||||||| ||| |||| ||||||||    
T  21685104 taactcccctttacataactcccctttatttcattta 21685068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 21689748 - 21689417
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaat-tt 100  Q
    ||||| ||||||||  |||||||||||||||  |||||||||  ||| |||||||||||||||| |||||| |||| |||||| |    |||||||  ||    
T  21689748 aaatgttgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactcaaaaatccaataattcacata--aacccaaaatt 21689651  T
Q  101 cccaattttcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 199  Q
    ||||||||  |||    |||||||||||||| ||||||||||||  | || ||| ||||||||| |||| ||||||||||||||||||||| | | ||||    
T  21689650 cccaatttctatcat--aaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaacctcacccttaccttaattcagatgaacaaat 21689553  T
Q  200 gcaccggaat-tggat--------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcc 288  Q
    ||||   ||| ||| |        ||| |||||||||||||||||||||||| ||||||| |||||| ||||||||     || |||||||||| ||||     
T  21689552 gcacaacaatctggttcccttggctctacttggctcttctcccttttctccc-aaacttgactgttttcacgtaaactgctttctgactatttcttttct 21689454  T
Q  289 taactcccctttacataacccccttttaattcattta 325  Q
    ||||||||||||||||||| ||| |||| ||||||||    
T  21689453 taactcccctttacataactcccctttatttcattta 21689417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 19860482 - 19860566
Alignment:
Q  118 aaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    ||||||||| ||| ||||||||||||| |||| |||| ||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  19860482 aaacctgttcaaatcaaaatcagaattcaataactatactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgc 19860566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 16266075 - 16265988
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  16266075 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 16265988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 21682904 - 21682835
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||| |||||||||||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||    
T  21682904 aaaacttgttaaaccaaaatcaaaattcaataactatactactgaagcaaacctcacccttaccttaatt 21682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 19987511 - 19987429
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaa 85  Q
    ||||| ||||||||||||||||||||| |||  |||| |||||||||  ||||||||||||||| |||||||| |||||||||    
T  19987511 aaatgttgtatgcactcagaacctattcctaatatcagaacaacaattcctacactcaattcactcaaaaacctagaattcaa 19987429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 201
Target Start/End: Complemental strand, 36445073 - 36444881
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 107  Q
    ||||||||||| |||| |||| ||| ||||| |||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  |||||||||    
T  36445073 tgtatgcactcggaacttattcctaacatcagaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 36444974  T
Q  108 ttcatctagaaaacctgttaaac--caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
     | |  ||   |||||||||||   ||||||||||||| || | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||    
T  36444973 ctaacata---aacctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgc 36444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 14564435 - 14564507
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  14564435 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcac 14564507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 14567968 - 14568040
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| ||||||| || ||||||||    
T  14567968 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaatgaaaaatgcac 14568040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20773240 - 20773176
Alignment:
Q  162 agcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggattctcttggctc 225  Q
    ||||||| |||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  20773240 agcaaacctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20773176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 20783034 - 20782970
Alignment:
Q  162 agcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggattctcttggctc 225  Q
    ||||||| |||||||||||||||||||||||| | |||||||| | |||||||||||||||||||    
T  20783034 agcaaacctcacccttaccttaattcagaaggaaaaaatgcacagcaattggattctcttggctc 20782970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 22744563 - 22744748
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| ||||||||  ||||||||||||||| |||||||||||   | ||||| |||||| || |||||||||||  |  |||||||||||||||||| |    
T  22744563 aaatgttgtatgcaaccagaacctatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaaaaccaaagaaccaaaacctaacccaattttc 22744661  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 190  Q
    ||||||||||  || ||   |||||||||||||||| ||||| || ||||   || || ||| |||| |||||||||||||||||||||    
T  22744662 caattttcatacag-aactatgttaaaccaaaatcaaaatttcat-tctacattattgaaagtaaacatcacccttaccttaattcaga 22744748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 23223904 - 23223817
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||||| |||| || ||||||||    
T  23223904 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcac 23223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 43688312 - 43688379
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  43688312 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 43688379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 3223887 - 3223802
Alignment:
Q  119 aacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| ||||||||||||||||||| || || ||||||||    
T  3223887 aacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttaattcataatgaaaaatgcac 3223802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 20258310 - 20258258
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  20258310 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 20258258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 21044940 - 21044888
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  21044940 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 21044888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 11391813 - 11391746
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||| || ||| ||||||||| |||| ||||||||||||||    
T  11391813 aaaacctgttaaactcaaaatcagaaattaaaatttatactactgaagtaaacctcacccttacctta 11391746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 14745725 - 14745658
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| ||||||||||||||    
T  14745725 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 14745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 23654335 - 23654409
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    ||||| |||||||| ||||||||||||  || |||||| |||||||||||||| || || |||||||||||||||    
T  23654335 aaaacttgttaaactcaaaatcagaatcaaacatctatactactgaagcaaacctcccctttaccttaattcaga 23654409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 222
Target Start/End: Original strand, 27364223 - 27364328
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| |  || |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  27364223 aaaacctgttaaactcaaaatcagaaatcaataactacacta-tatagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 27364321  T
Q  216 ctcttgg 222  Q
    |||||||    
T  27364322 ctcttgg 27364328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 29304830 - 29304768
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||  ||| |||||||||||||||||||||||||    
T  29304830 ctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcacccttacctta 29304768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 29329023 - 29329069
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  29329023 tgtatacactcagaacctatttctaacatcaaaacaacaatttctac 29329069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 27346574 - 27346674
Alignment:
Q  101 cccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 199  Q
    |||||||||||||   |||| ||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||| ||||||||||||||||| || ||||    
T  27346574 cccaattttcatc---aaaatctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacacttaccttaattcagaatgaaaaat 27346670  T
Q  200 gcac 203  Q
    ||||    
T  27346671 gcac 27346674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 7003276 - 7003208
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||||| |||| |||  ||| ||||| |||| |||||||||||||||    
T  7003276 aaaacctgttaaactcaaaatcagaattcaataactacactattgaagtaaacctcacccttaccttaa 7003208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 19297425 - 19297511
Alignment:
Q  96 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  19297425 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 19297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 26485221 - 26485153
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  26485221 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 26485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 40143547 - 40143479
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||||||||    
T  40143547 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaa 40143479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 9204557 - 9204482
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  |||||||||||||||||||||    
T  9204557 aaaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttaattcagaa 9204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 10955892 - 10955825
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  10955892 aaaacctgttaaacacaaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 10955825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 20773380 - 20773345
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaaca 45  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20773380 tgtatgcactcagaacctatttctaacatcaaaaca 20773345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 20783174 - 20783139
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaaca 45  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20783174 tgtatgcactcagaacctatttctaacatcaaaaca 20783139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31411717 - 31411650
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||| |||||| ||||||||||||| |||| |||| ||||||||| |||  ||||||||||||||    
T  31411717 aaaacctattaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttacctta 31411650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31417899 - 31417832
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||| ||||||||| |||| |||| ||||||||| |||  ||||||||||||||    
T  31417899 aaaacctgttaaactcaatatcagaattcaatacctatactactgaagtaaaactcacccttacctta 31417832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 1264896 - 1264942
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  1264896 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 1264942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 9272266 - 9272232
Alignment:
Q  232 cttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    ||||||||||||||||||||||||| |||||||||    
T  9272266 cttttctcccaaaacttgtctgttttcacgtaaaa 9272232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 21682991 - 21682949
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||| |||||||||| |||| |||||||||||    
T  21682991 cagaacctatttctaacatcaaaacatcaatctctacactcaa 21682949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 25623914 - 25623794
Alignment:
Q  70 aaaaccaagaattcaaaaccta-acccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaa 167  Q
    ||||||||| | ||| |||||| |||||| ||||||||||| | | | ||||| ||||||||||||||||||| |||  |||||| ||| || ||| |||    
T  25623914 aaaaccaaggaatcataacctagacccaaattcccaatttttaacca-aaaacatgttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaa 25623817  T
Q  168 cttcacccttaccttaattcaga 190  Q
    | |||||||||||||| ||||||    
T  25623816 cctcacccttaccttagttcaga 25623794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 27890813 - 27890874
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27890813 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 27897146 - 27897207
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27897146 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27897207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 27903052 - 27903113
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27903052 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 27949471 - 27949532
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  27949471 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 29298275 - 29298213
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||  ||| |||||||||||||| ||||||||||    
T  29298275 ctgttaaactcaaaatcagaaattaacatctacactattgaagcaaacttcagccttacctta 29298213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 29329124 - 29329186
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||| |||| |||| |||||  |||||||||||||| ||||||||||||||    
T  29329124 ctgttaaactcaaaattagaaattaacatctacactactgaagcaaacctcacccttacctta 29329186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 4519930 - 4519865
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  4519930 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 4519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 22459027 - 22459092
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  22459027 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 22459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 16886489 - 16886429
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  16886489 caaaatcagactttaaaatctacactattgaagtaaacatcacccttaccttagttcagaa 16886429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 19860385 - 19860433
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacac 58  Q
    |||||||||||||| |||||||||| ||||| |||| |||| |||||||    
T  19860385 tgtatgcactcagaccctatttctaacatcagaacatcaatctctacac 19860433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 35541965 - 35542009
Alignment:
Q  159 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||    
T  35541965 tgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 35542009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 132; Significance: 2e-68; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 448987 - 448656
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttc 101  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   | || || |||    
T  448987 aaatgttgtatgcattcagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaattc 448888  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||  | | | ||  ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  448887 ccaatttctaccaataa--cctgttaaatcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctaaattcagaaggacaaatgc 448790  T
Q  202 accggaattggattctcttggctct----------tctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaa 291  Q
    |  | ||||||||||||||||||||          |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  448789 aaagaaattggattctcttggctctacttggctcttctcacttttctcccaaaacttgtctgtttgcacgtaaaagcagttctgactatttctttcctaa 448690  T
Q  292 ctcccctttacataacccccttttaattcattta 325  Q
    ||||||  |||||||| ||| |||| ||||||||    
T  448689 ctccccaatacataactcccctttatttcattta 448656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 179918 - 179999
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||| ||||||||||| |||  |||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||    
T  179918 ctgttaaatcaaaatcagaacttagaatctatactacagaagcaaacctcacccttaccttaattcagaagcacaaatgcac 179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 511821 - 511753
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  511821 aaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 511753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 96712 - 96775
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa 73  Q
    ||||||||||||||||||||| ||| ||||| |||||||||  |||| ||||||||||| ||||    
T  96712 tgtatgcactcagaacctattactaacatcagaacaacaattcctaccctcaattcacccaaaa 96775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 325
Target Start/End: Original strand, 13318551 - 13318870
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 107  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| ||| |   | || || | |||||||    
T  13318551 tgtatgcaaccagaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaatccccaatt 13318650  T
Q  108 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 207  Q
    |    |||  |    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |    
T  13318651 t----ctacca----tgttaaatcaaaatcagaattcaatatctattctactgaagcaaacttcacccttaccttaattcagaaggacaaatgcacagaa 13318742  T
Q  208 attggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaactcccc 297  Q
    ||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13318743 attggattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcagttctgactatttctttcctaactcccc 13318842  T
Q  298 tttacataacccccttttaattcattta 325  Q
    | ||| |||| ||| |||| ||||||||    
T  13318843 tatacttaactcccctttatttcattta 13318870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 15436887 - 15436556
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||     | |||||  | |    
T  15436887 aaatgctgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaacttaaaccccaaaattc 15436788  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgca 202  Q
    | | ||||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||||||  |||||||    
T  15436787 cgaatttctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaagggcaaatgca 15436689  T
Q  203 ccggaattggattctcttggctct----------tctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaac 292  Q
    | | ||||||||| ||||||||||          ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  15436688 cagaaattggattatcttggctctacttggctcttctcccttttctcccaaaacttgtctgttggcacgtaaaagcagttctgactatttctttcctaac 15436589  T
Q  293 tcccctttacataacccccttttaattcattta 325  Q
    |||||  ||| |||| ||| |||| ||||||||    
T  15436588 tccccaatacttaactcccctttatttcattta 15436556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 14168861 - 14168637
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat--ttcccaat 106  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||   ||||||||    
T  14168861 tgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaat 14168762  T
Q  107 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 206  Q
    | | |||    ||||||||||||   ||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||       
T  14168761 tct-atcat--aaacctgttaaattcaaatcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacaac 14168665  T
Q  207 aattggattctcttggctcttctccctt 234  Q
     || ||||||||||||||||||||||||    
T  14168664 gatcggattctcttggctcttctccctt 14168637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 14173108 - 14172884
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat--ttcccaat 106  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||   ||||||||    
T  14173108 tgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaat 14173009  T
Q  107 tttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 206  Q
    | | |||    ||||||||||||   ||||||||||| |||| ||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||       
T  14173008 tct-atcat--aaacctgttaaattcaaatcagaattcaataactatattactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacaac 14172912  T
Q  207 aattggattctcttggctcttctccctt 234  Q
     || ||||||||||||||||||||||||    
T  14172911 gatcggattctcttggctcttctccctt 14172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 81408 - 81121
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa---ccaagaattcaaaacctaacccaat-ttcccaa 105  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||| |||||   |||| ||| ||| |   | |||||  |||| ||    
T  81408 tgtatgcactcagaacctatttctaacatcaaaacagcaatctctaccctcaattcactaaaaaaacccaataatccaacataaaccccaaaattcctaa 81309  T
Q  106 ttttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcacc 204  Q
    || | |||    |||| ||||||| ||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||     
T  81308 ttct-atcat--aaacttgttaaatccaaactcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcaca 81212  T
Q  205 ggaatt-ggattctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaactcccc 297  Q
      ||||  | ||| |||||||||||||||||||||||||||||   ||||| || ||||||||||| || |||||  |  ||||||||||||||    
T  81211 acaattcaggttcacttggctcttctcccttttctcccaaaac---tctgtctgtacgtaaaagcagttctgacttctcttttcctaactcccc 81121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 15097166 - 15097019
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 215  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||  | ||    
T  15097166 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaattaaggtt 15097067  T
Q  216 ctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    | ||||| |||||||||||||||||||||||   ||||||| |||||||||    
T  15097066 cacttggttcttctcccttttctcccaaaac---tctgttttcacgtaaaa 15097019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 15103542 - 15103410
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 215  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||  | ||    
T  15103542 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagcaattcaggtt 15103443  T
Q  216 ctcttggctcttctcccttttctcccaaaactt 248  Q
    | ||||| |||||||||||||||||||||||||    
T  15103442 cacttggttcttctcccttttctcccaaaactt 15103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 45186296 - 45186482
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaaccc---aatt 99  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||  | ||| ||   || |    
T  45186296 aaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa--cttaaaccccaaaat 45186393  T
Q  100 tcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||  | |    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  45186394 tcccaatttctaccat--aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 45186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 15085175 - 15085067
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||||| || |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||| | |||||||||    
T  15085175 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagtaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggatt 15085077  T
Q  216 ctcttggctc 225  Q
    ||||||||||    
T  15085076 ctcttggctc 15085067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 12555403 - 12555519
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 217  Q
    |||||| ||||||||||||||||||| |||| |||| |||||||||||||| |||| ||||||||||||||||| || |||  |||    || |||||||    
T  12555403 aaacctattaaaccaaaatcagaattcaataactatactactgaagcaaacctcactcttaccttaattcagaaagacaaaaacacaacgatcggattct 12555502  T
Q  218 cttggctcttctccctt 234  Q
    |||||||||||||||||    
T  12555503 cttggctcttctccctt 12555519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 14580868 - 14580675
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcccaatt 107  Q
    ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  ||||||||||||     | || || |||||||||    
T  14580868 tgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacttaaacccaaaattcccaatt 14580769  T
Q  108 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |  | |    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | ||||||||    
T  14580768 tctaccat--aaacttgttaaatcaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcac 14580675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 11854618 - 11854538
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  11854618 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 11854538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 230
Target Start/End: Original strand, 3328762 - 3328871
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggattctctt 220  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||  |||||||||||||||||||   | |||||||||| | |||  ||||||||||    
T  3328762 ctgttaaaccaaaatcagaattcaatatctatactactgaagtaaaactcacccttaccttaattcaattgaagaaatgcacagcaataaggattctctt 3328861  T
Q  221 ggctcttctc 230  Q
    || |||||||    
T  3328862 ggttcttctc 3328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 10520753 - 10520833
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||||||| || |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  10520753 tgttaaaccaaaatcagatttcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 10520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 33405576 - 33405679
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||||| |||| || |||||||| | |||||||||    
T  33405576 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatttagaatgaaaaatgcacagcaattggatt 33405675  T
Q  216 ctct 219  Q
    ||||    
T  33405676 ctct 33405679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 32772392 - 32772457
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||| || ||||||||||||||||    
T  32772392 tgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcgcccttaccttaattca 32772457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 15143174 - 15143246
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||| |||| |||||||||||||| ||||||    
T  15143174 aaacccgttaaaccaaaatcagaattaaaaatctatactactgaagtaaacctcacccttaccttatttcaga 15143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 16475337 - 16475265
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||| ||||||||||||    
T  16475337 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttgccttaattcaga 16475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 11340665 - 11340752
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| ||||||| |||   |||||||| |||| |||||||||||||||||||||| || ||||||||    
T  11340665 aaaacctgttaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 11340752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 18956086 - 18956015
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||  ||||||||||| ||||||||| ||||||||| |||  |||||||||||||||||||    
T  18956086 aaaacctgttaaactcaaatcagaattcaatatctatactactgaagtaaaactcacccttaccttaattca 18956015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 30271027 - 30270964
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  30271027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacttcacccttaccttaa 30270964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 12454985 - 12455053
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  12454985 aaaacctgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12455053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 5186490 - 5186403
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaattt-aatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||||  |||||||| ||| || |||||| ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  5186490 aaaacctgttaaactcaaatcagacttttaaaatctatactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 5186403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 12429684 - 12429739
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    |||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  12429684 tgatgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 12429739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 16951440 - 16951369
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||  ||||||||||| |||| |||| ||||||||| |||  |||||||||||||||||||    
T  16951440 aaaacctgttaaactcaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 16951369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 18436438 - 18436351
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||| |||||||||| ||||||| |||   |||||||| |||| |||||||||||||||||||||| || ||||||||    
T  18436438 aaaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 18436351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3328653 - 3328711
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||| ||||| ||||||||||||||||||| |||||||||| |||| |||||||||||    
T  3328653 aaatgctgtatacactcagaacctatttctaacatcaaaacagcaatctctacactcaa 3328711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 16843112 - 16843050
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  16843112 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 16843050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 45186520 - 45186626
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||| |||||||||  |  ||||||||||||||||||| || |||||||||| |||||||||| |||  |||||||| ||| |||    
T  45186520 cttggctcttctccctttttctcccaaaagct--ctgtttgcacgtaaaagcagttctgactatttcttttcctaact-cccaatacataactccccttt 45186616  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  45186617 atttcattta 45186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 12800714 - 12800665
Alignment:
Q  218 cttggctcttctcccttttctcccaaaacttgtctg-tttgcacgtaaaa 266  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  12800714 cttggctcttctcccttttctcccaaaacttgtatgttttgcacgtaaaa 12800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 15103650 - 15103593
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||  ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  15103650 tgtatgcaaccagaacctatttctcacatcaaaacaacaatctctacactcaattcac 15103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 6412794 - 6412858
Alignment:
Q  120 acctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||| ||||||||||||  ||||||||| ||| |||||||||| ||||||||||||||    
T  6412794 acctgttaaactcaaaatcagaatacaatatctatactaatgaagcaaacctcacccttacctta 6412858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 11298930 - 11298870
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  11298930 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaa 11298870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 11307294 - 11307234
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| |||||||    
T  11307294 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcagaa 11307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 12462441 - 12462509
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||| |||||||| ||||||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  12462441 aaaacttgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12462509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 13020631 - 13020698
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  13020631 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13020698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 13026838 - 13026905
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  13026838 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13026905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 16069590 - 16069512
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactcc 295  Q
    ||||||||||||||||||| ||||||||| || | | |||||||||||||||| || |||||||||| ||||||||||||    
T  16069590 cttggctcttctccctttttctcccaaaagttctgt-tttgcacgtaaaagcagttctgactatttcttttcctaactcc 16069512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 17467456 - 17467381
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||||||||  |||| ||||  ||||||| ||||  |||||||||||||||||||||||    
T  17467456 aaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatctcacccttaccttaattcagaag 17467381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 17585758 - 17585833
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||||||||  |||| ||||  ||||||| ||||  |||||||||||||||||||||||    
T  17585758 aaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatctcacccttaccttaattcagaag 17585833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 26089198 - 26089123
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26089198 aaaacctgttaaaaccaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 26089123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 26113003 - 26112928
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26113003 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 26112928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 26119620 - 26119545
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  26119620 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 26119545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 26288983 - 26288917
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||| ||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  26288983 aaaatctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 26288917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 30602108 - 30602021
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||  |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  30602108 aaaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 30602021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 37380861 - 37380936
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||||||||| |||| ||||  |||||||  |||  |||||||||||||||||||||||    
T  37380861 aaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatctcacccttaccttaattcagaag 37380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 750768 - 750834
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  750768 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 750834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 16073154 - 16073048
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||| | ||||||| || |  ||||||||||||||| | ||||||||||||| |||||||||| |||  |||||||| ||| |||    
T  16073154 cttggctcttctccctttttcacccaaaagtttt--gtttgcacgtaaaagtagttttgactatttcttttcctaact-cccaatacataactccccttt 16073058  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  16073057 atttcattta 16073048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 40684008 - 40683942
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  40684008 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 40683942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 46175250 - 46175312
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  46175250 ctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 46175312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 48987167 - 48987101
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  48987167 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 48987101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 2378 - 2309
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||||||||  ||||||||||  || |||||| ||||||||| |||  |||||||||||||||||    
T  2378 aaaacctgttaaactcaaatcagaatccaacatctatactactgaagtaaaactcacccttaccttaatt 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 15097274 - 15097217
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||  ||||||||||||||  |||||||||| |||| ||||||||||||||||    
T  15097274 tgtatgcaaccagaacctatttctcacatcaaaacaccaatctctacactcaattcac 15097217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 46681394 - 46681329
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    ||||||||||||  ||||||||||||| || | |||| |||||||||||||| |||||||||||||    
T  46681394 aaacctgttaaattcaaaatcagaattcaaaaactatactactgaagcaaacctcacccttacctt 46681329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 49151512 - 49151601
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 205  Q
    |||||||||||||| |||||||||| |||||| ||||  | | ||||| ||||  ||||||||||||| ||||||| || ||||||||||    
T  49151512 aaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcaccg 49151601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 49158202 - 49158291
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 205  Q
    |||||||||||||| |||||||||| |||||| ||||  | | ||||| ||||  ||||||||||||| ||||||| || ||||||||||    
T  49158202 aaaacctgttaaactcaaaatcagactttaatttctacaccattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcaccg 49158291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12555305 - 12555357
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||    
T  12555305 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaa 12555357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16184764 - 16184712
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| | ||| |||||||||  ||||||||||    
T  16184764 tgtatgcactcagaacctatttctaacctcagaacaacaattcctacactcaa 16184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 19463600 - 19463672
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  19463600 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 19463672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 37288391 - 37288459
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  37288391 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 37288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 46650643 - 46650695
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||  ||||| ||||| |||||||||||||| ||||||||||||||    
T  46650643 caaaatcagagattaatgtctatactactgaagcaaacctcacccttacctta 46650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 2025470 - 2025403
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||||||  ||||  ||| ||||| |||| ||||||||||||||    
T  2025470 aaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacctta 2025403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 13020532 - 13020575
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||    
T  13020532 tgatgtatacactcagaacctatttctaacatcagaacaacaat 13020575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 37380764 - 37380811
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  37380764 cagaacctaattctaccatcagaacatcaatttctacactcaattcac 37380811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 46348061 - 46348022
Alignment:
Q  11 gtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  46348061 gtatgcactcagaacctatttctaacatcagaacaacaat 46348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 190
Target Start/End: Complemental strand, 16069671 - 16069629
Alignment:
Q  148 atctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||| |||||||||||||| ||||||||||||||| |||||    
T  16069671 atctatactactgaagcaaacctcacccttaccttaaatcaga 16069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 23521905 - 23521971
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||    
T  23521905 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttacctt 23521971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 40922167 - 40922081
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  40922167 aaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 40922081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 12695528 - 12695588
Alignment:
Q  83 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaattt 144  Q
    ||||||||||||||| ||||||||||| ||  |||| | | |||||||||||||||||||||    
T  12695528 caaaacctaacccaaattcccaattttgatacagaacaac-gttaaaccaaaatcagaattt 12695588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 14945162 - 14945109
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||| | ||||||||| ||||||||| |||  ||||||||||||||    
T  14945162 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 14945109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 325
Target Start/End: Original strand, 15143270 - 15143382
Alignment:
Q  214 ttctcttggctcttctcccttttc-tcccaaaacttgtctgtttgcacgtaaaagcaattt-tgactatttc--tttcctaactcccctttacataaccc 309  Q
    ||| |||||||||||||||||||  ||||||||  |  ||||||||||||||||||| ||| ||||||||||  |||||||||| |||  |||||||| |    
T  15143270 ttcacttggctcttctccctttttatcccaaaagct--ctgtttgcacgtaaaagcagtttctgactatttctttttcctaact-cccaatacataactc 15143366  T
Q  310 ccttttaattcattta 325  Q
    || |||| ||||||||    
T  15143367 ccctttatttcattta 15143382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 15372755 - 15372702
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||| | ||||||||| ||||||||| |||  ||||||||||||||    
T  15372755 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 15372702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 37243511 - 37243446
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    ||||||||||||||  ||||||||||  ||||||||| |||||||||  ||  |||||||||||||    
T  37243511 aaaacctgttaaactcaaatcagaatccaatatctatactactgaagtgaaactcacccttacctt 37243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 42059483 - 42059548
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  42059483 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 42059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 46681502 - 46681445
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||||||  ||||||||||||||| ||||| |||||| || | ||||||||||||||    
T  46681502 tgtatgcaaccagaacctatttctaacatcagaacaacgatctatacactcaattcac 46681445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 2387827 - 2387759
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| |||||  ||| ||||| |||| |||||||||| ||||    
T  2387827 aaaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttactttaa 2387759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 4281121 - 4281181
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||| |||||||| |||| ||||  ||||||||||||  |||||||||||||| |||||||    
T  4281121 caaattcagaattcaataactatattactgaagcaaatctcacccttaccttagttcagaa 4281181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 12462355 - 12462391
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  12462355 cagaacctaattctaacatcaaaacaacaatatctac 12462391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 13026742 - 13026782
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  13026742 tgtatacactcagaacctatttctaacatcagaacaacaat 13026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 13453047 - 13452979
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  13453047 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 13452979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 21758218 - 21758286
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  21758218 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 21758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 35962042 - 35961990
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  35962042 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 35961990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 42059382 - 42059414
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaa 42  Q
    ||||||||||||||||||||||||| |||||||    
T  42059382 tgtatgcactcagaacctatttctaacatcaaa 42059414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 46626004 - 46626044
Alignment:
Q  170 tcacccttaccttaattcagaaggagaaatgcaccggaatt 210  Q
    ||||||||| ||||||||||||||| |||||||||| ||||    
T  46626004 tcacccttatcttaattcagaaggaaaaatgcaccgaaatt 46626044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 49159703 - 49159775
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||| | |||| |||  ||| ||||  |||| |||| ||||||||||||||||| |||||||||||    
T  49159703 caaaatcagaaatcaataactacactattgaactaaacctcactcttaccttaattcagaatgagaaatgcac 49159775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 307
Target Start/End: Original strand, 3099 - 3412
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaaaacctaacccaatttc 101  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||   ||||||||| ||| ||| |   | || || |||    
T  3099 aaatgttgtatgcattcagaacctatttctaacatcaaaacagcaatctctacaatcaattcactcaaaaaaccaataatccaacataaacccaaaattc 3198  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||  | | | ||  ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  3199 ccaatttctaccaataa--cctgttaaatcaaaatcagaattcaatatctattctactgaagcaaacctcacccttacctcaattcagaacgacaaatgc 3296  T
Q  202 accggaattggattctcttg----------gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaa 291  Q
    |  | ||||| |||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  3297 aaagaaattgcattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcagttctggctatttctttcctaa 3396  T
Q  292 ctcccctttacataac 307  Q
    ||||||  ||||||||    
T  3397 ctccccaatacataac 3412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 8577 - 8324
Alignment:
Q  22 gaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaattttcatctagaaa 119  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || ||| ||| |   | || || | ||||||||  | |   | |    
T  8577 gaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaacccaataatccaacataaacccaaaatccccaatttctacc---ata 8481  T
Q  120 acctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctct 219  Q
    || ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||    
T  8480 acttgttaaaccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggattctct 8381  T
Q  220 tgg----------ctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    |||          |||||||||||||||||||||||||||||||||| |||||||||    
T  8380 tggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 8324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 325
Target Start/End: Original strand, 18272130 - 18272454
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 107  Q
    ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   | || || | |||||||    
T  18272130 tgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatacaacataaacccaaaatccccaatt 18272229  T
Q  108 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 207  Q
    |  | |   | ||| ||||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||||| |||||||    |    
T  18272230 tctacc---ataacttgttaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcggaaggacaaatgcataaaa 18272326  T
Q  208 attggattct----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaactcccc 297  Q
    ||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| ||| || | | || |||||||||||||||||    
T  18272327 attggattctcttggctctacttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaacgcagttctcattaattctttcctaactcccc 18272426  T
Q  298 tttacataacccccttttaattcattta 325  Q
      ||| |||| ||| |||| ||||||||    
T  18272427 aatacttaactcccctttatttcattta 18272454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 10783496 - 10783366
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 216  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||  | |||    
T  10783496 aaacctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacaacaattctggttc 10783397  T
Q  217 tcttggctcttctcccttttctcccaaaact 247  Q
     ||||||||||||||||||||||||||||||    
T  10783396 acttggctcttctcccttttctcccaaaact 10783366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 15360031 - 15359920
Alignment:
Q  124 gttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||||||| ||||||| |||| ||||||||| |||||||||||||| ||| ||||||||||| ||||||||| |||||||| | ||||||||||||||||    
T  15360031 gttaaacctaaaatcataattcaatatctatactactgaagcaaacctcatccttaccttaactcagaaggaaaaatgcacagcaattggattctcttgg 15359932  T
Q  223 ctcttctccctt 234  Q
    ||||||||||||    
T  15359931 ctcttctccctt 15359920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 118 - 247
Target Start/End: Complemental strand, 10972147 - 10972017
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 216  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||| | | ||||||||   ||||  | |||    
T  10972147 aaacctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgcacaacaattctggttc 10972048  T
Q  217 tcttggctcttctcccttttctcccaaaact 247  Q
      |||||||||||||||||||||||||||||    
T  10972047 aattggctcttctcccttttctcccaaaact 10972017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 17177210 - 17177434
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 107  Q
    ||||||||||||||||||||||| | |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  ||| |||||    
T  17177210 tgtatgcactcagaacctatttcaaacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaatt 17177309  T
Q  108 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgg 206  Q
     | |||    ||||||||||||  |||||||||||||  | | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||       
T  17177310 ct-atcat--aaacctgttaaaatcaaaatcagaattctacaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcacaac 17177406  T
Q  207 aattggattctcttggctcttctccctt 234  Q
     || ||||||||||||||||||||||||    
T  17177407 gatcggattctcttggctcttctccctt 17177434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 16228327 - 16228216
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||||||||||||||||||||||||| |||  ||| |||||||||| ||||||||||||||| ||||| | | ||||||||   ||| ||||||||||||    
T  16228327 tgttaaaccaaaatcagaatttaataactacactattgaagcaaacctcacccttaccttaaatcagatgaacaaatgcacaacaatcggattctcttgg 16228228  T
Q  223 ctcttctccctt 234  Q
    ||||||||||||    
T  16228227 ctcttctccctt 16228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 53904553 - 53904473
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  53904553 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 53904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 30239881 - 30240079
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa-cccaatttc 101  Q
    ||||| |||||||||||| |||||||||||| ||||||| ||   ||  |||||||||||||||| |||||||||||||||||  | ||| |||||  ||    
T  30239881 aaatgctgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaagaattcaa--cttaaacccaaaatc 30239978  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    || | ||||  | | ||| ||||||||||||||||||||||| || |||||  |||| |||| |||| ||| ||||||||||||||||| | | ||||||    
T  30239979 cccaatttctaccataaa-cctgttaaaccaaaatcagaattgaaaatctacactaccgaagtaaacctcatccttaccttaattcagatgaacaaatgc 30240077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 33222220 - 33222302
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| ||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  33222220 ctgttaaacacaaaatcagaattcaatgtctatactactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcac 33222302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10783600 - 10783542
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  10783600 aaatgatgtatacactcagaacctatttctaacatcaaaacaacaatctctacactcaa 10783542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 15004458 - 15004273
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaa-aaaccaagaattcaaaacctaa-cccaatttc 101  Q
    ||||| |||||||||||| ||||| |||||| ||||||| ||   ||  |||||||||||||||| | |||||||||||||||  | ||| |||||  ||    
T  15004458 aaatgttgtatgcactcataacctgtttctaacatcaaaccagtgattcctacactcaattcacccacaaaccaagaattcaa--cttaaacccaaaatc 15004361  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    || | ||||| | | ||| ||||||||| ||||||||||||| || |||||   ||||||||||||| ||||||||||||||| |||||    
T  15004360 cctaatttcaaccataaa-cctgttaaatcaaaatcagaattaaacatctacagtactgaagcaaacctcacccttaccttaaatcaga 15004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 14991837 - 14991765
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||| ||||||||||||| || |||||  |||||||||||||| ||||||||||||||| |||||    
T  14991837 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaaatcaga 14991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 16485623 - 16485727
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttg 221  Q
    |||||||| |||||||||||||  | |||||| || ||||||||||  ||||||||||||||||||||| | | |||||||| | ||| |||||| ||||    
T  16485623 ctgttaaatcaaaatcagaattagacatctatactgctgaagcaaatatcacccttaccttaattcagatgaacaaatgcacagaaatcggattcacttg 16485722  T
Q  222 gctct 226  Q
    |||||    
T  16485723 gctct 16485727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 7360119 - 7360222
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  7360119 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 7360218  T
Q  216 ctct 219  Q
    ||||    
T  7360219 ctct 7360222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 21882464 - 21882531
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||||| |||| |||||||||||||| ||||||||||||||    
T  21882464 aaaacctgttaaactcaaaatcagaaattaatagctatactactgaagcaaacctcacccttacctta 21882531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 10972251 - 10972193
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  10972251 aaatgatgtatacactcaaaacctatttctaacatcaaaacaacaatctctacactcaa 10972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 900467 - 900535
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||| ||||||| |||||| ||||||||| |||| |||||||||||||||    
T  900467 aaaacctgttaaactcaaaatcataatttaaaatctatactactgaagtaaacctcacccttaccttaa 900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 16157792 - 16157852
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||| |||||||| |||| || |||||||||||||||| ||||||||||||||||||||||    
T  16157792 caaattcagaattcaataactgttctactgaagcaaacctcacccttaccttaattcagaa 16157852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 42221303 - 42221371
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||| |||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  42221303 aaaacttgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 42221371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 49051918 - 49051990
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| ||||||||||||| |||| |||| ||||||||| |||  |||||||||||||||||||    
T  49051918 aaaacctgttaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 49051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 14063677 - 14063744
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||| |||||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  14063677 aaaacgtgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 14063744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 30397027 - 30397090
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  30397027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 30397090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 19127533 - 19127475
Alignment:
Q  133 aaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||||    
T  19127533 aaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcagaa 19127475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 33097972 - 33098034
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  33097972 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 33098034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 13480241 - 13480151
Alignment:
Q  92 acccaatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  13480241 acccaatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 13480151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 14991723 - 14991620
Alignment:
Q  222 gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattt-tgactatttctttcctaactcccctttacataacccccttttaattc 320  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||    ||| ||||||||| ||||||||||||||  ||| |||| ||| |||| |||    
T  14991723 gctcttctcccttttctcccaaaacttgtctg-ttgtacgtgaaactgctttctgactatttttttcctaactccccaatacttaactcccctttatttc 14991625  T
Q  321 attta 325  Q
    |||||    
T  14991624 attta 14991620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 18165500 - 18165424
Alignment:
Q  117 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||| ||||||||| |||||||||||| |||| |||  ||| |||||||||| |||||||||||||||| ||||||    
T  18165500 aaaacttgttaaacccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaatccagaag 18165424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 3259201 - 3259114
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| || |||| |||   |||||| | |||| |||||||||||||||||||||| || ||||||||    
T  3259201 aaaacctgttaaactcaaaatcagacttaaatagctacaatactgaggtaaacctcacccttaccttaattcagaatgaaaaatgcac 3259114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 37882369 - 37882435
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||| ||||||||    
T  37882369 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcaccattacctta 37882435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 52501422 - 52501525
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||  ||||||||| |||||||| |||   |  ||||| |||| |||||||||||||||||||||| || |||||||| | ||||| |||    
T  52501422 aaaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaattgaatt 52501521  T
Q  216 ctct 219  Q
    ||||    
T  52501522 ctct 52501525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 3265829 - 3265763
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  3265829 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 3265763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15325733 - 15325791
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  15325733 aaatgatgtatgcaaccagaacctatttctatcatcaaaacaacagtctctgcactcaa 15325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 29381968 - 29381886
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||||||||||||||||| |||   || ||||| |||| ||| |||||||||||||||||| || ||||||||    
T  29381968 ctgttaaacacaaaatcagaatttaataactacattattgaagtaaacctcatccttaccttaattcagaatgaaaaatgcac 29381886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 49240054 - 49239988
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  49240054 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 49239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 49748768 - 49748702
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  49748768 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 49748702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 50083092 - 50083166
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  50083092 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 50083166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 15004235 - 15004198
Alignment:
Q  218 cttggctcttctcccttttctcccaaaacttgtctgtt 255  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15004235 cttggctcttctcccttttttcccaaaacttgtctgtt 15004198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 26396559 - 26396648
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 205  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||||    
T  26396559 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcaccg 26396648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 5939841 - 5939885
Alignment:
Q  159 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||    
T  5939841 tgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 5939885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 13454594 - 13454634
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  13454594 tgtatgcactcagaacccatttctaacatcaaaacaacaat 13454634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 45958971 - 45958885
Alignment:
Q  96 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| |||| || ||| ||||||||| |||| ||||||||||||||    
T  45958971 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattaaaatatatactactgaagtaaacctcacccttacctta 45958885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 54825402 - 54825316
Alignment:
Q  96 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||    
T  54825402 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttacctta 54825316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 13454691 - 13454762
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||  ||||| ||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  13454691 aaacctgttaaaatcaaaaccagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 13454762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 16485505 - 16485568
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||| ||||||||  ||||||||| ||||| ||||||||||  ||| ||||||||||||||||    
T  16485505 aaatgttgtatgcaaccagaacctaattctaacatcaaaacagaaatctctacactcaattcac 16485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 20890245 - 20890308
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||||| |||| ||||||||| |||| | |||||||||||||    
T  20890245 ctgttaaacacaaaatcagaaattaatagctatactactgaagtaaacattacccttaccttaa 20890308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 23435189 - 23435122
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||||||  ||||  ||| ||||| |||| ||||||||||||||    
T  23435189 aaaacctgttaaactcaaaatcagaatttaaagtctacactattgaagtaaacctcacccttacctta 23435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 39265469 - 39265350
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa-ggagaaatgcaccggaattggat 214  Q
    |||||||||||||| |||||||||||| |||  ||||  ||| ||||| |||| |||||||||||||| || ||||  || |||||||| | ||  | ||    
T  39265469 aaaacctgttaaactcaaaatcagaatctaaagtctacactattgaagtaaacctcacccttaccttagtttagaattgaaaaatgcacagcaaaagaat 39265370  T
Q  215 tctcttggctcttctccctt 234  Q
    |||||||| |||||||||||    
T  39265369 tctcttggttcttctccctt 39265350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 634846 - 634812
Alignment:
Q  232 cttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    ||||||||||||||||||||||||| |||||||||    
T  634846 cttttctcccaaaacttgtctgttttcacgtaaaa 634812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 11938045 - 11938111
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  11938045 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 11938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20890143 - 20890176
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  20890143 tgtatgcactcagaacctatttctaacatcaaaa 20890176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20895770 - 20895803
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  20895770 tgtatgcactcagaacctatttctaacatcaaaa 20895803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 26076963 - 26076910
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||||  |||||| ||| |||| ||||| ||||||||||||||    
T  26076963 ccaaaatcagaatttagaatctatactaatgaaccaaacctcacccttacctta 26076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 31665826 - 31665859
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  31665826 tgtatgcactcagaacctatttctaacatcaaaa 31665859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 42955350 - 42955317
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  42955350 tgtatgcactcagaacctatttctaacatcaaaa 42955317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 1584781 - 1584849
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||    
T  1584781 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 1584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 15325835 - 15325899
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 180  Q
    ||||||| |||||| ||||||||||||| |  |||||| ||| |||||||||| |||||||||||    
T  15325835 aaaacctattaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacc 15325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16999472 - 16999420
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  16999472 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 16999420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 18165596 - 18165548
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacac 58  Q
    ||||||||  ||||||||| ||||| ||||||||||||||| |||||||    
T  18165596 tgtatgcaaccagaacctaattctaacatcaaaacaacaatctctacac 18165548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 42221208 - 42221248
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  42221208 tgtatacactcagaacctatttctaacatcagaacaacaat 42221248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 47870366 - 47870326
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  47870366 tgtatacactcagaacctatttctaacatcagaacaacaat 47870326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 3382 - 3111
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaacccaatttc 101  Q
    ||||| |||||||||||| |||||||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| |||||||| |   |||||||  ||    
T  3382 aaatgttgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaaagaattcaacata-aacccaaaatc 3284  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |  | |||| || | ||| ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  3283 ctcaatttcttccataaa-cctgttaaaccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgc 3185  T
Q  202 accggaattggattctcttgg----------ctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 265  Q
    || | ||||||||||||||||          ||||||||||||||||| |||||||||| ||||| ||||||||    
T  3184 acagaaattggattctcttggctctacttggctcttctcccttttctctcaaaacttgtatgttttcacgtaaa 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 325
Target Start/End: Complemental strand, 14278 - 13957
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaa-ccaagaattcaaaacctaacccaatttc 101  Q
    ||||| |||||||| | |||||||||||||| ||||| ||||  ||| |||||||||||||||| |||||| |||| ||||||| |   |||||||  ||    
T  14278 aaatgctgtatgcaatgagaacctatttctaacatcagaacagtaatctctacactcaattcactcaaaaatccaataattcaacata-aacccaaaatc 14180  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    || | ||||  | | ||| ||||||||| ||||||  ||||| || |||||| ||||||||| |||| |||||||||||||||| |||| | | ||||||    
T  14179 cccaatttctacca-aaatcctgttaaatcaaaataggaattcaacatctatactactgaagaaaacctcacccttaccttaatccagatgaacaaatgc 14081  T
Q  202 accggaattggattctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactccccttt 300  Q
    || | ||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    || ||||| |||| ||||||||||||||  |    
T  14080 acagaaatcggattcacttggctcttctcccttttctcccaaaacttgtctattt-cacgtaaaactgcttctgactgtttcttttcctaactccccaat 13982  T
Q  301 acataacccccttttaattcattta 325  Q
    ||||||| ||| |||| ||||||||    
T  13981 acataactcccctttatttcattta 13957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 325
Target Start/End: Original strand, 7111 - 7326
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 216  Q
    |||||||||||||| |||||||||||  |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||    
T  7111 aaacctgttaaacccaaaatcagaatccaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcacagaaattggattc 7210  T
Q  217 t----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttctttcctaactcccctttacataa 306  Q
    |          |||||||||||||||||||||||||||||   ||||||| |||||||||    || |||||  |  |||||||||||||||||||||||    
T  7211 tcttggctctacttggctcttctcccttttctcccaaaac---tctgttttcacgtaaaactgcttctgacttctcttttcctaactcccctttacataa 7307  T
Q  307 cccccttttaattcattta 325  Q
    | ||| |||| ||||||||    
T  7308 ctcccctttatttcattta 7326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 7015 - 7066
Alignment:
Q  12 tatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaat 63  Q
    |||||||||| |||||||||||| |||||||||| |||| ||||||||||||    
T  7015 tatgcactcaaaacctatttctaacatcaaaacagcaatctctacactcaat 7066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 118 - 266
Target Start/End: Original strand, 30780 - 30927
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 215  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||   ||||  | ||    
T  30780 aaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacttcacccttaccttaattcagaaagacaaatgcacaacaattcaggtt 30879  T
Q  216 ctcttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    | |||||||||||||||||||||||||||||   ||||||| |||||||||    
T  30880 cacttggctcttctcccttttctcccaaaac---tctgttttcacgtaaaa 30927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 123 - 256
Target Start/End: Original strand, 45450 - 45593
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc------ 216  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||| | | || |||||   ||||||||||          
T  45450 tgttaaaccaaaatcagaattcaatatctatactactgaagcaaatctcacccttaccttaattcagacgaacaattgcacgtaaattggattcacttgg 45549  T
Q  217 ----tcttggctcttctcccttttctcccaaaacttgtctgttt 256  Q
         |||||||||||||||||||| ||||||||||||||||||    
T  45550 ctctacttggctcttctcccttttcacccaaaacttgtctgttt 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 30667 - 30730
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||| ||||||||  ||||||||||||||| ||||| |||| |||| ||||||||||||||||    
T  30667 aaatgctgtatgcaaccagaacctatttctaacatcagaacagcaatctctacactcaattcac 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 11495 - 11451
Alignment:
Q  159 tgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| |||| |||||||||||||||||||||| || ||||||||    
T  11495 tgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 11451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 25014415 - 25014601
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    |||||||||||||| |||||||||||||||| ||||||| ||   || ||||||||| ||||||| |||||||||  |  ||||||||||||||| ||||    
T  25014415 aaatgatgtatgcaatcagaacctatttctaacatcaaaccagtgatttctacactctattcacccaaaaaccaaagaaccaaaacctaacccaaattcc 25014514  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    ||||||||||  |||| |  ||||||||||||||||||||| || |||||| ||||||||| |||| || |||||||||| |||||||    
T  25014515 caattttcatacagaacaa-tgttaaaccaaaatcagaattaaaaatctatactactgaagtaaacctcccccttaccttgattcaga 25014601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 184
Target Start/End: Complemental strand, 23443550 - 23443370
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttc 101  Q
    ||||| ||||||||  ||||||||||||||| |||||||||| |||| |||||||||||||||| |||||||| || ||| ||| |   |||||||  ||    
T  23443550 aaatgctgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactcaaaaacccaataatccaacata-aacccaaaatc 23443452  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    || | ||||  | | | ||||||||||| ||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  23443451 cccaatttctacca-ataacctgttaaatcaaaatcagaattcaatatctatactaccgaagcaaacctcacccttaccttaa 23443370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 7772877 - 7772764
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 220  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||||||||| |||||||||||||||||||||| || |||||||| | || || ||||||||    
T  7772877 ctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatgaattctctt 7772778  T
Q  221 ggctcttctccctt 234  Q
    || ||| |||||||    
T  7772777 ggttctcctccctt 7772764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 428158 - 428238
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  428158 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 428238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 15193317 - 15193131
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaa-cccaattt 100  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  ||||||||||||  | ||| |||||  |    
T  15193317 aaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaa--cttaaacccaaaat 15193220  T
Q  101 cccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    ||| | || |  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  15193219 ccccaattcctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcaga 15193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 21889529 - 21889601
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  21889529 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 21889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 18819739 - 18819923
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| ||||||||  ||||||||||||||| ||  ||||||   ||  |||||||||||||||| |||||||||  | |||||| ||||||||||||||    
T  18819739 aaatgttgtatgcaaccagaacctatttctaacactaaaacagtgattcctacactcaattcacccaaaaaccaatgaatcaaaatctaacccaatttcc 18819838  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    ||| ||||  | || |||| |||||||||||| |||||| |||  |||||  | | |||||||||| |||||||||||||||||||||    
T  18819839 caa-tttctaccag-aaacatgttaaaccaaattcagaa-ttacaatctacaccattgaagcaaacctcacccttaccttaattcaga 18819923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 21830469 - 21830601
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 216  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||  |||||||||||||||||||||| || ||||||||   |||| |||||    
T  21830469 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaatctcacccttaccttaattcagaaagacaaatgcacatcaatttgattc 21830568  T
Q  217 tcttggctcttct--cccttttctcccaaaact 247  Q
    |||||||||| ||  | ||||||||||||||||    
T  21830569 tcttggctctacttgctcttttctcccaaaact 21830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 19363502 - 19363583
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||| ||||||||||| |||  |||||| |||| ||||||||| ||||| ||||||||||||||||| | ||||||||    
T  19363502 ctgttaaatcaaaatcagaacttagaatctatactacagaagcaaacctcaccgttaccttaattcagaagcacaaatgcac 19363583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 20844004 - 20844073
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||||||||||||||| |||   || |||||||||| |||| ||||||||||||||||||    
T  20844004 tgttaaaccaaaatcagaatttaataactacattattgaagcaaacctcactcttaccttaattcagaag 20844073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 23544096 - 23544028
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||| ||||||||| |||||||||||||||  |||||| |||||||||||||| |||||||||||||||    
T  23544096 aaaaactgttaaactcaaaatcagaatttagaatctatactactgaagcaaacctcacccttaccttaa 23544028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 19799106 - 19799040
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  19799106 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 19799040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 22501865 - 22501956
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||| |||||| ||||  ||||| ||||||||| |||| |||||||||||||||||||||| || |||||||| | ||  ||||||||||||    
T  22501865 caaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaaaggattctcttgg 22501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 25420749 - 25420812
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  25420749 ctgttaaactcaaaatcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 25420812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 30781939 - 30782026
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| |||||||||||||| ||||||| || ||||||||    
T  30781939 aaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttagttcagaatgaaaaatgcac 30782026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6403813 - 6403759
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactca 61  Q
    |||||||||||||||||||||||||||| ||||| |||||||||  |||||||||    
T  6403813 tgatgtatgcactcagaacctatttctaacatcagaacaacaattcctacactca 6403759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 23075521 - 23075459
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  23075521 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23075459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 23081234 - 23081172
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||||||||    
T  23081234 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 28259138 - 28259044
Alignment:
Q  140 aatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctccctt 234  Q
    ||||| |||||||| ||||||||| |||  |||| ||||||||||||||||| || |||||||  | || |||||||||||||  ||||||||||    
T  28259138 aatttcatatctatactactgaagtaaaactcactcttaccttaattcagaatgaaaaatgcaaagcaaatggattctcttggtccttctccctt 28259044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 598148 - 598220
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  598148 caaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgagaaatgcac 598220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 18567462 - 18567530
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  18567462 aaaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 18567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 18940450 - 18940382
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| |||||||||||||||    
T  18940450 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttaccttaa 18940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 22006940 - 22006880
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||| |||||||| ||||  | |||||||||||||||| ||||||||||||||||||||||    
T  22006940 caaattcagaattcaataattgttctactgaagcaaacctcacccttaccttaattcagaa 22006880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 22508446 - 22508518
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||| |||||| ||||  ||||| ||||||||| |||| |||||||||||||||||||||| || ||||||||    
T  22508446 caaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 22508518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 23560808 - 23560732
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||| |||||||| |||||||||||||||| | |||  ||| |||||||||| |||||||||| ||||||||||||    
T  23560808 aaaacttgttaaactcaaaatcagaatttaaaaactacactattgaagcaaacctcacccttacattaattcagaag 23560732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 27635075 - 27635023
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||| |||||| |||| ||||||||| ||||||||||||||    
T  27635075 caaaatcagaatttaacatctatactaccgaagcaaacctcacccttacctta 27635023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 5455361 - 5455436
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  5455361 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 5455436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 14881549 - 14881462
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14881549 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14881462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 14888226 - 14888139
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  14888226 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 14888139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 19509040 - 19509127
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| ||||||||||| | |||| |||   || ||||| |||| |||||||||||||||||||||| || ||||||||    
T  19509040 aaaacctgttaaactcaaaatcagaaatcaataactacattattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 19509127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 24058523 - 24058586
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||| ||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  24058523 ctgttaaactcaaaagcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 24058586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 10687018 - 10687092
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  10687018 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 10687092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 16774284 - 16774222
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| ||| ||||||||||    
T  16774284 ctgttaaacacaaaatcagaaattaaaatctatactactgaagcaaacctcatccttacctta 16774222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 25847214 - 25847296
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  25847214 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 25847296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 25853795 - 25853877
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||||||||||||||||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  25853795 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 25853877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 30344767 - 30344697
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||||||    
T  30344767 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattcagaag 30344697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 5337590 - 5337518
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||   ||||||||||||||||||    
T  5337590 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaacccacccttaccttaattca 5337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 7772978 - 7772938
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  7772978 tgtatacactcagaacctatttctaacatcaaaacaacaat 7772938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 20991127 - 20991167
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  20991127 tgtatacactcagaacctatttctaacatcaaaacaacaat 20991167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 39608090 - 39608038
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||| ||||| |||||  ||||||||||||| |||||||||||||||    
T  39608090 aaaatcagaaattaatgtctataatactgaagcaaacctcacccttaccttaa 39608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 22247473 - 22247386
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  22247473 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 22247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 24008926 - 24009001
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| |||| ||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24008926 aaaacctgttaaactcaaattcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 24009001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 27635189 - 27635146
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||    
T  27635189 tgatgtatgtactcagaacctatttctaacatcagaacaacaat 27635146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 33536967 - 33537034
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| | |||| |||| ||| ||||| |||| ||||||||||||||    
T  33536967 aaaacctgttaaactcaaaatcagaaatcaataactatactattgaagtaaacctcacccttacctta 33537034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 20991228 - 20991290
Alignment:
Q  122 ctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||| |||||  ||| |||| ||||| ||||||||||||||| ||||||||||||||    
T  20991228 ctgttaaacccaaaatttgaaattaacatctactctactgaagcaaacctcacccttacctta 20991290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 24668222 - 24668156
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24668222 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 24736817 - 24736751
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24736817 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24736751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 24737991 - 24737925
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24737991 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24737925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 24750760 - 24750694
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||    
T  24750760 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattca 24750694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 43029915 - 43029981
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  43029915 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 43029981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 17938112 - 17938047
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  17938112 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 17938047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 21495838 - 21495910
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 190  Q
    ||||| |||||||||||||||||| |||  |||||| ||| || ||| |||| |||||||||||||||||||||    
T  21495838 aaaccggttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaacctcacccttaccttaattcaga 21495910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 22501754 - 22501787
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  22501754 tgtatgcactcagaacctatttctaacatcaaaa 22501787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 22508335 - 22508368
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  22508335 tgtatgcactcagaacctatttctaacatcaaaa 22508368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 29745925 - 29745892
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  29745925 tgtatgcactcagaacctatttctaacatcaaaa 29745892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 15462344 - 15462412
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||  |||||||||||||||||| |||  ||  ||||| |||| |||||||||||||||    
T  15462344 aaaacctgttaaatacaaaatcagaatttaataactacactcttgaagtaaacctcacccttaccttaa 15462412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 19801228 - 19801188
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  19801228 tgtatacactcagaacctatttctaacatcagaacaacaat 19801188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20341411 - 20341479
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||  |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20341411 aaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20348015 - 20348083
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||  |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20348015 aaaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20348083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 25420647 - 25420687
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  25420647 tgtatacactcagaacctatttctaacatcagaacaacaat 25420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 29745814 - 29745762
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||| |||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  29745814 caaattcagaaattaaaatctatactactgaagtaaacctcacccttacctta 29745762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 266
Target Start/End: Complemental strand, 2134 - 1981
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttg- 221  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||  | ||||||||| |||||     
T  2134 tgttaaaccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagaaggacaaatacatagtaattggattatcttgg 2035  T
Q  222 ---------gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
             |||||||||||||||||||||||||| |||||||| |||||||||    
T  2034 ctctacttcgctcttctcccttttctcccaaaactagtctgttttcacgtaaaa 1981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 2277 - 2039
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaatttcccaattt 108  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| || |   | |||||  |||| | ||    
T  2277 tgtatgcaaccagaacctatttctaacatcaaaacaacaatctctacactcaattcactcaaaaaccaagaattaaatataaaccccaaaatccccaatt 2178  T
Q  109 tcatctagaaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 207  Q
      |||    |||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| | |  |||||||   |    
T  2177 ctatcat--aaacctgttaaacccaaaatcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcagacgaacgaatgcacaaca 2080  T
Q  208 att-ggattctcttggctcttctcccttttctcccaaaact 247  Q
    |||  | ||| |||||| |||||||||||| ||||||||||    
T  2079 attctggttcacttggcccttctcccttttatcccaaaact 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 15785 - 16117
Alignment:
Q  5 aatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcc 102  Q
    |||| ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  |||||||||||| |   |||||||  |||    
T  15785 aatgttgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacata-aacccaaaatcc 15883  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgca 202  Q
    | | ||||  | | ||| ||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||| | | |||||||    
T  15884 ccaatttctaccataaa-cctgttaaaccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgca 15982  T
Q  203 ccggaat-tggat--------tct-cttggctcttct-cccttttctcccaaaacttgtctgtttgcacgtaaaagcaattt-tgactatttc-tttcct 289  Q
    |   ||| ||| |        ||| |||||||||||| |||||||||||||||||||||||||||||||||||||   |||| |||||||||| ||||||    
T  15983 cacaaatctggttcccttagctctacttggctcttctccccttttctcccaaaacttgtctgtttgcacgtaaaactgatttctgactatttcttttcct 16082  T
Q  290 aactcccctttacataacccccttttaattcattta 325  Q
    |||| |||  |||||||| ||| |||| ||||||||    
T  16083 aact-cccaatacataactcccctttatttcattta 16117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 28098 - 28343
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttc 101  Q
    ||||| ||||||||  ||||||||||||||| |||||||||| |||| ||||||||||| |||| |||||||| || ||| ||| |   |||||||  ||    
T  28098 aaatgttgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaaatcactcaaaaacccaataatccaacata-aacccaaaatc 28196  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaa-tcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatg 200  Q
    || | ||||  | | | ||||||||||| ||||| |||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  28197 cccaatttctacca-ataacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatg 28295  T
Q  201 caccggaatt-ggattctcttggctcttctcccttttctcccaaaact 247  Q
    ||| | ||||  | ||| ||||| ||||||||||||||||||||||||    
T  28296 cacagcaattcaggttcacttggttcttctcccttttctcccaaaact 28343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 325
Target Start/End: Original strand, 19336625 - 19336957
Alignment:
Q  5 aatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa--ccaagaattcaaaacctaacccaatttcc 102  Q
    |||| ||||||||||||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||  |||||||||||| |   |||||||  |||    
T  19336625 aatgttgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacata-aacccaaaatcc 19336723  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgca 202  Q
    | | ||||  | | ||| ||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||| | | |||||||    
T  19336724 ccaatttctaccataaa-cctgttaaaccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgca 19336822  T
Q  203 ccggaat-tggat--------tct-cttggctcttct-cccttttctcccaaaacttgtctgtttgcacgtaaaagcaattt-tgactatttc-tttcct 289  Q
    |   ||| ||| |        ||| |||||||||||| |||||||||||||||||||||||||||||||||||||   |||| |||||||||| ||||||    
T  19336823 cacaaatctggttcccttggctctacttggctcttctccccttttctcccaaaacttgtctgtttgcacgtaaaactgatttctgactatttcttttcct 19336922  T
Q  290 aactcccctttacataacccccttttaattcattta 325  Q
    |||| |||  |||||||| ||| |||| ||||||||    
T  19336923 aact-cccaatacataactcccctttatttcattta 19336957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 118 - 247
Target Start/End: Original strand, 21699070 - 21699200
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattc 216  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||| | | | |||||| | ||||  | |||    
T  21699070 aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcagatgaacagatgcacagaaattctggttc 21699169  T
Q  217 tcttggctcttctcccttttctcccaaaact 247  Q
     ||||||||||||||||||||||||||||||    
T  21699170 acttggctcttctcccttttctcccaaaact 21699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 31926626 - 31926445
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc-aagaattcaaaacctaacccaatttcccaatt 107  Q
    ||||||||||||||||||||||||| ||||||||||  ||| |||||||||||||||| |||||||| || | ||||| |   | |||||  |||| | |    
T  31926626 tgtatgcactcagaacctatttctaacatcaaaacagtaatttctacactcaattcactcaaaaacccaatagttcaacataaaccccaaaatccccaat 31926527  T
Q  108 ttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||  | | ||| ||||||||| ||||||||||||| || |||||  |||||||||||||| |||||||||||||||||||||    
T  31926526 ttctaccataaa-cctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaattcaga 31926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 266
Target Start/End: Complemental strand, 30490764 - 30490493
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaacccaatttc 101  Q
    ||||| |||||||||||||||| |||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| |||||||| |  ||||||||  ||    
T  30490764 aaatgttgtatgcactcagaacttatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaccaaagaattcaaca--taacccaaaatc 30490667  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    || |  |||  | | ||| ||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||  | | || |||    
T  30490666 cccaaattctaccataaa-cctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagttgaacaattgc 30490568  T
Q  202 accggaat-tggat--------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    ||   ||| ||| |        ||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30490567 acaaaaatctggttcacttggctctacttggctcttctcccttttcttccaaaacttgtctgtttgcacgtaaaa 30490493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 21409881 - 21409804
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 194  Q
    |||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  21409881 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaagga 21409804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 11140315 - 11140204
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||| |||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||| ||||| | |  |||||||   ||||||||||||||||    
T  11140315 tgttgaaccaaaatcagaattgaataactacactattgaagcaaacctcacccttaccttaaatcagatgaacgaatgcacaacaattggattctcttgg 11140216  T
Q  223 ctcttctccctt 234  Q
    ||||||||||||    
T  11140215 ctcttctccctt 11140204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 20850006 - 20850080
Alignment:
Q  125 ttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaat 199  Q
    |||| |||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||    
T  20850006 ttaatccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaat 20850080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 23713167 - 23713237
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||| |||||||||||||||||||    
T  23713167 aaacctgttaaaccaaaatcataattaaaaatctatactactgaagcaaacctcacccttaccttaattca 23713237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 36615856 - 36615937
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  36615856 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcac 36615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 43089307 - 43089388
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  43089307 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcac 43089388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 21921717 - 21921835
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| | || ||||||||| ||| ||||  |||||||| |||  |||||||||||||||||||||| || |||||||| | || ||||||    
T  21921717 aaaacctgttaaactccaattcagaatttcataactatattactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 21921816  T
Q  216 ctcttggctcttctccctt 234  Q
    ||||||| ||| |||||||    
T  21921817 ctcttggttctcctccctt 21921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 29601484 - 29601378
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| | || ||||||||| ||| |||| ||||||||| |||  |||||||||||||||||||||| || |||||||| | || ||||||    
T  29601484 aaaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 29601385  T
Q  216 ctcttgg 222  Q
    |||||||    
T  29601384 ctcttgg 29601378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 15315713 - 15315644
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||||| |||||||||||||||||| |||| ||| |||||||||  |||||||||||||||||||||||    
T  15315713 tgttaaatcaaaatcagaatttaataactatactattgaagcaaatctcacccttaccttaattcagaag 15315644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 23634484 - 23634569
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||||||||||||||| || |||||| ||||  |||||||| ||||||||||||||||| ||| | | ||||||||    
T  23634484 aaacctgttaaaccaaaatcagaattaaaaatctatactaccaaagcaaacctcacccttaccttaatttagatgaacaaatgcac 23634569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 16882864 - 16882789
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaaccaagaattcaa 85  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||||| || ||| |||||||||    
T  16882864 tgtatgcactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaatacctagaattcaa 16882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 36918047 - 36918117
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||||    
T  36918047 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcagaa 36918117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 20076137 - 20076062
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| ||||||||||| | || |||||| ||||||||| |||| |||||||||||||| |||||||    
T  20076137 aaaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaccttagttcagaa 20076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 21409994 - 21409931
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||| ||||||||  ||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  21409994 aaatgttgtatgcaaccagaacctaattctaacatcaaaacaacaatctctacactcaattcac 21409931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 24080514 - 24080580
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||    
T  24080514 aaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 24080580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 24237619 - 24237556
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  24237619 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 24237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 48428776 - 48428863
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||| ||||| |||||  ||||| ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  48428776 aaaacctgttaaactcaaattcagactttaaattctatactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 48428863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 21963911 - 21964003
Alignment:
Q  96 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag 189  Q
    |||||||||||||||| | |||| || |||||||| ||||||||||| || | |||||| ||||||||| |||| ||||||||||||||||||||    
T  21963911 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttaattcag 21964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 24108326 - 24108277
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    |||||||| ||||||||||||||||||| ||||||||||||||| |||||    
T  24108326 tgatgtatacactcagaacctatttctaacatcaaaacaacaatctctac 24108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 47485046 - 47485099
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  47485046 caaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 47485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20293601 - 20293669
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20293601 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20300232 - 20300300
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20300232 aaaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20300300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 19045494 - 19045407
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||| | ||| ||| |||||  ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  19045494 aaaacctgttaaactcaaaataaaaatctaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 19045407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 29553664 - 29553597
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||||||||   |||| |||| |||||||||||||| ||||||||||||||    
T  29553664 aaaacctgttaaactcaaaatcagaacacaataactatactactgaagcaaacctcacccttacctta 29553597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 20396104 - 20396022
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||| |||||||| ||||||||| |||   || ||||| |||| |||||||||||||||||||||| || ||||||||    
T  20396104 ctgttaaacacaaaatcaaaatttaatagctacaatattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 20396022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 20849891 - 20849957
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 75  Q
    ||||||||  ||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  20849891 tgtatgcaagcagaacctaattctaacatcagaacaacaatctctacactcaattcactcaaaaacc 20849957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 234
Target Start/End: Complemental strand, 21733737 - 21733507
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| ||||||||  ||||||||||||||| ||| |||||||  ||  ||||||| |||||| ||||||| |||  | |||||| ||||||||| ||||    
T  21733737 aaatgttgtatgcaaccagaacctatttctaacattaaaacaatgattcctacactaaattcacccaaaaatcaaagaatcaaaatctaacccaaattcc 21733638  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaa-gcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    ||||||  | |    |||| ||||||||||||||||||| |||  |||||  ||| |||| |||||| ||| ||||||||||| ||||| | | |||| |    
T  21733637 caatttctacc--ataaacatgttaaaccaaaatcagaa-ttacaatctacactattgaaggcaaacctcagccttaccttaaatcagatgaacaaattc 21733541  T
Q  202 -accggaattggattctcttggctcttctccctt 234  Q
     || ||| |  | |||||||||||||||||||||    
T  21733540 tacaggattctggttctcttggctcttctccctt 21733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 23194576 - 23194506
Alignment:
Q  124 gttaaaccaaaatcagaatt-taata-tctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||||||||| ||||| ||||  ||| |||||||||| |||||||||||| ||||||||||    
T  23194576 gttaaaccaaaatcagaattataataatctacactattgaagcaaacctcacccttacctgaattcagaag 23194506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31534492 - 31534426
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  31534492 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 31534426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 31563209 - 31563143
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  31563209 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 31563143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 36211242 - 36211168
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  36211242 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcagaa 36211168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 49328959 - 49329025
Alignment:
Q  121 cctgttaaaccaaaat-cagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||||| |||| |||||||| |||||||| ||||||||| |||  |||||||||||||||||    
T  49328959 cctgttaaacccaaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaatt 49329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 19860021 - 19860061
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  19860021 tgtatgcactcagaacctatttctaacatcagaacaacaat 19860061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20571666 - 20571734
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  20571666 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20571734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 21665033 - 21665081
Alignment:
Q  14 tgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  21665033 tgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 21665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 29150429 - 29150361
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||    
T  29150429 aaaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 29150361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 18419050 - 18419137
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||  ||||||||||||| |||| |||   |  ||||| |||| |||||||||||||||||||||| || ||||||||    
T  18419050 aaaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 18419137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 39188869 - 39188802
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||||||| |||||  ||||| ||| ||||| |||| ||||||||||||||    
T  39188869 aaaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaacctcacccttacctta 39188802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 6741442 - 6741508
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  6741442 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 6741508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 37676331 - 37676397
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  37676331 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 37676397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 37683002 - 37683068
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| |||||||||| ||||| ||||| |||| ||||| ||||  |||||||||||||    
T  37683002 aaacctgttaaactcaaaatcagactttaaaatctactctattgaagtaaaccccacccttacctta 37683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 47484935 - 47484981
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| |||||    
T  47484935 tgtatgcactcagaacctatttctaacatcagaacaaaaatctctac 47484981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 5381600 - 5381672
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 190  Q
    |||| ||||||||||||||||||| |||  |||||| ||| || ||| |||| |||||||||||||||||||||    
T  5381600 aaacatgttaaaccaaaatcagaa-ttacaatctatactattgaaagtaaacctcacccttaccttaattcaga 5381672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 9292621 - 9292670
Alignment:
Q  135 atcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||| |||| |||||| ||||||||| |||| |||||||||||||||    
T  9292621 atcagaaattaaaatctatactactgaagtaaacctcacccttaccttaa 9292670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 19853890 - 19853926
Alignment:
Q  14 tgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  19853890 tgcactcagaacctatttctaacatcagaacaacaat 19853926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 20837415 - 20837363
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||| |||||||| | ||||||| ||| |||||||||| ||||||||||||||    
T  20837415 caaattcagaattcagtatctatactaatgaagcaaacctcacccttacctta 20837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 21735990 - 21736030
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||||||||||| ||||| ||| |||||    
T  21735990 tgtatgcactcagaacctatttctaacatcagaaccacaat 21736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 23065989 - 23065937
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| ||  ||||| ||||| |||||    
T  23065989 tgtatgcactcagaacctatttctatcatcagaatcacaatctctactctcaa 23065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 119 - 265
Target Start/End: Original strand, 19036456 - 19036613
Alignment:
Q  119 aacctgttaaaccaaaa-tcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 217  Q
    ||||||||||| ||||| |||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||| ||||    
T  19036456 aacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggacaaatgcactgaaattggtttct 19036555  T
Q  218 ----------cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaa 265  Q
              ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19036556 cttggctctacttggctcttctcccttttctcccaaaacttgtctgtgttcacgtaaa 19036613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 8889172 - 8889040
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggatt 215  Q
    |||||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||   ||||  | ||    
T  8889172 aaacctgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaatttagaaggacaaatgcacatcaattcaggtt 8889073  T
Q  216 ctcttggctcttctcccttttctcccaaaactt 248  Q
    | ||||| |||||||||||||||||||||||||    
T  8889072 cacttggttcttctcccttttctcccaaaactt 8889040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 25106779 - 25106554
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    ||||||||||||||||||||||||  |||||||||| |||| ||||||||||| ||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  25106779 tgtatgcactcagaacctatttctgacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 25106680  T
Q  108 ttcatctagaaaacctgttaaa--ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 205  Q
    ||  | |   ||||||||||||  | |||||||||||| |  |||||  ||||||||| |||| |||||||||||||||||||||| || || |||||      
T  25106679 ttattat---aaacctgttaaaatcaaaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaattcagaaagacaattgcacaa 25106583  T
Q  206 gaattggattctcttggctcttctccctt 234  Q
      || ||||||| ||||||||||||||||    
T  25106582 tgatcggattcttttggctcttctccctt 25106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 20648939 - 20649135
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaacccaat-ttccca 104  Q
    |||||||||||  ||||||||| ||||| ||||| ||||||||| |||| ||||||||||| |||||||| | ||| ||| |   | |||||  ||||||    
T  20648939 tgatgtatgcaaccagaacctaattctaacatcagaacaacaatttctatactcaattcactcaaaaacccataatccaacataaaccccaaaattccca 20649038  T
Q  105 attttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||| | |||    |||||||||||| |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||| || ||||||||    
T  20649039 attct-atcat--aaacctgttaaatccaaaatcagaattaaataactatactactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 20649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 23753654 - 23753729
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattca 84  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||| ||||||||    
T  23753654 tgtatgcactcagaacctatttctaacatcagaacaacaatttctacactcaattcacccaaaaacctagaattca 23753729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 25268068 - 25268252
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaaccaagaattcaaaacctaaccc--aatttcccaat 106  Q
    ||||||||  ||||||||||||||| ||||| |||| |||| | |||||||||||||| |||||||| |  | || || | ||||||  |||||||||||    
T  25268068 tgtatgcaaccagaacctatttctaacatcagaacatcaatctatacactcaattcactcaaaaacccattaatccaa-cataaccccaaatttcccaat 25268166  T
Q  107 tttcatctagaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagga 194  Q
    | | |||    |||||||||||| |||||||||||||| || | |||| |||||||||||||| |||||||||||||||||||||||||    
T  25268167 tct-atcat--aaacctgttaaatccaaaatcagaattcaaaaactatactactgaagcaaacctcacccttaccttaattcagaagga 25268252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 20913530 - 20913463
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| |||||    
T  20913530 tgttaaaccaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaaatcaga 20913463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 219
Target Start/End: Complemental strand, 22012345 - 22012242
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  22012345 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 22012246  T
Q  216 ctct 219  Q
    ||||    
T  22012245 ctct 22012242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 23291897 - 23291963
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  23291897 aaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 23291963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 23333537 - 23333603
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  23333537 aaacctgttaaaatcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 23333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 22860941 - 22861058
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 216  Q
    ||||||||||||  ||||||||||||| || | ||||  ||||||||||||  |||||||||||||||||||||| || ||||| ||    || |||||     
T  22860941 aaacctgttaaaatcaaaatcagaattcaacaactatattactgaagcaaatctcacccttaccttaattcagaaagacaaatgtacaacgatcggatta 22861040  T
Q  217 tcttggctcttctccctt 234  Q
    |||| |||||||||||||    
T  22861041 tctttgctcttctccctt 22861058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 35243768 - 35243683
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||||||||| ||||||||||| | |||| |||  ||| ||||| |||| |||||||||||||||||||||| || ||||||    
T  35243768 aaaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgc 35243683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 25174862 - 25174906
Alignment:
Q  148 atctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  25174862 atctatactactgaagcaaacctcacccttaccttaattcagaag 25174906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 32910696 - 32910624
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  32910696 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 32910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 22812954 - 22813021
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  22812954 aaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 22813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 23887599 - 23887512
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||| ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  23887599 aaaacctgttaaactcaaaatcagactttaatttctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 23887512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 14564760 - 14564822
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||    
T  14564760 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttacctta 14564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 17582687 - 17582617
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||| |||| |||||| |||| |||||| ||| ||||| |||| ||||||||||||||||||||||    
T  17582687 ctgttaaactcaaactcagaaattaaaatctatactattgaagtaaacctcacccttaccttaattcagaa 17582617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 22860834 - 22860900
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 75  Q
    ||||||||  ||||||||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||    
T  22860834 tgtatgcaaccagaacctaattctaacatcagaacaacaatctctacactcaattcactcaaaaacc 22860900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 15642505 - 15642437
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| || |||||||| |||||| |||| ||| ||||| |||| |||||||||||||||    
T  15642505 aaaacctgttaaactcacaatcagaaattaataactatactattgaagtaaacctcacccttaccttaa 15642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 19648744 - 19648688
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  19648744 aaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 19648688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 20851116 - 20851184
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| ||||  ||||||||||||||    
T  20851116 aaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttaccttaa 20851184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 28970468 - 28970416
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||||| | |||| |||| ||||||||| ||||||||||||||    
T  28970468 caaaatcagaatttaacacctatactaccgaagcaaacatcacccttacctta 28970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 8889285 - 8889222
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    ||||| ||||||||  || |||||||||||  |||||||||| |||| ||||||||||||||||    
T  8889285 aaatgctgtatgcaaccataacctatttctcacatcaaaacagcaatctctacactcaattcac 8889222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 21605670 - 21605757
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  21605670 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 21605757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 27038168 - 27038235
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||||||||| ||| |||||  ||| ||||| |||| ||||||||||||||    
T  27038168 aaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttacctta 27038235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 30195715 - 30195652
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| |||||||||||||||| |||||  ||| ||||| |||| |||||||||||||||    
T  30195715 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 30195652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 20724872 - 20724914
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaa 46  Q
    ||||||||||||||  ||||||||||||||| |||||||||||    
T  20724872 aaatgatgtatgcaaccagaacctatttctaacatcaaaacaa 20724914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 27272979 - 27273012
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaa 43  Q
    ||||||||||||||||||||||||| ||||||||    
T  27272979 tgtatgcactcagaacctatttctaacatcaaaa 27273012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 45029344 - 45029401
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||  ||||| ||||| |||||||||||||  |||||||||||| ||||||    
T  45029344 caaaatcagagattaatgtctatactactgaagcaaatctcacccttacctgaattca 45029401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 19648856 - 19648816
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  19648856 tgtatgtactcagaacccatttctaacatcaaaacaacaat 19648816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 27366601 - 27366549
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||| ||||||||||||| ||||  ||||||||||||  ||||||||||||||    
T  27366601 caaattcagaatttaataactatattactgaagcaaatctcacccttacctta 27366549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 28970579 - 28970539
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  28970579 tgtatgtactcagaacctatttctaacatcagaacaacaat 28970539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 2348 - 2485
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattct 217  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | || |||||   |||  | |||     
T  2348 aaacctgttaaaccaaaatcagaattaaacatctacactactgaagtaaacatcacccttaccttaattcagatgaacaattgcacaaaaatctggttca 2447  T
Q  218 cttggctcttctcccttttctcccaaaacttgtctgtt 255  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2448 cttggctcttctcccttttctcccaaaacttgtctgtt 2485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 96 - 171
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    |||||||||||||| ||||||||||| | || |||||| ||||||||| |||| ||||||||| |||| |||||||    
T  96 aaaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaacttagttcagaa 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 2234 - 2317
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaa 85  Q
    ||||| || |||||||||||||||||||||| ||||||| ||   ||  ||||||||||||||||  |||| ||||||||||||    
T  2234 aaatgttgcatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaa 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 10 - 247
Target Start/End: Original strand, 77584 - 77823
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca--ccaaaaaccaagaattcaaaacctaa-cccaatttcccaat 106  Q
    ||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||  | |||| |||| ||||||   ||||| |||||  |||| |     
T  77584 tgtatgcacccagaacctatttctaacatcaaaacaacaatctctacactcaattcagtcaaaaacccaataattcat--cctaaacccaacatccccaa 77681  T
Q  107 tttcatctagaaaacctgttaaaccaaaatcagaattt-aatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccg 205  Q
    ||||  | | | ||||||||||| ||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||| | |  |||||||      
T  77682 tttctacca-ataacctgttaaatcaaaatcagaaattcaaaatctattctactgaagcaaacctcacccttaccttaattcagacgaacgaatgcacaa 77780  T
Q  206 gaatt-ggattctcttggctcttctcccttttctcccaaaact 247  Q
     ||||  | ||| |||| |||||||||||||||||||||||||    
T  77781 caattctggttcacttgactcttctcccttttctcccaaaact 77823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 72063 - 72115
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  72063 caaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 72115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 3842 - 3953
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||||| |||||||||||||| |||| |||  ||| |||||||||| ||||| ||||||||||||||||||| |||||||| | ||||||||||||||||    
T  3842 tgttaagccaaaatcagaattaaataactacactattgaagcaaacctcaccattaccttaattcagaaggaaaaatgcacagcaattggattctcttgg 3941  T
Q  223 ctcttctccctt 234  Q
    ||||||||||||    
T  3942 ctcttctccctt 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 587 - 401
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaaccc---aatt 99  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||  |||  |||||||||||||||| |||||||||||||||||  | ||| ||   || |    
T  587 aaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa--cttaaaccccaaaat 490  T
Q  100 tcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||  | |    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  489 tcccaatttctaccat--aaacctgttaaaccaaaatcagaattaaacatctatactactgaagcaaacctcacccttaccttaattcaga 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 363 - 257
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||| |||||||||  |  ||||||||||||||||||| || |||||||||| |||||||||| |||  |||||||| ||| |||    
T  363 cttggctcttctccctttttctcccaaaagct--ctgtttgcacgtaaaagcagttctgactatttcttttcctaact-cccaatacataactccccttt 267  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  266 atttcattta 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 663 - 407
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaa-accaagaattcaaaacctaacccaatttcccaattt 108  Q
    |||||||||||||||| |||||||| ||||||||||  |||  |||||||||||||||| ||| |||||||||||||     | |||||  |||| | ||    
T  663 tgtatgcactcagaacgtatttctaacatcaaaacagtaattcctacactcaattcacccaaacaccaagaattcaacttaaaccccaaaatccccaatt 564  T
Q  109 tcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaa 208  Q
     |  | | ||| |||||||||||||||||||||||  | |||||| |||||||||||||| ||||||||||||||||||||| | | |||||||| | ||    
T  563 cctaccataaa-cctgttaaaccaaaatcagaattagacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaaatgcacagaaa 465  T
Q  209 ----------ttggattctcttggctcttctcccttttctcccaaaacttgtctgttt 256  Q
              |||| ||  |||||||||||||||||||||||||||||||| ||||||    
T  464 tctggttcacttggctttacttggctcttctcccttttctcccaaaacttgactgttt 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 4708 - 4510
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacct-aacccaatttc 101  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||   || ||||||||||||||| |||||||||||||||||  ||| | |||||||  ||    
T  4708 aaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaaaaccaagaattc--aacttaaacccaaaatc 4611  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    || | ||||  | |  |||| ||||||| ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||||| | | ||||||    
T  4610 cccaatttctacca-taaacatgttaaatcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgc 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 19890 - 19692
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacct-aacccaatttc 101  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||   || ||||||||||||||| |||||||||||||||||  ||| | |||||||  ||    
T  19890 aaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaaaaccaagaattc--aacttaaacccaaaatc 19793  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    || | ||||  | |  |||| ||||||| ||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||||| | | ||||||    
T  19792 cccaatttctacca-taaacatgttaaatcaaaatcagaattaaaaatcgatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgc 19694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 18787060 - 18787162
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctcc 231  Q
    |||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  18787060 aaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagaaggaaaaatgcacaacaattggattctcttggctcttctcc 18787159  T
Q  232 ctt 234  Q
    |||    
T  18787160 ctt 18787162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 255
Target Start/End: Complemental strand, 22797837 - 22797586
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttc 101  Q
    ||||| ||||||||  ||||||||||||||| |||||||| |  |||  ||||| |||||||||| |||||||||||||||||     | |||||  |||    
T  22797837 aaatgctgtatgcaaccagaacctatttctaacatcaaaatagtaattcctacattcaattcacccaaaaaccaagaattcaacttaaaccccaacattc 22797738  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    |||||||  | |    |||| |||||||| |||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | || |||    
T  22797737 ccaatttctaccat--aaacttgttaaacgaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaattgc 22797640  T
Q  202 accggaattggattctcttggctcttctcccttttctcccaaaacttgtctgtt 255  Q
    ||   |||  | ||| ||||||||||||||||||||||||||||||||||||||    
T  22797639 acaaaaatctggttcacttggctcttctcccttttctcccaaaacttgtctgtt 22797586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 266
Target Start/End: Original strand, 24721566 - 24721707
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattctcttg 221  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| |||||||  | ||||  | ||| ||||    
T  24721566 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaaggaaaaatgcatagcaattcaggttcacttg 24721665  T
Q  222 gctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    | |||||||||||||||||||||||   ||||||| |||||||||    
T  24721666 gttcttctcccttttctcccaaaac---tctgttttcacgtaaaa 24721707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 10469962 - 10469844
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  10469962 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 10469863  T
Q  216 ctcttggctcttctccctt 234  Q
    ||||||| |||||||||||    
T  10469862 ctcttggttcttctccctt 10469844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 13127510 - 13127392
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggatt 215  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||||| || |||||||| | || ||||||    
T  13127510 aaaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcacagcaaatggatt 13127411  T
Q  216 ctcttggctcttctccctt 234  Q
    ||||||| |||||||||||    
T  13127410 ctcttggttcttctccctt 13127392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 18315181 - 18315109
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||    
T  18315181 aaacctgttaaaccaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcaga 18315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 23020588 - 23020487
Alignment:
Q  122 ctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaatt-ggattctctt 220  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||||||||||||||| | |||||||| |||||| |||||| |||    
T  23020588 ctgttaaatcaaaatcagaacttagaatctatactactgaagcaaacctcacccttaccttaattcagaagcacaaatgcacaggaattcggattccctt 23020489  T
Q  221 gg 222  Q
    ||    
T  23020488 gg 23020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 14615499 - 14615432
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  14615499 aaaacctgttaaactcaaaatcagaattcaatatctatactactgaagcaaacctcacccttacctta 14615432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 19468689 - 19468870
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactc-aattcaccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    ||||||||||||||||||||||||| || || ||||||||| ||||||||| ||||  ||||||||| ||||||||| |   | ||| || |||||||||    
T  19468689 tgtatgcactcagaacctatttctaacaccagaacaacaatctctacactcaaattacccaaaaacctagaattcaacataaaccccaaaattcccaatt 19468788  T
Q  108 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
     | |  |||   ||||||| ||| |||||||||||||||  | |||  ||| |||||||||| ||||||||||||||||||||||    
T  19468789 ctaacatag---acctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttaccttaattcagaa 19468870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 23232631 - 23232522
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattc 216  Q
    ||||||||||||  ||||||||| ||| | || |||  ||| |||||||||| |||||||||||||||||||||| || ||||||||   |||| |||||    
T  23232631 aaacctgttaaaatcaaaatcagcattcattaactacactattgaagcaaacctcacccttaccttaattcagaaagacaaatgcacaacaatttgattc 23232532  T
Q  217 tcttggctct 226  Q
    ||||||||||    
T  23232531 tcttggctct 23232522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 27768281 - 27768348
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||||||| |||| ||||||||||||||    
T  27768281 aaaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 27768348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 10582608 - 10582547
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||||||||||   | |||||| |||||||||||||| |||||||||||||||||||||||    
T  10582608 caaaatcagaatcagacatctatactactgaagcaaacctcacccttaccttaattcagaag 10582547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 14132356 - 14132299
Alignment:
Q  5 aatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    |||| ||||| ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  14132356 aatgttgtatacactcagaacctatttctaacatcaaagcaacaatctctacactcaa 14132299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 1071601 - 1071705
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa-ggagaaatgcaccggaattggattctcttggctcttct 229  Q
    ||||||||||  ||||| ||||| |||||||||||||| |||||||||||||| || ||||  || |||||||| | ||  | |||||||||| ||||||    
T  1071601 caaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagtttagaattgaaaaatgcacagcaaaagaattctcttggttcttct 1071700  T
Q  230 ccctt 234  Q
    |||||    
T  1071701 ccctt 1071705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 13941354 - 13941426
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| | || ||||||||| |||||||| ||||||||| |||  |||||||||||||||||||    
T  13941354 aaaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 13941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 24363488 - 24363563
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24363488 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 24363563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 24370079 - 24370154
Alignment:
Q  117 aaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaa 191  Q
    ||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||| |||||||    
T  24370079 aaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcagaa 24370154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 29926618 - 29926685
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||||| |||  ||| |||||||||| ||||||||||||||    
T  29926618 aaaacctgttaaactcaaaatcagaagttaataactacactattgaagcaaacctcacccttacctta 29926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 18315070 - 18315003
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttcttt 286  Q
    ||||||||||||||||||| |||||||||  |  ||||||||||||||||||| || |||||||||||||    
T  18315070 cttggctcttctccctttttctcccaaaagct--ctgtttgcacgtaaaagcagttctgactatttcttt 18315003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 25464764 - 25464830
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||| ||| ||||| |||| ||||||||||||||    
T  25464764 aaaacctgttaaactcaaatcagactttaaaatctatactattgaagtaaacctcacccttacctta 25464830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 19587799 - 19587731
Alignment:
Q  117 aaaacctgttaaacc--aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||   ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||    
T  19587799 aaaacctgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcacccttacctta 19587731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 23106131 - 23106191
Alignment:
Q  83 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaattt 144  Q
    ||||||||||||||| ||||||||||||||  |||| | | |||||||||||||||||||||    
T  23106131 caaaacctaacccaaattcccaattttcatacagaacaac-gttaaaccaaaatcagaattt 23106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 23234239 - 23234199
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  23234239 tgtatgcactcagaacccatttctaacatcaaaacaacaat 23234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 5289145 - 5289070
Alignment:
Q  118 aaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||||||| ||||| ||||  |||  ||||||| ||||  |||||||||||||||||||||||    
T  5289145 aaacctgttaaatccaaaatccgaattcaataagtatattactgaaacaaatctcacccttaccttaattcagaag 5289070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 14374570 - 14374519
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||| ||| |||||||||| ||||||||||||||    
T  14374570 aaaatcagaatttagaatctatactaatgaagcaaacctcacccttacctta 14374519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 15331345 - 15331258
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  15331345 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 15331258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 17310588 - 17310675
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||||||| |||||  ||||  | | ||||| ||||  ||||||||||||||||||||| || ||||||||    
T  17310588 aaaacctgttaaactcaaaatcagactttaaattctacaccattgaagtaaaccccacccttaccttaattcagaatgaaaaatgcac 17310675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 17414861 - 17414896
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaaca 45  Q
    ||||||||||||||||||||||||| ||||||||||    
T  17414861 tgtatgcactcagaacctatttctaacatcaaaaca 17414896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 17206964 - 17206903
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||    
T  17206964 ctgttaaactcaaaatcagaaattaatgtctatactactg-agcaaacctcacccttacctta 17206903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 19587902 - 19587844
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||||| | ||| |||||||    
T  19587902 aaatgttgtatgcaaccagaacctatttctaacatcaaaacaacagtctctgcactcaa 19587844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 19819742 - 19819792
Alignment:
Q  12 tatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||| |||||  ||||||||  ||||||||||    
T  19819742 tatgcactcagaacctatttctaacatcaggacaacaattcctacactcaa 19819792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 26417879 - 26417809
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattc-tactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||||||||  ||||||||||| |||| |||| | |||||||| |||  |||||||||||||||||    
T  26417879 aaaacctgttaaactcaaatcagaattcaatacctatacttactgaagtaaaactcacccttaccttaatt 26417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 33875876 - 33875942
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  33875876 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 33875942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 34133185 - 34133120
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||| ||||||||||| | |||| ||||  |||||||| |||| |||||||||||||||||    
T  34133185 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 34133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 13127594 - 13127558
Alignment:
Q  20 cagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  13127594 cagaacctaattctaacatcaaaacaacaatatctac 13127558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 24563440 - 24563492
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||| ||||||||||||| ||||  ||||||||||||  ||||||||||||||    
T  24563440 caaattcagaatttaataactatattactgaagcaaatctcacccttacctta 24563492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 4315 - 4098
Alignment:
Q  13 atgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaattttc 110  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| |   | |||||  |||||||||  |    
T  4315 atgcactcagaacctatttctaacatcaaaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattc-c 4217  T
Q  111 atctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat 209  Q
    |||    ||||||||||||  |||||||||||||| | | ||||  ||||||||||||| ||||| |||||||||||||||| || ||||||||    ||    
T  4216 atcat--aaacctgttaaaatcaaaatcagaatttcacaactatattactgaagcaaacctcaccattaccttaattcagaaagacaaatgcacaacgat 4119  T
Q  210 tggattctcttggctcttctc 230  Q
     ||||||||||||||||||||    
T  4118 cggattctcttggctcttctc 4098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 2266 - 2370
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttct 229  Q
    |||||||||||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||||| ||||||||    || |||||||||||||||||||    
T  2266 ccaaaatcagaattaaatatctacactactgaagtaaacatcacccttaccttaattcagaaggacaaatgcacaacgatcggattctcttggctcttct 2365  T
Q  230 ccctt 234  Q
    |||||    
T  2366 ccctt 2370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 731 - 837
Alignment:
Q  83 caaaacctaacccaatttcccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctt 182  Q
    ||||||||||||||| ||||||||||||||  |||| |  |||||||||||||||||||||||| |||||| ||||||||| | || |||||||||||||    
T  731 caaaacctaacccaaattcccaattttcatacagaacaa-tgttaaaccaaaatcagaatttaaaatctatactactgaagtatacctcacccttacctt 829  T
Q  183 aattcaga 190  Q
    ||||||||    
T  830 aattcaga 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 14461 - 14646
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcc 102  Q
    ||||| ||||||||  ||||||||||||||| ||||||||||    | ||||| |||||| |||| ||||| |||  |  ||||||||||||||| ||||    
T  14461 aaatgctgtatgcaaccagaacctatttctaacatcaaaacatggtt-tctaccctcaatccacccaaaaatcaaagaaccaaaacctaacccaaattcc 14559  T
Q  103 caattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
     |||||||||  |||| |  |||||||||||||||||||||||| ||||||  |||||||| |||| |||||||||||||||||||||    
T  14560 aaattttcatacagaacaa-tgttaaaccaaaatcagaatttaaaatctatattactgaagtaaacctcacccttaccttaattcaga 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 17002 - 17115
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctctt 220  Q
    ||||||||| |||||| |||| |||| ||||| ||||||||||||||| |||||||||||||||||||||| || ||||||||   ||||||||||||||    
T  17002 ctgttaaactcaaaattagaaattaacatctactctactgaagcaaacctcacccttaccttaattcagaatgaaaaatgcacatcaattggattctctt 17101  T
Q  221 ggctcttctccctt 234  Q
    || ||| |||||||    
T  17102 ggttctcctccctt 17115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 16901 - 16941
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  16901 tgtatacactcagaacctatttctaacatcaaaacaacaat 16941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 266
Target Start/End: Original strand, 46363 - 46629
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaaccta-acccaatttc 101  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||   |  |||||||||||||||| ||||| |||  | ||||| |||| |||||| |||    
T  46363 aaatgttgtatgcactcagaacctatttctaacaccaacacaatggttcctacactcaattcacccaaaaatcaaagaatcaaa-cctagacccaaattc 46461  T
Q  102 ccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgc 201  Q
    ||||||   | |    |||||| ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||| | | || | |    
T  46462 ccaattcctaccat--aaacctattaaaccaaaatcagaatt-aatatctatactactgaagtaaacctcacccttaccttaattcagatgaacaatttc 46558  T
Q  202 accggaat-tgg---attct-cttggctcttctccc-ttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
    ||   ||| |||   | ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46559 acaaaaatctggttcactctacttggctcttctccctttttctcccaaaacttgtctgtttgcacgtaaaa 46629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 21978 - 21820
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggat-- 214  Q
    |||||||||||| ||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | |||||||| | ||| ||| |      
T  21978 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcacagaaatctggttca 21879  T
Q  215 ------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
          ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21878 cttggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 21820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 266
Target Start/End: Complemental strand, 26175 - 26017
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaat-tggat-- 214  Q
    |||||||||||| ||||||||||||| || |||||  ||||||||| |||| ||||||||||||||||||||| | | |||||||| | ||| ||| |      
T  26175 aaacctgttaaatcaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcagatgaacaaatgcacagaaatctggttca 26076  T
Q  215 ------tct-cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaa 266  Q
          ||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26075 cttggctctacttggctcttctcccttttctcccaaaacttgtctgttttcacgtaaaa 26017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 9e-24; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 56088 - 55847
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaacccaatttcccaattt 108  Q
    ||||||||  ||||||||||||||| |||| ||||| |||| ||||||||||||||| ||||||||| |  || | |     ||||||| ||||||||||    
T  56088 tgtatgcaaccagaacctatttctaacatcgaaacagcaatctctacactcaattcacccaaaaacccattatcccatcataaacccaaattcccaattt 55989  T
Q  109 tcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccgga 207  Q
      | |   | ||| |||| ||| ||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||  || |||||||| | |    
T  55988 ctaac--aataacttgttaaaatcaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagatagacaaatgcacagca 55891  T
Q  208 att-ggattctcttggctcttctcccttttctcccaaaacttgt 250  Q
     ||  | ||| ||||| |||||||||||||||||||||||||||    
T  55890 gttcaggttcacttggttcttctcccttttctcccaaaacttgt 55847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 187148 - 187072
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  187148 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 196775 - 196699
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  196775 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 196699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 147809 - 147885
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    ||||||||||||||||||||||||| |||| ||||| |||| ||||||||||| ||| ||||||||| |||||||||    
T  147809 tgtatgcactcagaacctatttctaacatcgaaacagcaatctctacactcaaatcacccaaaaacctagaattcaa 147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 230
Target Start/End: Original strand, 154996 - 155217
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaa---cccaatttcccaa 105  Q
    ||||| ||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||| ||||||| ||||||||| |  |||   || || |||||||    
T  154996 tgtatccactcagaacctatttctaacatcgaaatagcaatctctacactcaaatcacccaaaaacctagaattcaaca--taaactccaaaattcccaa 155093  T
Q  106 ttttcatctagaaaacctgttaaa--ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    || |  | ||   |||||||||||  |  ||||||||||| |  |||||  ||||||||| |||| ||||||||||||||| |||||| || ||||||||    
T  155094 ttctattata---aacctgttaaaatcagaaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaaatcagaaagacaaatgcac 155190  T
Q  204 cggaattggattctcttggctcttctc 230  Q
        || |||||||||||| |||||||    
T  155191 aacgatcggattctcttggttcttctc 155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 147933 - 148030
Alignment:
Q  133 aaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttggctcttctc 230  Q
    ||||||||||| |  |||||  ||||||||| |||| ||||||||||||||| ||||||  | ||||||||    || |||||||||||| |||||||    
T  147933 aaatcagaattaagcatctacactactgaagtaaacctcacccttaccttaaatcagaaaaacaaatgcacaacgatcggattctcttggttcttctc 148030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 785 - 872
Alignment:
Q  117 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| ||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  785 aaaacttgttaaacccaaaatcagaattcaataactatactactgaagcaaacctcacccttaccttaattcagaaggaaaaatgcac 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 13667 - 13866
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc--aaaaaccaagaattcaaaacctaa-cccaattt 100  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||   ||  ||||||||||||||||  ||||| | |||||||||  | ||| |||||  |    
T  13667 aaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaaaaccagaattcaa--cttaaacccaaaat 13764  T
Q  101 cccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatg 200  Q
    ||| | ||||  | | ||| ||||||||| ||||||||||||| || |||||  |||||||||||||| ||||||||||||||||||||| | | |||||    
T  13765 ccctaatttctaccataaa-cctgttaaatcaaaatcagaattaaacatctacactactgaagcaaacctcacccttaccttaattcagacgaacaaatg 13863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 19465 - 19576
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattggattctcttgg 222  Q
    |||||||||||||||||||||||||| |||  ||| |||||||||| | ||||||||||||| ||||| | | ||||||||   |||  |||||||||||    
T  19465 tgttaaaccaaaatcagaatttaataactacactattgaagcaaacctgacccttaccttaaatcagatgaacaaatgcacaacaatcagattctcttgg 19564  T
Q  223 ctcttctccctt 234  Q
    ||||||||||||    
T  19565 ctcttctccctt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 9e-21; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 37884 - 37773
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggat 214  Q
    |||||||||||||  ||| ||||||||| | ||||||  ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||  |||||||    
T  37884 aaaacctgttaaaatcaacatcagaattaagtatctacactattgaagtaaacttcacccttaccttaattcagaaggaaaaaatgcaccgtgattggat 37785  T
Q  215 tctcttggctct 226  Q
    ||||||||||||    
T  37784 tctcttggctct 37773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 117 - 226
Target Start/End: Complemental strand, 135945 - 135834
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaagg-agaaatgcaccggaattggat 214  Q
    |||||||||||||  ||| ||||||||| | ||||||  ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||  |||||||    
T  135945 aaaacctgttaaaatcaacatcagaattaagtatctacactattgaagtaaacttcacccttaccttaattcagaaggaaaaaatgcaccgtgattggat 135846  T
Q  215 tctcttggctct 226  Q
    ||||||||||||    
T  135845 tctcttggctct 135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 105192 - 105283
Alignment:
Q  96 aatttcccaattttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||||| | |||| || |||||||| |||||||| || |||| |||||| ||||||||| |||| |||||||||||||||||||    
T  105192 aatttcccaattttcacc-agaacac-tgttaaactcaaaatcaaaaattaaaatctatactactgaagtaaacctcacccttaccttaattca 105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 37981 - 37929
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  37981 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 37929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 136041 - 135989
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  136041 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 135989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 1372 - 1451
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||||||||||| |||| |||  ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  1372 tgttaaaccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaagga-aaatgcac 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 59658 - 59586
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||||||||||||||||||||||||| || |||||  ||||||||| |||| |||||||||||||||||||||    
T  59658 aaacctgttaaaccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 59586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 61112 - 61006
Alignment:
Q  218 cttggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc-tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||| |||||||||  |  ||||||||||||||||||| || |||||||||| |||||||||| |||  |||||||| ||| |||    
T  61112 cttggctcttctccctttttctcccaaaaact--ctgtttgcacgtaaaagcagttctgactatttcttttcctaact-cccaatacataactccccttt 61016  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  61015 atttcattta 61006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 61221 - 61150
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcaga 190  Q
    |||| |||||||||||||||| |||| || |||||  ||||||||| |||| ||| |||||||||||||||||    
T  61221 aaacttgttaaaccaaaatcataattaaaaatctacactactgaagtaaacctca-ccttaccttaattcaga 61150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 61335 - 61266
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcaccaaaaa 73  Q
    ||||| |||||||| |||||||||||||||| ||||||| ||   ||  |||||||||||||||| ||||    
T  61335 aaatgttgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaa 61266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 371241 - 371317
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    ||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  371241 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcatccaaaaacctagaattcaa 371317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 10334 - 10409
Alignment:
Q  118 aaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||| ||||||| |||| |||| |||| |||||||||||||| |||||||||||||||||||||||    
T  10334 aaacctgttaaacccaaaatcataattcaataactatactactgaagcaaacctcacccttaccttaattcagaag 10409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 10196 - 10256
Alignment:
Q  7 tgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac 67  Q
    |||||||||||  ||||||||||||||  |||||||||| |||| ||||||||||||||||    
T  10196 tgatgtatgcaaccagaacctatttctcacatcaaaacagcaatctctacactcaattcac 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 170 - 1
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaa-gaattcaaaacctaa-cccaattt 100  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||   ||  |||||||||||||||| ||||||||| ||||||||  | ||| |||||  |    
T  170 aaatgatgtatgcactcagaatctatttctaacatcaaaccagtgattactacactcaattcacccaaaaaccaaagaattcaa--cttaaacccaaaat 73  T
Q  101 cccaattttcatctagaaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcac 173  Q
    ||| | ||||  | | ||| ||||||||||||||||||||||| || |||||| |||||||||||||| ||||    
T  72 ccccaatttctaccataaa-cctgttaaaccaaaatcagaattaaaaatctatactactgaagcaaacctcac 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 26990 - 27055
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||||||||    
T  26990 tgttaaaccaaaatcagaattcaataactatattactgaagcaaacttcatccttaccttaattca 27055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 28372 - 28437
Alignment:
Q  123 tgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||||||||||| |||| ||||  ||||||||||||||||| |||||||||||||||    
T  28372 tgttaaaccaaaatcagaattcaataactatattactgaagcaaacttcatccttaccttaattca 28437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 206936 - 206852
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||| ||||||| ||||||||||||| || |||||| |||||||||||||| ||||||||||||||| ||||||| | ||||||||    
T  206936 aaacatgttaaatcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaa-tcagaagaacaaatgcac 206852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 207050 - 206968
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    ||||||||||||||  || |||||||||| | ||| ||||||  |||  |||||||||||||| |||||||||||||||||||    
T  207050 aaatgatgtatgcaaccaaaacctatttcgaacattaaaacagtaattcctacactcaattcacccaaaaaccaagaattcaa 206968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 10676 - 10744
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||||||||||||    
T  10676 aaaacctgttaaactcaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaa 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 7783 - 7859
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaa 85  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||||||||||| ||||||||| |||||||||    
T  7783 tgtatgcactcaaaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaa 7859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 9324 - 9252
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||| ||| ||||||||||||||||||||    
T  9324 aaaacctgttaaactcaaaatcagaaattcatatctatactactgaagtaaaattcacccttaccttaattca 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 14888 - 14816
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||| ||| |||||||||||||| |||||||| |||||||||||||  ||||||||||| |||||||    
T  14888 aaaacctgttcaactcaaaatcagaatttcatatctatactactgaagcaaaactcacccttaccataattca 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 9420 - 9374
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  9420 tgtatgcactcagaacctaattctaacatcagaacaacaatatctac 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 14985 - 14938
Alignment:
Q  9 atgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    |||||||||||||||||||| || || ||||| |||||||||||||||    
T  14985 atgtatgcactcagaacctaattttaacatcagaacaacaatatctac 14938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 254446 - 254514
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||    
T  254446 aaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 247934 - 248002
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| |||||    
T  247934 aaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttatcttaa 248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 322025 - 322092
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||    
T  322025 aaaacctgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 322092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 327713 - 327777
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 180  Q
    ||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  327713 aaaacctattaaactcaaaatcagaatttaatatctatactaatgaagcaaacctcacccttacc 327777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 3524 - 3331
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattca-ccaaaaaccaagaattcaaaacctaaccc-aatttcccaatt 107  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||| ||||||| ||| ||||||||| ||||||||| |   | ||| || |||||||||    
T  3524 tgtatgcactcagaacctatttctaacatcagaacagcaatctctgcactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaatt 3425  T
Q  108 ttcatctagaaaacctgtt-aaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
     | |  |   || |||||| ||| ||||||||||||| || | ||||  |||||||| |||| |||||||||||||||||| ||| || ||||||||    
T  3424 ctaacat---aagcctgttaaaatcaaaatcagaattcaacaactatattactgaagaaaacctcacccttaccttaattctgaaagacaaatgcac 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 47173 - 46980
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaat-ttcccaatt 107  Q
    |||||||||||| |||||||||||| ||| | ||||||||| | ||||||||| ||||| ||||||| | ||||||| |   | |||||  |||||||||    
T  47173 tgtatgcactcataacctatttctaacattagaacaacaatctttacactcaaatcacccaaaaacctaaaattcaacataaaccccaaaattcccaatt 47074  T
Q  108 ttcatctagaaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
     | |  ||   |||||||||||  ||||||||||||| |  | ||||  ||||||||||||| |||||||||||||||||||||| || ||||||||    
T  47073 ctaacata---aacctgttaaaatcaaaatcagaattcagcaactatattactgaagcaaacctcacccttaccttaattcagaaagacaaatgcac 46980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 25576 - 25638
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  25576 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 25638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 36244 - 36306
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  36244 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 36306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 42651 - 42713
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  42651 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 42713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 122003 - 122111
Alignment:
Q  218 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc--tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||    || ||||| ||||  ||||||||||||||  ||| |||| |||||||    
T  122003 cttggctcttctcccttttctcccaaagcttgtctgttt-cacgtaaaactgcttctgactgtttctttttcctaactccccaatacttaactccctttt 122101  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  122102 atttcattta 122111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 325
Target Start/End: Original strand, 132879 - 132987
Alignment:
Q  218 cttggctcttctcccttttctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc--tttcctaactcccctttacataaccccctttt 315  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||    || ||||| ||||  ||||||||||||||  ||| |||| |||||||    
T  132879 cttggctcttctcccttttctcccaaagcttgtctgttt-cacgtaaaactgcttctgactgtttctttttcctaactccccaatacttaactccctttt 132977  T
Q  316 aattcattta 325  Q
    | ||||||||    
T  132978 atttcattta 132987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 17656 - 17579
Alignment:
Q  116 gaaaacctgttaaa-ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||||| ||||||||||| ||||| |||||  ||| ||||| |||| |||||||||||||||||||||||    
T  17656 gaaaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttaattcagaag 17579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 32510 - 32615
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag-aaggagaaatgcaccggaattggattctcttggctcttc 228  Q
    |||||||||||| |||||| |||  ||| ||||| |||| |||||||||||||||||||| || || |||||||| | ||  |||||||||||| |||||    
T  32510 ccaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcagaaatgaaaaatgcacagcaaaaggattctcttggttcttc 32609  T
Q  229 tccctt 234  Q
    ||||||    
T  32610 tccctt 32615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 9409 - 9485
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||| |||||||| ||||||||||||   | |||||| |||||||||||||| |||||||||||||||||||||||    
T  9409 aaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacccttaccttaattcagaag 9485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 1494 - 1570
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||| |||||||| || |||||||||  || |||||| |||||||||||||| |||||||||||||||||||||||    
T  1494 aaaacttgttaaactcagaatcagaatcaaacatctatactactgaagcaaacctcacccttaccttaattcagaag 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 5118 - 5047
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    ||||||||||||  ||||||||||||  ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  5118 aaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaattcacccttaccttaattca 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 6954 - 6867
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    |||||||||||||| |||||| ||| ||||| |||||  ||| ||||| |||| |||||||||||||||||||||| || ||||||||    
T  6954 aaaacctgttaaactcaaaattagactttaaaatctacactattgaagtaaacctcacccttaccttaattcagaatgaaaaatgcac 6867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 16653 - 16566
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||| |||||||| ||||||||||||   | |||||| |||||||||||||| |||| |||||||||||||||||| | ||||||||    
T  16653 aaaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacacttaccttaattcagaagaaaaaatgcac 16566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 982 - 1049
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||| |||| |||||  |||||||||||||| ||||||||||||||    
T  982 aaaacctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttacctta 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 893 - 933
Alignment:
Q  16 cactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||| ||||| ||||||||| |||||    
T  893 cactcagaacctatttctaacatcagaacaacaatctctac 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 46048 - 45915
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcacc-aaaaaccaagaattcaaaacctaacccaatttcccaattt 108  Q
    ||||||||  ||||||||||||||| |||||||||||   | ||||| |||||| |||| ||||| |||  |  ||||||||||||||| ||||||||||    
T  46048 tgtatgcaaccagaacctatttctaacatcaaaacaaggtt-tctaccctcaatccacccaaaaatcaaagaaccaaaacctaacccaaattcccaattt 45950  T
Q  109 tcatctagaaaacctgttaaaccaaaatcagaattt 144  Q
    ||||  |||| |  ||||||||||||||||||||||    
T  45949 tcatacagaaca-atgttaaaccaaaatcagaattt 45915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 171028 - 170961
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| |||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  171028 aaaacctgttaaactcaaaattagaattcaataactatactactgaagcaaacctcacccttacctta 170961  T

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Target: scaffold0560 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 241 - 136
Alignment:
Q  130 ccaaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcag-aaggagaaatgcaccggaattggattctcttggctcttc 228  Q
    |||||||||||| |||||| |||  ||| | ||| |||| |||||||||||||||||||| || || |||||||| | ||  |||||||||||| |||||    
T  241 ccaaaatcagaaattaataactacactattaaagtaaacctcacccttaccttaattcagaaatgaaaaatgcacagcaaaaggattctcttggttcttc 142  T
Q  229 tccctt 234  Q
    ||||||    
T  141 tccctt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 16073 - 16020
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||||||||||    
T  16073 caaaatcagaattcaatatctacactactgaagcaaacctcacccttaccttaa 16020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 3297 - 3346
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacc 180  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  3297 caaaatcagaattcaatatctatactactgaagcaaacctcacccttacc 3346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 45309 - 45370
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||||||||||   |||||||| ||||| |||||||| |||||||||||||||||||||||    
T  45309 caaaatcagaatcagatatctatactactaaagcaaacatcacccttaccttaattcagaag 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 4188 - 4248
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    |||||||||||| |||| |||  ||| |||||||||| |||||||||||||||||||||||    
T  4188 aaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcagaag 4248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 12728 - 12688
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  12728 tgtatgcactcagaacccatttctaacatcaaaacaacaat 12688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 26743 - 26795
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  26743 tgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaa 26795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 45176 - 45228
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| ||||||||  |||||||||||||| ||||||||||||||    
T  45176 caaaatcagaattcaatatctacactactgaagcaaacctcacccttacctta 45228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 45283 - 45312
Alignment:
Q  227 tctcccttttctcccaaaacttgtctgttt 256  Q
    ||||||||||||||||||||||||||||||    
T  45283 tctcccttttctcccaaaacttgtctgttt 45312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 8208 - 8275
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||| ||||||||||||| |  |||||| ||| |||||||||| ||||||||||||||    
T  8208 aaaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 8112 - 8164
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaa 62  Q
    ||||||||||||||||| |||| || ||||||||||||||| ||||| |||||    
T  8112 tgtatgcactcagaacccatttataacatcaaaacaacaatctctactctcaa 8164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 138006 - 138069
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||||||| ||||||||||| |||| |||||  |||||||||||||| |||||||||||||||    
T  138006 ctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttaccttaa 138069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 160724 - 160663
Alignment:
Q  122 ctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||| ||||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  160724 ctgttaaacacaaaatcagaatt-aataactatactattgaagcaaacttcacccttacctta 160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 23157 - 23076
Alignment:
Q  221 ggctcttctccctttt-ctcccaaaacttgtctgtttgcacgtaaaagcaattttgactatttc--tttcctaactccccttta 301  Q
    |||||||||||||||| |||||||||  |  ||||||||||||||||||| ||  |||||||||  ||||||||||||||||||    
T  23157 ggctcttctccctttttctcccaaaagct--ctgtttgcacgtaaaagcagttcagactatttctttttcctaactccccttta 23076  T

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Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 23967 - 24039
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactg-aagcaaacttcacccttaccttaattcaga 190  Q
    |||| |||||||||||||||||||||| | |||||| ||| || ||| |||| |||||||||||||||||||||    
T  23967 aaacatgttaaaccaaaatcagaatttta-atctatactattgaaagtaaacctcacccttaccttaattcaga 24039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 14441 - 14388
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||| |||||| |||| |||||| ||||||||| ||||||||||||||||||||    
T  14441 caaattcagaaattaaaatctatactactgaagtaaacttcacccttaccttaa 14388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 1185 - 1225
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  1185 tgtatgcactcagaacccatttctaacatcaaaacaacaat 1225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 1297 - 1353
Alignment:
Q  132 aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattca 188  Q
    |||||||||||  ||||||||| ||||||||| |||  |||||||||||||||||||    
T  1297 aaaatcagaatccaatatctatactactgaagtaaaactcacccttaccttaattca 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 14332 - 14400
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    |||||||||||||| |||||||||||||||| |||||  ||| ||||| ||||  ||||||||||||||    
T  14332 aaaacctgttaaactcaaaatcagaatttaacatctacactattgaagtaaaccccacccttaccttaa 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 11525 - 11473
Alignment:
Q  131 caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||| ||||| ||| ||| |||||||||| ||||||||||||||    
T  11525 caaaatcagaattcaatatttatactattgaagcaaacctcacccttacctta 11473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 26549 - 26624
Alignment:
Q  117 aaaacctgttaaacc-aaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||| ||||||||| |||||||||||| |||| |||  ||| ||||||||||  ||||||||||||||||||||||    
T  26549 aaaacttgttaaacctaaaatcagaattcaataactacactattgaagcaaacc-cacccttaccttaattcagaag 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 8087 - 8155
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaa 184  Q
    ||||| |||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||    
T  8087 aaaacatgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 8155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 55262 - 55190
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaacaatatctacactcaattcac-caaaaacc 75  Q
    ||||| ||||||||  ||||||||||||||| || |||||||  ||| |||||||||||||||| ||||||||    
T  55262 aaatgttgtatgcaaccagaacctatttctaacagcaaaacagtaatctctacactcaattcactcaaaaacc 55190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 978 - 844
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaa-gcaaacttcacccttaccttaattcagaaggagaaatgcaccggaattg-gat 214  Q
    ||||| |||||||||||||||||||||  | |||||| ||| |||| | |||| ||||||||||||||||||| | | | |||  |  | |||||  | |    
T  978 aaaacatgttaaaccaaaatcagaattata-atctatactattgaaagtaaacatcacccttaccttaattcaaacgaacaaactctacagaattctggt 880  T
Q  215 tctcttggctcttctccctt-ttctcccaaaacttg 249  Q
    |||||||||||||||||||| |||||||||||||||    
T  879 tctcttggctcttctcccttgttctcccaaaacttg 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 10097 - 10132
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaaca 45  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10097 tgtatgcactcagaacctatttctaacatcaaaaca 10132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 245
Target Start/End: Complemental strand, 15941 - 15911
Alignment:
Q  215 tctcttggctcttctcccttttctcccaaaa 245  Q
    |||||||||||||||||||||||||||||||    
T  15941 tctcttggctcttctcccttttctcccaaaa 15911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 10107 - 10142
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaaca 45  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10107 tgtatgcactcagaacctatttctaacatcaaaaca 10142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 26842 - 26767
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaag 192  Q
    ||||||||||||  |||||| |||||| | || |||  ||| |||||||||| |||||||||||||||||||||||    
T  26842 aaacctgttaaaatcaaaattagaattcattaactacactattgaagcaaacctcacccttaccttaattcagaag 26767  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 21131 - 21198
Alignment:
Q  117 aaaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    |||||||||||||  |||||||| || | |||| |||| |||||||||||||| ||||||||||||||    
T  21131 aaaacctgttaaattcaaaatcaaaactcaataactatactactgaagcaaacctcacccttacctta 21198  T

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Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 21035 - 21075
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaat 50  Q
    ||||||||||||||||| ||||||| |||||| ||||||||    
T  21035 tgtatgcactcagaacccatttctaacatcaatacaacaat 21075  T

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Target: scaffold0377 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 4055 - 4101
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  4055 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 4101  T

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Target: scaffold0377; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 8094 - 8140
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatctac 56  Q
    ||||||||||||||||||||||||| ||||| || |||||| |||||    
T  8094 tgtatgcactcagaacctatttctaacatcagaataacaatctctac 8140  T

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Target: scaffold0097 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 28701 - 28743
Alignment:
Q  4 aaatgatgtatgcactcagaacctatttctaccatcaaaacaa 46  Q
    ||||||||||||||  ||||||||||||||| |||||||||||    
T  28701 aaatgatgtatgcaaccagaacctatttctaacatcaaaacaa 28743  T

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Target: scaffold0089 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 17760 - 17694
Alignment:
Q  117 aaaacctgttaaaccaaaatcagaatttaatatctattctactgaagcaaacttcacccttacctta 183  Q
    ||||||||||||||  |||||||| ||||| |||||  ||| ||||| |||| ||||||||||||||    
T  17760 aaaacctgttaaactcaaatcagactttaaaatctacactattgaagtaaacctcacccttacctta 17694  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 50928 - 51014
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaattcagaaggagaaatgcac 203  Q
    ||||||||||||| |||||||||| |||||  ||||  ||| ||||| ||||  ||||||||||||| ||||||| || ||||||||    
T  50928 aaacctgttaaactcaaaatcagactttaaattctacactattgaagtaaaccccacccttaccttagttcagaatgaaaaatgcac 51014  T

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Target: scaffold0405 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 2524 - 2455
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||| |||||||||||||||||    
T  2524 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacctcacccttaccttaatt 2455  T

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Target: scaffold0405; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 11232 - 11163
Alignment:
Q  118 aaacctgttaaac-caaaatcagaatttaatatctattctactgaagcaaacttcacccttaccttaatt 186  Q
    ||||||||||||  ||||||||||||| | || |||  ||| |||||||||| |||||||||||||||||    
T  11232 aaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacctcacccttaccttaatt 11163  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 31651 - 31696
Alignment:
Q  10 tgtatgcactcagaacctatttctaccatcaaaacaacaatatcta 55  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||    
T  31651 tgtatacactcagaacctatttctaacatcagaacaacaatctcta 31696  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 36534 - 36606
Alignment:
Q  118 aaacctgttaaaccaaaatcagaatttaatatctattctactga-agcaaacttcacccttaccttaattcaga 190  Q
    |||| ||||||||||||||||||| |||  |||||| ||| ||| || |||| |||||||||||||||||||||    
T  36534 aaacatgttaaaccaaaatcagaa-ttataatctatactaatgagagtaaacctcacccttaccttaattcaga 36606  T

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