View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13860_low_26 (Length: 328)
Name: NF13860_low_26
Description: NF13860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13860_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 311
Target Start/End: Complemental strand, 6417660 - 6417369
Alignment:
| Q |
20 |
agttgattgaatgtggtatgcataattggggtaagataaaacaaatgtctgtggagagtaacggtctaagaatttatttgggaaaatgaaaaacgtgtaa |
119 |
Q |
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| T |
6417660 |
agttgattgaatgtggtatgcataattggggtaagataaaacaaatgtctgtggagagtaacggtctaagaatttatttgggaaaatgaaaaacgtgtaa |
6417561 |
T |
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| Q |
120 |
ttatttttggagacatatactggcctacgttttaaataaacactatccaaaagtcctaatattgtgaagggccnnnnnnngagccagtacttgctctgtg |
219 |
Q |
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| T |
6417560 |
ttatttttggagacatatactggcctacgttttaaataaacactatccaaaagtcctaatattgtgaagggcctttttttgagccagtacttgctctgtg |
6417461 |
T |
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| Q |
220 |
atataagttaaaatagggcaagtcacgcttgttgaatagtatattcattaattagtatatcgagactttctttgggttgcaccaattgagtg |
311 |
Q |
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| T |
6417460 |
atataagttaaaatagggcaagtcacgcttgttgaatagtatattcattaattagtatatcgagactttctttgggttgcaccaattgagtg |
6417369 |
T |
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