View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13860_low_31 (Length: 278)
Name: NF13860_low_31
Description: NF13860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13860_low_31 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 489773 - 490034
Alignment:
| Q |
1 |
atgtgcttctgagttttcacattcggtatcaactaagatcaacatcaaagacattgaatggaacagtggaaagaatccaattcccattgaaggagttcaa |
100 |
Q |
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| T |
489773 |
atgtgcttctgagttttcacattcggtatcaactaagatcaacatcaaagacattgaatggaacagtggaaagaatccaattcccattgaaggagttcaa |
489872 |
T |
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| Q |
101 |
gtttttgctttgtatttcagccaagccaagaagctcaaacttttctctccgtctgaaattgaagaaatctctttggagccattcaactttgagcttataa |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
489873 |
gtttttgctttgtatttcagccaagccaagaagctgaaacttttctctccatctgaaattgaagaaatctctttggagccattcaactttgagcttataa |
489972 |
T |
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| Q |
201 |
ctgtttctccagtcactttatttcctaaaaagtccttgaagtttgctcctattggtttggtt |
262 |
Q |
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| T |
489973 |
ctgtttctccagtcactttatttcctaaaaagtccttgaagtttgctcctattggtttggtt |
490034 |
T |
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