View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13860_low_35 (Length: 224)
Name: NF13860_low_35
Description: NF13860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13860_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 53617069 - 53617280
Alignment:
| Q |
1 |
ccggcgttattcccggtcctgataggtttgcggttcaggattcgtattttccggttcggcgaggaggatcggtgacgctgtatcaagatgcacacgttcc |
100 |
Q |
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| T |
53617069 |
ccggtgttattcccggtcctgataggtttgcggttcaggattcgtattttccggttcggcgaggaggatcggtgacgctgtatcaagatgcacacgttcc |
53617168 |
T |
|
| Q |
101 |
ggattcgatgttaccggagattgaattggatgatggtgttgagtttcagcaggggaaatgttgggaagatatttgtcacgcaatattagaagcgcatcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53617169 |
agattcgatgttaccggagattgaattggatgatggtgttgagtttcagcaggggaaatgttgggaagatatttgtcacgcaatattagaagcgcatcat |
53617268 |
T |
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| Q |
201 |
ttggtgtatatt |
212 |
Q |
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|||||||||||| |
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| T |
53617269 |
ttggtgtatatt |
53617280 |
T |
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