View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13860_low_6 (Length: 558)
Name: NF13860_low_6
Description: NF13860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13860_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 515; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 9 - 543
Target Start/End: Complemental strand, 10626012 - 10625478
Alignment:
| Q |
9 |
gacatcatcaaagaatcgactcggagaggttgcggtgttaatattttgcgaactcgaaaactcaataaaaaatgataatggaaaaactccagttgcgggg |
108 |
Q |
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| T |
10626012 |
gacatcagccaagaatcgactcggagaggttgcggtgttaatattttgcgaactcgaaaactcaataaaaaatgataatggaaaaaccccagttgcgggg |
10625913 |
T |
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| Q |
109 |
ggcgcaattcatccgctaactcgctacataattaactatctacgactctcatgtgagtataaagacacattggaagaagtgtttcgcgaacattcaaaaa |
208 |
Q |
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| T |
10625912 |
ggcgcaattcatccgctaactcgctacataattaactatctacgactctcatgtgagtataaagacacattggaagaagtgtttcgcgaacattcaaaaa |
10625813 |
T |
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| Q |
209 |
ttgaacgttcagattcaacaagtaggccacgttatgaaaacgaaaatcaacattcaaacgagaaggaaaatgagtcacctttcacaggacaattgacacg |
308 |
Q |
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| T |
10625812 |
ttgaacgttcagattcaacaagtaggccacgttatgaaaacgaaaatcaacattcaaacgagaaggaaaatgagtcacctttcacaggacaattgacacg |
10625713 |
T |
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| Q |
309 |
tgtaatggaattactggacacaaatcttgaaggaaaagctaagttgtacaaagaagtaccattaagttgcatctttatgatgaacaatggaaggtacatt |
408 |
Q |
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| T |
10625712 |
tgtaatggaattactggacacaaatcttgaaggaaaagctaagttgtacaaagaagtaccattaagttgcatctttatgatgaacaatggaaggtacatt |
10625613 |
T |
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| Q |
409 |
gttcaaaaaataaaatcttcaactgaattttatcaagtgatgggtgaaacttggtatcgtaagagatcaacagagctgagaacttaccacaaaaactatc |
508 |
Q |
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| T |
10625612 |
gttcaaaaaataaaatcttcaactgaattttatcaagtgatgggtgaaacatggtatcgtaagagatcaacagagctgagaacttaccacaaaaactatc |
10625513 |
T |
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| Q |
509 |
aaatagaaacatggggaaagatattgaattgttta |
543 |
Q |
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| T |
10625512 |
aaatagaaacatggggaaagatattaaattgttta |
10625478 |
T |
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