View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13861_low_12 (Length: 253)

Name: NF13861_low_12
Description: NF13861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13861_low_12
NF13861_low_12
[»] chr6 (14 HSPs)
chr6 (21-208)||(26460511-26460699)
chr6 (28-208)||(19272237-19272417)
chr6 (32-202)||(16597177-16597348)
chr6 (28-202)||(18258029-18258211)
chr6 (28-202)||(11794131-11794313)
chr6 (121-204)||(19084721-19084805)
chr6 (23-115)||(1557698-1557791)
chr6 (28-111)||(30755548-30755632)
chr6 (28-146)||(19405770-19405889)
chr6 (28-111)||(19038452-19038536)
chr6 (28-111)||(23496578-23496662)
chr6 (28-111)||(19025409-19025493)
chr6 (28-111)||(23431940-23432024)
chr6 (28-111)||(23490980-23491064)
[»] scaffold0168 (1 HSPs)
scaffold0168 (28-202)||(1335-1510)
[»] chr5 (13 HSPs)
chr5 (21-199)||(16832132-16832311)
chr5 (28-199)||(18156174-18156346)
chr5 (28-201)||(20024383-20024556)
chr5 (28-202)||(10624336-10624518)
chr5 (28-177)||(40932909-40933059)
chr5 (28-163)||(19859549-19859683)
chr5 (28-183)||(19212406-19212561)
chr5 (78-197)||(26836190-26836309)
chr5 (30-180)||(17432608-17432760)
chr5 (28-111)||(21530334-21530418)
chr5 (172-202)||(40936793-40936823)
chr5 (28-111)||(20506338-20506422)
chr5 (28-111)||(26274116-26274200)
[»] chr7 (14 HSPs)
chr7 (23-211)||(40342774-40342963)
chr7 (28-199)||(10827729-10827901)
chr7 (28-199)||(11021521-11021693)
chr7 (28-211)||(18752681-18752862)
chr7 (76-199)||(10864190-10864314)
chr7 (28-188)||(10478135-10478295)
chr7 (28-101)||(24876398-24876471)
chr7 (28-183)||(16713223-16713377)
chr7 (28-183)||(17687459-17687613)
chr7 (28-156)||(41239201-41239328)
chr7 (23-115)||(15758584-15758677)
chr7 (28-156)||(18450811-18450938)
chr7 (28-112)||(11989417-11989502)
chr7 (28-115)||(1978237-1978325)
[»] chr2 (28 HSPs)
chr2 (28-198)||(22593771-22593942)
chr2 (28-202)||(34827556-34827731)
chr2 (23-202)||(21256406-21256579)
chr2 (28-197)||(10480336-10480506)
chr2 (39-187)||(23769329-23769478)
chr2 (28-202)||(23814916-23815099)
chr2 (28-202)||(37130432-37130614)
chr2 (28-202)||(28567644-28567825)
chr2 (28-189)||(21904916-21905078)
chr2 (62-202)||(23829764-23829912)
chr2 (28-162)||(25349247-25349381)
chr2 (28-202)||(23803285-23803469)
chr2 (28-211)||(16664603-16664786)
chr2 (23-115)||(23870539-23870631)
chr2 (28-202)||(31817945-31818120)
chr2 (29-135)||(20524168-20524274)
chr2 (29-202)||(22880975-22881149)
chr2 (23-115)||(22708194-22708286)
chr2 (28-183)||(30089867-30090023)
chr2 (28-183)||(30126472-30126628)
chr2 (28-183)||(30051852-30052008)
chr2 (28-183)||(30142896-30143052)
chr2 (29-156)||(20442245-20442371)
chr2 (78-188)||(25966132-25966243)
chr2 (28-183)||(20281099-20281254)
chr2 (29-130)||(23995665-23995765)
chr2 (28-111)||(22633854-22633938)
chr2 (28-111)||(22648603-22648687)
[»] scaffold0077 (1 HSPs)
scaffold0077 (23-202)||(12346-12526)
[»] chr3 (14 HSPs)
chr3 (28-211)||(132373-132556)
chr3 (28-202)||(43135505-43135687)
chr3 (28-202)||(12844499-12844674)
chr3 (28-163)||(13101856-13101990)
chr3 (28-146)||(13023904-13024022)
chr3 (93-201)||(22445017-22445126)
chr3 (28-189)||(55002306-55002468)
chr3 (78-184)||(1934596-1934702)
chr3 (28-146)||(12491947-12492066)
chr3 (23-183)||(12021422-12021584)
chr3 (122-152)||(14345555-14345585)
chr3 (29-182)||(14133335-14133486)
chr3 (28-111)||(10139791-10139875)
chr3 (28-111)||(10171158-10171242)
[»] chr1 (18 HSPs)
chr1 (21-191)||(27131729-27131900)
chr1 (28-201)||(21168275-21168448)
chr1 (28-202)||(4361567-4361746)
chr1 (32-202)||(2603413-2603584)
chr1 (28-182)||(27902049-27902204)
chr1 (23-211)||(21381966-21382154)
chr1 (29-197)||(16406710-16406879)
chr1 (27-202)||(21076589-21076765)
chr1 (28-202)||(23511640-23511815)
chr1 (32-202)||(50826413-50826583)
chr1 (28-202)||(4229781-4229963)
chr1 (30-154)||(21550555-21550678)
chr1 (30-197)||(21137687-21137855)
chr1 (121-188)||(18530668-18530736)
chr1 (28-146)||(22684625-22684744)
chr1 (28-146)||(31845645-31845764)
chr1 (28-115)||(21310759-21310847)
chr1 (28-115)||(29305248-29305336)
[»] scaffold0297 (1 HSPs)
scaffold0297 (28-197)||(8716-8886)
[»] chr8 (16 HSPs)
chr8 (28-201)||(18735401-18735574)
chr8 (28-197)||(15911743-15911913)
chr8 (28-202)||(22698023-22698205)
chr8 (30-196)||(15337344-15337518)
chr8 (30-196)||(15426409-15426583)
chr8 (30-196)||(15517713-15517887)
chr8 (21-197)||(27818211-27818390)
chr8 (28-188)||(22698675-22698835)
chr8 (28-211)||(41438768-41438951)
chr8 (28-197)||(29708103-29708273)
chr8 (27-136)||(25388980-25389090)
chr8 (53-184)||(17637818-17637949)
chr8 (121-184)||(17839984-17840048)
chr8 (23-63)||(16668026-16668066)
chr8 (28-111)||(17426119-17426203)
chr8 (28-111)||(22352036-22352120)
[»] scaffold0100 (1 HSPs)
scaffold0100 (29-201)||(9012-9184)
[»] scaffold0012 (1 HSPs)
scaffold0012 (23-206)||(250008-250192)
[»] scaffold0063 (1 HSPs)
scaffold0063 (30-211)||(70667-70848)
[»] scaffold0417 (1 HSPs)
scaffold0417 (21-184)||(1319-1482)
[»] chr4 (10 HSPs)
chr4 (23-202)||(10267247-10267433)
chr4 (32-184)||(49526412-49526566)
chr4 (29-202)||(1658617-1658797)
chr4 (23-194)||(31079699-31079872)
chr4 (28-208)||(50687566-50687747)
chr4 (28-202)||(18566930-18567111)
chr4 (28-202)||(3077875-3078049)
chr4 (28-202)||(14022358-14022533)
chr4 (84-183)||(27812265-27812364)
chr4 (28-73)||(27812389-27812434)
[»] scaffold0151 (1 HSPs)
scaffold0151 (28-202)||(14068-14249)
[»] scaffold0190 (1 HSPs)
scaffold0190 (29-202)||(7450-7631)
[»] scaffold0480 (1 HSPs)
scaffold0480 (28-202)||(3722-3897)
[»] scaffold0014 (1 HSPs)
scaffold0014 (47-211)||(7473-7635)
[»] scaffold0016 (1 HSPs)
scaffold0016 (28-211)||(200148-200330)
[»] scaffold0770 (2 HSPs)
scaffold0770 (28-152)||(3682-3805)
scaffold0770 (174-211)||(3647-3683)
[»] scaffold0029 (2 HSPs)
scaffold0029 (28-152)||(101986-102109)
scaffold0029 (174-211)||(101951-101987)
[»] scaffold0096 (1 HSPs)
scaffold0096 (32-202)||(36355-36534)
[»] scaffold0013 (5 HSPs)
scaffold0013 (28-197)||(129188-129358)
scaffold0013 (28-197)||(107444-107614)
scaffold0013 (125-197)||(129898-129971)
scaffold0013 (125-197)||(136016-136089)
scaffold0013 (125-197)||(144729-144802)
[»] scaffold0171 (1 HSPs)
scaffold0171 (33-188)||(26873-27027)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-202)||(33268-33443)
[»] scaffold0059 (2 HSPs)
scaffold0059 (29-197)||(68043-68212)
scaffold0059 (29-197)||(76148-76317)
[»] scaffold0023 (4 HSPs)
scaffold0023 (85-202)||(116490-116608)
scaffold0023 (30-115)||(6674-6760)
scaffold0023 (28-111)||(62171-62255)
scaffold0023 (28-111)||(71349-71433)
[»] scaffold0239 (2 HSPs)
scaffold0239 (28-211)||(16915-17099)
scaffold0239 (28-73)||(5572-5617)
[»] scaffold0053 (1 HSPs)
scaffold0053 (28-211)||(45155-45339)
[»] scaffold0058 (1 HSPs)
scaffold0058 (28-189)||(14971-15132)
[»] scaffold0035 (1 HSPs)
scaffold0035 (28-152)||(25734-25857)
[»] scaffold0060 (1 HSPs)
scaffold0060 (28-146)||(32102-32221)
[»] scaffold0001 (1 HSPs)
scaffold0001 (28-146)||(390108-390227)
[»] scaffold0093 (1 HSPs)
scaffold0093 (78-155)||(43649-43726)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-115)||(151418-151511)
[»] scaffold1496 (1 HSPs)
scaffold1496 (28-147)||(1427-1545)
[»] scaffold0509 (2 HSPs)
scaffold0509 (28-146)||(1206-1325)
scaffold0509 (28-146)||(7634-7753)
[»] scaffold0362 (1 HSPs)
scaffold0362 (28-146)||(11325-11444)
[»] scaffold0046 (1 HSPs)
scaffold0046 (28-146)||(30616-30735)
[»] scaffold0126 (1 HSPs)
scaffold0126 (38-155)||(31202-31318)
[»] scaffold0358 (1 HSPs)
scaffold0358 (28-111)||(15741-15825)
[»] scaffold0130 (1 HSPs)
scaffold0130 (28-111)||(39885-39969)
[»] scaffold0081 (1 HSPs)
scaffold0081 (28-111)||(44282-44366)
[»] scaffold0216 (1 HSPs)
scaffold0216 (28-146)||(19957-20076)
[»] scaffold0504 (1 HSPs)
scaffold0504 (28-73)||(683-728)
[»] scaffold0282 (1 HSPs)
scaffold0282 (28-111)||(8780-8864)
[»] scaffold0270 (2 HSPs)
scaffold0270 (28-111)||(8100-8184)
scaffold0270 (28-111)||(15230-15314)
[»] scaffold0108 (1 HSPs)
scaffold0108 (28-111)||(23053-23137)
[»] scaffold0101 (1 HSPs)
scaffold0101 (28-111)||(50927-51011)
[»] scaffold0026 (1 HSPs)
scaffold0026 (28-111)||(142238-142322)
[»] scaffold0022 (1 HSPs)
scaffold0022 (28-111)||(58527-58611)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 26460699 - 26460511
Alignment:
Q  21 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||||| |||     
T  26460699 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagataaacgagtcacaagttgcaatgtatgaacatgtgtac 26460600  T
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttt 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26460599 caatttacattcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttgagcaattcattttacttt 26460511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 208
Target Start/End: Complemental strand, 19272417 - 19272237
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  19272417 ggtcacaatccaatcatacacaaaacttacactcaaattatctgcatggaagagagaaacgagtcacaagttgc-atgtatgaacatgtgtaccaattta 19272319  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttt 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  19272318 cattcaatcaatgcaatttaagtttattttcttaaacgtctttacaatttacttgtttcttttgagcaatctattttacttt 19272237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 16597348 - 16597177
Alignment:
Q  32 acaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacatt 131  Q
    |||||||||||||| | |||||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||||||||||||| ||| |||||||||||    
T  16597348 acaatccaatcatataaaaaacttacactcaaattatccgcatggaagaaagaaacgagtgacaagttgcaatgtatgaacatgtgtaccaatttacatt 16597249  T
Q  132 caatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| |||||    
T  16597248 caatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttaagtaatacattt 16597177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 18258211 - 18258029
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| || | ||||| |||| ||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  18258211 ggtcacaattcattaatacaaaaaagttacactcaaattatccgcatgaaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtatcaattta 18258112  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctt-------tacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||| ||||||||||| ||||||||||| || ||       ||||||||| ||||||||||||| ||||||||||    
T  18258111 cattcaatcaatacaatttaagttcattttcttaaatgtttttgcaatctacaatttatttgtttcttttgaacaattcattt 18258029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 11794131 - 11794313
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||| ||||| |||| ||||||||||||||||||||  ||||| | |||||| ||||||||||| ||||||||||||| ||| ||| |||    
T  11794131 ggtcacaattcaattatacaaaaaatttacactcaaattatccgcatggaagatataaacgaatcacaagttgcaatgtatgaacatgtgtaccaactta 11794230  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||| ||||||||||| ||||||||||| |||       ||||||||| |||||| |||||||||||||||||||    
T  11794231 cattcaatcaatacaatttaagttcattttcttaaatgtctctgcaatttacaattgacttgtctcttttgagcaattcattt 11794313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 19084721 - 19084805
Alignment:
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgtttcttttgagcaattcatttta 204  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| |||  |||||||| |||||    
T  19084721 caatttacattcaatcaatgcaatttaagtttattttcttaattgtctttgcaatttacttgtttatttcaagcaattcctttta 19084805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 1557791 - 1557698
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||| |||| |  |||| || |||||||||||||||||| | |||||||||||    
T  1557791 aaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatg 1557698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 30755632 - 30755548
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| ||||||||| |||||||||||||||| ||| |||| |  |||| || |||||||||||||||||| | |||||||    
T  30755632 ggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 30755548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 19405889 - 19405770
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | ||||||||||| | | ||| ||    
T  19405889 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaactt 19405790  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| | ||||||||||||    
T  19405789 tcattaagtcaatgcaattt 19405770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 19038536 - 19038452
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| ||| |||| |  |||| || |||||||||||||||||| | |||||||    
T  19038536 ggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 19038452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 23496578 - 23496662
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | |||||| |  |||| || |||||||||||||||||| | |||||||    
T  23496578 ggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 23496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 19025493 - 19025409
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  19025493 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 19025409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 23431940 - 23432024
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| ||| | || |  |||| || |||||||||||||||||| | |||||||    
T  23431940 ggtcacaattcaatcatactaaaaacttacactcaatattgttcgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 23432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 23490980 - 23491064
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  23490980 ggtcacaattcaatcatactaaaaacttacactcaatactttccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 23491064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 1510 - 1335
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  1510 ggtcacaagtcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 1411  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1410 cattcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttgagcaattcattt 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 16832132 - 16832311
Alignment:
Q  21 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaa 120  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||     
T  16832132 ggaacgtgatcacaatccaatcatacacaaaacttacactcaaattatccgcattgaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtac 16832231  T
Q  121 caatttacattcaatcaatgcaatttaagtttattttc-ttaaagtctttacaatttacttgtttcttttgagcaattca 199  Q
    |||||||||||||||||||||||||||| || |||||| || | ||||||||||||||||||||||||||||||||||||    
T  16832232 caatttacattcaatcaatgcaatttaaattcattttcttttatgtctttacaatttacttgtttcttttgagcaattca 16832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 18156174 - 18156346
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||  || ||| |||||||    
T  18156174 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattta 18156273  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattca 199  Q
     ||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  18156274 tattcaatcaatgcaatttaagttcattttcctaaatgtctttacaatttacttgtttcgtttgagcaattca 18156346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 20024556 - 20024383
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||    
T  20024556 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtaccaatcta 20024458  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcatt 201  Q
    ||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||||| |||||    
T  20024457 cattcaatcaatgcattttaagttcattttcttaaatgtctttgcaatttacttgtttcttttaagcaactcatt 20024383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 10624336 - 10624518
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||  ||||||| ||| |||||||||||||| ||||||||||||| ||| |||||||    
T  10624336 ggtcacaattctatcataca-aaaacttacactcaaattatccgcatggaagagataaatgagtcacaagttgcaatgtatgaacatgtgtaccaattta 10624434  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa--gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||| ||| || |||||||| |||||||||||  |||       ||||||||||||||||||||||||||||||||||||    
T  10624435 cattcaataaatacactttaagttcattttcttaaaatgtctttgcaatttacaatttacttgtttcttttgagcaattcattt 10624518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 40932909 - 40933059
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| |||||| |||||||||||||| |||  ||||||| |||||||||||||||||| ||||||||| ||| ||| |||||||    
T  40932909 ggtcacaattctatcatacaaaaaactaacactcaaattatctgcatggaagagataaacgagtcacaagttgcaatgtatgaatatgtgtaccaattta 40933008  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaattta 177  Q
    |||||||||||| ||||||||||| |||| |||||| |||||| |||||||    
T  40933009 cattcaatcaatacaatttaagttcatttccttaaatgtctttgcaattta 40933059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 19859683 - 19859549
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||  ||||| |||||||||||||||| ||||  ||   || |||||||||||| ||||||  | |||||||||  || ||| |||||||    
T  19859683 ggtcacaattcaacaatacagaaaacttacactcaaactatcaacatctaa-agagaaacgagttacaagtcccaatgtatgaatttgtgtaccaattta 19859585  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa 163  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19859584 cattcaatcaatgcaatttaagtttgttttcttaaa 19859549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 19212406 - 19212561
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||| | |||||||||||||||| ||||||||   | |||| |||||||| |||  |    ||||| |||  || ||| |||||||    
T  19212406 ggtcacaattcaatcatataaaaaacttacactcaaactatccgcattta-gagataaacgagttacacatcaaaatgtacgaatctgtgtaccaattta 19212504  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||||||||||||||||||||||| |||  ||||| | |||| |||||||||||||    
T  19212505 cattcaatcaatgcaatttaagtttgtttctttaaattcctttgcaatttacttgtt 19212561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 26836309 - 26836190
Alignment:
Q  78 agagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaagtctttacaattta 177  Q
    |||||||||| ||| ||||||  | |||||||||  || ||| |||||||||||||||  ||||||||||||||||||   ||||| || |  |||||||    
T  26836309 agagagaaactagtaacaagtctcgatgtatgaatctgtgtatcaatttacattcaatttatgcaatttaagtttattcctttaaattcctagcaattta 26836210  T
Q  178 cttgtttcttttgagcaatt 197  Q
    |||||| ||||  |||||||    
T  26836209 cttgttcctttcaagcaatt 26836190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 180
Target Start/End: Complemental strand, 17432760 - 17432608
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacac--tcaaattatccgcaaagaagagagaaacgagtcacaagttgcta-tgtatgaacatgcgtaacaattt 126  Q
    ||||||| |||||| |||||||||||||||  ||||| |||| |||   ||| ||||||||||| ||||||  | | ||||||||  || ||| ||||||    
T  17432760 tcacaattcaatcacacacaaaacttacacactcaaactatctgcattcaag-gagaaacgagtaacaagtaacaaatgtatgaatctgtgtaccaattt 17432662  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagtctttacaatttactt 180  Q
    |||||||||  ||||||||||||||||| |  ||||| || || ||||||||||    
T  17432661 acattcaatttatgcaatttaagtttatctctttaaattccttgcaatttactt 17432608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 21530334 - 21530418
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | |||||| |  |||| || |||||||||||||||||| | |||||||    
T  21530334 ggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 21530418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 40936793 - 40936823
Alignment:
Q  172 aatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||||||||||||||    
T  40936793 aatttacttgtttcttttgagcaattcattt 40936823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 20506422 - 20506338
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| ||||||||| |||||||||||||||| | | |||| |  |||| || |||||||| ||||||||| | |||||||    
T  20506422 ggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacgagttacaagttgcaaagtatgaa 20506338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 26274200 - 26274116
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  26274200 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagtgacaaacgagtcacaagttgcaaagtatgaa 26274116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 40342963 - 40342774
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||    
T  40342963 aaagtggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtacca 40342864  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| || || | |||||||||||    
T  40342863 atttacatttaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgtttcttttgaacattttactttacttttat 40342774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 10827901 - 10827729
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||  || ||| ||||| |    
T  10827901 ggtcacagtccaatcatacacaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattca 10827802  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattca 199  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  10827801 cattcaatcaatgcaatttaagttcattttcctaaatgtctttacaatttacttgtttcttttgagcaattca 10827729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 11021693 - 11021521
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||  || ||| ||||| |    
T  11021693 ggtcacagtccaatcatacacaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattca 11021594  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattca 199  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  11021593 cattcaatcaatgcaatttaagttcattttcctaaatgtctttacaatttacttgtttcttttgagcaattca 11021521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 18752681 - 18752862
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||| |  |||  |||||| |||||||||||||| |||||||||  || ||| ||| |||    
T  18752681 ggtcacaattcaatcataca--aaacttacgctcaaattatccgtatggaatcgagaaatgagtcacaagttgcaatgtatgaatctgtgtaccaactta 18752778  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||||||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||||| |||||| |||||||||||    
T  18752779 cattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgtttcttttgagtaattca-tttacttttat 18752862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 10864190 - 10864314
Alignment:
Q  76 gaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaat 174  Q
    |||||||||||||||||||||||||| |||||||||  || ||| ||||| ||||||||||||||||||||||||| |||||| |||| ||| |||||||    
T  10864190 gaagagagaaacgagtcacaagttgcaatgtatgaatctgtgtaccaattcacattcaatcaatgcaatttaagttcattttcctaaatgtccttacaat 10864289  T
Q  175 ttacttgtttcttttgagcaattca 199  Q
    |||||||||||||||||||||||||    
T  10864290 ttacttgtttcttttgagcaattca 10864314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 10478295 - 10478135
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||| |||||| |||||||||||||||| ||||| ||   | ||||||||||||| ||||||    |||||||||  || ||| |||||||    
T  10478295 ggtcacaattcaaccatacagaaaacttacactcaaactatccacattta-gagagaaacgagttacaagtcaaaatgtatgaatctgtgtaccaattta 10478197  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagtc-tttacaatttacttgtttcttt 188  Q
    |||||||| | |||||||||||||| |||||||||| || ||| ||||||||||||||||||    
T  10478196 cattcaattagtgcaatttaagtttgttttcttaaattcttttgcaatttacttgtttcttt 10478135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 24876471 - 24876398
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgc 101  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  24876471 ggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgc 24876398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 16713377 - 16713223
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||| |||||||||| |||| |||   | ||||||||||||| | ||||  | ||||||||| ||| ||| |||||||    
T  16713377 ggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattca-gagagaaacgagtaataagtcacgatgtatgaatatgtgtaccaattta 16713279  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgtt 183  Q
    ||||||||  ||||||||||||||||||   ||||| || || |||||||||||||    
T  16713278 cattcaatttatgcaatttaagtttattcctttaaattccttgcaatttacttgtt 16713223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 17687613 - 17687459
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||| |||||||||| |||| |||   | ||||||||||||| | ||||  | ||||||||| ||| ||| |||||||    
T  17687613 ggtcacaattcaatcatacagaaaacgtacactcaaactatctgcattca-gagagaaacgagtaataagtcacgatgtatgaatatgtgtaccaattta 17687515  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgtt 183  Q
    ||||||||  ||||||||||||||||||   ||||| || || |||||||||||||    
T  17687514 cattcaatttatgcaatttaagtttattcctttaaattccttgcaatttacttgtt 17687459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 41239328 - 41239201
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||||||| |||||| |||||| |   | ||||||||||||| ||||||  | |||||||||  || ||| |||||||    
T  41239328 ggtcacaattcaatcatacataaaacttacgctcaaactatccggattca-gagagaaacgagtaacaagtcacaatgtatgaatctgtgtaccaattta 41239230  T
Q  128 cattcaatcaatgcaatttaagtttattt 156  Q
    |||| ||||||||||||||| ||||||||    
T  41239229 catttaatcaatgcaatttacgtttattt 41239201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 15758584 - 15758677
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    |||| ||||||||| ||||||||| |||||||||||||||| ||| |||| |  |||| || |||||||||||||||||| | |||||||||||    
T  15758584 aaagaggtcacaattcaatcatactcaaaacttacactcaatattgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatg 15758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 156
Target Start/End: Original strand, 18450811 - 18450938
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||| |||||| |||||||||||| ||| ||| ||||   | ||||||||||||| ||||||    |||||||||  || ||| |||| ||    
T  18450811 ggtcacaattcaaccatacagaaaacttacacttaaactattcgcattta-gagagaaacgagtaacaagtcataatgtatgaatttgtgtaccaatgta 18450909  T
Q  128 cattcaatcaatgcaatttaagtttattt 156  Q
    |||||||||||||||||||| ||||||||    
T  18450910 cattcaatcaatgcaatttatgtttattt 18450938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 11989502 - 11989417
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaac 112  Q
    ||||||||| |||||||||  ||||||||||||||| | |||||| |  |||| || |||||||||| ||||||| ||||||||||    
T  11989502 ggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtcataagttgcaatgtatgaac 11989417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 1978325 - 1978237
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    ||||||||| ||||||||| ||||| |||||||||| ||| |||| |   ||| || |||||||||||||||||| | |||||||||||    
T  1978325 ggtcacaattcaatcatactcaaaatttacactcaatattgtccgtatgaaagcgacaaacgagtcacaagttgcaaagtatgaacatg 1978237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 7e-64; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 22593771 - 22593942
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  22593771 ggtcacaattcaatcatacaaaaaacttacactcaaattatgcgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 22593870  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattc 198  Q
     ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  22593871 tattcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttgagcaattc 22593942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 34827731 - 34827556
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||  |||||||||||||||||||||||||  ||||||||||||| ||| |||||||    
T  34827731 ggtcacaattcaatcatacaaaaaacttacactcaaattatctgcatggaagagagaaacgagtcacaagttgtaatgtatgaacatgtgtaccaattta 34827632  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  34827631 cattcaatcaatgcaatttaagttcattttcttaaatgtctttacagtttacttgtttcttttgagcaattcattt 34827556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 21256579 - 21256406
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||       |||||||||||| ||| ||    
T  21256579 aaagtggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaa-------tgtatgaacatgtgtacca 21256487  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21256486 atttacattcaatcaatgcaatttaagtttattttcttaaatgtctttacaatttacttgtttcttttgagcaattcattt 21256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 10480506 - 10480336
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||||||||||||||||||||||||||||| || ||||||||   ||||||||||| |||| |||||||| ||||||||||||| ||| |||||||    
T  10480506 ggtcacaatccaatcatacacaaaacttacactcgaactatccgcattcaagagagaaacaagtcgcaagttgcaatgtatgaacatgtgtaccaattta 10480407  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| ||| ||||||||    
T  10480406 cattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgtttatttcgagcaatt 10480336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 23769478 - 23769329
Alignment:
Q  39 aatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaa 138  Q
    |||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||| | ||||||||||||| ||| ||||||||||||||||||    
T  23769478 aatcatacacaaaatttacactcaaattatccgcattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaatttacattcaatcaa 23769379  T
Q  139 tgcaatttaagtttattttcttaa-agtctttacaatttacttgtttctt 187  Q
    |||||||||||||| || ||||||  |||||| |||||||||||||||||    
T  23769378 tgcaatttaagtttgttctcttaattgtctttgcaatttacttgtttctt 23769329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 23815099 - 23814916
Alignment:
Q  28 ggtcacaatccaatcatacacaaaa-cttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| | |||||||| |||| |||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  23815099 ggtcacaattctatcatacaaaaaaacttacactaaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattt 23815000  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||| || |||||||| ||||||||||| |||       ||||||||||||||||||||||||||||||||||||    
T  23814999 acattcaatcaatacactttaagttcattttcttaaatgtctttgcagtttacaatttacttgtttcttttgagcaattcattt 23814916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 37130432 - 37130614
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||| |||| |||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  37130432 ggtcgcaattcaatcatacaaaaaacttacaatcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 37130531  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||| | ||||||||||| |||| |||||| |||       |||||| |||||||||||||||||||||||||||||    
T  37130532 cattcaatcagtacaatttaagttcatttccttaaatgtctttataatttacagtttacttgtttcttttgagcaattcattt 37130614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 28567825 - 28567644
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  28567825 ggtcacaattctatcataca-aaaacttacactcaaattatccgcatggaagagagaaatgagtcacaagttgcaatgtatgaacatgtgtaccaattta 28567727  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttac-------ttgtttcttttgagcaattcattt 202  Q
    ||||||||||||  |||||||||| |||| |||||| |||||| ||||||||       ||||||||||||||||||||||||    
T  28567726 cattcaatcaatataatttaagttcatttccttaaatgtctttgcaatttacaacttaattgtttcttttgagcaattcattt 28567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 21905078 - 21904916
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||| ||||||||||| |||||||||||||||| ||||| ||   ||||||| ||||||||||||||| | ||||||||||||| ||| |||||||    
T  21905078 ggtcacaaaccaatcatacaaaaaacttacactcaaactatccacattcaagagaggaacgagtcacaagttacaatgtatgaacatgtgtaccaattta 21904979  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgtttctttt 189  Q
    ||||||||||||||||||||||||| || ||||||  |||||| |||||| ||||||||||||    
T  21904978 cattcaatcaatgcaatttaagtttgttctcttaattgtctttgcaattttcttgtttctttt 21904916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 23829912 - 23829764
Alignment:
Q  62 aaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttctta 161  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| |||||||||    
T  23829912 aaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacattcaatcaatacactttaagttcattttctta 23829813  T
Q  162 aa-gtctt-------tacaatttacttgtttcttttgagcaattcattt 202  Q
    || |||||       ||||||||||||||||||||||||||||||||||    
T  23829812 aatgtctttgcagtctacaatttacttgtttcttttgagcaattcattt 23829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 25349381 - 25349247
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||   ||||||| ||||||||| ||||||| ||||||| | ||| ||| |||||||    
T  25349381 ggtcacaatcaaatcatacacaaaacttacactcaaactatccgcattcaagagaggaacgagtcataagttgcaatgtatggatatgtgtaccaattta 25349282  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaa 162  Q
    |||||||||||||||||||||||| ||||||||||    
T  25349281 cattcaatcaatgcaatttaagttcattttcttaa 25349247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 23803469 - 23803285
Alignment:
Q  28 ggtcacaatccaatcatacacaaaa-cttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| | |||||||| |||| ||| |||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||| ||| ||||||    
T  23803469 ggtcacaattctatcatacaaaaaaacttgcactcaaattatccgcatggaagagagaaacgagtaacaagttgcaatgtatgaacatgtgtaccaattt 23803370  T
Q  127 acattcaatcaatgca-atttaagtttattttcttaaa-gtctt-------tacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||| ||  |||||||| |||||||||||  ||||       ||||||||||||||||||||||||||||||||||    
T  23803369 acattcaatcaatacacttttaagttcattttcttaaatatctttacaatctacaatttacttgtttcttttgagcaattcattt 23803285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 16664786 - 16664603
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||| |||||| |  |||| || |||||||||||||||||| |||||||||  |  ||| |||  ||    
T  16664786 ggtcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatgtatgaatctatgtaccaaccta 16664687  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||| ||||||||||||||||| ||||  ||||| |||||| |||||||||||||| ||||||| |||||| |||||||||||    
T  16664686 cattcagtcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgtttattttgagtaattca-tttacttttat 16664603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 23870631 - 23870539
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||  |||    |||||||||||||||||||||||| |||||||||||||    
T  23870631 aaagtggtcacaattcaatcatacaaaaaacttacactcaaattatttgcacgagagagagaaacgagtcacaagttgcaatgtatgaacatg 23870539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 31817945 - 31818120
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||||| |||  |||| |||| |||||| |||||| |  |||| || |||||||||||||||||| || |||||| ||| ||| ||| |||    
T  31817945 ggtcacaattcaatcgtactaaaaatttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatatatgaatatgagtaccaactta 31818044  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||| |||||||||||| | || ||||  ||||| || ||| |||||||||||||| ||||||| |||||||||    
T  31818045 cattcagtcaatgcaatttcaattcatttctttaaatgtttttgcaatttacttgtttattttgagtaattcattt 31818120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 20524168 - 20524274
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||   |||||| |||||||||||||||||| |||||||||  |  ||| ||||||||    
T  20524168 gtcacaattcaatcatacagaaaacttacactcaaactatccgcatttaagagaaaaacgagtcacaagttgcaatgtatgaatttttgtaccaatttac 20524267  T
Q  129 attcaat 135  Q
    |||||||    
T  20524268 attcaat 20524274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 22880975 - 22881149
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||  ||||| ||  |||||| |||||| |   ||| || |||||||||||||||||| ||||||||| ||| ||| ||| ||||    
T  22880975 gtcacaattcaatcatactaaaaacatatgctcaaactatccgtatgaaagcgataaacgagtcacaagttgcaatgtatgaatatgtgtaccaagttac 22881074  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||| |||||| ||||||| |  ||||  ||||| |||||| |||||||||||||| ||||||| |||||||||    
T  22881075 attcactcaatgaaatttaaatgcatttctttaaatgtctttgcaatttacttgtttattttgagtaattcattt 22881149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 22708194 - 22708286
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    |||||||||||||| |||| ||||| |||||||||||| ||||||||||||   ||||||||||||| |||||| |||| |||||||||||||    
T  22708194 aaagtggtcacaattcaattatacaaaaaacttacacttaaattatccgcatgcaagagagaaacgaatcacaaattgcaatgtatgaacatg 22708286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 30090023 - 30089867
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgta-tgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||| |   ||||||||| |||| ||||||  | ||||| |||| ||| ||| ||||||    
T  30090023 ggtcacaattcaatcatacagaaaacttacactcaaactatccgc-attcagagagaaatgagtaacaagtcacaatgtattgaatatgtgtaccaattt 30089925  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||||| || |||||||||| ||||||||  ||||| | |||| |||||||||||||    
T  30089924 acattcagtctatgcaatttacgtttatttctttaaattcctttgcaatttacttgtt 30089867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 30126628 - 30126472
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgta-tgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||| |   ||||||||| |||| ||||||  | ||||| |||| ||| ||| ||||||    
T  30126628 ggtcacaattcaatcatacagaaaacttacactcaaactatccgc-attcagagagaaatgagtaacaagtcacaatgtattgaatatgtgtaccaattt 30126530  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||||| || |||||||||| ||||||||  ||||| | |||| |||||||||||||    
T  30126529 acattcagtctatgcaatttacgtttatttctttaaattcctttgcaatttacttgtt 30126472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 30052008 - 30051852
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgta-tgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||| |   |||||||||||||| ||||||  | ||||| ||||  || ||| ||||||    
T  30052008 ggtcacaattcaatcatacagaaaacttacactcaaactatccgc-attcagagagaaacgagtaacaagtcacaatgtattgaatctgtgtaccaattt 30051910  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||||| || ||||||||||  |||||||  ||||| | |||| |||||||||||||    
T  30051909 acattcagtctatgcaatttacttttatttctttaaattcctttgcaatttacttgtt 30051852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 30143052 - 30142896
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgta-tgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||| |   |||||||||||||| ||||||  | ||||| ||||  || ||| ||||||    
T  30143052 ggtcacaattcaatcatacagaaaacttacactcaaactatccgc-attcagagagaaacgagtaacaagtcacaatgtattgaatctgtgtaccaattt 30142954  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||||| || ||||||||||  |||||||  ||||| | |||| |||||||||||||    
T  30142953 acattcagtctatgcaatttacttttatttctttaaattcctttgcaatttacttgtt 30142896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 20442245 - 20442371
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||| |||||||||| ||||| ||||||||   | |||| |||||||| ||||||  | |||||||||  |  ||| ||||||||    
T  20442245 gtcacaattcaatcatacagaaaacttacaatcaaactatccgcattca-gagataaacgagtaacaagtcacaatgtatgaatctctgtaccaatttac 20442343  T
Q  129 attcaatcaatgcaatttaagtttattt 156  Q
    |||| |||||||||||||| ||||||||    
T  20442344 attcgatcaatgcaatttacgtttattt 20442371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 25966243 - 25966132
Alignment:
Q  78 agagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaag-tctttacaattt 176  Q
    |||||||||||||| | ||||  | |||||||||   | ||| |||||||| ||||||||| ||||||||||||| |||||||||||  |||| ||||||    
T  25966243 agagagaaacgagttaaaagtcacaatgtatgaatccgtgtatcaatttactttcaatcaacgcaatttaagtttgttttcttaaagccctttgcaattt 25966144  T
Q  177 acttgtttcttt 188  Q
    ||||||| ||||    
T  25966143 acttgttacttt 25966132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 183
Target Start/End: Complemental strand, 20281254 - 20281099
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| || ||||||| |||| ||||||||| | ||||||||   | ||||||||||||| ||||||    ||||||||   || ||| |||||||    
T  20281254 ggtcacaattcagtcatacagaaaatttacactcatactatccgcattca-gagagaaacgagtaacaagtcagaatgtatgattctgtgtaccaattta 20281156  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtt 183  Q
    ||||| ||| |||||||||| ||||||||| ||||| | | || |||||||||||||    
T  20281155 cattcgatctatgcaatttacgtttatttttttaaattccattgcaatttacttgtt 20281099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 23995765 - 23995665
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||| |||||||||||||||| |||| || |   |||||||||||||| ||||||  | |||||||||  || ||| ||||||||    
T  23995765 gtcacaattcaatcatacagaaaacttacactcaaactatctgc-atttagagagaaacgagtaacaagtcacaatgtatgaatctgtgtaccaatttac 23995667  T
Q  129 at 130  Q
    ||    
T  23995666 at 23995665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 22633854 - 22633938
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  22633854 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 22633938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 22648603 - 22648687
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  22648603 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 22648687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 12346 - 12526
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||| ||| ||    
T  12346 aaagaggtcacaaatcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacaagtcacaagttgcaatgtatgaacatgtgtacca 12445  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12446 atttgcattcaaccaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttgagcaattcattt 12526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 132556 - 132373
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||||||||| ||||||||  |||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  132556 ggtcacaattcaatcatacaaaaaacttacacgcaaattatttgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 132457  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  132456 cattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgtttcttttgagcaattca-tttacttttat 132373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 43135687 - 43135505
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||| |||||||    
T  43135687 ggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgtaatgtatgaacatgtgtaccaattta 43135588  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctt-------tacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||| ||||||||||| ||||||||||| |||||       ||||||||||||||||||||||| ||||||||||    
T  43135587 cattcaatcaatacaatttaagttcattttcttaaatgtctttgcaatatacaatttacttgtttcttttgaacaattcattt 43135505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 12844674 - 12844499
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||| | |||| |  |||| ||  ||||||| ||||||||| ||||||||| |||   | ||| |||    
T  12844674 ggtcacaattcaatcatactaaaaacttacgctcaaactgtccgtatggaagcgactaacgagttacaagttgcaatgtatgaaaatgtacaccaactta 12844575  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||||||||| | |  ||||  ||||| |||||| |||||||||||||| |||| || |||||||||    
T  12844574 cattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttacttgtttattttaagtaattcattt 12844499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 13101856 - 13101990
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||| | ||| |||||| ||||| |||||||||| ||||||||   | ||||||||||||| |||||| |  |||||| ||  || ||| |||||||    
T  13101856 ggtcacagttcaaccatacagaaaacatacactcaaactatccgcattta-gagagaaacgagttacaagtcgaaatgtataaatctgtgtaccaattta 13101954  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa 163  Q
    ||||||||||||| ||||||||||| ||||||||||    
T  13101955 cattcaatcaatgtaatttaagtttgttttcttaaa 13101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 13023904 - 13024022
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  |||||||||||||||||| |||| |  ||||  |   |||||||||||||||| ||||||||| ||| ||| ||| |||    
T  13023904 ggtcacaattcaatcatactaaaaacttacactcaaattgtccgtatggaagccactgacgagtcacaagttgcaatgtatgaatatgtgtaccaactta 13024003  T
Q  128 cattcaatcaatgcaattt 146  Q
    |||||||||||| ||||||    
T  13024004 cattcaatcaattcaattt 13024022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 22445017 - 22445126
Alignment:
Q  93 acaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttga 191  Q
    ||||||||| |||||||||  || ||| ||| ||||||| | ||||| ||||||||||| ||||  ||||| |||||| |||||||||||||| ||||||    
T  22445017 acaagttgcaatgtatgaatttgtgtaccaacttacatttagtcaatccaatttaagttcatttctttaaatgtctttgcaatttacttgtttattttga 22445116  T
Q  192 gcaattcatt 201  Q
    | ||||||||    
T  22445117 gtaattcatt 22445126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 55002468 - 55002306
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtc-acaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||| ||||||||||| |||| ||||||||   | |||| | | ||||  ||||||  | |||||||||  || ||| |||| |    
T  55002468 ggtcacaattcaatcatacaaaaaacttacacgcaaactatccgcattta-gagacagatgagtttacaagtcacaatgtatgaatctgtgtatcaatct 55002370  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaagtc-tttacaatttacttgtttctttt 189  Q
    || ||||||||||||||||||| ||| |||||||||| || ||| |||| ||||||||||||||    
T  55002369 actttcaatcaatgcaatttaaatttgttttcttaaattcatttgcaatctacttgtttctttt 55002306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 1934702 - 1934596
Alignment:
Q  78 agagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaagtctttacaattta 177  Q
    |||||||||||||| ||||||  | || ||||||  || ||| ||| |||||||||||  |||||||||||||||||| | ||||| || || |||||||    
T  1934702 agagagaaacgagtaacaagtcacaatatatgaatctgtgtaccaacttacattcaatttatgcaatttaagtttattcttttaaattccttgcaattta 1934603  T
Q  178 cttgttt 184  Q
    |||||||    
T  1934602 cttgttt 1934596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 12491947 - 12492066
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  |||||||||||| || | | |||| |  |||| || |||||||||||||||||| ||||||||||||| | | ||| ||    
T  12491947 ggtcacaattcaatcatactaaaaacttacactaaataatgtccgtatggaagcgacaaacgagtcacaagttgcaatgtatgaacatgtgcaccaactt 12492046  T
Q  127 acattcaatcaatgcaattt 146  Q
      ||||| ||||||||||||    
T  12492047 ttattcagtcaatgcaattt 12492066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 12021584 - 12021422
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaa-ttatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaac 121  Q
    |||| ||||||||| |||||||||  |||||||||||||||| || | || |  |||| || |||| ||||||||||||| ||||||||| ||| | | |    
T  12021584 aaagaggtcacaattcaatcatactaaaaacttacactcaaaattgttcgtatggaagcgacaaacaagtcacaagttgcaatgtatgaatatgtgcacc 12021485  T
Q  122 aatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtt 183  Q
    || ||||||||| |||  ||||||| | |  ||||  ||||| |||||| |||||||||||||    
T  12021484 aacttacattcagtcatggcaatttcaatacatttctttaaatgtctttgcaatttacttgtt 12021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 152
Target Start/End: Complemental strand, 14345585 - 14345555
Alignment:
Q  122 aatttacattcaatcaatgcaatttaagttt 152  Q
    |||||||||||||||||||||||||||||||    
T  14345585 aatttacattcaatcaatgcaatttaagttt 14345555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 14133335 - 14133486
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||| | |||||||| ||||||| ||||||||   | ||||||||||||| ||||||  | |||||||||  |  ||| |||| |||    
T  14133335 gtcacaattcaatcataaa-aaaacttatactcaaactatccgcattca-gagagaaacgagtaacaagtcacaatgtatgaatctatgtaccaatatac 14133432  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgt 182  Q
    |||||||  ||| |||||||||| |||   ||||| || || ||||||||||||    
T  14133433 attcaatttatgaaatttaagttcattcctttaaattccttgcaatttacttgt 14133486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 10139791 - 10139875
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  10139791 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 10139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 10171158 - 10171242
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  10171158 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 10171242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 191
Target Start/End: Original strand, 27131729 - 27131900
Alignment:
Q  21 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaa 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||  |||||||||||| |||     
T  27131729 ggaaagtggtcacaatcctatcatacacaaaacttacactcaaattatcctcatggaagagagaaacgagtcacaagttgcactgtatgaacatgtgtac 27131828  T
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttga 191  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  27131829 caatttacatccaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttttttcttttga 27131900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 21168448 - 21168275
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||| ||| |||| ||    
T  21168448 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtagcaatcta 21168350  T
Q  128 cattcaatcaatgcaatttaagtttattttctta-aagtctttacaatttacttgtttcttttgagcaattcatt 201  Q
    |||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  21168349 cattcaatcaatgcaatttaagttcattttcttacatgtctttgcaatttacttgtttcttttgagcaattcatt 21168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 4361746 - 4361567
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||  |||||||||||||||| ||||||||| || |||||||||| ||| |||||||    
T  4361746 ggtcacaattcaatcatacaaaaaacttatactcaaattatccgcatggaagagagaaacgagtaacaagttgcaatatatgaacatgtgtaccaattta 4361647  T
Q  128 cattcaatcaatgcaat----ttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4361646 cattcaatcaatgcaatttaattaagttcattttcttaaatgtctttacaatttacttgtttcttttgagcaattcattt 4361567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 32 - 202
Target Start/End: Complemental strand, 2603584 - 2603413
Alignment:
Q  32 acaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgag-tcacaagttgctatgtatgaacatgcgtaacaatttacat 130  Q
    ||||| |||||||||| |||||||| ||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||  || ||||||||||    
T  2603584 acaattcaatcataca-aaaacttaaactcaaattatccgcatggaagagagaaacgagatcacaagttgcaatgtatgaacatgtataccaatttacat 2603486  T
Q  131 tcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  2603485 tcaatcaatgcaatttaagttcattttcttaaatgtctttacaatttacttgtttcttttgagtaattcattt 2603413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 27902049 - 27902204
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  27902049 ggtcacaatccaatcatacacaaaacttacactcaaattatccacatggaagagagaaaggagtcacaagttgcaatgtatgaacatgtgtaccaattta 27902148  T
Q  128 cattcaatcaatgcaatttaagttta-ttttcttaaagtctttacaatttacttgt 182  Q
    |||||||||||||||||||||||| | |||||| || |||||| ||||||||||||    
T  27902149 cattcaatcaatgcaatttaagttcatttttctaaatgtctttgcaatttacttgt 27902204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 21382154 - 21381966
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||| |||||| || |||||||||| ||| |||||||||||||||| ||||  |||||||||||||||||||||||| | ||||||||||||| ||| ||    
T  21382154 aaaggggtcacgattcaatcatacaaaaagcttacactcaaattattcgcatggaagagagaaacgagtcacaagttacaatgtatgaacatgtgtacca 21382055  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    || || |||| |||||||||||||||||| ||||||||||| |||||||||  || |||||||||||||||||||||| |||||||||||    
T  21382054 atctatattcgatcaatgcaatttaagttcattttcttaaatgtctttacacctttcttgtttcttttgagcaattca-tttacttttat 21381966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 16406879 - 16406710
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    ||||||| || ||||||||| ||||||||||| ||| ||||| ||   |||||||||||||||||||||||   ||||||||||||| ||| ||||| ||    
T  16406879 gtcacaaaccgatcatacacgaaacttacacttaaactatccacattcaagagagaaacgagtcacaagttataatgtatgaacatgtgtaccaattgac 16406780  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  16406779 attcaatcaatgcaatttaagtttattttcttaaatgtctttgcaatttacttgtttcttttaagcaatt 16406710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 21076589 - 21076765
Alignment:
Q  27 tggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    |||||||||| |||||||||  ||||||||||||||||||||||| |  |||| ||   |||||||| ||||||| ||||||||| ||| ||| ||| ||    
T  21076589 tggtcacaattcaatcatactaaaaacttacactcaaattatccgtatggaagcgactgacgagtcataagttgcaatgtatgaatatgtgtaccaactt 21076688  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||| | |  ||||  ||||| |||||| |||||||||||||| ||||||| |||||||||    
T  21076689 acattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttacttgtttattttgagtaattcattt 21076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 23511640 - 23511815
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||| |||||| |  |||| || |||||||||||||||||| ||||||||| ||| ||| ||| |||    
T  23511640 ggtcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatgtatgaatatgtgtaccaactta 23511739  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||| |||||||||||||| |  ||||  ||||| | |||| |||||||||||||| ||||||| |||||||||    
T  23511740 cattcagtcaatgcaatttaaatacatttctttaaatgcctttgcaatttacttgtttattttgagtaattcattt 23511815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 50826413 - 50826583
Alignment:
Q  32 acaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacatt 131  Q
    ||||| |||||||||| |||||||||||||||||||||||    |||| ||||||||||||||| ||||| || ||||||  || | |  || |||||||    
T  50826413 acaattcaatcataca-aaaacttacactcaaattatccgtttggaagcgagaaacgagtcacaggttgcaatctatgaatctgtgcactaacttacatt 50826511  T
Q  132 caatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||| ||||  ||||| |||||| ||||||||||||||||||| || |||||||||    
T  50826512 caatcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgtttcttttaagtaattcattt 50826583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 4229963 - 4229781
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| | ||||||| |||||| ||||||||  ||||||| |||||||||||||||||| ||||||||| ||| ||| ||| |||    
T  4229963 ggtcacaattctatcatacaaataacttacgctcaaactatccgcatggaagagataaacgagtcacaagttgcaatgtatgaatatgtgtaccaactta 4229864  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaa-agtctttacaattt-------acttgtttcttttgagcaattcattt 202  Q
    |||||||||||  ||||| ||||| ||||  ||||  |||||||||||||       ||||||||||||||||||||| ||||    
T  4229863 cattcaatcaacacaattcaagttcatttctttaagtgtctttacaatttacaattcacttgtttcttttgagcaatttattt 4229781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 21550555 - 21550678
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| |||||||||| |||||||||||||||| ||||||||   | ||||||||||||| ||||||  | ||||||||| ||| ||| |||||||||    
T  21550555 tcacaattcaatcatacagaaaacttacactcaaactatccgcattca-gagagaaacgagtaacaagtcacaatgtatgaatatgtgtaccaatttaca 21550653  T
Q  130 ttcaatcaatgcaatttaagtttat 154  Q
    |||||||||||||||||| ||||||    
T  21550654 ttcaatcaatgcaatttacgtttat 21550678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 197
Target Start/End: Original strand, 21137687 - 21137855
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| |||||||||  ||||||||| |||||| |||||| |  |||| || |||||||||||||||||| ||||||||| ||| ||| ||| |||||    
T  21137687 tcacaattcaatcatactaaaaacttacgctcaaactatccgtatggaagcgataaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttaca 21137786  T
Q  130 ttcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    |||| |||||||||||| | |  ||||  ||||| | |||| |||||||||||||| ||||||| ||||    
T  21137787 ttcagtcaatgcaatttcaatacatttctttaaatgcctttgcaatttacttgtttattttgagtaatt 21137855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 18530668 - 18530736
Alignment:
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtttcttt 188  Q
    |||||||||||||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||||    
T  18530668 caatttacattcaatcaatgcaatttaagtttgttttcttaaattcctttgcaatttacttgtttcttt 18530736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 22684744 - 22684625
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||| ||||| | | |||| |  |||| || ||| |||||||||||||| | |||||||| || ||| ||| ||    
T  22684744 ggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtcacaagttgcaaagtatgaacctgtgtaccaactt 22684645  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||||||||||||||||||    
T  22684644 tcattcaatcaatgcaattt 22684625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 31845764 - 31845645
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| ||||||||| |||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | ||||||| ||| | | ||||||    
T  31845764 ggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattt 31845665  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| ||||  ||||||||    
T  31845664 tcattaaatctttgcaattt 31845645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 21310759 - 21310847
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||| ||||||| |||||||||||||    
T  21310759 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcagaagttgcaatgtatgaacatg 21310847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 29305248 - 29305336
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||||||    
T  29305248 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatg 29305336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 8886 - 8716
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||   ||||||||||||||||||||||| | ||||||||||||| ||| |||||||    
T  8886 ggtcacaatccaatcatacacaaaacttacactcaaactatccacattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaattta 8787  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||    
T  8786 cattcaatcaatgcaatttaagtttattctcttaaatgtctttgcaatttacttgtttcttttaagcaatt 8716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 18735401 - 18735574
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||||| ||||||||| ||  ||| |||| ||    
T  18735401 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagaaagaaacgagtcacaagttgcaatgtatgaatatctgtaccaatcta 18735499  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcatt 201  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  18735500 cattcaatcaatgcaatttaagttcattttcttaaatgtctttgcaatttacttgtttcttttgagcaattcatt 18735574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 15911743 - 15911913
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||| | ||||||||||||| ||| |||||||    
T  15911743 ggtcacaaaccaatcatacacaaaacttacactcaaactatccgcattcaagagagaaacgagtcacaagttacaatgtatgaacatgtgtaccaattta 15911842  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||||||||||||||||||| || ||||||  ||||||||||||||||||||| |||| |||||||    
T  15911843 cattcaatcaatgcaatttaagtttgttctcttaattgtctttacaatttacttgtttgttttaagcaatt 15911913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 22698205 - 22698023
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  22698205 ggtcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 22698106  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctt-------tacaatttacttgtttcttttgagcaattcattt 202  Q
    || ||||||||| || |||||||| ||||||||||| |||||       |||||||||||||||||||||||| |||||||||    
T  22698105 cagtcaatcaatacattttaagttcattttcttaaatgtcttggcagtctacaatttacttgtttcttttgagtaattcattt 22698023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 15337344 - 15337518
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| | |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  15337344 tcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttaca 15337443  T
Q  130 ttcaatcaatgcaatttaagtttattttctt-aaagtc-------tttacaatttacttgtttcttttgagcaat 196  Q
    |||||||||| ||||||||||| |||| ||| ||||||       ||||||||||||||||||||||||||||||    
T  15337444 ttcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaat 15337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 15426409 - 15426583
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| | |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  15426409 tcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttaca 15426508  T
Q  130 ttcaatcaatgcaatttaagtttattttctt-aaagtc-------tttacaatttacttgtttcttttgagcaat 196  Q
    |||||||||| ||||||||||| |||| ||| ||||||       ||||||||||||||||||||||||||||||    
T  15426509 ttcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaat 15426583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 15517713 - 15517887
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| | |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||    
T  15517713 tcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagcaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttaca 15517812  T
Q  130 ttcaatcaatgcaatttaagtttattttctt-aaagtc-------tttacaatttacttgtttcttttgagcaat 196  Q
    |||||||||| ||||||||||| |||| ||| ||||||       ||||||||||||||||||||||||||||||    
T  15517813 ttcaatcaatacaatttaagttcatttccttaaaagtctttgcaatttacaatttacttgtttcttttgagcaat 15517887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 27818211 - 27818390
Alignment:
Q  21 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaat--tatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgt 118  Q
    |||||| |||||||||||||| |||||||||||||||||| |||   |||||  |   ||||||||||||||||||||||||| ||||||||||||| ||    
T  27818211 ggaaaggggtcacaatccaatgatacacaaaacttacacttaaaaactatccatatgcaagagagaaacgagtcacaagttgcaatgtatgaacatgtgt 27818310  T
Q  119 aacaatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    | |||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| |||  |||||||    
T  27818311 accaatttacattcaatcaatgcaatttaagtttgttttcttaaatgtctttgcaatttacttgtttatttcaagcaatt 27818390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 22698835 - 22698675
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||  | ||||||||| |||| |||| |    ||||||||| |||| || |||||||    
T  22698835 ggtcacaattcaaccatacagaaaacttacactcaaattatccgcat-gtagagagaaatgagttacaaatcaaaatgtatgaatatgcataccaattta 22698737  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtttcttt 188  Q
    | ||||||||||||||||||||||| ||| |||||| | |||| ||||||||||||||||||    
T  22698736 ctttcaatcaatgcaatttaagtttgtttccttaaattccttttcaatttacttgtttcttt 22698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 41438951 - 41438768
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||| |||||| |  |||| ||  ||||||||||||||||| ||||||||| |||  || ||| |||    
T  41438951 ggtcacaattcaatcatactaaaaacttacgctcaaaatatccgtatggaagcgatgaacgagtcacaagttgcaatgtatgaatatgtataccaactta 41438852  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    ||| || |||||||||||| | |  ||||  ||||| |||||| |||||||||||||| ||||||| |||||| |||||||||||    
T  41438851 catccagtcaatgcaatttcaatacatttctttaaatgtctttgcaatttacttgtttattttgagtaattca-tttacttttat 41438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 29708273 - 29708103
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||||| || | |  |||| ||  ||||||||||||||||| ||||||||| ||| | | ||| |||    
T  29708273 ggtcacaattcaatcatactaaaaacttacgctcaaattgtctgtatggaagcgactaacgagtcacaagttgcaatgtatgaatatgtgcaccaactta 29708174  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||||||||||||| | |  ||||  ||||| || ||| |||||||||||||| ||||||| ||||    
T  29708173 cattcaatcaatgcaatttcaatacatttctttaaatgtttttgcaatttacttgtttattttgagtaatt 29708103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 25389090 - 25388980
Alignment:
Q  27 tggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatt 125  Q
    |||||||||| ||||||||| |||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | ||||||||||| | | |||||    
T  25389090 tggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaatt 25388991  T
Q  126 tacattcaatc 136  Q
    | |||| ||||    
T  25388990 ttcattaaatc 25388980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 17637949 - 17637818
Alignment:
Q  53 cttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagttt 152  Q
    |||||||||||| ||||||||   | ||||||||||||| ||||||  | |||||||||   | ||| ||||||||||||||||||||||||||| ||||    
T  17637949 cttacactcaaactatccgcattca-gagagaaacgagtaacaagtcacaatgtatgaatccgtgtaccaatttacattcaatcaatgcaatttacgttt 17637851  T
Q  153 attttcttaaa-gtctttacaatttacttgttt 184  Q
     |||  |||||  || || ||||||||||||||    
T  17637850 gtttatttaaatttcatttcaatttacttgttt 17637818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 17840048 - 17839984
Alignment:
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgttt 184  Q
    |||||||| ||||||||||||||||||||||| | |||||||| | |||| ||||||||||||||    
T  17840048 caatttactttcaatcaatgcaatttaagtttgtcttcttaaattcctttgcaatttacttgttt 17839984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 16668066 - 16668026
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaa 63  Q
    |||||||||||||| |||||||||  |||||||||||||||    
T  16668066 aaagtggtcacaattcaatcatactaaaaacttacactcaa 16668026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 17426203 - 17426119
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  17426203 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 17426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 22352120 - 22352036
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  22352120 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 22352036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 9012 - 9184
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||  |||||||||||| ||||||||||||| ||||||||| ||| ||| |||| |||    
T  9012 gtcacaattcaatcataca-aaaacttacattcaaattatccgcatggaagagagaaacaagtcacaagttgcaatgtatgaatatgtgtaccaatctac 9110  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcatt 201  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  9111 attcaatcaatgcaatttaagttcattttcttaaatgtctttgcaatttacttgtttcttttgagcaattcatt 9184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 250192 - 250008
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||||||||||||||||| |||||||||  || ||| ||    
T  250192 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccatatggaagcgagaaacgagtcacaagttgcaatgtatgaatttgtgtacca 250093  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgtttcttttgagcaattcattttact 206  Q
    ||||||||||||||||| || |||||||||||||||||||  | ||||||| |||||||||||||||||| ||||| ||||||||    
T  250092 atttacattcaatcaatacattttaagtttattttcttaagtgcctttacattttacttgtttcttttgaacaatttattttact 250008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 70667 - 70848
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttaca 129  Q
    ||||||| |||||||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||  || |||||||||    
T  70667 tcacaattcaatcatacaaaatacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtttaccaatttaca 70766  T
Q  130 ttcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||  || ||||| |||||||||||||||| |||||||||||    
T  70767 ttcagtcaatgcaatttaagttcattttcttaaatgtctttacagctttcttgtctcttttgagcaattca-tttacttttat 70848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 1319 - 1482
Alignment:
Q  21 ggaaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaa 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||| |||| |||     
T  1319 ggaaagtggttacaatccaatcatacacaaaacttacactcaaattattcgcatggaagagagaaacgagtcacaagttgcaatgtatgatcatgtgtac 1418  T
Q  121 caatttacattcaatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgttt 184  Q
    |||||||||||||||||||||| ||||||||| |||||| ||  ||||| || |||||||||||    
T  1419 caatttacattcaatcaatgcagtttaagttttttttctaaatatctttgcattttacttgttt 1482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 10267247 - 10267433
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||| ||| ||    
T  10267247 aaagtggtcaaaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgaatcacaagttgcaatgtatgaacatgtgtacca 10267345  T
Q  123 atttacattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||       ||||||||||||||||||||||| |||||| |||||    
T  10267346 atttacattcaatcaatgcactttaagttcattttcttaaatgtctttgcaatttacaatttacttgtttctttttagcaatacattt 10267433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 49526566 - 49526412
Alignment:
Q  32 acaatccaatcatacacaaaacttacactcaaattatccgca-aagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacat 130  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  49526566 acaatccaatcatacacaaaacttacaatcaaactatccgcattcaaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaatttacat 49526467  T
Q  131 tcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgttt 184  Q
    |||||||||||||||||||||| |||||||||  |||||| ||||||||||||||    
T  49526466 tcaatcaatgcaatttaagtttgttttcttaattgtctttgcaatttacttgttt 49526412  T

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Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 1658617 - 1658797
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| | |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||| ||| ||| ||||    
T  1658617 gtcacaattctatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaatatgtgtaccaacttac 1658715  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaa-gtcttta-------caatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||| ||||| ||||| ||||  ||||| |||||||       ||||||||||||||||||||||||||||||||    
T  1658716 attcaatcaatacaattcaagttcatttctttaaatgtctttacaatttgcaatttacttgtttcttttgagcaattcattt 1658797  T

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Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 31079872 - 31079699
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaaca 122  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||| |||| |||| |||||||| ||| ||    
T  31079872 aaaggggtcacaattcaatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaaattgcaatgtgtgaacatgtgtacca 31079773  T
Q  123 atttacattcaatcaatgcaatttaagtttattttctt--aaagtctttacaatttacttgtttcttttgagca 194  Q
    || || |||| |||||||||||||||||| ||||| ||  || ||||||| |  || |||||||||||||||||    
T  31079772 atctatattcgatcaatgcaatttaagttcattttttttaaatgtctttagagctttcttgtttcttttgagca 31079699  T

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Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 50687566 - 50687747
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    |||||||| ||||||||||||||||||||||||||   ||||||||   |||||| ||||||||||||||||   ||||||||||||| ||| |||||||    
T  50687566 ggtcacaaaccaatcatacacaaaacttacactcaggctatccgcattcaagagacaaacgagtcacaagttataatgtatgaacatgtgtaccaattta 50687665  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaa-agtctttacaatttacttgtttcttttgagcaattcattttacttt 208  Q
    |||||||| |||||||||||||||| || ||||||  |||||| |||| |||||||||||||| || |||| || |||||||    
T  50687666 cattcaataaatgcaatttaagtttgttctcttaattgtctttgcaatctacttgtttcttttaagtaatttatcttacttt 50687747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 18567111 - 18566930
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  18567111 ggtcacaattctatcataca-aaaacttacactcaaattacccgcatggaagagagaaacgagtcacaagttgcaatgaatgaatatgtgtaccaattta 18567013  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||| |||| || |||||||| ||||||||||| |||       ||||||||||||||||||||||| ||||||||||||    
T  18567012 cattcaaacaatacactttaagttcattttcttaaatgtctttgcaatttacaatttacttgtttctttttagcaattcattt 18566930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 3078049 - 3077875
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||||||  ||||||||||||| |  ||||  ||||||||| |||||||||  |||||||||  || ||| ||| |||    
T  3078049 ggtcacaattcaatcataca-aaaacttaagctcaaattatccgtatggaagcaagaaacgagccacaagttgtaatgtatgaatctgtgtaccaactta 3077951  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||||||||||||||||||||| ||||  ||||| |||||| ||||||||||||||||||| ||  ||||||||    
T  3077950 cattcaatcaatgcaatttaagttcatttctttaaatgtctttgcaatttacttgtttcttttaagtgattcattt 3077875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 14022533 - 14022358
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  |||||||||||||||||| |||| | |||||  |   |||||||||||||||| ||||||||| ||| |||  || |||    
T  14022533 ggtcacaattcaatcatactaaaaacttacactcaaattgtccgtatagaagcaactgacgagtcacaagttgcaatgtatgaatatgtgtactaactta 14022434  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaag--tctttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||||||||| | |  | |||||| |||  || || |||||||||||||| ||||||| |||||||||    
T  14022433 cattcaatcaatgcaatttcaataca-tttctttaagtatcattgcaatttacttgtttattttgagtaattcattt 14022358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 183
Target Start/End: Complemental strand, 27812364 - 27812265
Alignment:
Q  84 aaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgtt 183  Q
    |||| ||||||||||||| ||||||||| |||  || |||||||||||||||  ||||||||||||||||||   ||||| || || |||||||||||||    
T  27812364 aaacaagtcacaagttgcaatgtatgaatatgtctaccaatttacattcaatttatgcaatttaagtttattcctttaaattccttgcaatttacttgtt 27812265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 27812434 - 27812389
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgca 73  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  27812434 ggtcacaattcaatcatacagaaaacttacactcaaattatccgca 27812389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 14249 - 14068
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  14249 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaattta 14151  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||||  | |||||||| ||||||||||| |||       |||||||||||||||||||||||||||| |||||||    
T  14150 cattcaatcaatttattttaagttcattttcttaaatgtctttgcaatttacaatttacttgtttcttttgagcagttcattt 14068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 7450 - 7631
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||    
T  7450 gtcacaattcaatcatacaaaaaacatacactcaaattatccgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtatcaacttac 7549  T
Q  129 attcaatcaatgcaatttaagtttattttcttaaa-gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
    ||||||||||| ||||| ||||| ||||  ||||| |||       ||||||||||||||||||||||||||||||||||||    
T  7550 attcaatcaatacaattaaagttcatttaattaaatgtctttacaatttacaatttacttgtttcttttgagcaattcattt 7631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 3722 - 3897
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| | | |||||||    
T  3722 ggtcacaattctatcatacaaaaaacttacactcaaattatccgcatggaagagagaaacgagtcacaagttgaaatgtatgaacatgtg-accaattta 3820  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttc-ttttgagcaattcattt 202  Q
     |||||||||||  |||| ||||| |||| ||||||  ||||||||||| ||||||||| |||||||||||||||||    
T  3821 tattcaatcaatataattcaagttcatttccttaaacatctttacaattcacttgtttctttttgagcaattcattt 3897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 7473 - 7635
Alignment:
Q  47 acaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaattt 146  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||| ||||| ||||||||  | |  ||  ||| ||||||||||||||||| |||    
T  7473 acaaaacttacactcaaattatccgcatggaagagataaacgagtcacatgttgcaatgtatgagtaag--tacgaatctacattcaatcaatgcatttt 7570  T
Q  147 aagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7571 aagttcattttcttaaatgtctttacaatttacttgtttcttttgagtaattca-tttacttttat 7635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 211
Target Start/End: Original strand, 200148 - 200330
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| ||||||||||||||||||||||  |  |||| |||||| |||||||||||||| |||||||||  || ||| ||| |||    
T  200148 ggtcacaattcaatcataca-aaaacttacactcaaattatccttatggaagcgagaaatgagtcacaagttgcaatgtatgaatctgtgtaccaactta 200246  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
     |||| |||||||||||||||||| ||||  ||||| |||||| |||||||||||||||||||||| |||||| |||||||||||    
T  200247 tattcgatcaatgcaatttaagttcatttctttaaacgtctttgcaatttacttgtttcttttgagtaattca-tttacttttat 200330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 3805 - 3682
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||| ||| ||| |||| ||    
T  3805 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcaaaagttgcaatgtatgaatatgtgtaccaatcta 3707  T
Q  128 cattcaatcaatgcaatttaagttt 152  Q
    ||||||||||||||| |||||||||    
T  3706 cattcaatcaatgcattttaagttt 3682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 3683 - 3647
Alignment:
Q  174 tttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||||||||||||||||||||||| |||||||||||    
T  3683 tttacttgtttcttttgagcaattca-tttacttttat 3647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 102109 - 101986
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||| ||| ||| |||| ||    
T  102109 ggtcacaattcaatcataca-aaaacttacactcaaattatccgcatggaagagagaaacgagtcaaaagttgcaatgtatgaatatgtgtaccaatcta 102011  T
Q  128 cattcaatcaatgcaatttaagttt 152  Q
    ||||||||||||||| |||||||||    
T  102010 cattcaatcaatgcattttaagttt 101986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 101987 - 101951
Alignment:
Q  174 tttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||||||||||||||||||||||| |||||||||||    
T  101987 tttacttgtttcttttgagcaattca-tttacttttat 101951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 202
Target Start/End: Original strand, 36355 - 36534
Alignment:
Q  32 acaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacatt 131  Q
    |||||||||| ||||| || |||| ||||| |||||| ||||  |||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||    
T  36355 acaatccaataatacaaaatactttcactctaattattcgcatggaagagagaaacgagtcacaagttgcaatgtatgaacatgtgtaccaacttacatt 36454  T
Q  132 caatcaatgcaatttaagtttattttcttaaa--gtc-------tttacaatttacttgtttcttttgagcaattcattt 202  Q
      |||||| ||||| ||||| |||| ||||||  |||       ||||||||||||||||||| ||||||||||||||||    
T  36455 tgatcaattcaattcaagttcatttacttaaaatgtctttgcaatttacaatttacttgtttcatttgagcaattcattt 36534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 67; Significance: 7e-30; HSPs: 5)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 129188 - 129358
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  |||| |||| |||||| |||||  |  |||| || |||||||||||||||||| |||||||||  || ||||||| |||    
T  129188 ggtcacaattcaatcatactaaaaatttacgctcaaactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgtaacaactta 129287  T
Q  128 cattcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    |||||| ||||||||||||||||| |||| ||| || |||||| |||||||||||||| ||||||| ||||    
T  129288 cattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttacttgtttattttgagtaatt 129358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 107444 - 107614
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||| | |||||  |  |||| || |||||||||||||||||| |||||||||  || ||| ||| |||    
T  107444 ggtcacaattcaatcatactaaaaacttacgctcagactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgtaccaactta 107543  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaatt 197  Q
    |||||  ||||||||||||||||| ||||  ||||| |||||| |||||| ||||||| ||||||| ||||    
T  107544 cattccgtcaatgcaatttaagttcatttctttaaatgtctttgcaatttgcttgtttattttgagtaatt 107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 129898 - 129971
Alignment:
Q  125 ttacattcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||| ||||||||||||||||| |||| ||| || |||||| |||||||||||||| ||||||| ||||    
T  129898 ttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttacttgtttattttgagtaatt 129971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 136016 - 136089
Alignment:
Q  125 ttacattcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||| ||||||||||||||||| |||| ||| || |||||| |||||||||||||| ||||||| ||||    
T  136016 ttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttacttgtttattttgagtaatt 136089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 144729 - 144802
Alignment:
Q  125 ttacattcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||||||| ||||||||||||||||| |||| ||| || |||||| |||||||||||||| ||||||| ||||    
T  144729 ttacattcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttacttgtttattttgagtaatt 144802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 27027 - 26873
Alignment:
Q  33 caatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattc 132  Q
    |||| ||| |||||| |||||||||| ||||| |||| |||   | ||||||||||||| ||||||  |  |||||||| ||| ||| |||||||| |||    
T  27027 caattcaaccatacaaaaaacttacaatcaaactatctgcattta-gagagaaacgagttacaagtcacactgtatgaatatgtgtaccaatttactttc 26929  T
Q  133 aatcaatgcaatttaagtttattttcttaaagtctttacaatttacttgtttcttt 188  Q
    |||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||    
T  26928 aatcaatgcaatttaagtttgttttcttaaattcttcgcaatttacttgtttcttt 26873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 33443 - 33268
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  ||||||||| |||||| |||||  |  |||| || |||||||||||||||||  ||||||||| ||| ||| ||| |||    
T  33443 ggtcacaattcaatcatactaaaaacttacgctcaaactatccatatggaagcgataaacgagtcacaagttggaatgtatgaatatgtgtaccaactta 33344  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattt 202  Q
    |||||| |||||||||||||| |  ||||  ||||| | |||| |||||||||||||| ||||||| |||||||||    
T  33343 cattcagtcaatgcaatttaaatacatttctttaaatgcctttgcaatttacttgtttattttgagtaattcattt 33268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 68212 - 68043
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||  ||||||||| |||||| |||||  |  |||| || |||||||||||||||||| |||||||||  || |||  || ||||    
T  68212 gtcacaattcaatcatactaaaaacttacgctcaaactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgtactaacttac 68113  T
Q  129 attcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||| ||||||||||||||||| |||| ||| || |||||| |||||| ||||||| ||||||| ||||    
T  68112 attcagtcaatgcaatttaagttcatttctctaaatgtctttgcaatttgcttgtttattttgagtaatt 68043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 197
Target Start/End: Complemental strand, 76317 - 76148
Alignment:
Q  29 gtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttac 128  Q
    |||||||| |||||||||  ||||||||| |||||| |||||  |  |||| || |||||||||||||||||| |||||||||  || |||  |  ||||    
T  76317 gtcacaattcaatcatactaaaaacttacgctcaaactatccttatggaagcgataaacgagtcacaagttgcaatgtatgaatctgtgtactatcttac 76218  T
Q  129 attcaatcaatgcaatttaagtttattt-tcttaaagtctttacaatttacttgtttcttttgagcaatt 197  Q
    ||||  ||||||||||||||||| |||| ||| || |||||| |||||| ||||||| ||||||| ||||    
T  76217 attctgtcaatgcaatttaagttcatttctctaaatgtctttgcaatttgcttgtttattttgagtaatt 76148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 116490 - 116608
Alignment:
Q  85 aacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtt 183  Q
    ||||||||||||||||| ||||||||| ||| ||| ||| ||||||||| |||||||||||| | |  ||||  ||||| |||||| |||||||||||||    
T  116490 aacgagtcacaagttgcaatgtatgaatatgtgtaccaacttacattcagtcaatgcaatttcaatacatttctttaaatgtctttgcaatttacttgtt 116589  T
Q  184 tcttttgagcaattcattt 202  Q
    | ||||||| |||||||||    
T  116590 tattttgagtaattcattt 116608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 6760 - 6674
Alignment:
Q  30 tcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    ||||||| |||||||||| ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||||||    
T  6760 tcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatg 6674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 62171 - 62255
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| ||| |||| |  |||| || |||||| ||||||||||| | |||||||    
T  62171 ggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacgaatcacaagttgcaaagtatgaa 62255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 71349 - 71433
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| ||| |||| |  |||| || |||||| ||||||||||| | |||||||    
T  71349 ggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacgaatcacaagttgcaaagtatgaa 71433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 17099 - 16915
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||| | ||||| ||| | || |  |||| || |||||||||||||||||| ||||||||||||| | | ||| ||    
T  17099 ggtcacaattcaatcatactaaaaacttgcgctcaatattgttcgtatggaagcgacaaacgagtcacaagttgcaatgtatgaacatgtgcaccaactt 17000  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||||||||||||||||| | |  ||||  ||||| |||||| |||||||||||||  |||| || |||||| |||||||||||    
T  16999 acattcaatcaatgcaatttcactacatttctttaaatgtctttgcaatttacttgttcattttaagtaattca-tttacttttat 16915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 5572 - 5617
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgca 73  Q
    ||||||||| |||||||| | |||||||||||||||| ||||||||    
T  5572 ggtcacaattcaatcatatagaaaacttacactcaaactatccgca 5617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 211
Target Start/End: Complemental strand, 45339 - 45155
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||| ||||| ||| |||| |  |||| |  |||||||||||||||||| ||||||||| ||| | | ||| ||    
T  45339 ggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagcggcaaacgagtcacaagttgcaatgtatgaatatgtgcaccaactt 45240  T
Q  127 acattcaatcaatgcaatttaagtttattttcttaaa-gtctttacaatttacttgtttcttttgagcaattcattttacttttat 211  Q
    |||||||||||||||||||| | |  ||||  ||||| |||||| |||||||||||||  |||| || |||||| |||||||||||    
T  45239 acattcaatcaatgcaatttcaatacatttctttaaatgtctttgcaatttacttgttcatttttagtaattca-tttacttttat 45155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 15132 - 14971
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| ||| || ||| |||||||||||| ||| ||||||||   | |||| |||||||| ||||||    |||||||||  || ||| | |||||    
T  15132 ggtcacaattcaaccagacaaaaaacttacactaaaactatccgcatcta-gagataaacgagttacaagtcaaaatgtatgaatttgtgtaccgattta 15034  T
Q  128 cattcaatcaatgcaatttaagtttattttcttaaagt-ctttacaatttacttgtttctttt 189  Q
    ||||||||||||||||||| ||||| |||||||||| | |||| ||||||| |||||||||||    
T  15033 cattcaatcaatgcaatttcagtttgttttcttaaattcctttgcaatttatttgtttctttt 14971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 25857 - 25734
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||| |   ||||||||| |||| ||||||  | |||||||||  || ||| |||||||    
T  25857 ggtcacaattcaatcatacagaaaacttacacttaaattatccgc-atttagagagaaatgagtaacaagtcacaatgtatgaatctgtgtaccaattta 25759  T
Q  128 cattcaatcaatgcaatttaagttt 152  Q
    | || ||| ||||||||||| ||||    
T  25758 cgtttaataaatgcaatttacgttt 25734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 32102 - 32221
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||||||||| ||| |||| |  |||| || |||||||||| ||||||| | ||||||||||| | | ||||||    
T  32102 ggtcacaattcaatcatactaaaaacttacactcaatattgtccgtatggaagcgacaaacgagtcaaaagttgcaaagtatgaacatgtgcaccaattt 32201  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| | ||||||||||||    
T  32202 tcattaagtcaatgcaattt 32221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 390108 - 390227
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| ||||||||| |||||||||||||||| | | |||| |  ||||||| |||||||||||||||||| | ||||||| ||| | | ||||||    
T  390108 ggtcacaattcaatcatactcaaaacttacactcaatactgtccgtatggaagagacaaacgagtcacaagttgcaaagtatgaatatgtgcaccaattt 390207  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| ||||  ||||||||    
T  390208 tcattaaatctttgcaattt 390227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 43726 - 43649
Alignment:
Q  78 agagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatcaatgcaatttaagtttatt 155  Q
    |||||||||||||| ||||||  | |||||||||  || ||| |||||||||||||||  ||||||||||||||||||    
T  43726 agagagaaacgagtaacaagtctcgatgtatgaatctgtgtaccaatttacattcaatttatgcaatttaagtttatt 43649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 151511 - 151418
Alignment:
Q  23 aaagtggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatg 115  Q
    |||| ||||||||| |||||||||  ||||||||||||||| | |||||| |  |||| || |||||||||||||||||| | |||||||||||    
T  151511 aaaggggtcacaattcaatcatactaaaaacttacactcaatactatccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatg 151418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 1427 - 1545
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattta 127  Q
    ||||||||| |||||||||  |||||||||||||||| |||| |||     ||||||||||||| ||||||    |||||||||  || ||| |||||||    
T  1427 ggtcacaattcaatcatacggaaaacttacactcaaactatctgcattcg-gagagaaacgagtaacaagtcagaatgtatgaatctgtgtaccaattta 1525  T
Q  128 cattcaatcaatgcaattta 147  Q
    |||||||||| |||||||||    
T  1526 cattcaatcattgcaattta 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 1325 - 1206
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  |||||||||||| || | | |||| |  |||| || |||||||||||||||||| | ||||||||||| | | ||||||    
T  1325 ggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaattt 1226  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| | ||||||||||||    
T  1225 tcattaagtcaatgcaattt 1206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 7753 - 7634
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  |||||||||||| || | | |||| |  |||| || |||||||||||||||||| | ||||||||||| | | ||||||    
T  7753 ggtcacaattcaatcatactaaaaacttacactaaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaattt 7654  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| | ||||||||||||    
T  7653 tcattaagtcaatgcaattt 7634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 11325 - 11444
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||| ||||| | | |||| |  |||| || ||| |||||||||||||| | |||||||| || ||| ||| ||    
T  11325 ggtcacaattcaatcatactaaaaacttacgctcaatactgtccgtatggaagcgacaaatgagtcacaagttgcaaagtatgaacctgtgtaccaaatt 11424  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||||||||||||||||||    
T  11425 tcattcaatcaatgcaattt 11444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 30616 - 30735
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | ||||||||||| | | ||||||    
T  30616 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaacatgtgcaccaattt 30715  T
Q  127 acattcaatcaatgcaattt 146  Q
     |||| | |||||| |||||    
T  30716 tcattaagtcaatgaaattt 30735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 31318 - 31202
Alignment:
Q  38 caatcatacacaaaacttacactcaaattatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaatttacattcaatca 137  Q
    |||||||||| |||||| ||||||||| ||||| ||   || ||||||||| || |||| |  | |||||||||  || ||| |||||||||||||||      
T  31318 caatcatacagaaaactaacactcaaactatccacattcaa-agagaaacgcgtaacaaatcacaatgtatgaatctgtgtaccaatttacattcaattt 31220  T
Q  138 atgcaatttaagtttatt 155  Q
    ||||||||||||||||||    
T  31219 atgcaatttaagtttatt 31202  T

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Target: scaffold0358 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 15741 - 15825
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||  ||||||||| |||||||||||||||| | |||||| |  |||| || |||||||||||||||||| | |||||||    
T  15741 ggtcacaaatcaatcatactcaaaacttacactcaatactatccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 15825  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 39885 - 39969
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||| ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  39885 ggtcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcgaagtatgaa 39969  T

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Target: scaffold0081 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 44366 - 44282
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||| ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  44366 ggtcacaattcaatcatacaaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 44282  T

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Target: scaffold0216 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 20076 - 19957
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaacatgcgtaacaattt 126  Q
    ||||||||| |||||||||  ||||||||| ||||| ||| |||| |  ||||  | ||| |||||||||||||| ||||||||| |   | | ||| ||    
T  20076 ggtcacaattcaatcatactaaaaacttacgctcaatattgtccgtatggaagctacaaatgagtcacaagttgcaatgtatgaatagatgcaccaactt 19977  T
Q  127 acattcaatcaatgcaattt 146  Q
    ||||||||||||||||||||    
T  19976 acattcaatcaatgcaattt 19957  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 728 - 683
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaaattatccgca 73  Q
    ||||||||| || ||||||| |||||||||||||||| ||||||||    
T  728 ggtcacaattcagtcatacaaaaaacttacactcaaactatccgca 683  T

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Target: scaffold0282 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 8864 - 8780
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  8864 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 8780  T

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Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 8184 - 8100
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  8184 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 8100  T

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Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 15314 - 15230
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  15314 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 15230  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 23053 - 23137
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  23053 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 23137  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 51011 - 50927
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  51011 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 50927  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 142322 - 142238
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| ||||||||  |||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  142322 ggtcacaattcaatcatattcaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 142238  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 58527 - 58611
Alignment:
Q  28 ggtcacaatccaatcatacacaaaacttacactcaa-attatccgcaaagaagagagaaacgagtcacaagttgctatgtatgaa 111  Q
    ||||||||| |||||||||  ||||||||||||||| | | |||| |  |||| || |||||||||||||||||| | |||||||    
T  58527 ggtcacaattcaatcatactaaaaacttacactcaatactgtccgtatggaagcgacaaacgagtcacaagttgcaaagtatgaa 58611  T

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