View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13863_high_6 (Length: 339)

Name: NF13863_high_6
Description: NF13863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13863_high_6
NF13863_high_6
[»] chr4 (10 HSPs)
chr4 (1-327)||(510652-510978)
chr4 (1-327)||(18086959-18087285)
chr4 (1-291)||(25422433-25422723)
chr4 (2-291)||(31316911-31317200)
chr4 (1-291)||(10322066-10322356)
chr4 (1-291)||(33688931-33689220)
chr4 (1-291)||(44209133-44209424)
chr4 (1-291)||(35060568-35060861)
chr4 (95-291)||(53571273-53571469)
chr4 (95-285)||(11670476-11670665)
[»] chr7 (12 HSPs)
chr7 (1-327)||(6934590-6934916)
chr7 (2-291)||(46043927-46044217)
chr7 (1-289)||(15131074-15131361)
chr7 (1-291)||(33625155-33625444)
chr7 (1-291)||(46331114-46331407)
chr7 (1-238)||(44167394-44167630)
chr7 (95-291)||(38199417-38199613)
chr7 (1-291)||(45958364-45958652)
chr7 (95-291)||(3496014-3496214)
chr7 (97-291)||(43083580-43083777)
chr7 (1-132)||(28094942-28095073)
chr7 (252-291)||(44167680-44167719)
[»] scaffold0651 (1 HSPs)
scaffold0651 (2-291)||(6498-6787)
[»] chr3 (11 HSPs)
chr3 (1-291)||(45234977-45235267)
chr3 (1-291)||(32943359-32943650)
chr3 (1-291)||(32147348-32147638)
chr3 (1-291)||(37179311-37179602)
chr3 (1-287)||(53439667-53439955)
chr3 (95-291)||(50614808-50615005)
chr3 (95-291)||(117174-117371)
chr3 (1-287)||(53397455-53397736)
chr3 (135-291)||(44557346-44557501)
chr3 (1-166)||(1429778-1429941)
chr3 (110-144)||(38634545-38634579)
[»] chr5 (7 HSPs)
chr5 (1-291)||(41139395-41139686)
chr5 (1-291)||(38693104-38693394)
chr5 (2-291)||(13920401-13920689)
chr5 (1-291)||(8217645-8217936)
chr5 (2-291)||(43440513-43440801)
chr5 (95-291)||(26865435-26865631)
chr5 (249-291)||(18950752-18950794)
[»] chr2 (10 HSPs)
chr2 (1-291)||(18672561-18672850)
chr2 (1-288)||(44493252-44493540)
chr2 (1-291)||(43932399-43932691)
chr2 (1-291)||(42487308-42487596)
chr2 (1-291)||(20720308-20720588)
chr2 (95-291)||(21439560-21439756)
chr2 (91-214)||(3105544-3105667)
chr2 (95-175)||(20719135-20719214)
chr2 (247-288)||(3104995-3105036)
chr2 (1-65)||(23787639-23787703)
[»] chr1 (11 HSPs)
chr1 (1-288)||(46596409-46596697)
chr1 (3-291)||(30982018-30982306)
chr1 (1-291)||(33708575-33708869)
chr1 (35-291)||(12000088-12000345)
chr1 (1-291)||(36362734-36363030)
chr1 (95-291)||(12367967-12368163)
chr1 (111-272)||(40182032-40182193)
chr1 (95-291)||(37986473-37986669)
chr1 (95-291)||(15054024-15054223)
chr1 (95-291)||(36248696-36248894)
chr1 (95-291)||(29231475-29231673)
[»] chr8 (13 HSPs)
chr8 (1-291)||(24451852-24452141)
chr8 (1-291)||(37706391-37706679)
chr8 (1-291)||(35369557-35369846)
chr8 (20-291)||(35863408-35863680)
chr8 (1-291)||(21135686-21135978)
chr8 (1-291)||(16473352-16473640)
chr8 (1-291)||(16477923-16478211)
chr8 (85-291)||(36063149-36063358)
chr8 (95-291)||(39337352-39337549)
chr8 (90-211)||(41280545-41280665)
chr8 (1-65)||(13323443-13323507)
chr8 (163-238)||(13323522-13323597)
chr8 (247-289)||(41281180-41281222)
[»] chr6 (3 HSPs)
chr6 (1-291)||(5079138-5079431)
chr6 (95-291)||(17245951-17246147)
chr6 (247-291)||(18502902-18502946)
[»] scaffold0003 (1 HSPs)
scaffold0003 (95-291)||(239741-239936)
[»] scaffold0097 (2 HSPs)
scaffold0097 (1-291)||(24146-24426)
scaffold0097 (95-175)||(22972-23052)
[»] scaffold0148 (2 HSPs)
scaffold0148 (89-291)||(35611-35812)
scaffold0148 (1-65)||(38474-38538)
[»] scaffold0385 (1 HSPs)
scaffold0385 (99-291)||(9692-9884)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-327)||(172329-172655)


Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 510652 - 510978
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  510652 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgccctttttttcttggcaggaactagttatg 510751  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  510752 atagactacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 510851  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 300  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  510852 attgccgggcatgagcggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 510951  T
Q  301 gtaaccgcaattggaatgatattaact 327  Q
    |||||||||||||||||||||||||||    
T  510952 gtaaccgcaattggaatgatattaact 510978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 18087285 - 18086959
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  18087285 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgccctttttttcttggcaggaactagttatg 18087186  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18087185 atagactacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 18087086  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 300  Q
    ||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18087085 attgccgggcatgagcggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 18086986  T
Q  301 gtaaccgcaattggaatgatattaact 327  Q
    |||||||||||||||||||||||||||    
T  18086985 gtaaccgcaattggaatgatattaact 18086959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 25422723 - 25422433
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  25422723 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgccctttttttcttggcaggaactagttatg 25422624  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | ||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| | ||||    
T  25422623 ataaattacgtcttctttatcctgacgaaatgggcggaatggctatcccaatatcaaaaatattcacgattttcactatcttatcgatgtctttttttgc 25422524  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| | |||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  25422523 attgtctggcatgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 25422433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 31317200 - 31316911
Alignment:
Q  2 gttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatga 101  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||       |||||||||||||||||||||    
T  31317200 gttctataagtgatattgggctcaacggggccgttttagaaataatatctcatggatttattggcgctgccctttttgtcttggcaggaactagttatga 31317101  T
Q  102 tagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgca 201  Q
    || |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  31317100 taaactatgtcttctttatcttgacgaaatgggcggaatggctatcccaataccaaaaatattcacgattttcactatcttatcgatcacttctcttgca 31317001  T
Q  202 ttgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||| |||||| ||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  31317000 ttgtcgggcacgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 31316911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 10322356 - 10322066
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||       ||||||| ||||||||||||    
T  10322356 ggttctataagtgatattgggctcaacggggccgttttacaaataatatctcatagatttattggcgctaccctttttttcttggcaagaactagttatg 10322257  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10322256 ataaattacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 10322157  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||| ||||| ||||||||||| ||||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||    
T  10322156 attgtcgggtatgagtggttttgttgctgaattgatagttttttttagaataattaatagtcaaaaatatctttacatgatgaaaatacta 10322066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 33688931 - 33689220
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||| ||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||| ||| |||       ||||||| ||||||||||||    
T  33688931 ggttttataagtgatattgggctcaacggagctgttttacaaataatatctcatggatttattggcgctaccctttttttcttggcaagaactagttatg 33689030  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  33689031 ataaactacgtcttctttatcttgacgaaatggacggaatgactatcccaatgtcaaaaatattcacgattttcactatcttatcgatgacttctcttgc 33689130  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||||||    
T  33689131 attgtcgggcatgagtggttttgttgccgaattgatag-tttttttggaataattactagtcaaaaatatcttttcatggtgaaaatacta 33689220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 44209133 - 44209424
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnn-cttggcaggaactagttat 99  Q
    |||||||||| ||||| |||||||||||| | | ||||||||||||||||||||||||||||||| ||| ||         ||| |||||||||||||||    
T  44209133 ggttctataaatgatattgggctcaacggagacgttttacaaataatatctcatggatttattggcgctaccattttttttctttgcaggaactagttat 44209232  T
Q  100 gatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttg 199  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  44209233 gataaactacgtcttctttatcttgacgaaatggacggaatggctattctaatgccaaaaatattcacgatttttactatcttatcgatgacttctcttg 44209332  T
Q  200 cattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||| |||||||||| || |||||||||||||| ||||         |||||||||| ||||||||||||||||||||||| |||||||||    
T  44209333 cattgtcgggcatgagtggctttgttgccgaatttatagtttttttttgaataattaccagtcaaaaatatcttttcatgattaaaatacta 44209424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 35060568 - 35060861
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataata-tctcatggatttattggggctgcccnnnnnnncttggcaggaactagttat 99  Q
    |||||||||||| ||| |||||||||| || || |||||||||||||| ||||||||||||||||  ||| |||       ||||||||||||||| |||    
T  35060568 ggttctataagtaatattgggctcaactggtccgttttacaaataataatctcatggatttattgacgctaccctttttttcttggcaggaactagatat 35060667  T
Q  100 gatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttg 199  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||    
T  35060668 gataaactacgtcttctttatcttgacgaaatgggcggaatggatatcccaatgccaaaaacatttacgattttcgctatcttatcgatgacttctcttg 35060767  T
Q  200 cattgccgggcatgagcggttttgttgccgaattgatag--nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||| |||||||| | ||||||||||||||| ||||||          |||||||||| ||||||||||||||||||||||||||||||||||    
T  35060768 cattgtcgggcatgggtggttttgttgccgaactgatagttttttttttggaataattattagtcaaaaatatcttttcatgatgaaaatacta 35060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 53571273 - 53571469
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  53571273 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcaccatcttatcaatgacttc 53571372  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  53571373 ttttgcattgtcgggcatgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 53571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 95 - 285
Target Start/End: Complemental strand, 11670665 - 11670476
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  11670665 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaata-tcacgattttcactatcttatcgatgacttc 11670567  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaa 285  Q
    | |||||||| | | |||||| ||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||    
T  11670566 ttttgcattgtcagacatgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatattttcatgatgaaa 11670476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 6934590 - 6934916
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  6934590 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgccctttttttcttggcaggaactagttatg 6934689  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6934690 atagactacatcttctttatcttgacgaaatgggcggaatggctatcccaatgctaaaaatattcacgattttcactatcttatcgatggcttctcttgc 6934789  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 300  Q
    |||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6934790 attgtcgggcatgagcggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 6934889  T
Q  301 gtaaccgcaattggaatgatattaact 327  Q
    |||||||||||||||||||||||||||    
T  6934890 gtaaccgcaattggaatgatattaact 6934916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 46043927 - 46044217
Alignment:
Q  2 gttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatga 101  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||       |||||||||||||||||||||    
T  46043927 gttctataagtgatattgggctcaacggggccgttttacaaataatatctcatgaatttattggcgctaccctttttttcttggcaggaactagttatga 46044026  T
Q  102 tagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgca 201  Q
    || |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46044027 taaactacgtcttctttatcttgacgaaaggggcggaatgactatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgca 46044126  T
Q  202 ttgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||| |||||||||| ||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||    
T  46044127 ttgtcgggcatgagtggttttgttgccgaattgatagtttttttttggaataattattagtcaaaaatatcttttcatgatgaaaatacta 46044217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 15131361 - 15131074
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| || |||||||| | || ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||    
T  15131361 ggttctataagtgatattgagctcaacgagaccgttttacaaataatatctcatggatttattggtgctaccctttttt-cttggcaggaactagttatg 15131263  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||    
T  15131262 ataaactacgtcttctttatcttgacaaaatgggcggaatggctatcccaatgccaaaattattcacgattttcactatcttatcgatgacttatgttgc 15131163  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatac 289  Q
    |||| |||||||||| |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||    
T  15131162 attgtcgggcatgagtggttttgttgccgaattgataattttttttggaataattactagtcaaaaatatcttttcatgatgaaaatac 15131074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 33625444 - 33625155
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||  ||| |||       |||||||| ||| |||||||    
T  33625444 ggttctataagtgatattgggctcaacgcggccgttttacaaataatatctcatggatttattgacgctaccctttttttcttggcagaaaccagttatg 33625345  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | |||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  33625344 ataaattacgtcttctttatcttgacgaaatgggcggaatggctatctcaatgcaaaaaatattcacgattttcactatcttatcgatgacttcttttgc 33625245  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||  |||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||    
T  33625244 attatcgggcatgagtggttttgttgccgaattgatag-tttttttggaataattactagtcaaaaatatctcttcatgatgaaaatacta 33625155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 46331407 - 46331114
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||| |||       || |||||||||||||||||    
T  46331407 ggttctataagtgatattgggctcaacgaggccgttttacaaataatatctcatggatttattggcgctaccctttttttctcggcaggaactagttatg 46331308  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | || ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||    
T  46331307 ataaaataagtcttctttatcttgacgaaatgggcggaatgactatcccaatgtcaaaaatattcatgattttcactatcttatcgatgacttctcttgc 46331208  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag----nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||  |||||||||| ||||| ||||||||||||||||            ||||||||||||||||||||||||| |||||||||||||||||||    
T  46331207 attttcgggcatgagtggtttggttgccgaattgatagttttttctttttggaataattactagtcaaaaatatc-tttcatgatgaaaatacta 46331114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 44167394 - 44167630
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||| || |||||||||||| |||  ||       ||||||||||||||||||||    
T  44167394 ggttctataagtgatattggactcaacggggccgttttacaaataatatttcgtggatttattggcgctagcctttttt-cttggcaggaactagttatg 44167492  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  44167493 ataaactacgtcttctttatcttaacgaaatgggtggaatggctatcccaatgccaaaaatattcacgattttcattatcttatcgatgacttctcttgc 44167592  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag 238  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  44167593 attgtcgggcatgagtggttttgttgccgaattgatag 44167630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 38199613 - 38199417
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38199613 gttatgatagactacgtcttctttatcttgacgaaatgaacggaatgactatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 38199514  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| | |||||||| |||||||||| |||||| ||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  38199513 ttttgcattgtcaggcatgagtggttttgttgacgaattaatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 38199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 45958364 - 45958652
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||||| | ||| |||       |||||||| |||||||||||    
T  45958364 ggttctataagtgatattgggctcaacgaggccgttttacaaataatatctcacggatttattagtgctaccctttttt-cttggcagaaactagttatg 45958462  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | |  ||||||||||||||||||||||| |||||||| |||||| |||| |||||||||| || ||||||||||||||||||||| ||||||||||    
T  45958463 ataaaat--gtcttctttatcttgacgaaatgggcggaatgactatcctaatgtcaaaaatattaacaattttcactatcttatcgatgacttctcttgc 45958560  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||   |||||||| | ||||||||||||||||||||         ||| ||||||||||||||||||||||||||||| |||||||||||    
T  45958561 attgtgaggcatgagtgattttgttgccgaattgatagtttttttttggagtaattactagtcaaaaatatcttttcatggtgaaaatacta 45958652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 3496214 - 3496014
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  3496214 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatgactatcccaatgccaaaaatattcatgattttcactattttatcgatgacttc 3496115  T
Q  195 tcttgc----attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatact 290  Q
    | ||||    |||| |||||||||| ||||||||||||||||||||||        ||||||||||||| |||||||||| ||||| |||||||||||||    
T  3496114 ttttgcattaattgtcgggcatgagtggttttgttgccgaattgatagttttttatggaataattactaatcaaaaatatattttcctgatgaaaatact 3496015  T
Q  291 a 291  Q
    |    
T  3496014 a 3496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 97 - 291
Target Start/End: Original strand, 43083580 - 43083777
Alignment:
Q  97 tatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctc 196  Q
    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||     
T  43083580 tatgatagactatgtcttctttatcttgacgaaatggatggaatggctatcccaatgtcaaaaatattcacgattttcactatcttatcgatgacttctt 43083679  T
Q  197 ttgcattgccgggcatgagcggttttgttgccgaattgatag---nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||||||| ||| |||||| | ||||||||||||||||||||           |||||||||||||||||||| | ||||||| ||||||||||||||    
T  43083680 ttgcattgtcggacatgagtgattttgttgccgaattgatagtttttttttttggaataattactagtcaaaagtttcttttcttgatgaaaatacta 43083777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 28095073 - 28094942
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||||    
T  28095073 ggttctataagtgatactgggctcaacgaggccattttacaaataatatctcatggatttattggggctgcactttttttcttggcaggaactagttatg 28094974  T
Q  101 atagactacgtcttctttatcttgacgaaatg 132  Q
    ||||||||||||||||||||||||||||||||    
T  28094973 atagactacgtcttctttatcttgacgaaatg 28094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 291
Target Start/End: Original strand, 44167680 - 44167719
Alignment:
Q  252 aattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  44167680 aattactagtcaaaaatatatttttatgatgaaaatacta 44167719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 6498 - 6787
Alignment:
Q  2 gttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatga 101  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||       |||||||||||||||||||||    
T  6498 gttctataagtgatattgggctcaacggggccgttttagaaataatatctcatggatttattggcgctgccctttttgtcttggcaggaactagttatga 6597  T
Q  102 tagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgca 201  Q
    || |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  6598 taaactatgtcttctttatcttgacgaaatgggcggaatggctatcccaataccaaaaatattcacgattttcactatcttatcgatcacttctcttgca 6697  T
Q  202 ttgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||| |||||| ||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  6698 ttgtcgggcacgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 6787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 45234977 - 45235267
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||| ||| |||       ||||||| ||||||||||||    
T  45234977 ggttctataagtgatattgggctcaacgaggccgttttacaaataatatctcatggacttattggcgctaccctttttttcttggcatgaactagttatg 45235076  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45235077 ataaactacgtcttctttatcttgacgaaatggagggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 45235176  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||| ||||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||||||||||||    
T  45235177 attgtcgggcatgagtggttttgttgccgaattgatagttttttttggaataattgctagtcaaaaatatcttttcatgatgaaaatacta 45235267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 32943650 - 32943359
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |  || |||       ||| ||||||||||||||||    
T  32943650 ggttctataagtgatattgggctcaacggtgccattttacaaataatatctcatggatttatttgcactaccctttttttcttcgcaggaactagttatg 32943551  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||| |||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32943550 ataaactacgtcttctttatcttgaagaaataggcggaatggttatcctaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 32943451  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||    
T  32943450 attgtcgggcatgagtggttttgttgccgaattgatagtttttttttggaataattactagtcaaaaatatattttcatgatgaaaatacta 32943359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 32147638 - 32147348
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||       ||| ||| | ||||||||||    
T  32147638 ggttctataagtgatattgggctcaacggggccatttgacaaataatatctcatggatttattgatgctaccctttttttcttcgcaagtactagttatg 32147539  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||| |||| ||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32147538 ataaactacgtcttctttatcctgacaaaatgggcggaatggct--cccaatgtcaaaaatattcacgattttcactatcttatcgatgacttctcttgc 32147441  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag----nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |  ||||||| ||||||||||||||||||||||            |||||||||||||||||||||||| ||||||||||||||||||||    
T  32147440 attgtc--gcatgagtggttttgttgccgaattgatagttttttttttttggaataattactagtcaaaaatatattttcatgatgaaaatacta 32147348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 37179602 - 37179311
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||| |||||| |||  ||||||||||||||||||||||||||||||| ||| | |       ||||||||||||||||||||    
T  37179602 ggttctataagtgatattgggttcaacgaggctgttttacaaataatatctcatggatttattggcgctacactttttttcttggcaggaactagttatg 37179503  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| | || || |||||||||||  ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37179502 ataaattaagttttctttatcttaccgaaatgggcggaatg-ctatcacaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 37179404  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag--nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||  ||||||||||||||||||||||           ||||||||| ||||||||||||||||||||||||||||||||||    
T  37179403 attgtcgggcatgattggttttgttgccgaattgatagtttctttttttgaataattattagtcaaaaatatcttttcatgatgaaaatacta 37179311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 53439955 - 53439667
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnn--cttggcaggaactagtta 98  Q
    |||||||||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||         ||||| ||||||||||||    
T  53439955 ggttctataaatgatattgggctcagcggggccgttttacaaataatatctcatggatttattggagctaccccttttttttcttggtaggaactagtta 53439856  T
Q  99 tgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctctt 198  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| ||||||| |||||||| |||| ||||||||    
T  53439855 tgataaactacgtcttctttatcttgacgaaatgggcgcaatggctatcccaatgtcaaaaatattcacaattttcattatcttattgatgacttctctt 53439756  T
Q  199 gcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaat 287  Q
    ||||||  || |||||| ||||||||||||||||||||||        ||| || ||| |||| |||||||||||||||||||||||||    
T  53439755 gcattgttggacatgagtggttttgttgccgaattgatagttttttttggagtagttattagttaaaaatatcttttcatgatgaaaat 53439667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 50614808 - 50615005
Alignment:
Q  95 gttatgatagactac-gtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggctt 193  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  50614808 gttatgatagactaccgtcttctttatcttgacgaaatgggtggaatgactatcccaatgccaaaaatattcacgattttcactatcttatcaatgactt 50614907  T
Q  194 ctcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    || |||||||| |||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||| ||||| ||||||||||||||    
T  50614908 cttttgcattgtcgggcatgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatattttcttgatgaaaatacta 50615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 117174 - 117371
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||    
T  117174 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatggatatctcaatgccaaaaatattcacgattttcactatcttatcgatgacatc 117273  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| | |||||||| |||||||||  |||||||||||         |||||||||||||||||||||||| ||||||||||||||||||||    
T  117274 ttttgcattgtcaggcatgagaggttttgttatcgaattgatagtttttttttggaataattactagtcaaaaatatattttcatgatgaaaatacta 117371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 53397736 - 53397455
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnn-cttggcaggaactagttat 99  Q
    |||| ||||| ||||| |||||||||||||||| ||||||||||||||||||      |||||||  || |||        ||||| |||||||| ||||    
T  53397736 ggttttataaatgatattgggctcaacggggccgttttacaaataatatctc------ttattggcactacccttttttttcttggtaggaactaattat 53397643  T
Q  100 gatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttg 199  Q
    |||| |||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||| ||||||| |||||||| ||||  ||||||||    
T  53397642 gataaactacgtcttctttatcttgacgaaatgggcgcaatgactattccaatgccaaaaatattcacaattttcattatcttattgatgatttctcttg 53397543  T
Q  200 cattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaat 287  Q
    ||||| |||||||||| | ||||||||||||||||||||        ||| || ||||||||||||||||| ||||||||||||||||    
T  53397542 cattgtcgggcatgagtgattttgttgccgaattgatagttttttttggagtagttactagtcaaaaatattttttcatgatgaaaat 53397455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 135 - 291
Target Start/End: Original strand, 44557346 - 44557501
Alignment:
Q  135 cggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcattgccgggcatgagcggttttgttgccgaattg 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||  |||||||||||||||||    
T  44557346 cggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttcttttgcattgtcgggcatgagtagttttgttgccgaattg 44557445  T
Q  235 atagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  44557446 atag-tttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 44557501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 1429941 - 1429778
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||    
T  1429941 ggttctataagtgatattgggctcaacgggactgttttacaaataatatctcatggatttattggcgctaccctttttttcttggcaggaactagttatg 1429842  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattca 166  Q
    ||| ||||||| ||||||||||||||||||||   ||||| |   |||||||||||||||||||||    
T  1429841 ataaactacgttttctttatcttgacgaaatggatggaatag--gtcccaatgccaaaaatattca 1429778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 38634579 - 38634545
Alignment:
Q  110 gtcttctttatcttgacgaaatgagcggaatggct 144  Q
    ||||||||||||||||||||||| |||||||||||    
T  38634579 gtcttctttatcttgacgaaatgggcggaatggct 38634545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 1e-96; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 41139686 - 41139395
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||        ||||||||||||||||||||    
T  41139686 ggttctataagtgatattgggctcaacagggccgttttacaaataatatctcatggatttattggcgctaccatttttttcttggcaggaactagttatg 41139587  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41139586 ataaactatgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 41139487  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||| ||||| |||||||||||| |||||||||         |||||||||||||||| ||||||||||||||||||||||||||||    
T  41139486 attgtcgggtatgagtggttttgttgccaaattgatagtttttttttggaataattactagtcgaaaatatcttttcatgatgaaaatacta 41139395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 38693104 - 38693394
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||    
T  38693104 ggttctataagtgatattgggctcaacggggctgttttacaaataatatctcatggatttattggcgctaccctttttttcttggcaggaactagttatg 38693203  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||| ||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  38693204 ataaactatgtcttttttatcttgacgaaatgggcggaatggctatcctaatgccaaaaatattcacgattttcactatattatcgatgacttctcttgc 38693303  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| || ||||||| ||||||||||| ||||||||||        ||||||||| |||||||||||||||||||||||||||||||||||    
T  38693304 attgtcgagcatgagtggttttgttgctgaattgatagttttttttggaataatttctagtcaaaaatatcttttcatgatgaaaatacta 38693394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 13920689 - 13920401
Alignment:
Q  2 gttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatga 101  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||       ||||| |||||||||||||||    
T  13920689 gttctataagtaatattgggctcaacggggccgttttacaaataatatcttatggatttattggtgctgccctttttttcttgggaggaactagttatga 13920590  T
Q  102 tagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgca 201  Q
    || ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  13920589 taaactacgttttctttatcttgacgaaatgggcggaatggctatcccaatgtcaaaaatattcacgattttcactatcttatcgatgacttctcttgca 13920490  T
Q  202 ttgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||| |||| ||||| |||||||||||| |||||||||        | ||||||||||||||||||||||||||| |||||||||||||||    
T  13920489 ttgtcgggtatgagtggttttgttgcctaattgatag-tttttttgaaataattactagtcaaaaatatctttttatgatgaaaatacta 13920401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 8217645 - 8217936
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||| ||||| | |||||||| ||||| |||||||||||||||||||||||||||||||  | ||||       ||||||||||||||||||||    
T  8217645 ggttctataaatgatattcggctcaacagggccgttttacaaataatatctcatggatttattggcaccgccctttttttcttggcaggaactagttatg 8217744  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8217745 atagactacgttttctttatcttgacgaaatgggtggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 8217844  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||  ||||||||  | ||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||||||||    
T  8217845 attgttgggcatgaatgattttgttgccgaattgatagtttttttttggaatatttactagtcaaaaatatcttttcatgatgaaaatacta 8217936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 43440513 - 43440801
Alignment:
Q  2 gttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatga 101  Q
    ||||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||| |||||||       |||||||  ||||||||||||    
T  43440513 gttctataagtgatattgagctcaacgggaccgttttacaaataatatctcatggatttattggcgctgccctttttt-cttggcaaaaactagttatga 43440611  T
Q  102 tagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgca 201  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||  || |||||||    
T  43440612 taaactacgtcttctttatcttgacgaaatggacggaatggctatcccaatgctaaaaatattcacgatttttactatcttattgatgatttatcttgca 43440711  T
Q  202 ttgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||| | |||||||| |  |||||||||||||||||||        ||||||||||||||||||||||||||||| || ||||||||||||    
T  43440712 ttgtccggcatgagtgactttgttgccgaattgatagtttttattggaataattactagtcaaaaatatctttttatcatgaaaatacta 43440801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 26865435 - 26865631
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26865435 gttatgatagactacgccttctttatcttgaggaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 26865534  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||||||||| |||||||||||| |||||||||        ||||||||||||||| |||||||||||||||||||||||||||||    
T  26865535 ttttgcattgtcgggcatgagtggttttgttgcccaattgatagttttttttggaataattactagtaaaaaatatcttttcatgatgaaaatacta 26865631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 18950752 - 18950794
Alignment:
Q  249 aataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  18950752 aataaataccagtcaaaaatatcttttcatgatgaaaatacta 18950794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 18672850 - 18672561
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||  ||| |||       ||||||| ||||||||||||    
T  18672850 ggttctataagtgatattgggctcaacggggccgttttacaaataacatctcatggatttattgacgctaccctttttt-cttggcaagaactagttatg 18672752  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18672751 ataaactacgtcttatttatcttgacgaaatgggcgaaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 18672652  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| ||| |||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||    
T  18672651 attgtcggacatgagtggttttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgataaaaatacta 18672561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 44493540 - 44493252
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||  || |||       ||||||||||||||||||||    
T  44493540 ggttctataagtgatattggcctcaacggagccgttttacaaataatatctcatggatttattggcactaccctttttttcttggcaggaactagttatg 44493441  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44493440 ataaactacgtcttctttatcttgatgaaatgggcggaatgacaatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 44493341  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaata 288  Q
    |||| |||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||| |||||||||||||||||    
T  44493340 attgtcgggcatgagtggttttgttgccgaattgatagtttttttttggaataattactagtcaaaaatatattttcatgatgaaaata 44493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 43932399 - 43932691
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||| |||       ||||||| || |||||||||    
T  43932399 ggttctataagtgatattgggctcaacggggccgttttacaaataatatctcatgaatttattggtgctaccctttttttcttggcaagacctagttatg 43932498  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||    
T  43932499 ataaactacgtcttctttatcttaacgaaatgggcggaatggctatcccaatgtaaaaaatattcatgattttcactatcttatcgatgacttctcttgc 43932598  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag--nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||| ||||| |||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  43932599 attgtcgggtatgagtggttttgttgcctaattgatagttttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 43932691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 42487308 - 42487596
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||    
T  42487308 ggttctataagtgatattgagctcaacggggccgttttacaaataatatctcatggatttattggcgctaccctttttttcttggcaggaactagttatg 42487407  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||||||||||  ||||||||  ||||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||    
T  42487408 ataaactacgtcttctttatcttgacgaaatggacggaatggacatcccaatg-caaaaatattcacgattttcaccatcttatcaatgacttctcttgc 42487506  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| || ||||||| || |||||||| ||||||||||         |||| |||||||||||||||||||||||||||||||||||||||    
T  42487507 attgtcgagcatgagtggctttgttgctgaattgatagtttttatttgaat-attactagtcaaaaatatcttttcatgatgaaaatacta 42487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 20720588 - 20720308
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||||| ||| |||       ||||| |||||||| |||||    
T  20720588 ggttctataagtgataatgggctcaacgaggccgttttacaaataatatctcatagatttattggtgctaccctttttttcttgggaggaactaattatg 20720489  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||          || | |||||||||||||||| ||||||||||    
T  20720488 ataaactacatcttctttatcttgacgaaatgggcggaatgactatcccaatgccaaa----------atatccactatcttatcgatgacttctcttgc 20720399  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| ||| |||||| | ||||||||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||||||    
T  20720398 attgtcggacatgagtgattttgttgccgaattgatagtcttttttggagtaattactagtcaaaaatatcttttcatgatgaaaatacta 20720308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 21439560 - 21439756
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  21439560 gttatgatagactacgtcttctttatcttgacgaaataggcggaatgactatctcaatgccaataatattcacgattttcattatcttatcgatgacttc 21439659  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||||||||| | ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  21439660 ttttgcattgtcgggcatgagtgattttgttgccgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 21439756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 3105667 - 3105544
Alignment:
Q  91 actagttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgg 190  Q
    ||||||||||||| |||||| ||||||||| |||| |||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  3105667 actagttatgataaactacgccttctttattttgaagaaatgggcggaatgactatcccaatgccaaaaatattcaagattttcactatcttatcgatga 3105568  T
Q  191 cttctcttgcattgccgggcatga 214  Q
    |||||||||||||| |||||||||    
T  3105567 cttctcttgcattgtcgggcatga 3105544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 20719135 - 20719214
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttca 175  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  20719135 gttatgatagactacgtctt-tttatcttgacgaaatgggcggaatggctatcccaatgccaaaaataatcacgattttca 20719214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 247 - 288
Target Start/End: Complemental strand, 3105036 - 3104995
Alignment:
Q  247 ggaataattactagtcaaaaatatcttttcatgatgaaaata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3105036 ggaataattactagtcaaaaatatcttttcatgatgaaaata 3104995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23787703 - 23787639
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattgg 65  Q
    |||||||  ||||||| |||||||||| | ||| ||||||||||||||| |||||||||||||||    
T  23787703 ggttctagtagtgatattgggctcaacagagccgttttacaaataatatttcatggatttattgg 23787639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 46596409 - 46596697
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||| ||||||||| | ||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||       ||||||||||||||||||||    
T  46596409 ggttttataagtgaaattgggctcaacgaggccgttttacaaataatatatcatggatttattggtgctgccctttttttcttggcaggaactagttatg 46596508  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46596509 ataaactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 46596608  T
Q  201 attgccgggcatgagcggttttgttgccgaattgata-gnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaata 288  Q
    |||| | |||||||| ||||| |||||| ||||||||          ||||||||||||| ||||||||||||||||||||||||||||    
T  46596609 attgtccggcatgagtggtttggttgcctaattgatattttttttttggaataattactaatcaaaaatatcttttcatgatgaaaata 46596697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 3 - 291
Target Start/End: Original strand, 30982018 - 30982306
Alignment:
Q  3 ttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatgat 102  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||||    
T  30982018 ttctaaaagtgatattgggctcaacgagaccgttttacaaataatatctcatggatttattggtgctaccctttttttcttggcaggaactagttatgat 30982117  T
Q  103 agactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcat 202  Q
    | |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  30982118 aaactacgtcttctttatcttgacgaaatgggcggagtggttatcccaatgccaaaaaaattcacaattttcactatcttatcgatgacttctcttgcat 30982217  T
Q  203 tgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    || ||||| || | ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  30982218 tg-cgggcgtgggtggttttgttgccgaattgatagtttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 30982306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 33708575 - 33708869
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||   || |||       ||||||| ||| ||||||||    
T  33708575 ggttctataagtgatattgggctcaacggggccattttataaataatatctcatggatttattgacactaccctttttttcttggcatgaattagttatg 33708674  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||||||||||||  ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  33708675 ataaactacgtcttctttatcttgacgaaatggacggaatgactatcctaatgctaaaaatattcacgattttcactatcttatcgatgagttctcttgc 33708774  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatag----nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| ||| |||||| |||||||||||||||||| |||            | |||||||||||||||||||||| ||||||||||||||||||||    
T  33708775 attgtcggacatgagtggttttgttgccgaattggtagttttttttttttgaaataattactagtcaaaaatatattttcatgatgaaaatacta 33708869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 35 - 291
Target Start/End: Complemental strand, 12000345 - 12000088
Alignment:
Q  35 ttttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatgatagactacgtcttctttatcttgacgaaatgag 134  Q
    |||||||||||||||||||||||||||||||  |||| |       |||||||  ||||||||||||||||||| ||||||||||||||||||||||| |    
T  12000345 ttttacaaataatatctcatggatttattggcactgctctttctttcttggcaaaaactagttatgatagactatgtcttctttatcttgacgaaatggg 12000246  T
Q  135 cggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcattgccgggcatgagcggttttgttgccgaattg 234  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||| |||| ||||| |||||||||||| ||||     
T  12000245 cggaatggctatcccaatgcaaaaaatattctcgattttcactatcttatcaatgacttctcttgcattgtcgggtatgagtggttttgttgccaaattc 12000146  T
Q  235 atag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||         ||||||||||||||| |||||||||||||||||||||||||||||    
T  12000145 atagtttttttttggaataattactagtaaaaaatatcttttcatgatgaaaatacta 12000088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 36362734 - 36363030
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnn---cttggcaggaactagtt 97  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||  ||          ||||| |||||||||||    
T  36362734 ggttctataagtgatattgggctcaacggggccgttttacaaataatatctcatggatttattggcactatccttttttttttcttggtaggaactagtt 36362833  T
Q  98 atgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctct 197  Q
    |||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  36362834 atgataaactacgtcttctttatcttgacgaaatgggcgcattggctatcccaatgccaaaaatattcacaattttcattatcttatcgatgacttctct 36362933  T
Q  198 tgcattgccgggcatgagcggttttgttgccgaattgatag---nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||||| |  ||||||| |||||||||| |||||||||||           ||| || ||||||||||||||||||||||| ||||||||||||||    
T  36362934 tgcattgtcaagcatgagtggttttgttgtcgaattgatagtttttttttttggagtagttactagtcaaaaatatcttttcgtgatgaaaatacta 36363030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 12367967 - 12368163
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12367967 gttatgacagactacatcttctttattttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 12368066  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| | |||||||| ||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||    
T  12368067 ttttgcattgtctggcatgagtggttttgttgccgaattgatagttttttttggaataattattagtcaaaaatatcttttcatgatgaaaatacta 12368163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 111 - 272
Target Start/End: Complemental strand, 40182193 - 40182032
Alignment:
Q  111 tcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcattgccgggc 210  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40182193 tcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcattgccgggc 40182094  T
Q  211 atgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatct 272  Q
    |||||||||||||||||| |||||||||        ||||||||||||||||||||||||||    
T  40182093 atgagcggttttgttgccaaattgatagttttttttggaataattactagtcaaaaatatct 40182032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 37986473 - 37986669
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  37986473 gttatgatagactacgtcttctttatcttgacgaaatgggtggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttt 37986572  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | || ||||| | |||||||| ||||||||||  ||||||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  37986573 ttttccattgtcaggcatgagtggttttgttgttgaattgatagttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 37986669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 15054223 - 15054024
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||  |||    
T  15054223 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatgactatcccaatgccaaaaatattcacgattttcactatcatattgatgatttc 15054124  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatag---nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||| ||||| ||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  15054123 ttttgcattgtcgggtatgagtggttttgttgccgaattgatagttttttttgttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 15054024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 36248894 - 36248696
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36248894 gttatgatagactacgtcttctttatcttgacgaaatggacggaatagctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 36248795  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattga-tag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||  ||||| ||||||||||||||||||| |||         |||||||||||||||||||||||| | ||||||||||||||||||    
T  36248794 ttttgcattgtcggatatgagtggttttgttgccgaattgattagtttttttttggaataattactagtcaaaaatatatgttcatgatgaaaatacta 36248696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 29231673 - 29231475
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  29231673 gttatgatagactacgttttctttatcttgacgaaataggtggaatgactatcccaatgcaaaaaatattcactattttcactatcttatcgatgacttc 29231574  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatag--nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| ||| |||||| | |||| |||||||||||||||          ||||||||||||||| |||||||||||||||||||||||||||||    
T  29231573 ttttgcattgtcggacatgagtgattttcttgccgaattgatagttttttttttggaataattactagtaaaaaatatcttttcatgatgaaaatacta 29231475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 24452141 - 24451852
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||       ||| | ||||||||||||||    
T  24452141 ggttctgtaagtgatattgggctcaacgggaccgttttacaaataatatctcatggatttattggcgctaccctttttt-cttagtaggaactagttatg 24452043  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24452042 ataaactacgtcttctttatcttgacgaaatgggtggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttctcttgc 24451943  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||  ||||||||||| ||||||||||        |||||||||||| |||||||||||||||||||| |||||||||||    
T  24451942 attgtcgggcatgaatggttttgttgctgaattgatagttttttttggaataattactggtcaaaaatatcttttcatgctgaaaatacta 24451852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 37706391 - 37706679
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||| ||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| ||| |||       |||||||||||||||||| |    
T  37706391 ggttctgtaagtgatattgggctcaacgaggccgttttacaaataatatatcatggatttattggcgctaccctttttt-cttggcaggaactagttacg 37706489  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37706490 ataaactacgtcttctttatcttgacgacatgggcggaatggctatcccaatgtcaaaaatattcacgattttcactatcttatcgatgacttctcttgc 37706589  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||| ||||| |||||||||||| |||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  37706590 attgtcgggtatgagtggttttgttgcctaattgatagtttttttt-gaataattactagtcaaaaatatcttttcatgatgaaaatacta 37706679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 35369846 - 35369557
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactag--tta 98  Q
    |||| ||||||||||| ||||||||||| |||| ||||||||||||||| |||| ||||||||||  ||||||       |||||||||||||||  |||    
T  35369846 ggttatataagtgatattgggctcaacgaggccgttttacaaataatatatcatagatttattggcactgccctttttt-cttggcaggaactagagtta 35369748  T
Q  99 tgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctctt 198  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  35369747 tgatagactacttcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttattgaagacttctctt 35369648  T
Q  199 gcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||| || ||||||| ||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||    
T  35369647 ggattgtcgcgcatgagtggttttgttgccgaattgatag--ttttttggaataattactagacaaaaatatcttttcatgatgaaaatacta 35369557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 20 - 291
Target Start/End: Complemental strand, 35863680 - 35863408
Alignment:
Q  20 ggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatgatagactacgtcttcttta 119  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| ||| |||       ||||||||||||||||||||||| ||||||  |||||||    
T  35863680 ggctcaacgggaccgttttacaaataatatctcatggatttattggcgctaccctttttttcttggcaggaactagttatgataaactacgcattcttta 35863581  T
Q  120 tcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgcattgccgggcatgagcggt 219  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| | |    
T  35863580 tcttgacgaaataggcggaatggctatcccgatgccaaaaatattcacaattttcactatcttatcgatgacttctcttgcattgtcgggcatgagtgat 35863481  T
Q  220 tttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||||| || | |||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  35863480 tttgttaccaacttgatagtttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 35863408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 21135978 - 21135686
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| |||||||||||||||| |||||||||||| || |||| ||||||||||  || |||       ||| ||| ||| ||||||||    
T  21135978 ggttctataagtgatattgggctcaacggggccgttttacaaataacatttcatagatttattggctctaccctttttttctttgcaagaattagttatg 21135879  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatc-ttatcgatggcttctcttg 199  Q
    ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  21135878 ataaactacgtcttctttatcttgacgaaatgggcgaaatggctatcccaatgccaaaaatattcacgattttcactatctttatcaatgacttctcttg 21135779  T
Q  200 cattgccgggcatgagcggttttgttgccgaattgatag-nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
     |||| |||||||||| | ||||||| ||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  21135778 aattgtcgggcatgagtgattttgtttccgaattgatagttttttttttaaataattactagtcaaaaatatcttttcatgatgaaaatacta 21135686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 16473640 - 16473352
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||| |||  ||       ||| |||||||||||||||     
T  16473640 ggttctataagtgatattggactcaacggggccgttttacaaataatatctcatggatt-attggtgctatcctttttttcttagcaggaactagttata 16473542  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||| || ||||| || |||| |  |||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  16473541 ataaactacgtcttctttatcttaacaaaatgggcagaattgtcatcccaatgctaaaaatattcacgattttcactatcttatcgatgacgtctcttgc 16473442  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||  | ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||||    
T  16473441 attgtcgggcatgattgattttgttgccgaattgatagttttttta-gaataattactagtcaaaaatatcttttcatgatgaaagtacta 16473352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 16478211 - 16477923
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||| |||  ||       ||| |||||||||||||||     
T  16478211 ggttctataagtgatattggactcaacggggccgttttacaaataatatctcatggatt-attggtgctatcctttttttcttagcaggaactagttata 16478113  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||||||||||||||||| || ||||| || |||| |  |||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  16478112 ataaactacgtcttctttatcttaacaaaatgggcagaattgtcatcccaatgctaaaaatattcacgattttcactatcttatcgatgacgtctcttgc 16478013  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| |||||||||  | ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||| |||||    
T  16478012 attgtcgggcatgattgattttgttgccgaattgatagttttttta-gaataattactagtcaaaaatatcttttcatgatgaaagtacta 16477923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 85 - 291
Target Start/End: Original strand, 36063149 - 36063358
Alignment:
Q  85 gcaggaactagttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgcc-aaaaatattcacgattttcactatctta 183  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  36063149 gcaggaactagttatgataaactacgtcttctttatcttgacgaaatgggcggaatgactatcccaatgccaaaaaatgttcacgattttcaccatctta 36063248  T
Q  184 tcgatggcttctcttgcattgccgggcatgagcggttttgttgccgaattgatag--nnnnnnnnggaataattactagtcaaaaatatcttttcatgat 281  Q
    |||||| |||||||||||||| || ||||||| || |||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  36063249 tcgatgacttctcttgcattgtcgagcatgagtggctttgttgccgaattgatagttttttttttggaataattactagtcaaaaatatcttttcatgat 36063348  T
Q  282 gaaaatacta 291  Q
    ||||||||||    
T  36063349 gaaaatacta 36063358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 39337549 - 39337352
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  39337549 gttatgatagactacgttttctttatcttgacgaaatgggcggaatgactatcccaatgccaaaaatattcacgattttcactatcttatcgatgactta 39337450  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgata-gnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | ||| |||| |||||||||| | ||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||    
T  39337449 ttttgaattgtcgggcatgagtgattttgttgccgaattgataggttttttttggaataattactagtcaaaaatatcttttcatgatgaaaatacta 39337352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 41280545 - 41280665
Alignment:
Q  90 aactagttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatg 189  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||  |||  || | ||||||||||||| ||||||||||||||||||||||    
T  41280545 aactagttatgataaattacgtcttctttatcttgacgaaatgggcggaatgattattaca-taccaaaaatattcaagattttcactatcttatcgatg 41280643  T
Q  190 gcttctcttgcattgccgggca 211  Q
     |||||||||||||| ||||||    
T  41280644 acttctcttgcattgtcgggca 41280665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13323443 - 13323507
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattgg 65  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||    
T  13323443 ggttctataagtgatattgggctcaacggggccgttgtacaaataatatctcatggattgattgg 13323507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 13323522 - 13323597
Alignment:
Q  163 ttcacgattttcactatcttatcgatggcttctcttgcattgccgggcatgagcggttttgttgccgaattgatag 238  Q
    |||| |||||||||||||||||||||| ||||| |||| ||| ||||||||||  |||||||||||||||||||||    
T  13323522 ttcatgattttcactatcttatcgatgacttcttttgctttgtcgggcatgagttgttttgttgccgaattgatag 13323597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 41281180 - 41281222
Alignment:
Q  247 ggaataattactagtcaaaaatatcttttcatgatgaaaatac 289  Q
    |||||||||||||||||||||||| ||||| |||| |||||||    
T  41281180 ggaataattactagtcaaaaatatattttcctgataaaaatac 41281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 3e-85; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 5079138 - 5079431
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnn-cttggcaggaactagttat 99  Q
    |||||||||||||| ||||| ||||||| |||| |||||||||||||||||||  ||||||||||  ||||||        |||||||||||||||||||    
T  5079138 ggttctataagtgacactgg-ctcaacgaggccgttttacaaataatatctcacagatttattggcactgcccttttttttcttggcaggaactagttat 5079236  T
Q  100 gatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttg 199  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  5079237 gatagactacgtcttctttatcttgacgaaatgggcggaaaggctatcccaattccaaaaatattcacgattttcactatcttatcgatgacttctcttg 5079336  T
Q  200 cattgccgggcatgagcggttttgttgccgaattgatag---nnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    ||||| ||| |||||| ||||||||||||||||||||||           ||||||||||||||||||||||||||||| |||||||||||||||    
T  5079337 cattgtcggacatgagtggttttgttgccgaattgatagtttttttttttggaataattactagtcaaaaatatctttttatgatgaaaatacta 5079431  T

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Target: chr6; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 95 - 291
Target Start/End: Complemental strand, 17246147 - 17245951
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17246147 gttatgatagactacgtcttctttatcttgacgaaatgggaggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 17246048  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||||||||| ||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||    
T  17246047 ttttgcattgtcgggcatgagtggttttgttgccgaattgatagttttttttggaataattaatagtcaaaaatatcttttcatgatgaaaatacta 17245951  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 18502902 - 18502946
Alignment:
Q  247 ggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  18502902 ggaataattattagtcaaaaatatcttttcatgatgaaaatacta 18502946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 95 - 291
Target Start/End: Original strand, 239741 - 239936
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttc 194  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  239741 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatgacttc 239840  T
Q  195 tcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    | |||||||| |||||||||| ||||||||||||||||||||||        | |||||||||||||||||||||| ||||||||||||||||||||    
T  239841 ttttgcattgtcgggcatgagtggttttgttgccgaattgatag-tttttttgaaataattactagtcaaaaatattttttcatgatgaaaatacta 239936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 24426 - 24146
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||||| ||| |||       ||||| |||||||| |||||    
T  24426 ggttctataagtgataatgggctcaacgaggccgttttacaaataatatctcatagatttattggtgctaccctttttttcttgggaggaactaattatg 24327  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||          || | |||||||||||||||| ||||||||||    
T  24326 ataaactacatcttctttatcttgacgaaatgggcggaatgactatcccaatgccaaa----------atatccactatcttatcgatgacttctcttgc 24237  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||| ||| |||||| | ||||||||||||||||||||        ||| |||||||||||||||||||||||||||||||||||||||||    
T  24236 attgtcggacatgagtgattttgttgccgaattgatagtcttttttggagtaattactagtcaaaaatatcttttcatgatgaaaatacta 24146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 22972 - 23052
Alignment:
Q  95 gttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttca 175  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  22972 gttatgatagactacgtcttctttatcttgacgaaatgggcggaatggctatcccaatgccaaaaataatcacgattttca 23052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 89 - 291
Target Start/End: Complemental strand, 35812 - 35611
Alignment:
Q  89 gaactagttatgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgat 188  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  35812 gaactagttatgatagactacgtcttctttatcttgatgaaatgggcggaataactatcccaatgccaaaaatattcatgattttcactatcttatcgat 35713  T
Q  189 ggcttctcttgcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaata 288  Q
    | |||||||||||||| |||||||||| |||| |||||||||||||||||        |||||| ||||| |||||||||||||||||||||||||||||    
T  35712 gacttctcttgcattgtcgggcatgagtggttctgttgccgaattgatag-tttttttggaatagttacttgtcaaaaatatcttttcatgatgaaaata 35614  T
Q  289 cta 291  Q
    |||    
T  35613 cta 35611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38538 - 38474
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattgg 65  Q
    |||| ||||||||||| || | ||||||||||| ||||||||||||||| |||||||||||||||    
T  38538 ggttatataagtgatattgagttcaacggggccgttttacaaataatatatcatggatttattgg 38474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 99 - 291
Target Start/End: Original strand, 9692 - 9884
Alignment:
Q  99 tgatagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctctt 198  Q
    |||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  9692 tgatagaccacgtcttctttatcttgacgaaatgggcggaatgactatcccaatgcaaaaaatattcacgattttcactatcttatcgatgacttctttt 9791  T
Q  199 gcattgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatacta 291  Q
    |||||| |||||||||| | |||| |||||||||| ||||        ||||||||||||||||||||| ||||||| |||||||||||||||    
T  9792 gcattgtcgggcatgagtgattttcttgccgaattaatagttttttctggaataattactagtcaaaaacatcttttaatgatgaaaatacta 9884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 172329 - 172655
Alignment:
Q  1 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgcccnnnnnnncttggcaggaactagttatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||   || ||    
T  172329 ggttctataagtgatactgggctcaacggggccattttacaaataatatctcatggatttattggggctgccctttttttcttggcaggaaccgcttctg 172428  T
Q  101 atagactacgtcttctttatcttgacgaaatgagcggaatggctatcccaatgccaaaaatattcacgattttcactatcttatcgatggcttctcttgc 200  Q
    ||||| | |||||| ||||||| || ||| || | |||||  ||||||||||||| ||||| || || || || | || ||| || ||||||||||||||    
T  172429 atagaatgcgtcttgtttatctcgaagaactgggaggaatatctatcccaatgcctaaaatttttaccatgtttagtagcttttcaatggcttctcttgc 172528  T
Q  201 attgccgggcatgagcggttttgttgccgaattgatagnnnnnnnnggaataattactagtcaaaaatatcttttcatgatgaaaatactaattactttt 300  Q
     || || || ||||| |||||||| || |||||  |||        ||| |||||||||||| ||||| | | || |||   |||  |||||||||||||    
T  172529 cttaccaggaatgagtggttttgtcgcagaattagtagtattttttggactaattactagtccaaaatttttgttaatgccaaaagcactaattactttt 172628  T
Q  301 gtaaccgcaattggaatgatattaact 327  Q
    ||||  |||||||||||||||||||||    
T  172629 gtaatggcaattggaatgatattaact 172655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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