View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13864_high_21 (Length: 435)

Name: NF13864_high_21
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13864_high_21
NF13864_high_21
[»] chr5 (30 HSPs)
chr5 (1-177)||(26668238-26668418)
chr5 (1-177)||(26939835-26940015)
chr5 (1-180)||(6154385-6154568)
chr5 (1-176)||(7452715-7452894)
chr5 (1-176)||(37247756-37247935)
chr5 (1-176)||(29166930-29167109)
chr5 (1-177)||(36424598-36424778)
chr5 (1-177)||(37646011-37646193)
chr5 (1-176)||(36430478-36430655)
chr5 (1-177)||(37536893-37537074)
chr5 (1-175)||(10759320-10759497)
chr5 (1-177)||(39519355-39519525)
chr5 (15-176)||(20180112-20180275)
chr5 (1-176)||(39523994-39524163)
chr5 (1-175)||(12104014-12104183)
chr5 (1-143)||(17162816-17162964)
chr5 (2-143)||(35678888-35679033)
chr5 (39-162)||(23757135-23757262)
chr5 (39-162)||(23822591-23822718)
chr5 (1-95)||(40148803-40148897)
chr5 (14-116)||(6511622-6511726)
chr5 (4-143)||(23689034-23689177)
chr5 (13-143)||(4872854-4872988)
chr5 (1-114)||(17159336-17159452)
chr5 (1-109)||(40567628-40567738)
chr5 (87-176)||(40150243-40150334)
chr5 (2-143)||(9725763-9725902)
chr5 (2-72)||(16115294-16115364)
chr5 (129-176)||(25668156-25668203)
chr5 (84-143)||(22832496-22832557)
[»] chr1 (20 HSPs)
chr1 (1-177)||(10136285-10136465)
chr1 (1-177)||(25844716-25844896)
chr1 (1-177)||(26926685-26926856)
chr1 (1-174)||(16648591-16648766)
chr1 (1-132)||(51040522-51040657)
chr1 (2-143)||(16036567-16036712)
chr1 (1-143)||(19797984-19798131)
chr1 (1-143)||(23191829-23191973)
chr1 (1-146)||(38622149-38622298)
chr1 (1-143)||(40166900-40167046)
chr1 (1-106)||(11807179-11807286)
chr1 (1-92)||(12260936-12261028)
chr1 (50-176)||(8138602-8138728)
chr1 (1-97)||(39199805-39199907)
chr1 (35-116)||(46697309-46697390)
chr1 (1-46)||(10141053-10141098)
chr1 (1-97)||(39586119-39586214)
chr1 (89-177)||(5100131-5100220)
chr1 (1-51)||(47450279-47450329)
chr1 (128-176)||(39199733-39199781)
[»] chr4 (39 HSPs)
chr4 (1-176)||(8694673-8694852)
chr4 (1-176)||(31728323-31728501)
chr4 (1-177)||(37263519-37263699)
chr4 (1-177)||(5270379-5270559)
chr4 (9-176)||(31274482-31274653)
chr4 (1-176)||(37258822-37258999)
chr4 (1-181)||(16422006-16422189)
chr4 (1-176)||(2820752-2820930)
chr4 (1-177)||(33467959-33468138)
chr4 (1-176)||(5925761-5925931)
chr4 (1-177)||(12822866-12823046)
chr4 (1-164)||(55252604-55252772)
chr4 (1-176)||(13064770-13064946)
chr4 (1-173)||(51698889-51699065)
chr4 (21-177)||(19907269-19907428)
chr4 (1-177)||(29349163-29349341)
chr4 (1-177)||(13060426-13060607)
chr4 (1-178)||(33462313-33462490)
chr4 (1-176)||(31766832-31766998)
chr4 (2-143)||(19107539-19107685)
chr4 (2-143)||(19102927-19103072)
chr4 (5-178)||(32081122-32081297)
chr4 (1-138)||(27183195-27183326)
chr4 (1-176)||(32220527-32220700)
chr4 (1-177)||(12875364-12875551)
chr4 (1-176)||(23094069-23094246)
chr4 (7-139)||(40408913-40409046)
chr4 (14-116)||(47245103-47245205)
chr4 (11-140)||(8029328-8029457)
chr4 (1-143)||(8028148-8028284)
chr4 (1-76)||(6943744-6943819)
chr4 (2-143)||(48275829-48275971)
chr4 (1-112)||(12878862-12878974)
chr4 (1-61)||(19907208-19907268)
chr4 (19-106)||(29985010-29985099)
chr4 (1-66)||(16948961-16949026)
chr4 (53-116)||(28601630-28601695)
chr4 (97-176)||(6943820-6943901)
chr4 (1-40)||(16958266-16958305)
[»] chr3 (28 HSPs)
chr3 (1-176)||(18472966-18473145)
chr3 (1-160)||(55326737-55326899)
chr3 (1-176)||(757321-757499)
chr3 (1-178)||(7570170-7570351)
chr3 (1-177)||(23660445-23660625)
chr3 (1-177)||(23665077-23665257)
chr3 (1-177)||(18468172-18468352)
chr3 (1-176)||(14437650-14437826)
chr3 (1-177)||(20520921-20521101)
chr3 (1-177)||(27709891-27710068)
chr3 (1-176)||(12970765-12970945)
chr3 (1-176)||(46964973-46965151)
chr3 (1-143)||(55432187-55432330)
chr3 (2-143)||(3656247-3656392)
chr3 (16-179)||(20175368-20175532)
chr3 (15-176)||(3426047-3426209)
chr3 (1-158)||(12964857-12965020)
chr3 (2-143)||(29351188-29351334)
chr3 (1-85)||(39774877-39774961)
chr3 (94-171)||(32473106-32473185)
chr3 (19-98)||(7860686-7860767)
chr3 (1-105)||(12111622-12111721)
chr3 (1-85)||(12565183-12565268)
chr3 (1-85)||(13259582-13259667)
chr3 (61-143)||(38891137-38891222)
chr3 (2-106)||(2206859-2206962)
chr3 (5-106)||(13149714-13149821)
chr3 (26-77)||(20508837-20508888)
[»] chr2 (32 HSPs)
chr2 (1-176)||(18345376-18345555)
chr2 (1-177)||(30651874-30652054)
chr2 (1-177)||(17974307-17974487)
chr2 (1-177)||(9184373-9184554)
chr2 (1-176)||(17967921-17968100)
chr2 (1-176)||(9179683-9179863)
chr2 (1-176)||(12797889-12798069)
chr2 (1-176)||(19891464-19891641)
chr2 (1-177)||(25496340-25496520)
chr2 (1-176)||(29678638-29678817)
chr2 (1-176)||(12361209-12361384)
chr2 (1-176)||(25477246-25477425)
chr2 (1-174)||(19896910-19897085)
chr2 (1-177)||(24536972-24537159)
chr2 (18-174)||(20101609-20101769)
chr2 (54-176)||(1933966-1934092)
chr2 (2-143)||(31329023-31329168)
chr2 (2-143)||(31335744-31335889)
chr2 (2-143)||(42925666-42925809)
chr2 (5-95)||(40846622-40846714)
chr2 (4-101)||(15446317-15446416)
chr2 (2-143)||(28604047-28604191)
chr2 (1-116)||(44630466-44630584)
chr2 (1-78)||(25637824-25637900)
chr2 (1-60)||(34495183-34495242)
chr2 (125-176)||(40846478-40846529)
chr2 (1-104)||(32080336-32080443)
chr2 (19-106)||(7735507-7735596)
chr2 (14-92)||(12001944-12002022)
chr2 (1-35)||(1934093-1934127)
chr2 (2-103)||(7712074-7712177)
chr2 (45-116)||(38592188-38592260)
[»] chr6 (25 HSPs)
chr6 (1-177)||(17963514-17963694)
chr6 (1-177)||(16835117-16835298)
chr6 (1-170)||(6406824-6406996)
chr6 (1-176)||(11533659-11533837)
chr6 (1-176)||(11559169-11559347)
chr6 (1-178)||(11569648-11569827)
chr6 (3-171)||(22694347-22694517)
chr6 (1-174)||(19994344-19994520)
chr6 (1-157)||(17600340-17600497)
chr6 (1-174)||(20747256-20747433)
chr6 (1-159)||(12405334-12405496)
chr6 (1-171)||(33686606-33686779)
chr6 (16-174)||(11428933-11429094)
chr6 (1-176)||(11612861-11613039)
chr6 (5-160)||(2699087-2699247)
chr6 (2-139)||(19674734-19674874)
chr6 (9-143)||(12797772-12797914)
chr6 (14-143)||(12689942-12690074)
chr6 (1-116)||(25313492-25313609)
chr6 (1-116)||(26200986-26201103)
chr6 (1-140)||(22610471-22610612)
chr6 (1-79)||(5856945-5857023)
chr6 (1-116)||(17914552-17914670)
chr6 (117-174)||(5857039-5857096)
chr6 (5-46)||(14509941-14509982)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-178)||(8069-8250)
[»] chr8 (27 HSPs)
chr8 (1-176)||(40124851-40125030)
chr8 (2-173)||(15950528-15950707)
chr8 (1-173)||(28564258-28564431)
chr8 (1-176)||(1808411-1808589)
chr8 (1-162)||(38181253-38181418)
chr8 (1-176)||(28559074-28559252)
chr8 (1-161)||(18875357-18875521)
chr8 (1-176)||(44924878-44925057)
chr8 (1-162)||(2966545-2966710)
chr8 (1-176)||(1909904-1910083)
chr8 (1-168)||(26780064-26780234)
chr8 (1-176)||(33417490-33417650)
chr8 (19-177)||(7002623-7002784)
chr8 (28-124)||(17021243-17021341)
chr8 (28-124)||(17551680-17551778)
chr8 (84-176)||(17027137-17027225)
chr8 (84-176)||(17557629-17557717)
chr8 (1-116)||(17953166-17953281)
chr8 (1-92)||(24672364-24672455)
chr8 (1-176)||(23547568-23547740)
chr8 (13-67)||(31440200-31440254)
chr8 (21-116)||(17798029-17798124)
chr8 (1-77)||(33100548-33100623)
chr8 (5-36)||(17027105-17027136)
chr8 (5-36)||(17557597-17557628)
chr8 (14-75)||(28859363-28859422)
chr8 (1-100)||(5884858-5884956)
[»] chr7 (28 HSPs)
chr7 (1-176)||(4931183-4931362)
chr7 (1-176)||(26342167-26342344)
chr7 (1-176)||(3046534-3046712)
chr7 (1-177)||(12256982-12257161)
chr7 (1-178)||(21672165-21672345)
chr7 (1-176)||(3880928-3881110)
chr7 (1-146)||(42625565-42625719)
chr7 (2-143)||(26286146-26286293)
chr7 (32-168)||(44508261-44508401)
chr7 (45-177)||(2595774-2595910)
chr7 (5-177)||(10392043-10392221)
chr7 (2-104)||(13313345-13313449)
chr7 (1-85)||(12181804-12181888)
chr7 (1-138)||(23247554-23247694)
chr7 (53-177)||(12802295-12802422)
chr7 (2-116)||(4580426-4580542)
chr7 (21-136)||(23151683-23151804)
chr7 (17-143)||(30259238-30259368)
chr7 (1-116)||(15973681-15973800)
chr7 (1-76)||(10387410-10387486)
chr7 (5-83)||(9814929-9815008)
chr7 (5-71)||(10716866-10716933)
chr7 (1-56)||(12800350-12800405)
chr7 (6-51)||(6590099-6590144)
chr7 (1-77)||(27246608-27246682)
chr7 (1-53)||(8269260-8269312)
chr7 (1-57)||(16373308-16373364)
chr7 (1-39)||(44508427-44508465)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-173)||(30137-30313)
scaffold0054 (5-143)||(26405-26547)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-177)||(5024-5204)
scaffold0002 (1-176)||(442897-443075)
scaffold0002 (5-106)||(155181-155288)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1-177)||(6192-6373)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-176)||(4932-5108)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-173)||(36082-36257)
[»] scaffold0011 (1 HSPs)
scaffold0011 (18-143)||(64885-65013)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 26668238 - 26668418
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  26668238 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 26668337  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26668338 acacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 26668418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 26939835 - 26940015
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  26939835 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 26939934  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26939935 acacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 26940015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 6154568 - 6154385
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6154568 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 6154469  T
Q  99 acacaacattagatc-aaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaagc 180  Q
    ||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6154468 acacaacattagatcaaaatataattacttgatgtttaattttccaatttttcatccaacatcacatcaatgttccaacaaagc 6154385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7452715 - 7452894
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  7452715 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 7452814  T
Q  99 acacaacattagatca-aatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7452815 acacaacattagatcagagtataattactttgtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 7452894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37247935 - 37247756
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  37247935 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 37247836  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37247835 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 37247756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29167109 - 29166930
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||    
T  29167109 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtaggaccctcacactctattttttcaattc 29167010  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29167009 acacaacattaaatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 29166930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 36424598 - 36424778
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  36424598 tatcattaccaagtatttaaaattaaataccacaatttaagcactactaatgtgtgtgttctattttatgtgagacccccacactctattttttcaattc 36424697  T
Q  99 acacaacattagatca-aatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36424698 acacaacattagatcatagtataattacttggtgtttaatcttccaattttttatccaacatcacatcaatgttccaacaa 36424778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 37646193 - 37646011
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactacta--atgtgtgtgttctattttatgtgggacccccaca--ctattttttcaat 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  37646193 tatcattatcaagtatttaaaattaaataccacaatttaaacactaataatatgtgtgtgttctattttatgtgggacccccacactctattttttcaat 37646094  T
Q  97 tcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  37646093 tcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatcaagcatcacatcaatgttccaacaa 37646011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 36430478 - 36430655
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  36430478 tatcattaccaaatatttaaaattaaataccataatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 36430577  T
Q  99 acacaacattaga-tcaaatataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||| | |||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  36430578 acacaacattagattaaaatataatta-cgatatttaatcttccaatttttcatccaacatcacatcaatgttccaaca 36430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 37537074 - 37536893
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactacta--atgtgtgtgttctattttatgtgggacccc-cacactattttttcaatt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37537074 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgtgttctattttatgtgggaccccacactctattttttcaatt 37536975  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||| |||||| |||||||| ||| |||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  37536974 cacacaacattatatcaaagtataattacttgatgtttaatcttctaatttttcatcaagcatcacatcaatgttccaacaa 37536893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 10759497 - 10759320
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||  ||| ||||||||| |||||    
T  10759497 tatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtctgttctattttatgtgggacccctacactctatttttttaattc 10759398  T
Q  99 acacaacattagatc-aaatataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 175  Q
    ||||||||||| ||| ||||||||||| | ||||||||||||||||||| |  ||||||||||||  |||||||||||    
T  10759397 acacaacattaaatcaaaatataattacttgtgtttaatcttccaatttattttccaacatcacactaatgttccaac 10759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 39519355 - 39519525
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattc 98  Q
    ||||| ||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  39519355 tatcactatcaagtatttaaaattaaataccacaatttaa----------tgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 39519444  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39519445 acacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 39519525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 20180275 - 20180112
Alignment:
Q  15 atttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcacacaacattagatca 114  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||| |    
T  20180275 atttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtgggtcccacatcctattttctcaattcacacaacattagatta 20180176  T
Q  115 aa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    || |||||||| |||||||||||||||||||||||||  ||| ||||||| |||||||||||||    
T  20180175 aagtataattacttggtgtttaatcttccaatttttctaccagcatcacaccaatgttccaaca 20180112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39523994 - 39524163
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattc 98  Q
    ||||| ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||  |||||||||||||  |||||||||||||    
T  39523994 tatcactatcaagtatttaaaattaaataccacaatttaa----------tgtgtgtgttctattttatgctggacccccacactctattttttcaattc 39524083  T
Q  99 acacaacattagatcaaa-tataattatt-ggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39524084 acacaacattagatcaaagtatatttatttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 39524163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 12104014 - 12104183
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||       | || ||| ||    
T  12104014 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttccattttatgtgggacccccac-------tctctatttac 12104106  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 175  Q
    |||||||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||  |||||||||||    
T  12104107 acaacattagatcaaagtataattacttggtgtttcatcttctaatttttcttccaacatcacactaatgttccaac 12104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17162816 - 17162964
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaatt 97  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  17162816 tatcattatcaggtatttaaaaattaaatacctcaatttaaacaccactaatgtgtgtgttctattttatgtgggactcccacattctattttttcaatt 17162915  T
Q  98 cacacaacattagatca-aatataatta--ttggtgtttaatcttccaa 143  Q
    || |||||||||||||| ||| ||||||  |||||||||| ||||||||    
T  17162916 catacaacattagatcataatctaattaacttggtgtttagtcttccaa 17162964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 35679033 - 35678888
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccc--ccacactattttttcaattca 99  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |   ||| ||||||||||||||||    
T  35679033 atcattatcaggtatttaaaataaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggactcttacactctattttttcaattca 35678934  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | |||||| ||| |||||||||||||||    
T  35678933 cacaacactagatcaaagtttaattacttgatgtttaatcttccaa 35678888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 23757262 - 23757135
Alignment:
Q  39 aaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattagatc-aaatataatta-ttggtgttta 134  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| || |||||||| ||||||||||    
T  23757262 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23757163  T
Q  135 atcttccaatttttcatccaacatcaca 162  Q
    ||||||||||||||| ||||||||||||    
T  23757162 atcttccaatttttcttccaacatcaca 23757135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 23822718 - 23822591
Alignment:
Q  39 aaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattagatc-aaatataatta-ttggtgttta 134  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||| || |||||||| ||||||||||    
T  23822718 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23822619  T
Q  135 atcttccaatttttcatccaacatcaca 162  Q
    ||||||||||||||| ||||||||||||    
T  23822618 atcttccaatttttcttccaacatcaca 23822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40148803 - 40148897
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaa 95  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  40148803 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtttgttctattttatgtgggacccacactctattttttcaa 40148897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 6511726 - 6511622
Alignment:
Q  14 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattcacacaacattaga 111  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||    
T  6511726 tatttaaaattaaatactgcaatttaaacactactaatgtgtgagttctattttatgtgggactcccacacttaattttttcaattcacacaacattaga 6511627  T
Q  112 tcaaa 116  Q
    |||||    
T  6511626 tcaaa 6511622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 23689034 - 23689177
Alignment:
Q  4 cattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattcaca 101  Q
    |||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||    
T  23689034 cattataaggtatttaaaattaaataccacaattttaacactacgaatgtgtgtgttctattttatgtgggatccccacactcaattttttcaatccaca 23689133  T
Q  102 caacattagatcaaa-tataatt-attggtgtttaatcttccaa 143  Q
     | || ||||||||| | |||||  |||||||||||||||||||    
T  23689134 aatcactagatcaaagtctaattgtttggtgtttaatcttccaa 23689177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 4872854 - 4872988
Alignment:
Q  13 gtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattag 110  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||| ||     
T  4872854 gtatttaaaattaaatatcactatttaaacactactattgtgtgtgttctattttatatggaacccccacactctattttttcaattcacacaacactaa 4872953  T
Q  111 atcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||||| | |||| | |||||||||||||||||||    
T  4872954 atcaaagtttaataatttggtgtttaatcttccaa 4872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17159336 - 17159452
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaatt 97  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||    
T  17159336 tatcattatcaggtatttaaaaattaaatacctcaattaaaacactactaatgtgtgtcttctattttatgtgggacacccacattctattttttcaatt 17159435  T
Q  98 cacacaacattagatca 114  Q
    || |||||| |||||||    
T  17159436 catacaacactagatca 17159452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40567738 - 40567628
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||| |  ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||| ||| |||||||||   |||||||| |||||    
T  40567738 tatcattataagatatttaaaattaaataccacaatttaatcactactaacgtgtgtgttttattttatatggtacccccacattatatttttttaattc 40567639  T
Q  99 acacaacatta 109  Q
    |||| ||||||    
T  40567638 acaccacatta 40567628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 40150243 - 40150334
Alignment:
Q  87 ttttttcaattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |  | ||||||||||  ||||||||||||    
T  40150243 ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttatttttcaacatcacactaatgttccaaca 40150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 9725902 - 9725763
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaattc 98  Q
    |||||||||  ||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||  |||||||    ||||||||||||    
T  9725902 atcattatccggtatttaaaattaaataccactatttaaacact-------tgtgtgttctattttatgtgggacatccacactctatttttttcaattc 9725810  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||||||| || |||||| | |||| | |||||||||||||||||||    
T  9725809 acacaacactatatcaaagtttaataacttggtgtttaatcttccaa 9725763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 16115364 - 16115294
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtg 72  Q
    ||||||| |||||||||||||||||| |||  |||||||||| ||||||||||||||||  ||||||||||    
T  16115364 atcattagcaagtatttaaaattaaacaccgtaatttaaacattactaatgtgtgtgtttcattttatgtg 16115294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 25668203 - 25668156
Alignment:
Q  129 tgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||||| |||||||  ||| |||||||||||||    
T  25668203 tgtttaatcttccaatttttcttccaacacaacaccaatgttccaaca 25668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 22832557 - 22832496
Alignment:
Q  84 ctattttttcaattcacacaacattagatca-aatataatt-attggtgtttaatcttccaa 143  Q
    ||||||||||||||||||||||| || |||| ||| |||||  |||||||||||||||||||    
T  22832557 ctattttttcaattcacacaacactaaatcataatctaattccttggtgtttaatcttccaa 22832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 2e-81; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 10136285 - 10136465
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10136285 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 10136384  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10136385 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 10136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25844716 - 25844896
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  25844716 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 25844815  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25844816 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 25844896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 26926856 - 26926685
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaa-cactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattc 98  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||   |||      |||||||    
T  26926856 tatcattatcaagtatttaaaaattaaataccacaatttaaaacactactaatgtgtgtgttctattttatgtgggatccc---act------tcaattc 26926766  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26926765 acacaacattaaatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 26926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 16648766 - 16648591
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc---cacactattttttcaatt 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||    
T  16648766 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccctacactctattttttcaatt 16648667  T
Q  98 cacacaacattagatcaaa-tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
     |||||||||||||||||| ||||||||   ||||||||||||| ||||| |  ||||| ||||||  ||||||||||    
T  16648666 tacacaacattagatcaaagtataatta--cgtgtttaatcttctaatttattttccaaaatcacactaatgttccaa 16648591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 51040657 - 51040522
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaattc 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  51040657 tatcattatcaagtatttaaaattaaataacacaatttaaacactactaatgtgtgtgttctatttcatgtgggactcccacactttattttttcaattc 51040558  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtt 132  Q
    |||||||||||||||||| |||||||| ||||||||    
T  51040557 acacaacattagatcaaagtataattacttggtgtt 51040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 16036567 - 16036712
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  16036567 atcattatcaggtatttaaatttaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattca 16036666  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | || ||| |||||||||||||||||||    
T  16036667 cacaacactagatcaaagtttagttacttggtgtttaatcttccaa 16036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19798131 - 19797984
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac-ccccacact---attttttcaat 96  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||| |||||||||    ||||||||||    
T  19798131 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgcgagttctattttatgtgggaccccccacactttatttttttcaat 19798032  T
Q  97 tcacacaacattagatcaaatataatta-ttggtgtttaatcttccaa 143  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  19798031 tcacacaacattagatcaaatataattacttggtatttaattttccaa 19797984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 23191973 - 23191829
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||   ||| ||| |||||||||||||||||    
T  23191973 tatcattatcaggtatttaaaattaaataccactacttaaacactactaatgtgtgtgttctattttatgtgacccccacactctattttttcaattcac 23191874  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||||| ||||||||| | |||| | |||||||||||||||||||    
T  23191873 acaacactagatcaaagtttaataacttggtgtttaatcttccaa 23191829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 38622149 - 38622298
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||| ||||| ||||||  || |||||||||||||||| |||| ||||||||||||||||||| ||||||  |||||||||||||||    
T  38622149 tatcattatcaagtattcaaaatcaaatactgcattttaaacactactaatatgtgagttctattttatgtgggactcccacactctattttttcaattc 38622248  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaattt 146  Q
    |||||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  38622249 acacaacattagatcaaagtataattacttgatttttaatcttccaattt 38622298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 40166900 - 40167046
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||| |||  |||||||||||||||    
T  40166900 tatcattatcaggtatttaaaattaaataccactgtttaaacactactgatgtgtgtcttctattttatttgggacccctacattctattttttcaattc 40166999  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||||| | ||||||||| | |||| | |||||||||||||||||||    
T  40167000 acacaatactagatcaaagtttaataacttggtgtttaatcttccaa 40167046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11807179 - 11807286
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtggga--cccccacactattttttcaattc 98  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |   || ||| |||||||||||||||    
T  11807179 tatcattatcaagtatttaaatttaaataccacaatttaaacactgctaatgtgtgtgttctattttatgtggaatctccgcactctattttttcaattc 11807278  T
Q  99 acacaaca 106  Q
    ||||||||    
T  11807279 acacaaca 11807286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12260936 - 12261028
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactatttttt 92  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  12260936 tatcattatcaagtatttaaaattaaataccactatttaaacactactaatgagtgtgttctattttatgtgggaccccacactctatttttt 12261028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 8138602 - 8138728
Alignment:
Q  50 atgtgtgtgttctattttatgtgggaccccc-acactattttttcaattcacacaacattagatcaaa-tataattattggtgtttaatcttccaatttt 147  Q
    ||||||||||||||||||||||| |||||   || ||||||||||||||||||||| |||| |||||| |||||||| |  | |||||||||||||||||    
T  8138602 atgtgtgtgttctattttatgtgtgacccgatactctattttttcaattcacacaatattatatcaaagtataattact--tatttaatcttccaatttt 8138699  T
Q  148 tcatccaacatcacatcaatgttccaaca 176  Q
    || ||||| ||||||||||||||||||||    
T  8138700 tcttccaagatcacatcaatgttccaaca 8138728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39199907 - 39199805
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacac----tactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttca 94  Q
    ||||||||| |||||||||||| |||||||  ||||||||||||    || |||||||||||||||||||||||||||||| |||||  |||||||||||    
T  39199907 tatcattattaagtatttaaaagtaaatactgcaatttaaacacacactattaatgtgtgtgttctattttatgtgggacctccacactctattttttca 39199808  T
Q  95 att 97  Q
    |||    
T  39199807 att 39199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 46697309 - 46697390
Alignment:
Q  35 atttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcacacaacattagatcaaa 116  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||  || ||||||||||||||||||||||| || ||||||    
T  46697309 atttaaacattactaatgtatgtgttatattttatgtgggacccatactctattttttcaattcacacaacactaaatcaaa 46697390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10141053 - 10141098
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacacta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10141053 tatcattatcaagtatttaaaattaaataccacaatttaaacacta 10141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39586214 - 39586119
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaatt 97  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||| || |||  ||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  39586214 tatcattatcaggtatttaaaattaaatatcactatttaaaca-tattaa--tgtttgttctattttatgtgggacctccacactctattttttcaatt 39586119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 5100220 - 5100131
Alignment:
Q  89 ttttcaattcacacaacattagatcaaa-tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||||||| |||||||||| ||| |||||||| | ||||||||||||||||||| |  ||||||||||||  |||||| ||||||    
T  5100220 ttttcaattcacataacattagattaaagtataattacttgtgtttaatcttccaatttattttccaacatcacactaatgttacaacaa 5100131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47450329 - 47450279
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaat 51  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  47450329 tatcattatcaagtatttaaaattaaataacgcagtttaaacactactaat 47450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 39199781 - 39199733
Alignment:
Q  128 gtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  39199781 gtgtttaatcttccaatttttcttcccacatcacaccaatgttccaaca 39199733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 8694673 - 8694852
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  8694673 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 8694772  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8694773 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 8694852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 31728501 - 31728323
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  31728501 tatcattatgaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattca 31728402  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31728401 cacaacattagatcaaattataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 31728323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 37263699 - 37263519
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  37263699 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 37263600  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37263599 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatcaaacatcacatcaatgttccaacaa 37263519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 5270559 - 5270379
Alignment:
Q  1 tatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattc 98  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  5270559 tatcattatcaaagtatttaaaattaaataccacaatttaaatactactaatgtgtgtgttctattttatgtgggaccccacattctattttttcaattc 5270460  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5270459 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 5270379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 31274482 - 31274653
Alignment:
Q  9 tcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaaca 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  31274482 tcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattcacacaaca 31274581  T
Q  107 ttagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31274582 ttagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 31274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37258999 - 37258822
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  37258999 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 37258900  T
Q  99 acacaacattagatcaaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37258899 acacaacattagatcaaa-gtaattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 37258822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 16422006 - 16422189
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  16422006 tatcattatcaagtattgaaaattaaataccgcaatttaaacactactaatgcgtgtgttctattttatgtgggacccccacactctattttttcaattc 16422105  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaagca 181  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||    
T  16422106 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcaca-caatgttccaacaaagca 16422189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 2820752 - 2820930
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  2820752 tatcattatcaaataattaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctaatttttcaattc 2820851  T
Q  99 acacaacattagatcaaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||| |||||||||||||    
T  2820852 acacaacactagatcaaatataattacttggtgtttaatcttccaattttccttccaacttcacaccaatgttccaaca 2820930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 33468138 - 33467959
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtggg-acccccacactattttttcaattca 99  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||| |    
T  33468138 tatcattatcaagtatttaaaattaaatactacaatttaaacactactaatgtgtgtgttctattttatgtgggaacctacactctattttttcaattta 33468039  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||||||||    
T  33468038 cacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcttccaacatcacactaatgttccaacaa 33467959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 5925931 - 5925761
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||     |||||||||||||||    
T  5925931 tatcattatcaagtatttaaaattaaataccataatttaaacactactaatgt--gtgttctattttatgtgggaccccc-----attttttcaattcac 5925839  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5925838 acaacattatatcaaagtataattacttggtatttaatcttccaatttttcatccaacatcacatcaatgttccaaca 5925761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 12823046 - 12822866
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  12823046 tatcattataaagtatttaaaattaaataccacagtttaaacactactaatgtgtgagttctattttatgtgggacccccacactctattttttcaattc 12822947  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||| |  ||||||||||||  |||||||||||||    
T  12822946 acacaacattagatcaaagtataattatttggtgtttgatcttccaatttattttccaacatcacactaatgttccaacaa 12822866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 55252604 - 55252772
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaatt 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||    
T  55252604 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccaccacactctatttttttcaatt 55252703  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatc 164  Q
    |||||||||||| |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  55252704 cacacaacattaaatcaaagtataattacttgatgtttagtcttccaatttttcatccaacatcacatc 55252772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13064946 - 13064770
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  13064946 tatcattatcaagtatttaaaattaaataccgcaatttaaacactattgatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 13064847  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |   |||||||||||||| |||||||| ||||| |||| | |||||||||||| |||||||||||| |||||||||||||    
T  13064846 a---aacattagatcaaagtataattacttggtatttatttttccaatttttcttccaacatcacaccaatgttccaaca 13064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51698889 - 51699065
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  51698889 tatcattatcaagcatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 51698988  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 173  Q
    || ||||||||| ||||| |||||||| ||||||||||||||| |||||| |  |||||||||| |  |||||||||    
T  51698989 acgcaacattagttcaaagtataattatttggtgtttaatctttcaatttattttccaacatcaaactaatgttcca 51699065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 19907269 - 19907428
Alignment:
Q  21 aattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattcacacaacattagatc-aaata 118  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||| |||||| |||||    
T  19907269 aattaaataccgcaatttaaacactgctaatgtgtgtgttctattttatgtgagaccccacactttattttttcaattcacacaacactagatcaaaata 19907368  T
Q  119 taatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  19907369 taattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgttccaacaa 19907428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 29349341 - 29349163
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc-cccacactattttttcaattca 99  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| | ||| ||||||||||||||||    
T  29349341 tatcattatccagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgagttctattttatgtgggacctcacactctattttttcaattca 29349242  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    | ||||| || |||||| |||||||| || ||||||||||||||| |||| | |||||||||||| ||||||||||||||    
T  29349241 ctcaacacta-atcaaagtataattacttagtgtttaatcttccagttttccttccaacatcacaccaatgttccaacaa 29349163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 13060426 - 13060607
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaatt 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| ||||||||| |||| |||||||    |||||||||||    
T  13060426 tatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgagttcttttttatgtgtgaccaccacactctatttttttcaatt 13060525  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||| ||||||||||| |||||||| |||| ||||||||||||||||| |  | ||||||||||  |||||||||||||    
T  13060526 cacacaatattagatcaaagtataattacttggggtttaatcttccaatttatttttcaacatcacactaatgttccaacaa 13060607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 33462490 - 33462313
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |  |||||||| ||||||| |||||  |||||||||||||||    
T  33462490 tatcattatcaagtatttaaaattaaacactgcaatttaaacactactaatgtgtgtct--tattttat-tgggacctccacactctattttttcaattc 33462394  T
Q  99 acacaacattagatcaaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
    |||||||||||||||||||||||||| ||||||||||||  | ||||||||| || ||||| |||  ||||||||||||||    
T  33462393 acacaacattagatcaaatataattatttggtgtttaattattcaatttttcttcgaacattacactaatgttccaacaaa 33462313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31766832 - 31766998
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--cta-ttttttcaat 96  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  31766832 tatcattatcaagtatttaaaaattaaataccacaatttaa-cactattaatgtgtgtgttctattttatgtgggacccccacaatctatttttttcaat 31766930  T
Q  97 tcacacaacattagatcaaatataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||| ||||||||||||||           || ||||||||| ||||||||||||||||||||||||||||||||||||    
T  31766931 tcaca-aacattagatcaaa-----------gtatttaatctttcaatttttcatccaacatcacatcaatgttccaaca 31766998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 19107539 - 19107685
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||    
T  19107539 atcattatcaggtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctatattttcaattca 19107638  T
Q  100 cacaaca-ttagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||| | |||||||||| | |||| | |||||||||||||||||||    
T  19107639 cacaatacttagatcaaagtttaataacttggtgtttaatcttccaa 19107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 19102927 - 19103072
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  19102927 atcattatcaggtatttaaaattaaatatcactatttaaacactattaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattca 19103026  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | |||| | |||| ||||||||||||||    
T  19103027 cacaacactagatcaaagtttaataacttggagtttaatcttccaa 19103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 32081297 - 32081122
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacac 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||  |||||||||||||||||      
T  32081297 attatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgagttctattttacgtgggacctccacactctattttttcaattcac-- 32081200  T
Q  103 aacattagatcaaa-tataatta--ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
     ||||||||||||| ||||||||   |  |||||||||||||||||| |  ||||||||||| | |||| | |||||||    
T  32081199 -acattagatcaaagtataattactattatgtttaatcttccaatttattttccaacatcaccttaatgcttcaacaaa 32081122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 27183195 - 27183326
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||      |||||||||||||    
T  27183195 tatcattatcaagtatttaaaattaaataccataatttaaacactactaa--tgtgtgttctattttatgtgggaccccca------tttttcaattcac 27183286  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatct 138  Q
    ||||||||| |||||| |||||||| ||||| ||||||||    
T  27183287 acaacattatatcaaagtataattacttggtatttaatct 27183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 32220700 - 32220527
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||| |||||||||||||||| |  ||||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||| |||||    
T  32220700 tatcattatcaaatatttaaaattaaatatcggaatttaaacactaataatgtgtatgttctattttatgtgggacccccacactctatttttttaattc 32220601  T
Q  99 acacaacattagatc-aaatataattattggtgtttaatcttccaatttttcatcc-aacatcacatcaatgttccaaca 176  Q
    |||||| |||||||| |||||||||||       |||||||| ||||||||| ||| ||||| | |||||||||||||||    
T  32220600 acacaatattagatcaaaatataatta------cttaatctttcaatttttcttcctaacattatatcaatgttccaaca 32220527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 12875364 - 12875551
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||| |||||||||| ||||||||| ||||||| | |||||||||||| |||||||||||||  |||||||||||  |||||||||||||||    
T  12875364 tatcattatcaaatatttaaaatcaaataccactatttaaatattactaatgtgtgggttctattttatgcaggacccccacactctattttttcaattc 12875463  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttca-------tccaacatcacatcaatgttccaacaa 177  Q
    |||||||| ||||| ||| | |||||| |||||||||||||||| || ||| ||       |||||||||||| ||||||||||||||    
T  12875464 acacaacactagatgaaagtctaattacttggtgtttaatcttctaactttccaatttccttccaacatcacaccaatgttccaacaa 12875551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23094069 - 23094246
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||||||||||||||||||||||  |  ||||||| ||||||||||||||||||| ||||||||||||  ||| | | ||||||||||||||||     
T  23094069 tatcattatcaagtatttaaaattaaatctcgtaatttaatcactactaatgtgtgtgttttattttatgtggaccccactctctattttttcaattcat 23094168  T
Q  101 acaacattagatcaaa-tataatt-attggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |  ||||||| ||||| | |||||  ||||||||||||||| ||||||||  || ||| |||||||||||||||||||    
T  23094169 atcacattagctcaaattctaattccttggtgtttaatctttcaattttttttctaacttcacatcaatgttccaaca 23094246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 40408913 - 40409046
Alignment:
Q  7 tatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcacacaaca 106  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||| | |||||||||||||||| |||||| ||||||    
T  40408913 tatcaaatatttaaaattaaataccgcaatttaaacactaataatatgtgtgttctattttatttggta-ccccacactatttttttaattcatacaaca 40409011  T
Q  107 ttagatcaaa-tataatta-ttggtgtttaatctt 139  Q
    |||||||||| |||||| | || ||||||||||||    
T  40409012 ttagatcaaagtataatcatttagtgtttaatctt 40409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 47245103 - 47245205
Alignment:
Q  14 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcacacaacattagatc 113  Q
    |||||||||||||||| | | |||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| | ||||||    
T  47245103 tatttaaaattaaatatcgctatttaaacactaataatgtgtgtgttctattttatttaggatccccacactattttttcaattcacacaatactagatc 47245202  T
Q  114 aaa 116  Q
    |||    
T  47245203 aaa 47245205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 8029457 - 8029328
Alignment:
Q  11 aagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacatt 108  Q
    ||||||||||||||||||||||| || ||||||||     |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | |    
T  8029457 aagtatttaaaattaaataccactatgtaaacactg----tgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaatact 8029362  T
Q  109 agatcaaa-tataatta-ttggtgtttaatcttc 140  Q
    |||||||| | |||||| ||||||||||||||||    
T  8029361 agatcaaagtttaattacttggtgtttaatcttc 8029328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8028284 - 8028148
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||| |  ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||     |   ||| |||||||||||||||||    
T  8028284 tatcattattagttatttaaaattaaatacaactatttaaacactactaatgtgtgtgttctattttatg-----cttacactctattttttcaattcac 8028190  T
Q  101 acaacattagatcaaa-tataattattggtgtttaatcttccaa 143  Q
    |||||||| ||||||| | |||||| |  |||||||||||||||    
T  8028189 acaacattcgatcaaagtttaattact--tgtttaatcttccaa 8028148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6943744 - 6943819
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac 76  Q
    |||||||||||||||||| |||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||    
T  6943744 tatcattatcaagtatttgaaattaaatacagcaatttaaacattactaatgtatgtgttctattttatgtgggac 6943819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 48275971 - 48275829
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||| |||||||||||| |||||||||| ||||||||||| |||  ||||||||| |||||||| | |||||||||||  ||||||||||||||||    
T  48275971 atcattattaagtatttaaaaataaataccactatttaaacactgcta--gtgtgtgttatattttatat-ggacccccacactctattttttcaattca 48275875  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||||||  |||||||| | |||| | ||| |||||||||||||||    
T  48275874 cacaacacaagatcaaagtttaataacttgatgtttaatcttccaa 48275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12878862 - 12878974
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc--acactattttttcaattc 98  Q
    ||||||||||||||||||| ||| ||||| ||  |||||||||||| |||||||| ||||||||||||||||||| || |  || |||||||||||||||    
T  12878862 tatcattatcaagtatttataat-aaatatcattatttaaacactattaatgtgtatgttctattttatgtgggatcctcttactctattttttcaattc 12878960  T
Q  99 acacaacattagat 112  Q
    |||||||| |||||    
T  12878961 acacaacactagat 12878974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19907208 - 19907268
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttc 61  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  19907208 tatcatcatcaagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgtgttc 19907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 29985099 - 29985010
Alignment:
Q  19 aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac--ccccacactattttttcaattcacacaaca 106  Q
    |||||||||||| ||| | |||||||||||||| ||| || ||||||||| |||||||  || ||| |||||||||||||||||||||||    
T  29985099 aaaattaaatacaacattgtaaacactactaatttgtttgctctattttacgtgggacatccacactctattttttcaattcacacaaca 29985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16948961 - 16949026
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattt 66  Q
    ||||||||||||||||| |||| ||||||| | ||||| |||||||||||| ||||||||||||||    
T  16948961 tatcattatcaagtattcaaaactaaatacaagaatttgaacactactaatatgtgtgttctattt 16949026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 28601630 - 28601695
Alignment:
Q  53 tgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattagatcaaa 116  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||||  || |||||||||    
T  28601630 tgtgtgttctattttatgtgggacccccacattctatttttttaattcacaccgcactagatcaaa 28601695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 6943820 - 6943901
Alignment:
Q  97 tcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||| || |||||| |||||||| ||| ||||||||||||||||||||| ||||||||||||  |||||| |||||    
T  6943820 tcacacaacagtaaatcaaagtataattacttgatgtttaatcttccaatttttcttccaacatcacactaatgttgcaaca 6943901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16958266 - 16958305
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaa 40  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  16958266 tatcattatgaagtatttaaaattaaatacaacaatttaa 16958305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 1e-78; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18472966 - 18473145
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18472966 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 18473065  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18473066 acacaacattagatcaaagtataattactttgtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 18473145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 55326737 - 55326899
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  55326737 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatattttttcaattc 55326836  T
Q  99 acacaacattagatcaaatataatta-ttggtgtttaatcttccaatttttcatccaacatca 160  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55326837 acacaacattagatcaaatataattacttggtgtttaatcttccaatttttcatccaacatca 55326899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 757499 - 757321
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  757499 tatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacccccacactctattttttcaattc 757401  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757400 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 757321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 7570351 - 7570170
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||||    
T  7570351 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgcgggacccccacactctattttttcaattc 7570252  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
    |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  7570251 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacattaatgttccaacaaa 7570170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 23660625 - 23660445
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||  |||||||||||||||    
T  23660625 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttttattttatgtgggagctccacactctattttttcaattc 23660526  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23660525 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 23660445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 23665257 - 23665077
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||  |||||||||||||||    
T  23665257 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatatgggagctccacactctattttttcaattc 23665158  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23665157 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 23665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 18468172 - 18468352
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaatt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    |||||||||||    
T  18468172 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatattatgt-agacccccacactctatttttttcaatt 18468270  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468271 cacacaacattagatcaaactataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 18468352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14437826 - 14437650
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  |||||||||||||||    
T  14437826 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacctccacactctattttttcaattc 14437727  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||   |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14437726 acacaac---agatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 14437650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 20520921 - 20521101
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  20520921 tatcattatcaagtatttaaagttaaataccgcaatttaaacactactaatgtgtgtattctattttatgtgggacccccacactctattttttcaattc 20521020  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  20521021 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaacaa 20521101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 27709891 - 27710068
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||| ||| ||||||||||||||||    
T  27709891 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaa--cgtatgttctattttatgtgggaccccacactctattttttcaattca 27709988  T
Q  100 cacaacatt-agatcaaa-tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||| | |||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27709989 cacaacattaaaatcaaagtataatacttggtgtttaatcttccaatttttcattcaacatcacatcaatgttccaacaa 27710068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 12970945 - 12970765
Alignment:
Q  1 tatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaatt 97  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||  |||||||||||||    
T  12970945 tatcattatccagtattttaaaattaaataccgcaatttaaacactactaaagtgtgtgttctattttatgtgggatcaccacactttattttttcaatt 12970846  T
Q  98 cacacaacattagatcaa-atataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  12970845 cacacaacattaaatcaacgtataattacttggtgtttaatcttccgatttttcatccaacatcatatcaatgttccaaca 12970765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 46964973 - 46965151
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||| ||| ||||  |||||||||||||||    
T  46964973 tatcattatcaagtatttaaaattaaataccgcagtttaaacacta-taatgtgtgagttctattttatgtggggccctcacactctattttttcaattc 46965071  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||| |||  ||||||||||||    
T  46965072 acacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacattacactaatgttccaaca 46965151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 55432187 - 55432330
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||  ||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  55432187 tatcattatcaaatatttaaaattaaatactgcaatttaaacactactaa--tgtgtgttctattttgtgtgggacccccacactttattttttcaattc 55432284  T
Q  99 acacaacattagatcaaatataatta-ttggtgtttaatcttccaa 143  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||    
T  55432285 acacagcattagatcaaatataattacttggtgtttaatcttccaa 55432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 3656392 - 3656247
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||| |||  ||||||||||||||||    
T  3656392 atcattatcaggtatttaaaattaaataccactatttaaacactactaatgtccgtgttctattttatgtgggacccctacattctattttttcaattca 3656293  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| || |||||| | |||||| |||||||||||||||||||    
T  3656292 cacaacactaaatcaaagtttaattacttggtgtttaatcttccaa 3656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 20175368 - 20175532
Alignment:
Q  16 tttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattcacacaacattagatca 114  Q
    |||||||||||||||  ||||||||| |||||||||||||||  |||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  20175368 tttaaaattaaatactgcaatttaaatactactaatgtgtgt--tctattttatgtggaaccccacactctattttttcaattaacacaacattagatca 20175465  T
Q  115 aa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaag 179  Q
    || |||||||| ||||||||||||||| |||||| |  ||||||||||||  |||||||||||||||    
T  20175466 aagtataattacttggtgtttaatctttcaatttattttccaacatcacactaatgttccaacaaag 20175532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 3426047 - 3426209
Alignment:
Q  15 atttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcacacaacattagatca 114  Q
    |||||||||| |||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||| | | |||| |||||||||||||| |||| |    
T  3426047 atttaaaattgaataccgcagtttaaacactactaatgtgtgagttctattttatgtggtacccccacattctatttt-aattcacacaacataagatta 3426145  T
Q  115 aa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    || |||||||| |||||||||||||||  ||||| |  ||||||||||||  ||||||||||||    
T  3426146 aagtataattacttggtgtttaatctttaaatttattttccaacatcacactaatgttccaaca 3426209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12965020 - 12964857
Alignment:
Q  1 tatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaat 96  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||| |||||||    ||||||||||    
T  12965020 tatcattatcaaatattttaaaattaaataccgcaatttaaacactactaaagtttgtgtt-tattttatgtgggaccaccacactctatttttttcaat 12964922  T
Q  97 tcacacaacattagatcaaa-tataatta-ttggtgtttaatc-ttccaatttttcatccaacat 158  Q
    |||  |||||||| |||||| |||||||| ||||||||||||| ||| |||||||||||||||||    
T  12964921 tcatgcaacattaaatcaaagtataattacttggtgtttaatcattctaatttttcatccaacat 12964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 29351188 - 29351334
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaattc 98  Q
    ||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| |||| ||    ||||||||||||    
T  29351188 atcattatcagatatttaaaattaaataccactatttaaacactaataatgtgtgtgttttattttatgtgggacctccacgctttatttttttcaattc 29351287  T
Q  99 acacaacattagatcaaa-tataat-tattggtgtttaatcttccaa 143  Q
    |||||||| | ||||||| | ||||  ||||||||||||||||||||    
T  29351288 acacaacactggatcaaagtttaataaattggtgtttaatcttccaa 29351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39774961 - 39774877
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | |||||||||    
T  39774961 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgtgaaatccccacact 39774877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 32473185 - 32473106
Alignment:
Q  94 aattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 171  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  32473185 aattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaatatcacatcaatgttc 32473106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 7860686 - 7860767
Alignment:
Q  19 aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  7860686 aaaattaaataccataatttaaacactattaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattc 7860767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12111721 - 12111622
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||||||| |||||||||||||||||  |||||||||| |||      ||||||||||||||||||| ||||| |||  || |||||||||||||    
T  12111721 tatcattatcaagcatttaaaattaaataccgaaatttaaacattacg-----gtgtgttctattttatgtgagacccacactttactttttcaattcac 12111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12565268 - 12565183
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact 85  Q
    ||||||||||| |||||||||| || |||| || |||||||| ||||||||||| | |||| |||||||| |||||||| ||||||    
T  12565268 tatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggaccctcacact 12565183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13259667 - 13259582
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact 85  Q
    ||||||||||| |||||||||| || |||| || |||||||| ||||||||||| | |||| |||||||| |||||||| ||||||    
T  13259667 tatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggaccctcacact 13259582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 38891137 - 38891222
Alignment:
Q  61 ctattttatgtgggacccc-cacactattttttcaattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||||||||||||| | |||  ||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||    
T  38891137 ctattttatgtgggacctcacactatattttttcaattcacaaaacattagatcaaagtttaattactcggtgtttaatcttccaa 38891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 2206962 - 2206859
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaattc 98  Q
    ||||||||||  ||| |||||||||||||  | |||||||||||||| ||||||    ||||||||||||||| ||||||||||    |||||||||||     
T  2206962 atcattatcagatatgtaaaattaaatactgctatttaaacactactgatgtgt----tctattttatgtgggtcccccacactctatttttttcaattt 2206867  T
Q  99 acacaaca 106  Q
    ||||||||    
T  2206866 acacaaca 2206859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 13149821 - 13149714
Alignment:
Q  5 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctatt---ttttcaattc 98  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||| |||| | | ||||||||||| ||||| || ||||  |||||   ||||||||||    
T  13149821 attatcaggtatttaaaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactctattttattttcaattc 13149722  T
Q  99 acacaaca 106  Q
    ||||||||    
T  13149721 acacaaca 13149714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 20508837 - 20508888
Alignment:
Q  26 aataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc 77  Q
    |||| ||||||||||||  || |||||||||||||||||||||| |||||||    
T  20508837 aatatcacaatttaaacgttattaatgtgtgtgttctattttatatgggacc 20508888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18345376 - 18345555
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  18345376 tatcattattaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctatttttttaattc 18345475  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18345476 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 18345555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 30651874 - 30652054
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  30651874 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 30651973  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30651974 acacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 30652054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 17974487 - 17974307
Alignment:
Q  1 tatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac-ccccacactattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  17974487 tatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacaccacactctattttttcaattc 17974388  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17974387 acacaacattagatcaaagtataattatttgatgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 17974307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9184554 - 9184373
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac----tattttttcaat 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||||||||||    
T  9184554 tatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttttcaat 9184456  T
Q  97 tcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9184455 tcacacaacattagatcaaagtttaattatttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 9184373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17968100 - 17967921
Alignment:
Q  1 tatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattc 98  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||| |||||    
T  17968100 tatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgtgggaccccacactctatttttttaattc 17968001  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17968000 acacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 17967921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 9179863 - 9179683
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac----tattttttcaat 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||||||||||    
T  9179863 tatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttttcaat 9179765  T
Q  97 tcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  9179764 tcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaccatcacatcaatattccaaca 9179683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12797889 - 12798069
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc-cccaca--ctattttttcaatt 97  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  12797889 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcccacactctattttttcaatt 12797988  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||  ||| ||||||||    
T  12797989 cacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcttccaacatcacactaatattccaaca 12798069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19891641 - 19891464
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||||  |||||||||||||||    
T  19891641 tatcattatcaagtatttaaaattaaataccacaatttaaacactaataa--tgtgtgttctattttatgtgggactcccacattctattttttcaattc 19891544  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||| ||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19891543 acacaagattagatcaaagtataattacatggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 19891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 25496520 - 25496340
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||    
T  25496520 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattc 25496421  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||||| |  ||||||||||||  |||||| ||||||    
T  25496420 acacaatattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacatcacacaaatgttacaacaa 25496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29678638 - 29678817
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||    
T  29678638 tatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccctacactctattttttcaattc 29678737  T
Q  99 acacaacattagatc-aaatataatt-attggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||| ||||||||||  || || ||||||||||||||||||| ||||||||||||  |||||| |||||    
T  29678738 acacaacattagatcaaaatataattccttagtatttaatcttccaatttttcttccaacatcacactaatgttgcaaca 29678817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 12361209 - 12361384
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||| ||  |||||||||||||||||    
T  12361209 tatcattatcaattatttaaaattaaataccacaatttaaacactactaa--tgtgtcttctattttatgtggaacccacattctattttttcaattcac 12361306  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| |  ||||||| ||||  ||||||||||||    
T  12361307 acaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacaccacactaatgttccaaca 12361384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 25477425 - 25477246
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||  ||||||||| |||||    
T  25477425 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtaagaccaccacactctatttttttaattc 25477326  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
     |||||||||| |||||| |||||||| ||| |||||||||||||||||| |  | ||||||||||  ||||||||||||    
T  25477325 gcacaacattaaatcaaagtataattatttgatgtttaatcttccaatttatttttcaacatcacactaatgttccaaca 25477246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19896910 - 19897085
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccca--cactattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||  | |||||||||||||||    
T  19896910 tatcattatcaaatatttaaaattaaataccgcaatttaaacactactaa--tgtgtgttctattttatgtgggacccccacgctctattttttcaattc 19897007  T
Q  99 acacaacattagatc-aaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    ||||||||||| ||| ||||||||||| ||| | |||||||||||| ||| || |||||||||| | |||||||||||    
T  19897008 acacaacattatatcaaaatataattacttgatatttaatcttccattttctcttccaacatcataccaatgttccaa 19897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 24537159 - 24536972
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||    
T  24537159 tatcattatcaagtatttaaaattaaataccgtagtttaaacactactaatgtatgtgttatattttatgtgggacccccacactctattttttcaattc 24537060  T
Q  99 acac-------aacattagatcaaa-tataatt-attggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||       ||||||||||||||  || ||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  24537059 acacaacattaaacattagatcaaagaatgattaattggtgtttaatcttccaatttttcttccaacataacaccaatgttccaacaa 24536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 20101769 - 20101609
Alignment:
Q  18 taaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattcacacaacattagatcaa 115  Q
    |||||||||||||   |||||||| ||||||||||||| ||||||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||||    
T  20101769 taaaattaaatacagtaatttaaatactactaatgtgtatgttctattttatgtggaaccccgacactctattttttcaattcacacaacattagatcaa 20101670  T
Q  116 a-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    | |||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  20101669 agtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaattttccaa 20101609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 1934092 - 1933966
Alignment:
Q  54 gtgtgttctattttatgtgggacc--cccacactattttttcaattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttc 149  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  1934092 gtgtgttctattttatgtgggacctccccactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttc 1933993  T
Q  150 atccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||||||||||||    
T  1933992 atccaacatcacatcaatgttccaaca 1933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 31329023 - 31329168
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||| |||||  ||||||||||||||||    
T  31329023 atcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactctattttttcaattca 31329122  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | |||| | |||||||||||||||||||    
T  31329123 cacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 31335744 - 31335889
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||| |||||  ||||||||||||||||    
T  31335744 atcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactctattttttcaattca 31335843  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | |||| | |||||||||||||||||||    
T  31335844 cacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31335889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 42925809 - 42925666
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||| |||||||| |||||  ||||||||||||||||    
T  42925809 atcattatcaggtatttaaaattaaatatcactatttaaacactactaatgt--gtgttctattttacgtgggacctccacactctattttttcaattca 42925712  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    ||||||| ||||||||| | |||||| |||||||||||||||||||    
T  42925711 cacaacactagatcaaagtttaattacttggtgtttaatcttccaa 42925666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 40846714 - 40846622
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  40846714 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggatccccacactctattttttcaa 40846622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 15446416 - 15446317
Alignment:
Q  4 cattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccc-ccacactattttttcaattcaca 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  15446416 cattatcaagtatttaaaaattaaataccacaatttaaacactactaatgtatgtgttctattttatgtgggacccaacactctattttttcaattcaca 15446317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 28604047 - 28604191
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc-cccacactattttttcaattcac 100  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||  |||| |||||  |||||||||||||||||| |  || |||||||||||||||||    
T  28604047 atcattatcatgtatttaaaattaaatatcactatttaaacactgataatctgtgtaatctattttatgtgggaccgcatactctattttttcaattcac 28604146  T
Q  101 acaacattagatc-aaatataatta-ttggtgtttaatcttccaa 143  Q
    |||||| |||||| |||| |||||| |||||||||||||||||||    
T  28604147 acaacactagatcaaaatttaattacttggtgtttaatcttccaa 28604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44630584 - 44630466
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccca--cacta-ttttttcaatt 97  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||    ||| |||||||||||    
T  44630584 tatcattatcaggtatttaaaattaaacaccactatttaaacaatactaatgtgtgtgttctattttatgtgggacctccaagttctatttttttcaatt 44630485  T
Q  98 cacacaacattagatcaaa 116  Q
    ||||||||| |||||||||    
T  44630484 cacacaacactagatcaaa 44630466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25637900 - 25637824
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccc 78  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||||||||||  |||||||||||||||||||||||    
T  25637900 tatcattatcaagtatttaaaaattaaataccgcagtttaaacactactaatgt--gtgttctattttatgtgggaccc 25637824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34495242 - 34495183
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgtt 60  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  34495242 tatcattatcaagtatttaaaattaaatactgcaatttaaacactaataatatgtgtgtt 34495183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 40846529 - 40846478
Alignment:
Q  125 ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  40846529 ttggtgtttaatcttccaatttttcttccaacatcacaccaatgttccaaca 40846478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32080336 - 32080443
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaat 96  Q
    ||||||||||| ||| |||||| ||||||| || ||| |||| |||| |||| ||||||||||||||||||||||||| ||| |||    ||||||||||    
T  32080336 tatcattatcaggtacttaaaaattaaatatcataatataaatactattaatatgtgtgttctattttatgtgggacctccaaactctatttttttcaat 32080435  T
Q  97 tcacacaa 104  Q
    ||||||||    
T  32080436 tcacacaa 32080443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 7735507 - 7735596
Alignment:
Q  19 aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaaca 106  Q
    ||||||||||| || ||| |||||||||||||| | |||||| |||||||| ||| ||| |||||  ||||| |||||||||||||||||    
T  7735507 aaaattaaatatcataatataaacactactaatatatgtgttatattttatatggcacctccacattctattctttcaattcacacaaca 7735596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 12002022 - 12001944
Alignment:
Q  14 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatttttt 92  Q
    |||| ||||||||||| | ||||| ||||||||||||||||||| || ||||||||||| ||| ||||| || ||||||    
T  12002022 tattaaaaattaaatatcgcaattcaaacactactaatgtgtgtattttattttatgtgagacacccactctgtttttt 12001944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1934127 - 1934093
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaa 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  1934127 tatcactatcaagtatttaaaattaaataccacaa 1934093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 7712177 - 7712074
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    ||||||||||  ||||||||| |||||| |||||| || ||| || |||| ||||||||||||| || ||| |||| | |||  | ||||||| ||||||    
T  7712177 atcattatcagatatttaaaaataaatatcacaatatagacattattaatatgtgtgttctattctacgtgcgacctcaacattcaatttttttaattca 7712078  T
Q  100 caca 103  Q
    ||||    
T  7712077 caca 7712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 38592188 - 38592260
Alignment:
Q  45 tactaatgtgtgtgttctattttatgtgggacccccaca-ctattttttcaattcacacaacattagatcaaa 116  Q
    ||||||| ||| |||||||||||||||| |||  ||| |  | |||||| |||||||||||||||||||||||    
T  38592188 tactaatatgtatgttctattttatgtgtgacttccatatttttttttttaattcacacaacattagatcaaa 38592260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 17963694 - 17963514
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  17963694 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattc 17963595  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17963594 acacatcattagatcaaagtatagttacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcaaacaa 17963514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 16835298 - 16835117
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaatt 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| ||||    
T  16835298 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttttaatt 16835199  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16835198 cacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 16835117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 6406996 - 6406824
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||||||||    
T  6406996 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcaggacccccacactctattttttcaattc 6406897  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgtt 170  Q
    |||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||| || |||||||||    
T  6406896 acacaacaatagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacagca-atcaatgtt 6406824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11533837 - 11533659
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  11533837 tatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtgggaccccacactttattttttcaattca 11533738  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||| |  ||||||||||||  ||||||||||||    
T  11533737 cacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaaca 11533659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11559347 - 11559169
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  11559347 tatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtgggaccccacactgtattttttcaattca 11559248  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||| |  ||||||||||||  ||||||||||||    
T  11559247 cacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaaca 11559169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 11569827 - 11569648
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11569827 tatcattatcaagtatttaaaattaaataccgcaatttaaacacttccaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattca 11569728  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
    ||||||||||||||||| |||||||| |||||||||||||||| ||||| |  | ||||||||||  ||||||||||||||    
T  11569727 cacaacattagatcaaagtataattacttggtgtttaatcttctaatttat-ttgcaacatcacactaatgttccaacaaa 11569648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 22694517 - 22694347
Alignment:
Q  3 tcattatcaagtatttaaaattaaataccacaatttaaacactacta-atgtgtgtgttctattttatgtgggacccccacactattttttcaattcaca 101  Q
    |||||||||||| |||| ||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22694517 tcattatcaagtttttataattaaatacggcaatttaaacact-ctagatgtgtgtgttctattttatgtgggacctccaaactattttttcaattcaca 22694419  T
Q  102 caacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 171  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22694418 caacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaatgttc 22694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 19994520 - 19994344
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactat-tttttcaattca 99  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||    
T  19994520 tatcataatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttacgtgggacccccacactctattttttaattca 19994421  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    || |||||| ||| ||| ||||||||  | |||||||||||||||||||||| |||||||||||| ||||| |||||    
T  19994420 cataacattcgattaaagtataattacctagtgtttaatcttccaatttttcttccaacatcacaccaatgatccaa 19994344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17600340 - 17600497
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||| ||||  |||||||||||||||    
T  17600340 tatcattatcaattatttaaaattaaataccacaatttaaac---actaatgtttgtgttctattttatgtgggaccctcacactctattttttcaattc 17600436  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaaca 157  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||| |||||||    
T  17600437 acacaacattagatcaaagtatgattacttggtgtttaatcttccaatttttcttccaaca 17600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 20747433 - 20747256
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||||||||||  |||||||||||||||    
T  20747433 tatcgttatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtaagttctattttatgtaggacccccacactctattttttcaattc 20747334  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    ||||||||||| |||||| |||||||| ||| ||||||||||||||||||| | || ||| | ||| |||||||||||    
T  20747333 acacaacattaaatcaaagtataattacttgatgtttaatcttccaattttccttcaaacttaacaccaatgttccaa 20747256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 12405496 - 12405334
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| || || | |||||  ||||||||| ||||     
T  12405496 tatcattatcaagtatttaaaattaagtacctcaatttaatcactactaatgtgtgtgttctattttatttgtgatctccacactctatttttttaatta 12405397  T
Q  99 acacaacattagatc-aaatataatta-ttggtgtttaatcttccaatttttcatccaacatc 159  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  12405396 acacaacattagatcaaaatataattagttgatgtttaatcttccaatttttcttccaacatc 12405334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33686779 - 33686606
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||  ||| |||||||||||| ||||| ||| ||||||||||||||||    
T  33686779 tatcattaccaagtatttaaaactaaataccacagtttaaacactactaatttgtaagttttattttatgtggaaccccacactctattttttcaattca 33686680  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 171  Q
    ||||| ||||||||||| |||||||| ||| |||||||||||||||||| |  ||||||||||||| |||||||    
T  33686679 cacaaaattagatcaaagtataattatttgatgtttaatcttccaatttattttccaacatcacattaatgttc 33686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 11428933 - 11429094
Alignment:
Q  16 tttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattcacacaacattagatc 113  Q
    |||||||||||| ||| || |||||| ||||| |||||||||| ||||||| ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  11428933 tttaaaattaaa-accgcagtttaaatactacaaatgtgtgtgctctatttaatgtgggacccccacactctattttttcaattcacgcaacattagatc 11429031  T
Q  114 aaa-tataattat-tggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    ||| ||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||    
T  11429032 aaagtataattatctggtgtttaatcttccaatttttcatccaaaagtacatcaatgttccaa 11429094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11613039 - 11612861
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |  ||| ||||||||||||||     
T  11613039 tatcattatcaagtatttaaaattaaataccgaaatttaaacactactaatgtgtgtgttttattttatgtgggacctcaacactctattttttcaattt 11612940  T
Q  99 acacaacattagatcaaa---tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    | | ||||||||||||||   |||||||| |  |||||||| || ||||||| | |||||||||||  |||||||||||||    
T  11612939 atataacattagatcaaaaagtataattacttatgtttaatttttcaattttccttccaacatcac--caatgttccaaca 11612861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 5 - 160
Target Start/End: Complemental strand, 2699247 - 2699087
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactat---tttttcaattcaca 101  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| |   |||| | |||||||    
T  2699247 attatctagtatttaaaattaaataccgcaatttaaacactactaatgtgtgaattctattttatgtgggacccccacactctatattttaccattcaca 2699148  T
Q  102 caacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatca 160  Q
    ||||||||||| ||| |||||||| ||| |||||||||||||||||| |  ||||||||||    
T  2699147 caacattagattaaagtataattacttgatgtttaatcttccaatttattttccaacatca 2699087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 19674734 - 19674874
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatttttt-caattcac 100  Q
    |||||||| | ||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19674734 atcattattaggtatttaaaattaaatatcattatttaaacactactgatgtgtgtgttctattttatgtcggacccccacactattttttccaattcac 19674833  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatctt 139  Q
    |||||| ||||||||| | |||||| |||||||||||||||    
T  19674834 acaacactagatcaaagtttaattatttggtgtttaatctt 19674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 12797914 - 12797772
Alignment:
Q  9 tcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtg----ttctattttatgtgggacccccaca--ctattttttcaattcacac 102  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||    |||||||||||||||||||| ||||  |||||||||||||||||||    
T  12797914 tcaagtatttaaaattaaataccactatttaaacactactagtgtgtgtgtgttttctattttatgtgggacccacacactctattttttcaattcacac 12797815  T
Q  103 aacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||| ||||||||| | |||||| |||||||||||||||||||    
T  12797814 aacactagatcaaagtctaattacttggtgtttaatcttccaa 12797772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 12689942 - 12690074
Alignment:
Q  14 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac-ccccacactattttttcaattcacacaacattagat 112  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||    
T  12689942 tatttaaaattaaataccgctatttaaacactactaatgtgtgtgttctattttatgtgggactccacactctattttttcaattcacacaacactagat 12690041  T
Q  113 caaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||| | |||| | |||||||||||| ||||||    
T  12690042 caaagtttaataatttggtgtttaattttccaa 12690074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25313609 - 25313492
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||| ||||  |||||||||||||||    
T  25313609 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgacccgcacactctattttttcaattc 25313510  T
Q  99 acacaacattagatcaaa 116  Q
    | | ||||||| ||||||    
T  25313509 ataaaacattatatcaaa 25313492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26201103 - 26200986
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||| ||||  |||||||||||||||    
T  26201103 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgacccgcacactctattttttcaattc 26201004  T
Q  99 acacaacattagatcaaa 116  Q
    | | ||||||| ||||||    
T  26201003 ataaaacattatatcaaa 26200986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22610471 - 22610612
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||  |||||  |||||||||||||      
T  22610471 tatcattatcaagtatttaaaattaaataccaaaatttaaacactactaatgtgtgtgttttattttatgtggaactgccacaatctattttttcaat-- 22610568  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttc 140  Q
    |||||||| ||||||||| | |||||| ||||| ||||||||||    
T  22610569 acacaacaatagatcaaagtctaattacttggtatttaatcttc 22610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5856945 - 5857023
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 79  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  5856945 tatcattatcaattatttaaaattaaataccgcaatttaaacactactaatgtgtatgttctagtttatgtgggacccc 5857023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17914552 - 17914670
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact---attttttcaatt 97  Q
    |||||| |||| |||||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||| ||||| | |||||    |||||| ||||    
T  17914552 tatcatcatcaggtatttaaaattaaataccgtaattaaaacactattaatgtgtgtgttccattttatgtaggacctcaacactctattttttttaatt 17914651  T
Q  98 cacacaacattagatcaaa 116  Q
     ||||||||||||||||||    
T  17914652 tacacaacattagatcaaa 17914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 5857039 - 5857096
Alignment:
Q  117 tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 174  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  5857039 tataattattggtgtttaatcttccaatttttcttccaacatcacactaatgttccaa 5857096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 14509941 - 14509982
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacacta 46  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  14509941 attattaagtatttaaaattaaataccacaatttaaacacta 14509982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 8069 - 8250
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  8069 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatcttatgtgggacccccacactctattttttcaattc 8168  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  8169 acacaacattaaatcaaagtataattacttggtgtttaatcttccaatttatcatccaacatcgcatcaatgttccaacaaa 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 40125030 - 40124851
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  40125030 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 40124931  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40124930 acacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 40124851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 15950707 - 15950528
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattca 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||||  ||||||||||||||||    
T  15950707 atcattatcaagtatttaaaattaaataccgcaatttaaacactattaatgtgtgtgttctattttatgtggcacctccacactctattttttcaattca 15950608  T
Q  100 cacaacattagatcaaa-tataatta-----ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 173  Q
    ||||||||||||||||| ||||||||     |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15950607 cacaacattagatcaaagtataattaattacttggtgtttagtcttccaatttttcatccaacatcacatcaatgttcca 15950528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28564431 - 28564258
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||  ||    
T  28564431 tatcattatcaaatatttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtggaacctccacactattttttcaatgtac 28564332  T
Q  101 acaacattagatcaaa-tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 173  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||| | || |||||||||    
T  28564331 acaacattagatcaaagtataatatttggtgtttaatcttccaatttttcttccaacattatatgaatgttcca 28564258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1808411 - 1808589
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |||  |||||||||||||||    
T  1808411 tatcattatcaaatatttaaaattaaataccgcaatttaaacacttctaatgtgtgtgttctattttatatgggaccccacactatattttttcaattca 1808510  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |  ||||||||||||  ||||||||||||    
T  1808511 cacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcacactaatgttccaaca 1808589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 38181418 - 38181253
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||  ||||||||||||||    
T  38181418 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggactctcacactttattttttcaattc 38181319  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcaca 162  Q
    |||||||||||||||||| |||||||| ||| |||||||| |||||||||||| ||||||| ||||    
T  38181318 acacaacattagatcaaagtataattacttgatgtttaatgttccaatttttcttccaacaacaca 38181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 28559252 - 28559074
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||| ||      
T  28559252 tatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctattttttccatgt 28559153  T
Q  99 acacaacattagatcaaa-tataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  28559152 acacaacattagattaaagtataatatttggtgtttaatcttccaatttttcttcgaacattacatcaattttccaaca 28559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18875521 - 18875357
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||||    
T  18875521 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgtgtgttctattgtatgtgggacccctacacactattttttcaattc 18875422  T
Q  99 acacaacattagatcaaa-tataattattg-gtgtttaatcttccaatttttcatccaacatcac 161  Q
    |||||||||||||||||| | |||||| |  || ||||||||||||||||||| |||||||||||    
T  18875421 acacaacattagatcaaaatttaattactcagtatttaatcttccaatttttcttccaacatcac 18875357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 44925057 - 44924878
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc--acactattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||  || ||| |||||||||||    
T  44925057 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgttttctattttatgtgggacctccaaactctaatttttcaattc 44924958  T
Q  99 acacaacattagatcaaa-tataatt-attggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||| ||||||||||| ||||||| ||| ||||||||||||||||||| |  ||||||||||||  ||||||||||||    
T  44924957 acacaagattagatcaaagtataattgattagtgtttaatcttccaatttattttccaacatcacactaatgttccaaca 44924878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2966545 - 2966710
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||    
T  2966545 tatcattattaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatatgggaccctcacactctattttttcaattc 2966644  T
Q  99 acacaacattagat-caaatataatta-ttggtgtttaatcttccaatttttcatccaacatcaca 162  Q
     || ||||||||||  ||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  2966645 ccataacattagataaaaatataattatttgatgtttaatcttccaatttttcttccaacatcaca 2966710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 1910083 - 1909904
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac--ccccacactattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||| |||||||||  || ||| |||||||||||||||    
T  1910083 tatcattatcaagtatttaaaattaaataccactgtttaaacactactaatgtgtgagctctatttcatgtgggacatccacactctattttttcaattc 1909984  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||| |  ||||||||||||    
T  1909983 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcatactaatgttccaaca 1909904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26780064 - 26780234
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactat-tttttcaattca 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||||    
T  26780064 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacacccacactctagttttcaattca 26780163  T
Q  100 cacaacattagatca-aatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatg 168  Q
    |||||||||| || | | |||||||| || ||||||||||||  |||||||| |||||||| |||||||||    
T  26780164 cacaacattaaattagagtataattacttagtgtttaatcttttaatttttcttccaacattacatcaatg 26780234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 33417490 - 33417650
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccc--ccacactattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| |||||||||||||||    
T  33417490 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacccatacactctattttttcaattc 33417589  T
Q  99 acacaacattagatcaaatataattattggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||                 |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33417590 acac-----------------aatacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 33417650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 7002623 - 7002784
Alignment:
Q  19 aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattagatcaaa 116  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||  ||||||||||||||||||||| | |||||||||    
T  7002623 aaaattaaataccacaatttaaacactactaatgtatgtattctattttatgtgagatccccacactctattttttcaattcacacaatactagatcaaa 7002722  T
Q  117 -tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
     | |||||| ||||||||||||||| ||| ||||| |  ||| ||||| ||||||||||||||    
T  7002723 gtctaattacttggtgtttaatctttcaa-ttttctttaaacttcacaccaatgttccaacaa 7002784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 17021243 - 17021341
Alignment:
Q  28 taccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattcacacaacattagatcaaa-tataatta 124  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17021243 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattcacacaacattagatcaaagtataatta 17021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 17551680 - 17551778
Alignment:
Q  28 taccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattcacacaacattagatcaaa-tataatta 124  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17551680 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattcacacaacattagatcaaagtataatta 17551778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 17027137 - 17027225
Alignment:
Q  84 ctattttttcaattcacacaacattagatcaaatataattattggtgtttaatcttccaa-tttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  17027137 ctattttttcaattcacacaacatta-----aatataattattggtgtttaatcttccaattttttcatccaacatcacattaatgttccaaca 17027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 17557629 - 17557717
Alignment:
Q  84 ctattttttcaattcacacaacattagatcaaatataattattggtgtttaatcttccaa-tttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||||||||||||     ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  17557629 ctattttttcaattcacacaacatta-----aatataattattggtgtttaatcttccaattttttcatccaacatcacattaatgttccaaca 17557717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17953281 - 17953166
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||| |||| | ||||||||| ||||||||| ||| |||||||||| |||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  17953281 tatcataatcaggcatttaaaataaaataccactatt-aaacactactgatgtgtgtgttctattttttgtggtaccccacactctattttttcaattca 17953183  T
Q  100 cacaacattagatcaaa 116  Q
    ||||||| |||||||||    
T  17953182 cacaacactagatcaaa 17953166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24672455 - 24672364
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatttttt 92  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| | || || ||| |||||||||| |||||||||||| |||||||||    
T  24672455 tatcattattaagtatttacaattaaatatcacaatttaaacactattgatctgcgtgctctattttatttgggacccccactctatttttt 24672364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23547740 - 23547568
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||     | |||  | ||||||||| |||||||| |||||| | |  |||||||||| ||||    
T  23547740 tatcattatcaagtatttaaaattaaataccgcaatttaa-----attaa--tatgtgttctaatttatgtgagaccccgatattctattttttcgattc 23547648  T
Q  99 acacaacattaga-tcaaatataattatt-ggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    |  |||||||||| | |||||||||||||   ||||||||||| ||||||||| | |||||| | | |||||||||||||    
T  23547647 atgcaacattagattaaaatataattattcaatgtttaatctttcaatttttctttcaacattaaaccaatgttccaaca 23547568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 31440200 - 31440254
Alignment:
Q  13 gtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatttt 67  Q
    ||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  31440200 gtatttaaaattaaatatcacaatttaaacactactaatgattgtgttctatttt 31440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 17798029 - 17798124
Alignment:
Q  21 aattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactat--tttttcaattcacacaacattagatcaaa 116  Q
    ||||||||| |||||||| |||| ||||||| ||||   |||| ||||||||| ||  |||||||||  ||||||||||||||||||| |||||||||    
T  17798029 aattaaatagcacaatttgaacattactaatatgtgc--tctaatttatgtggtacttccacactatattttttcaattcacacaacactagatcaaa 17798124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33100548 - 33100623
Alignment:
Q  1 tatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc 77  Q
    |||||||||||||||||| ||||||||||||  ||||||||| | || |||  ||||| |||||||||||||||||||    
T  33100548 tatcattatcaagtatttaaaaattaaatactgcaatttaaagattattaa--tgtgtattctattttatgtgggacc 33100623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 17027105 - 17027136
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaat 36  Q
    ||||||||||||||||||||||||||||||||    
T  17027105 attatcaagtatttaaaattaaataccacaat 17027136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 36
Target Start/End: Original strand, 17557597 - 17557628
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaat 36  Q
    ||||||||||||||||||||||||||||||||    
T  17557597 attatcaagtatttaaaattaaataccacaat 17557628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 28859363 - 28859422
Alignment:
Q  14 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtggga 75  Q
    |||||||| |||||||  || ||||||| ||||||| | |||||||||||||||||||||||    
T  28859363 tatttaaagttaaata--actatttaaatactactattatgtgtgttctattttatgtggga 28859422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 5884858 - 5884956
Alignment:
Q  1 tatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaatt 97  Q
    ||||||||||  |||||||||| ||||||| ||  |||||||||||| |||  |||||||||||||| |||||| ||| | ||||  |||||||||||||    
T  5884858 tatcattatcccgtatttaaaaattaaatatca--atttaaacactattaa--tgtgtgttctatttcatgtggaacctctacactttattttttcaatt 5884953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4931183 - 4931362
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  4931183 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccccacactctattttttcaattc 4931282  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4931283 acacaacattatatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaaca 4931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26342167 - 26342344
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26342167 tatcattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttcaattcac 26342266  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    | || |||| || ||| |||||||| ||| | |||||||||| |||||||||||||||||||||| ||||||||||||    
T  26342267 ataatattaaattaaagtataattacttgatatttaatcttcgaatttttcatccaacatcacattaatgttccaaca 26342344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3046534 - 3046712
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattc 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  3046534 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtggga-ccccacacttaattttttcaattc 3046632  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||| ||| |||||| |||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||| |||||    
T  3046633 acacaactttatatcaaattataattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgtttcaaca 3046712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 12256982 - 12257161
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| |    
T  12256982 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgcgtgtgttctattttatgtgggaccccacactctattttttcaattta 12257081  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||| |||||| |||||||| |||||| |||||||||||| || |  |||||||||||| ||||||||||||||    
T  12257082 cacaacattaaatcaaagtataattatttggtgattaatcttccaaattctattccaacatcacaccaatgttccaacaa 12257161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 21672165 - 21672345
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtggga-cccccacactattttttcaattca 99  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| ||| ||  ||||||||||||||||    
T  21672165 tatcattatcaagtatataaaattaaataccgcaatttaaacagtactaatgtgtgtgctctattttatgtgggatcccacattctattttttcaattca 21672264  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaaa 178  Q
    |||||| |||||||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  21672265 cacaacgttagatcaaagtataattacttggtgtttattcttccaatttttcttccaacatcacaccaatgttccaacaaa 21672345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3880928 - 3881110
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactacta---atgtgtgtgttctattttatgtgggacccccaca--ctattttttcaa 95  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||   ||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  3880928 tatcattatcaagtatttaaaattaaatatcacaatttaagcactactaatgatgtgtgtgttctattttatgtgagacccccacactctattttttcaa 3881027  T
Q  96 ttcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||| ||| ||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||| |||| | ||||||||    
T  3881028 ttcacgcaatattagatcaaagtataattacttggtatttaatcttccaatttttcttccaacatcagatcactattccaaca 3881110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 42625719 - 42625565
Alignment:
Q  1 tatcattatcaagtatttaaaattaaatac-----cacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttc 93  Q
    ||||||||||||||||||||||||||||||     | |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  42625719 tatcattatcaagtatttaaaattaaatactgcaccgcaatttaaacactactaatgtgtgagttctattttatgtgggacccccacactctattttttc 42625620  T
Q  94 aattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaattt 146  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  42625619 aattcacataacattagatcaaagtataattacttggtgtttaatcttccaattt 42625565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 26286293 - 26286146
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatt----ttttcaatt 97  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||    
T  26286293 atcattatcagttatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttttttcaatt 26286194  T
Q  98 cacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
     | |||||| ||||||||| | |||||| |||||||||||||||||||    
T  26286193 tatacaacactagatcaaagtttaattacttggtgtttaatcttccaa 26286146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 44508401 - 44508261
Alignment:
Q  32 acaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattcacacaacattagatcaaa-tataatta-ttg 127  Q
    |||||||||||||||||||| ||||||||||||||||| |||||  ||||||||  ||||||||||||||||||| ||||||||||| |||||||| |||    
T  44508401 acaatttaaacactactaatatgtgtgttctattttatatgggattcccacactctattttttcaattcacacaatattagatcaaagtataattacttg 44508302  T
Q  128 gtgtttaatcttccaatttttcatccaacatcacatcaatg 168  Q
     | ||||||||||||||||||||||||||||||||||||||    
T  44508301 atatttaatcttccaatttttcatccaacatcacatcaatg 44508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 177
Target Start/End: Original strand, 2595774 - 2595910
Alignment:
Q  45 tactaatgtgtgtgttctattttatgtgggacccccacact--attttttcaattcacacaacattagatcaaa-tataattatt-ggtgtttaatcttc 140  Q
    |||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||    
T  2595774 tactaatgtgtgtgttctattttatgtgggatacccacactctattttttcaattcacacaacattagattaaagtgtaattatttggtgtttaatcttc 2595873  T
Q  141 caatttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||||||||| |||||||| ||||||||||||| ||||    
T  2595874 caatttttcttccaacattacatcaatgttcctacaa 2595910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 10392221 - 10392043
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac----tattttttcaattcac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||  |||||||||||||||||||||| ||| |||||    | ||||||||||||||    
T  10392221 attatcaagtatttaaaattaaataccgcaatttaaacactgataacatgtgtgttctattttatgtggggccctcacactctattttttttcaattcac 10392122  T
Q  101 acaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||| ||||||||| |||||||| ||||||||||||||| | ||||| |  ||||| ||||| ||||||||||||||    
T  10392121 acaacactagatcaaagtataattacttggtgtttaatctttcgattttcctcccaacttcacaccaatgttccaacaa 10392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 13313449 - 13313345
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac--ccccacactattttttcaattca 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||    
T  13313449 atcattatcaagtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacatccacactctattttttcaattca 13313350  T
Q  100 cacaa 104  Q
    |||||    
T  13313349 cacaa 13313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12181888 - 12181804
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact 85  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12181888 tatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacact 12181804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 23247694 - 23247554
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc-cccacactattttttcaattca 99  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||| ||||||||   ||| ||||||||||||||||    
T  23247694 tatcattatcaagtatttaaaattaaataccgtaatttaaacactactaatgtttgttttctattttaggtgggaccatacactctattttttcaattca 23247595  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatct 138  Q
    || |||||||||||||| |||||||| ||||||||||||||    
T  23247594 cataacattagatcaaagtataattacttggtgtttaatct 23247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 12802295 - 12802422
Alignment:
Q  53 tgtgtgttctattttatgtgggacccc-cacactattttttcaattcacacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttc 149  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |     
T  12802295 tgtgagttctattttatgtgggaccccacactctattttttcaattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttatt 12802394  T
Q  150 atccaacatcacatcaatgttccaacaa 177  Q
     ||||||||||||  |||||||||||||    
T  12802395 ttccaacatcacactaatgttccaacaa 12802422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 4580426 - 4580542
Alignment:
Q  2 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattca 99  Q
    |||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||| ||||||    
T  4580426 atcattatcaggtatttagaattaaataccactatataaacactactaatgtgtgtgttctattttatatgggacccctacactctatttttttaattca 4580525  T
Q  100 cacaacattagatcaaa 116  Q
    ||||||| || ||||||    
T  4580526 cacaacactaaatcaaa 4580542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 136
Target Start/End: Complemental strand, 23151804 - 23151683
Alignment:
Q  21 aattaaataccacaatttaaacactactaat--gtgtgtgttctattttatgtgggacccccacact--attttttcaattcacacaacattagatcaaa 116  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||    
T  23151804 aattaaatatctcaatttaaacactactaatatgtgtgtgttctattttatgcgggactcccacactttattttttcaattcacacaacattagatcaaa 23151705  T
Q  117 -tataatta-ttggtgtttaat 136  Q
     |||||||| ||| ||||||||    
T  23151704 gtataattacttgatgtttaat 23151683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 30259238 - 30259368
Alignment:
Q  17 ttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattcacacaacattagatca 114  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||||||||||||  | ||||||  |||||||||||||| ||| |||| |||||||    
T  30259238 ttaaaattaaatatcactatttaaacactactaatgtatgtgatctattttatgtggatctcccacactctattttttcaatttacaaaacactagatca 30259337  T
Q  115 aa-tataatta-ttggtgtttaatcttccaa 143  Q
    || | |||||| ||||| |||||||||||||    
T  30259338 aagtttaattacttggtatttaatcttccaa 30259368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15973681 - 15973800
Alignment:
Q  1 tatcattatcaagtatttaaaatt--aaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacac--tattttttcaat 96  Q
    ||||||||||  |||||||||| |  |||||||| ||| |||| |||||||||||||||||||||||||||||| |||| ||||||  ||||||||| ||    
T  15973681 tatcattatccggtatttaaaaattaaaataccataatataaatactactaatgtgtgtgttctattttatgtgcgacctccacactttattttttcgat 15973780  T
Q  97 tcacacaacattagatcaaa 116  Q
    |||||||||| ||| |||||    
T  15973781 tcacacaacactagctcaaa 15973800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10387486 - 10387410
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaaca-ctactaatgtgtgtgttctattttatgtgggac 76  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||    
T  10387486 tatcattatcaaatatttaaaattaaataccacaatttaaacacctgctaatatgtgtgttctattttatatgggac 10387410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 9815008 - 9814929
Alignment:
Q  5 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca 83  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||| |||||||    
T  9815008 attatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgttggatccccaca 9814929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 10716933 - 10716866
Alignment:
Q  5 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 71  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  10716933 attatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgt 10716866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12800350 - 12800405
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtg 56  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  12800350 tatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtg 12800405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 6590144 - 6590099
Alignment:
Q  6 ttatcaagtatttaaaattaaataccacaatttaaacactactaat 51  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  6590144 ttatcaagtatttaaaattaaataatacaatttaaacactactaat 6590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27246682 - 27246608
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacc 77  Q
    |||||||||||||||||||  | |||||| | |||||||||||||| |||  |||||||||||||||||||| ||||    
T  27246682 tatcattatcaagtatttatgaataaatagcgcaatttaaacactattaa--tgtgtgttctattttatgtgagacc 27246608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8269260 - 8269312
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgt 53  Q
    ||||||||||||||||||||||||||||| | || |||||||||| |||||||    
T  8269260 tatcattatcaagtatttaaaattaaatatcgcagtttaaacacttctaatgt 8269312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16373308 - 16373364
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgt 57  Q
    |||| |||||| |||||||||||||| |||  |||||||||||||||||||||||||    
T  16373308 tatcgttatcaggtatttaaaattaactactgcaatttaaacactactaatgtgtgt 16373364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44508465 - 44508427
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaattta 39  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  44508465 tatcattatcaaatatttaaaattaaataccacaattta 44508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30137 - 30313
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||    
T  30137 tatcattatcatgtagttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccctacactctattttttcaattc 30236  T
Q  99 acacaacattagatc-aaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 173  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30237 acacaacattagatcaaaatataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 30313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 26405 - 26547
Alignment:
Q  5 attatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggac--ccccacactattttttcaattcacac 102  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||    
T  26405 attatcaggtatttaaaattaaatacctctatttaaacactactaatgtgtgtgttctattttatgtgggacctccgcactctattttttcaattcacac 26504  T
Q  103 aacattagatcaaa-tataatta-ttggtgtttaatcttccaa 143  Q
    |||  ||||| ||| | |||||| |||||||||||||||||||    
T  26505 aactctagatgaaagtttaattatttggtgtttaatcttccaa 26547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 130; Significance: 3e-67; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 5024 - 5204
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctattttttcaattc 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||    
T  5024 tatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgagtgttctattttatgcgggacccccacactctattttttcaattc 5123  T
Q  99 acacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacaa 177  Q
    |||||||||||||||||| |||| | | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5124 acacaacattagatcaaagtatattaacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaacaa 5204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 443075 - 442897
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  443075 tatcattatcaaatatttaaaattaaataccacaatttaaacccaactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattca 442976  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||| |  ||||||||||||  ||| ||||||||    
T  442975 cacaacattagatcaaagtataattatttaatgtttaatcttccaatttattttccaacatcacagtaatattccaaca 442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 155181 - 155288
Alignment:
Q  5 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccaca--ctatt---ttttcaattc 98  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||| |||| | | ||||||||||| ||||| || ||||  |||||   ||||||||||    
T  155181 attatcaggtatttaaaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactctattttattttcaattc 155280  T
Q  99 acacaaca 106  Q
    ||||||||    
T  155281 acacaaca 155288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 6192 - 6373
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| |  ||| |||||||||||||||    
T  6192 tatcattatcaagtatttaaaattaaataccacaatttaaacaccactaatgtgtgtattctatcttatgtgggacctcaacactctattttttcaattc 6291  T
Q  99 acacaacattagatc-aaatataatta-ttggtgtttaatcttccaa-tttttcatccaacatcacatcaatgttccaacaa 177  Q
    ||| ||||||||||| || |||||||| |||||||||||| ||  || |||||| ||||||||| || ||||||||||||||    
T  6292 acataacattagatcgaagtataattacttggtgtttaattttataattttttcttccaacatcgcaccaatgttccaacaa 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4932 - 5108
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||  | |||||| |||||||||||| ||||| |||  |||||||||||||||    
T  4932 tatcattatcaagtatttaaaattaaataccgcaacttaaacacaactaa--tatgtgttatattttatgtggtaccccacactatattttttcaattca 5029  T
Q  100 cacaacattagatcaaa-tataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 176  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||||||| |||||||||||| ||||| |||||||    
T  5030 cacaacattagatcaaagtataattacgtggtgtttaatctttcaatttttcttccaacatcacaccaatgatccaaca 5108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36082 - 36257
Alignment:
Q  1 tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc-cacactattttttcaattca 99  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||||| ||| ||||||||||||||||| |||| ||| ||||||||||||||||    
T  36082 tatcattatcaaatatttaaaattaaataccgcagtttaaacactactaatgcgtgagttctattttatgtggggccccacactctattttttcaattca 36181  T
Q  100 cacaacattagatc-aaatataatta-ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 173  Q
     ||||||||||||| ||||||||||| ||||||||||||||| |||||| |  | ||||||||||  |||||||||    
T  36182 tacaacattagatcaaaatataattatttggtgtttaatctttcaatttatttttcaacatcacactaatgttcca 36257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 65013 - 64885
Alignment:
Q  18 taaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc--cacactattttttcaattcacacaacattagatcaa 115  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||| ||||||||    
T  65013 taaatttaaataccactatttaaagactactaatgtgtgtgttctattttatgtgggacccctacactctatttttttaattcacacaacactagatcaa 64914  T
Q  116 a-tataattattggtgtttaatcttccaa 143  Q
    | | |||||| | ||||||||||||||||    
T  64913 agtttaattacttgtgtttaatcttccaa 64885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University