View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13864_high_25 (Length: 420)
Name: NF13864_high_25
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_high_25 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 26242378 - 26242774
Alignment:
| Q |
6 |
actgagatgaagtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaattt |
105 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
26242378 |
actgatatgatgtatccttggactgtggaatcagctgcaaaactaaatattccaaggattcacttttgcagctcaagctacttctccgactgtggaattt |
26242477 |
T |
|
| Q |
106 |
attttgttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
26242478 |
attttgttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtcttca |
26242577 |
T |
|
| Q |
206 |
acttagtgactgggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagtttt |
305 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26242578 |
actttgtgactgggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagtttt |
26242677 |
T |
|
| Q |
306 |
catgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26242678 |
catgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcctgggctaacaaggatg |
26242774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 12 - 402
Target Start/End: Original strand, 26250832 - 26251222
Alignment:
| Q |
12 |
atgaagtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttg |
111 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
26250832 |
atgaagtatccttggactgtagaatcagctgcaaaactaaacattccaaggatttacttttgcagctcaagctacttctccgaatgtgcaatttattttg |
26250931 |
T |
|
| Q |
112 |
ttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttag |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | |
|
|
| T |
26250932 |
ttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacaattgagatgacccgtcagcaactttg |
26251031 |
T |
|
| Q |
212 |
tgactgggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaa |
311 |
Q |
| |
|
||| |||||| ||||| ||||| ||||| ||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26251032 |
tgattgggaattggaaaacaatgctatgaaggccatttttgaaccaatgtatgaatcagcagaaagaagctatgggtcactatacaacagttttcatgaa |
26251131 |
T |
|
| Q |
312 |
cttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
||||||| |||||| ||||| ||| |||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
26251132 |
cttgaaaatgattacgagaagctttgtaaaagtacaattggaatcaaatcatggagtgtcggaccagtttctgcctgggctaacaaggatg |
26251222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 12 - 402
Target Start/End: Original strand, 26297432 - 26297822
Alignment:
| Q |
12 |
atgaagtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttg |
111 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||| |
|
|
| T |
26297432 |
atgaaatacccttggactgtggaatcagctgcaaaactaaacattccaaggattgacttttacagctcaagctacttctcctattgtgcaatttattttg |
26297531 |
T |
|
| Q |
112 |
ttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttag |
211 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |
|
|
| T |
26297532 |
ttagaaaatataaaccccattataatttagtttctgaaacacagaaatttacaattccttgtttacctcataccattgagatgacacgtctgcagcttca |
26297631 |
T |
|
| Q |
212 |
tgactgggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaa |
311 |
Q |
| |
|
| | ||||||||||||| ||| | ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26297632 |
taattgggaaagggaaaacaacgctatgacggccatttttgaaccaatgtatgaatcagcggaaagaagctatgggtcactatacaacagttttcatgaa |
26297731 |
T |
|
| Q |
312 |
cttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26297732 |
cttgaaagtgattatgagaaactttttaaaactacaatcggaatcaagtcatggagtgtcggaccagtttcagcctgggctaacaaggatg |
26297822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 6 - 402
Target Start/End: Original strand, 26191246 - 26191642
Alignment:
| Q |
6 |
actgagatgaagtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaattt |
105 |
Q |
| |
|
||||| |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || |
|
|
| T |
26191246 |
actgatatgatgtatccttggacagtggaagcagctgcaaaactaaacattccaaggattcacttttatagctcaagttacttctccagctgtgcctttc |
26191345 |
T |
|
| Q |
106 |
attttgttagaaaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgca |
205 |
Q |
| |
|
||||| | | ||||||| || ||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||| |||||| |
|
|
| T |
26191346 |
attttatcatgaaatataggcctcatgataatttagtttctgatacacagaaatttactattcctagttttcctcataccattgagatgacccctctgca |
26191445 |
T |
|
| Q |
206 |
acttagtgactgggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagtttt |
305 |
Q |
| |
|
|| ||| ||| |||||||| ||| | || ||| ||||||||||| ||||| ||||| ||||| ||||||||| |||||||||| |||||| |
|
|
| T |
26191446 |
gattcctgattggttaagggaaaagaatcctgccacagcctattttgaaccaatttatgaatcagaggaaaaaagctatggcacactatacaatagtttt |
26191545 |
T |
|
| Q |
306 |
catgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
|||||||| |||||||| |||||||| ||| |||| ||||||| || |||||||| |||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
26191546 |
catgaactagaaagtgaatatgagaaactttgtaatactacaagggggatcaaatcttggagtgtaggaccagtttcagcttgggctaaaaaggatg |
26191642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 26223525 - 26223703
Alignment:
| Q |
18 |
tatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaa |
117 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| || ||||||||||||| |
|
|
| T |
26223525 |
tatccttggacagttgaatcagctgcaaaactaaacattccaaggatttacttttacagctcaagctacttctccaattgtgcaagctattttgttagaa |
26223624 |
T |
|
| Q |
118 |
aatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgac |
196 |
Q |
| |
|
| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
26223625 |
agtatagacctcatgataatttagtttctgatacacagaaatttactgttccttgtttgcctcatacaattgagatgac |
26223703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 26203887 - 26204065
Alignment:
| Q |
18 |
tatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaa |
117 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||| | ||||||||||||| |
|
|
| T |
26203887 |
tatccttggacagttgaatcagctgcaaaactaaacattccaaggatttacttttacagctcaagctacttctccaattgtgcgagctattttgttagaa |
26203986 |
T |
|
| Q |
118 |
aatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgac |
196 |
Q |
| |
|
| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |
|
|
| T |
26203987 |
agtatagacctcatgataatttagtttctgatacacagaaatttaccgttccttgtttgcctcatacaattgagatgac |
26204065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 17 - 402
Target Start/End: Original strand, 26179075 - 26179460
Alignment:
| Q |
17 |
gtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttaga |
116 |
Q |
| |
|
|||||| ||||| |||||| |||||||||||||| |||||||| ||||| | ||||||||||||||||||||| | |||| | |||| | | |
|
|
| T |
26179075 |
gtatccgtggacagtggaagcagctgcaaaactaggtattccaagaattcattattacagctcaagctacttctccaattgtgttgctcatttgatcatg |
26179174 |
T |
|
| Q |
117 |
aaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttagtgact |
216 |
Q |
| |
|
|| |||| ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||||||| ||| | |
|
|
| T |
26179175 |
aagtatagaccaaatgataatttagtttctgatacacagaaatttacaattccttgttttcctcatacaattgagatgactcctctgcaacttcctgatt |
26179274 |
T |
|
| Q |
217 |
gggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaacttga |
316 |
Q |
| |
|
|| | | || ||| | | ||| ||||||||||| | || ||||| | ||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
26179275 |
ggttacatgcaaagaatcctgccgctgcctattttgaaccaatgtttgaatcagagaaaagaagttatggaacactatacaatagttttcatgaacttga |
26179374 |
T |
|
| Q |
317 |
aagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
|||||||||||| || | ||||| |||||||| || |||||| | |||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
26179375 |
aagtgattatgaaaaattaagtaacactacaatggggatcaaaacttggagtgtaggaccagtttcagcttggactaacaaggatg |
26179460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 402
Target Start/End: Complemental strand, 19103702 - 19103317
Alignment:
| Q |
17 |
gtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttaga |
116 |
Q |
| |
|
|||| ||||||| || ||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||| | ||||| | | |
|
|
| T |
19103702 |
gtatgcttggaccgtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgttttccattttatcatg |
19103603 |
T |
|
| Q |
117 |
aaatataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttagtgact |
216 |
Q |
| |
|
|| |||| ||| ||| ||||||||||||||||||| ||||||||||| ||||| |||| |||||||| |||||||||| | |||||| ||| ||| | |
|
|
| T |
19103602 |
aagtatagacctcataataatttagtttctgatacgcagaaatttacggttcctggtttgcctcataccattgagatgactcctctgcagcttcctgatt |
19103503 |
T |
|
| Q |
217 |
gggaaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaacttga |
316 |
Q |
| |
|
|| ||| || ||| | | || ||| ||||||||||| | || ||||| | ||||||| ||||| |||||||||| |||||||||||||| || |
|
|
| T |
19103502 |
ggttaagaacaaagaattctgtcactgcctattttgaaccaatgtttgaatcagagaaaagaagttatggaacactatacaatagttttcatgaactgga |
19103403 |
T |
|
| Q |
317 |
aagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
||||||||||| || ||| |||| |||||| | || |||||||| ||| |||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
19103402 |
aagtgattatgtaaaacttggtaagactacattggggatcaaatcttggtgtgtaggaccagtttcagctagggctaacaaggatg |
19103317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 402
Target Start/End: Original strand, 26128562 - 26128944
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaaaa |
119 |
Q |
| |
|
||||||||| || ||| |||||||||||||| |||||||| ||||| | | ||||||||||||||||||| |||||| | ||||| | | || |
|
|
| T |
26128562 |
tccttggacggtcgaagcagctgcaaaactaggtattccaagaattcattataacagctcaagctacttctccaactgtgcagaacattttatcatgaag |
26128661 |
T |
|
| Q |
120 |
tataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttagtgactggg |
219 |
Q |
| |
|
|||| ||| || |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| | |||||| ||| | ||| |
|
|
| T |
26128662 |
tatagaccaaatgataatttagtttctgatacacagaaatttacaattcctggtttgcctcatacaattgagatgactcctctgcagcttcctttttgga |
26128761 |
T |
|
| Q |
220 |
aaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaacttgaaag |
319 |
Q |
| |
|
|||| | | | || || ||| ||||||| ||| ||||| |||| | ||||||| ||||| |||||| ||| |||||||||||||| ||||| |
|
|
| T |
26128762 |
taaggtcacagagttttgccactgcctattttgaagcaatttatgaatcacagaaaagaagttatggaacactatgcaatagttttcatgaactggaaag |
26128861 |
T |
|
| Q |
320 |
tgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
||||||||| || || |||| ||||| | || |||||||| |||||||| |||||||||||| | |||||||||||||||| |
|
|
| T |
26128862 |
tgattatgaaaacatttgtaacactaccttggggatcaaatcttggagtgtaggaccagtttcatcatgggctaacaaggatg |
26128944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 402
Target Start/End: Original strand, 26155198 - 26155580
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaaaa |
119 |
Q |
| |
|
||||||||| || ||| ||||||||| |||| |||||||| ||||| | ||||||||||||||||||||| | |||| | |||| | | || |
|
|
| T |
26155198 |
tccttggacggtcgaagcagctgcaagactaggtattccaagaattcattattacagctcaagctacttctccaattgtgctgctcatttgatcatgaag |
26155297 |
T |
|
| Q |
120 |
tataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttagtgactggg |
219 |
Q |
| |
|
|||| ||| ||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||| ||||| | |||||| ||| | ||| |
|
|
| T |
26155298 |
tatagacctcatgataatttagtttctgatacacacaaatttacaattcctggtttgcctcatacaattgaaatgactcctctgcagcttcctttttgga |
26155397 |
T |
|
| Q |
220 |
aaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaacttgaaag |
319 |
Q |
| |
|
|||| | | | || || ||| ||||||| ||| ||||| |||| | ||||||| ||||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
26155398 |
taaggacacagagttttgccactgcctattttgaagcaatttatgaatcacagaaaagaagttatggaacactatacaatagttttcatgaactggaaag |
26155497 |
T |
|
| Q |
320 |
tgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaaggatg |
402 |
Q |
| |
|
||||||||| || |||||||| ||||| || || |||||| | |||||||| |||||||||||| | |||||||||||||||| |
|
|
| T |
26155498 |
tgattatgaaaaacttagtaacactaccatggggatcaaaacttggagtgtaggaccagtttcatcatgggctaacaaggatg |
26155580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 26302066 - 26302175
Alignment:
| Q |
289 |
cactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttg |
388 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| ||| |||||| |||| ||||| ||||||||||| |||| ||| ||||||||||| | ||| |
|
|
| T |
26302066 |
cactatacaatagttttcatgaacttgaaagtgattatgtgaaacttagtcaaacaacaatgggaatcaaatcttggaatgtaggaccagtttctgtttg |
26302165 |
T |
|
| Q |
389 |
ggctaacaag |
398 |
Q |
| |
|
|||||||||| |
|
|
| T |
26302166 |
ggctaacaag |
26302175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 26204143 - 26204254
Alignment:
| Q |
274 |
aaagaagctatgggtcactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcgg |
373 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||| || |||||||| |||||| | || |
|
|
| T |
26204143 |
aaagaagctttggaacactatacaatagttttcatgaactagaaagtgattatgagaaacttggtaaaactacaatagggatcaaatcttggagtatagg |
26204242 |
T |
|
| Q |
374 |
accagtttcagc |
385 |
Q |
| |
|
||| |||||||| |
|
|
| T |
26204243 |
accggtttcagc |
26204254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 385
Target Start/End: Original strand, 26223781 - 26223892
Alignment:
| Q |
274 |
aaagaagctatgggtcactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcgg |
373 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||| || |||||||| |||||| | || |
|
|
| T |
26223781 |
aaagaagctttggaacactatacaatagttttcatgaactagaaagtgattatgagaaacttggtaaaactacaatagggatcaaatcttggagtatagg |
26223880 |
T |
|
| Q |
374 |
accagtttcagc |
385 |
Q |
| |
|
||| |||||||| |
|
|
| T |
26223881 |
accggtttcagc |
26223892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 26087776 - 26087952
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaaaa |
119 |
Q |
| |
|
||||||||| || ||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||| | ||||| | | || |
|
|
| T |
26087776 |
tccttggacggtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgcagaacattttatcatgaag |
26087875 |
T |
|
| Q |
120 |
tataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgac |
196 |
Q |
| |
|
|||| ||| ||| ||||||| ||||||||||||||||||||||| ||||| | || |||||| || |||||||||| |
|
|
| T |
26087876 |
tatagacctcatgataatttggtttctgatacacagaaatttactgttcctggattccctcattcaattgagatgac |
26087952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 26111564 - 26111740
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaaaa |
119 |
Q |
| |
|
||||||||| || ||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |||||| | ||||| | | || |
|
|
| T |
26111564 |
tccttggacggtcgaagcagctgcaaaactaggtattccaagaattcactattacagctcaagctacttctccaactgtgcagaacattttatcatgaag |
26111663 |
T |
|
| Q |
120 |
tataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgac |
196 |
Q |
| |
|
|||| ||| ||| ||||||| ||||||||||||||||||||||| ||||| | || |||||| || |||||||||| |
|
|
| T |
26111664 |
tatagacctcatgataatttggtttctgatacacagaaatttactgttcctggattccctcattcaattgagatgac |
26111740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 26088046 - 26088155
Alignment:
| Q |
289 |
cactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttg |
388 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| || ||| | | |||||||| || |||||||| |||||||| || |||||||||||||| |
|
|
| T |
26088046 |
cactatacaatagttttcatgaactggaaagtgattatgaaaaacttggaagcactacaatggggatcaaatcttggagtgtagggccagtttcagcttg |
26088145 |
T |
|
| Q |
389 |
ggctaacaag |
398 |
Q |
| |
|
| | |||||| |
|
|
| T |
26088146 |
gaccaacaag |
26088155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 398
Target Start/End: Original strand, 26111834 - 26111943
Alignment:
| Q |
289 |
cactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttg |
388 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| || ||| | | |||||||| || |||||||| |||||||| || |||||||||||||| |
|
|
| T |
26111834 |
cactatacaatagttttcatgaactggaaagtgattatgaaaaacttggaagcactacaatggggatcaaatcttggagtgtagggccagtttcagcttg |
26111933 |
T |
|
| Q |
389 |
ggctaacaag |
398 |
Q |
| |
|
| | |||||| |
|
|
| T |
26111934 |
gaccaacaag |
26111943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 26186506 - 26186619
Alignment:
| Q |
289 |
cactatacaacagttttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttg |
388 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||| | || |||||||| |||| | || ||||||||||||||||| |||||||||||| | | |
|
|
| T |
26186506 |
cactatacaatagttttcatgaactggagagtgattataaaaaacttagtaacactatcttggggatcaaatcatggagtgtaggaccagtttcatcatt |
26186605 |
T |
|
| Q |
389 |
ggctaacaaggatg |
402 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
26186606 |
ggctaacaaggatg |
26186619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 26301803 - 26301877
Alignment:
| Q |
17 |
gtatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctc |
91 |
Q |
| |
|
|||||||||||| || ||||||||| ||||||| |||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
26301803 |
gtatccttggacagttgaatcagcttcaaaactgaacattccgaggatgtacttttacagctcaagctacttctc |
26301877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 26207428 - 26207501
Alignment:
| Q |
18 |
tatccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctc |
91 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
26207428 |
tatccatggacagtggaatcagctgcaaaactcggcattccaaggctttactattacagctcaagctacttctc |
26207501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 26301904 - 26301966
Alignment:
| Q |
133 |
ataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatga |
195 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||| || |||| ||||||||| ||||||||| |
|
|
| T |
26301904 |
ataatttggtttctgatacacagaaatttactattgctggtttgcctcatacaattgagatga |
26301966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 26227274 - 26227356
Alignment:
| Q |
303 |
tttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagc |
385 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||| || | ||||| || |||||| |||||||||| |||||||||||||| |
|
|
| T |
26227274 |
tttcacgaacttgaaggtgattatgagaatctttacaagagcacaatggggatcaaagcatggagtgtaggaccagtttcagc |
26227356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 399
Target Start/End: Original strand, 26207713 - 26207809
Alignment:
| Q |
303 |
tttcatgaacttgaaagtgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaagg |
399 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||| || | ||||| || |||||| ||||||| || |||||||||||||| |||| ||| |||| |
|
|
| T |
26207713 |
tttcacgaacttgaaggtgattatgagaatctttacaagagcacaatggggatcaaagcatggagcgtaggaccagtttcagcatgggttaaaaagg |
26207809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 26226965 - 26227036
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctc |
91 |
Q |
| |
|
||||||||| ||| ||||||||||||||| |||||| ||| || ||| ||||||||||||||||||||| |
|
|
| T |
26226965 |
tccttggacagtgcaatcagctgcaaaacgcggcattcctaggctttactattacagctcaagctacttctc |
26227036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 399
Target Start/End: Original strand, 44903245 - 44903624
Alignment:
| Q |
20 |
tccttggactgtggaatcagctgcaaaactaaacattccaaggattcacttttacagctcaagctacttctctgactgtggaatttattttgttagaaaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||| || | | ||||||||||||||||||||| | |||| | ||||||||||||||| |
|
|
| T |
44903245 |
tccttggactgtggaatcagctgcaaaactaagcattcctaggctttattattacagctcaagctacttctccaattgtgcatgttattttgttagaaag |
44903344 |
T |
|
| Q |
120 |
tataaaccccattataatttagtttctgatacacagaaatttacaattccttgtttacctcatacagttgagatgacccgtctgcaacttagtgactggg |
219 |
Q |
| |
|
|||| ||| ||| || |||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||| ||||||||| ||| | || |||| |
|
|
| T |
44903345 |
tatagacctcatgatcatttagtttctgatacacagaagtttactattccttgtttgcctcataccattgagatgagccgtctgcagcttcgcgattggg |
44903444 |
T |
|
| Q |
220 |
aaagggaaaccaatgttatgacggccatttttgaaccaaattatgtatcagcggaaagaagctatgggtcactatacaacagttttcatgaacttgaaag |
319 |
Q |
| |
|
||| || |||| | || ||| ||||||||||| || || ||| | || |||||| |||||| || ||| ||| |||||||||||||||||||| |
|
|
| T |
44903445 |
tgaggactacaaatgctgccacagcctattttgaaccaatttttgaatcggaggcaagaagttatgggacaatatgcaatagttttcatgaacttgaaag |
44903544 |
T |
|
| Q |
320 |
tgattatgagaatcttagtaaaactacaatcggaatcaaatcatggagtgtcggaccagtttcagcttgggctaacaagg |
399 |
Q |
| |
|
|||||||||||| |||||||||||||||| || || || || |||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
44903545 |
tgattatgagaaagttagtaaaactacaatggggattaagtcttggagtgtaggaccagtttcaacttgggctaacaagg |
44903624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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