View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13864_high_52 (Length: 266)
Name: NF13864_high_52
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_high_52 |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 38402629 - 38402372
Alignment:
| Q |
1 |
actgttcctcacacactaagccttcccgatcaggttacatacagcatttatacttccaaagtgcaaaatcattctgatactattggtatttaaatagtac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38402629 |
actgttcctcacacactaagccttcccgatcaggttacatacagcatttatacttccaaagtgcaaaatcattctgatactattggtatttaaatagtac |
38402530 |
T |
|
| Q |
101 |
tataaataaacaaaaaatcttaaactttgacaggtcaagcttgcagaatcacttgaactagaaggtgtggatattattcaaactgagggaggaaaatgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38402529 |
tataaataaacaaaaaatcttaaactttgacaggtcaagcttgcagaatcacttgaactagaaggtgtggatattattcaaactgagggaggaaaatgtt |
38402430 |
T |
|
| Q |
201 |
ccaatcctacaaagtctggtgttcttggtttgattgagaaggtaaacatgatgatgtc |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
38402429 |
ccaatcctacaaagtctggtgttcttggtttgattgagaaggtaaacatgaagatgtc |
38402372 |
T |
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