View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13864_high_54 (Length: 252)
Name: NF13864_high_54
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_high_54 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 39852659 - 39852873
Alignment:
| Q |
18 |
gtttgttgatacatttgcatagttaactttgttgaatcttaccacaactgggtacctagtattagggtcctacagaatacaataaaaggaaattaatata |
117 |
Q |
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| T |
39852659 |
gtttgttgatacatttgcatagttaactttgttgaatcttaccacaactgggtacctagtattagggtcctacacaatacaataaaaggaaattaatat- |
39852757 |
T |
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| Q |
118 |
tatagtgaaacttacaaagagatctcatccacatgacatgattgattttgaagtaggagagaaactaacctgatcaacagcaacaactgaaccaatacca |
217 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39852758 |
---agtgaaacttacaaagtgatctcatccacatgacatgattgattttgaagtaggagagaaactaacctgatcaacagcaacaactgaaccaatacca |
39852854 |
T |
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| Q |
218 |
ttgaaccagtaggattctt |
236 |
Q |
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||||||||||||||||||| |
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| T |
39852855 |
ttgaaccagtaggattctt |
39852873 |
T |
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