View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13864_low_16 (Length: 502)
Name: NF13864_low_16
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 463; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 7 - 485
Target Start/End: Complemental strand, 8457392 - 8456914
Alignment:
| Q |
7 |
tcgaataatatgaaaatatatttgaatgtatcatatatgttaccagtccaccagtagatgatgttacagcacgttcatcccacggtaatggaattccatc |
106 |
Q |
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| T |
8457392 |
tcgaataaaatgaaaatatatttggatgtatcatatatgttaccagtccaccagtagatgatgttacagcacgttcatcccacggtaatggaattccatc |
8457293 |
T |
|
| Q |
107 |
aaaacgattatacatccctccatgtccttgggtggtaccaacacgatgattgataactatatcagccattgctctgactttctgttgcttcaacttttga |
206 |
Q |
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| T |
8457292 |
aaaacgattatacatccctccatgtccttgggtggtaccaacacgatgattgataactatatcagccattgctctgactttctgttgcttcaacttttga |
8457193 |
T |
|
| Q |
207 |
agtaaagcttttaattgatgctcagaaccatatttactattaagagagtaaaggttctgaggagtgtaacctgcaaaacagaggaaagacaataaattat |
306 |
Q |
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| T |
8457192 |
agtaaagcttttaattgatgctcagaaccatatttactattaagagagtaaaggttctgaggagtgtaacctgcaaaacagaggaaagacaataaattat |
8457093 |
T |
|
| Q |
307 |
tgcactttaagaccctagaatcgtatgcctaatacttcaaaggcagttgattttaccttcaggcgagaaggaatgagttggcggtggcaaccatgctgaa |
406 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8457092 |
tgcacttcaagaccctagaatcgtatgcctaatacttcaaaggcagttgatttaaccttcaggcgagaaggaatgagttggcggtggcaaccatgctgaa |
8456993 |
T |
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| Q |
407 |
gtgattccagctttagctatgtccggaactttgctttctaaatttgcccaccaatcgtatttgtgagactcccagttaa |
485 |
Q |
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| T |
8456992 |
gtgattccagctttagctatgtccggaactttgctttctaaatttgcccaccaatcgtatttgtgagactcccagttaa |
8456914 |
T |
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