View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13864_low_29 (Length: 409)
Name: NF13864_low_29
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_low_29 |
 | |
|
| [»] chr5 (3 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 324; Significance: 0; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 5 - 404
Target Start/End: Complemental strand, 4575047 - 4574648
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4575047 |
atgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaa |
4574948 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574947 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
4574848 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574847 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
4574748 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| ||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| |||| |||||||| |||||| ||||||| ||||| |
|
|
| T |
4574747 |
tcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaacca |
4574648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 5 - 404
Target Start/End: Complemental strand, 4561243 - 4560846
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4561243 |
atgaacttgagagtgatgttatgaatgctttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaa |
4561144 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4561143 |
tcacttgacatctttagactgtaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaatttt |
4561044 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |
|
|
| T |
4561043 |
ggcagcatcactgttaagtctcaagagaagc-cttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttg |
4560945 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| ||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| |||| |||||||| |||||| ||||||| ||||| |
|
|
| T |
4560944 |
tcattggtggctcggtggttttctcatctga-tttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaacca |
4560846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 5 - 389
Target Start/End: Original strand, 4266559 - 4266943
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4266559 |
atgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaa |
4266658 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| |||||||| | || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4266659 |
tcacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
4266758 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|| |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| |
|
|
| T |
4266759 |
ggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttg |
4266858 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaaga |
389 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||| | || ||||||||||||||||| ||||| |||| |||||||| ||||| |
|
|
| T |
4266859 |
tcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtgtccacaaga |
4266943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 3172480 - 3172076
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||| | || ||||||||||||||||||||||| || ||||| ||| ||| ||||||||| ||||| |
|
|
| T |
3172480 |
atgaacttgagagtgatgttatgaatactcttagttctatattcccttctctatacacaattggtccgttcgcttcgtttttaagtcaaagtccgcaaaa |
3172381 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |
|
|
| T |
3172380 |
tcacttggcatctttagattctaatctttggaaagaagatactaaatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgtaaatttt |
3172281 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||||||| |||||||||| |||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
3172280 |
ggcagcatcatagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttg |
3172181 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||| || ||||| |
|
|
| T |
3172180 |
tcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaacca |
3172081 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
3172080 |
tcctt |
3172076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 4481432 - 4481028
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||| | || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| | |
|
|
| T |
4481432 |
atgaacttgagagtgatgttatgaattctctctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaata |
4481333 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4481332 |
tcacttggaaacattagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaatttt |
4481233 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
||||||||||| ||||||||| |||||| ||| ||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||| || |||||| |
|
|
| T |
4481232 |
ggcagcatcacaattatgtctcaagagaaactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttg |
4481133 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| |||||||| || |||||||| |||| | |||| ||||||||| ||||||||||||| |||| |||||||| |||||| |||| || ||||| |
|
|
| T |
4481132 |
tcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgtccacaagagaaagttttgaacca |
4481033 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
4481032 |
ccctt |
4481028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 390
Target Start/End: Original strand, 4489748 - 4490133
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||| ||| |||||| | |||| | || |||||| ||||||||||||| ||||| |||||||| || |||||| |||| |||| |
|
|
| T |
4489748 |
atgaacttgagagtgatgctatcaatgctcttagttctatattcccttctgtatacacaattggcccattttcttcttttttagatcaaattccagaaaa |
4489847 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4489848 |
tcacttgaaatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaatttt |
4489947 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4489948 |
ggcagcatcactgttatgtctcgagagaagctattagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttg |
4490047 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagag |
390 |
Q |
| |
|
| ||||| |||||| || |||||||| || ||| |||| ||||||||||||||||| ||||| |||| |||||||| |||||| |
|
|
| T |
4490048 |
ttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtccacaagag |
4490133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 5 - 389
Target Start/End: Complemental strand, 4458334 - 4457949
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4458334 |
atgaacttgagagtgatgttatgaatactctctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaaa |
4458235 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| |||||||| | || ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4458234 |
tcacttggcatctttaaattccaatctttggaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaatttt |
4458135 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaa-aaaaccctttttgtggatcattaggcctgatctt |
303 |
Q |
| |
|
|| |||||||| |||||||||| |||||||||| |||| |||||||||| ||||||||||||||| |||||| ||||||||||| | ||||||||||||| |
|
|
| T |
4458134 |
ggaagcatcacagttatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatctt |
4458035 |
T |
|
| Q |
304 |
gtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaaga |
389 |
Q |
| |
|
|||||||| ||||| |||||||||||||| || ||||||||||||| ||| ||||||||| |||| |||| |||||||| ||||| |
|
|
| T |
4458034 |
gtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaaga |
4457949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 4461862 - 4461458
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
||||||| || |||||| ||||||||| |||||| | | || |||||||||||||| ||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
4461862 |
atgaactcgaaagtgatattatgaatgaactctattttatattcccttctctatacaccattggtccactttcttcttttataaatcaaagtccacaaaa |
4461763 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| || || |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
4461762 |
tcacctggcatctttaaattccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttt |
4461663 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
||||||||||| |||||| ||| || | || |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
4461662 |
ggcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttg |
4461563 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| | ||||| |
|
|
| T |
4461562 |
tcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagtactgaacca |
4461463 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
4461462 |
ccctt |
4461458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 409
Target Start/End: Original strand, 4514514 - 4514918
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||| |||||||||||||||||||||||| | |||||| || | |||||||||||||| ||||| ||||| ||||| ||| | ||||||||||||||||| |
|
|
| T |
4514514 |
atgatcttgagagtgatgttatgaatgctctttattctatgctcccttctctatacaccattggcccatttgcttcgtttttgaatcaaagtccacaaaa |
4514613 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||| |
|
|
| T |
4514614 |
tcacttggaatctttaggttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaatttt |
4514713 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|| |||||||| ||||||||| ||||| | ||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
4514714 |
ggtagcatcacgattatgtctccggagaaattgttagagtttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttg |
4514813 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| |||||||| |||||||| || |||||||||||||||||| |||||||||||||||| |||| |||||||| |||||| |||| || ||||| |
|
|
| T |
4514814 |
tcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaacca |
4514913 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
4514914 |
ccctt |
4514918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 4470542 - 4470138
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||| | || |||||||||||| | ||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
4470542 |
atgaacttgaaagtgatgttatgaatgaactctattctatattcccttctctatacgccattggtccactttcttcttttttaaatcaaagtccacaaaa |
4470443 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| | | |||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4470442 |
tcatctagcatctttaaatttcaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttc |
4470343 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||| |||| |||||||||| |||||| || |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
4470342 |
ggcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttg |
4470243 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||||||||| || ||||| ||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
4470242 |
tcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaacca |
4470143 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
4470142 |
ccctt |
4470138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 49 - 362
Target Start/End: Original strand, 4503834 - 4504147
Alignment:
| Q |
49 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
148 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4503834 |
ccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
4503933 |
T |
|
| Q |
149 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
248 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| || | |||||||||| |
|
|
| T |
4503934 |
aatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgc |
4504033 |
T |
|
| Q |
249 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaa |
348 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| || |||||||| || |||||||||||| |
|
|
| T |
4504034 |
ttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaa |
4504133 |
T |
|
| Q |
349 |
atttcagatagagg |
362 |
Q |
| |
|
| ||| ||||||| |
|
|
| T |
4504134 |
acttctaatagagg |
4504147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 5 - 401
Target Start/End: Complemental strand, 4506596 - 4506200
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||||| ||||| |||||||| | || | ||||||||||||||||||| ||||| || ||| |||| ||| ||||||||||||||||||| |
|
|
| T |
4506596 |
atgaacttgagagtaatgttctgaatgctcttgatattatgtttccttctctatacactattggccctttaacttcatttgtaaatcaaagtccacaaaa |
4506497 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| | || || ||||||| || |||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||| |
|
|
| T |
4506496 |
tcagtttgcaactttagattcaaatctttggaaagaggatactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaatttt |
4506397 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|| |||||||| ||||||||| ||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4506396 |
ggaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttg |
4506297 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaa |
401 |
Q |
| |
|
| ||||| |||||||| |||||||| |||||||||| |||||||||||||||||| |||| || |||| ||||||| | |||||| |||| ||||| |
|
|
| T |
4506296 |
taattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaagctggtgttcacaagagaaagtgttaaa |
4506200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 64 - 409
Target Start/End: Original strand, 4613170 - 4613515
Alignment:
| Q |
64 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
163 |
Q |
| |
|
|||||||| ||| |||| || ||| |||||||||||||||| ||||| || |||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4613170 |
attggtcctttatcttcacttttaagtcaaagtccacaaaatcacttggcaagtttaagtaccaatctttggaaagaagataccaagtgtcttgattggc |
4613269 |
T |
|
| Q |
164 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
263 |
Q |
| |
|
||||||| || ||||| | || ||||||||||| |||||||| ||||| || |||||| || ||| || || |||||||||||||||||||||| || |
|
|
| T |
4613270 |
ttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaa |
4613369 |
T |
|
| Q |
264 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggc |
363 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613370 |
tagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggc |
4613469 |
T |
|
| Q |
364 |
ctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4613470 |
ctaatcgcgagctggtgtcctcaagagcaagtattaaaccaccctt |
4613515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 64 - 409
Target Start/End: Complemental strand, 4598851 - 4598506
Alignment:
| Q |
64 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
163 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||| |||||| | ||| ||||||||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4598851 |
attggccctttatcttcgtttttaaatcaaagtcaacaaaagcatttggcatctttaggtaccaatctttggaaagaagataccaagtgtcttgactggc |
4598752 |
T |
|
| Q |
164 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
263 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| |||||||| ||||| || || ||| || ||| ||| | |||| |||||||||||||||||||| |
|
|
| T |
4598751 |
ttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaa |
4598652 |
T |
|
| Q |
264 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggc |
363 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4598651 |
tagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
4598552 |
T |
|
| Q |
364 |
ctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|| | |||| |||||||| |||||||||||||||||||| |||| |
|
|
| T |
4598551 |
ttagttgcaagctggtgtctgcaagagcaagtattaaaccatcctt |
4598506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 409
Target Start/End: Original strand, 4299210 - 4299618
Alignment:
| Q |
1 |
tatgatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccac |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| ||||| |
|
|
| T |
4299210 |
tatgatgaacttgagagtgatgtaatgaatgctctctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccac |
4299309 |
T |
|
| Q |
101 |
aaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaa |
200 |
Q |
| |
|
| ||| ||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| || || || |||| ||||||||||| || |
|
|
| T |
4299310 |
ataatcacttggaatctttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaa |
4299409 |
T |
|
| Q |
201 |
ttttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgat |
300 |
Q |
| |
|
|||||||||| | || |||||| ||| |||| | || ||||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||| || |
|
|
| T |
4299410 |
ttttggcagcgttacagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagac |
4299509 |
T |
|
| Q |
301 |
cttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaa |
400 |
Q |
| |
|
|||||||||||||||| || |||||||||| ||||||| ||||||||||||| |||||||||||| ||||| || |||||| ||||| |||||| | | |
|
|
| T |
4299510 |
cttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgtccacaagaacaagtactga |
4299609 |
T |
|
| Q |
401 |
accaacctt |
409 |
Q |
| |
|
|||| |||| |
|
|
| T |
4299610 |
accaccctt |
4299618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 4 - 409
Target Start/End: Complemental strand, 4626691 - 4626286
Alignment:
| Q |
4 |
gatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa |
103 |
Q |
| |
|
|||||||||||| ||||||| |||||||| |||||||| ||| | |||| |||| || ||||| || || |||| || | |||| ||||||||||| |
|
|
| T |
4626691 |
gatgaacttgagggtgatgtaatgaatgcgctctattctacgttcctttctgtatataccattggacctttgcattctcttttgaatcgaagtccacaaa |
4626592 |
T |
|
| Q |
104 |
atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
203 |
Q |
| |
|
| | |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| || ||||||| |||||||||||||| || || |
|
|
| T |
4626591 |
accagttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctgttgtttatgtgaactt |
4626492 |
T |
|
| Q |
204 |
tggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatctt |
303 |
Q |
| |
|
||||||| | | |||||| ||| | |||| || |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4626491 |
tggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgatctt |
4626392 |
T |
|
| Q |
304 |
gtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacc |
403 |
Q |
| |
|
|| ||||| |||||| || ||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| | |||| |
|
|
| T |
4626391 |
gtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagtactgaacc |
4626292 |
T |
|
| Q |
404 |
aacctt |
409 |
Q |
| |
|
| |||| |
|
|
| T |
4626291 |
atcctt |
4626286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 4259543 - 4259938
Alignment:
| Q |
1 |
tatgatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccac |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||| | ||||| || ||| |||| || ||||||||| ||||| |
|
|
| T |
4259543 |
tatgatgaacttgagagtgatgtaatgaatgtgctctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccac |
4259642 |
T |
|
| Q |
101 |
aaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaa |
200 |
Q |
| |
|
| ||| || || |||| |||| || |||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||| || || |
|
|
| T |
4259643 |
ataatcacctggcatcgttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaa |
4259742 |
T |
|
| Q |
201 |
ttttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgat |
300 |
Q |
| |
|
|||||||||||| || |||||| ||| ||| | | |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4259743 |
ttttggcagcattacagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgac |
4259842 |
T |
|
| Q |
301 |
cttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagta |
396 |
Q |
| |
|
|| | ||||| ||||| || |||||||||| ||||||| || ||||||||| ||||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
4259843 |
ctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagta |
4259938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 88 - 409
Target Start/End: Complemental strand, 4516977 - 4516656
Alignment:
| Q |
88 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
187 |
Q |
| |
|
||||||||||| |||||| ||||| | ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | |||| |
|
|
| T |
4516977 |
aatcaaagtccgcaaaataacttggcttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctg |
4516878 |
T |
|
| Q |
188 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggat |
287 |
Q |
| |
|
| |||||||| |||||||| |||||||| || ||| ||| ||| | || ||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
4516877 |
tagtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggat |
4516778 |
T |
|
| Q |
288 |
cattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaa |
387 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||| |||||||||| || ||||||||||||| ||| ||||||||| |||| |||| ||||||||| ||| |
|
|
| T |
4516777 |
tattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaa |
4516678 |
T |
|
| Q |
388 |
gagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||| |||| || ||||| |||| |
|
|
| T |
4516677 |
gagaaagtgttgaaccatcctt |
4516656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 64 - 409
Target Start/End: Complemental strand, 4580112 - 4579767
Alignment:
| Q |
64 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
163 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4580112 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
4580013 |
T |
|
| Q |
164 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
263 |
Q |
| |
|
||||||| || ||||| || |||||||||||||| |||||||| ||| | || |||||| || ||| || || |||||||||| |||||||| || || |
|
|
| T |
4580012 |
ttgaatccaaggaacctaggtctgttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaa |
4579913 |
T |
|
| Q |
264 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggc |
363 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4579912 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggc |
4579813 |
T |
|
| Q |
364 |
ctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||||| | | ||||||||| |||||||||||| | ||||| |||| |
|
|
| T |
4579812 |
ctaataacgagctggtgtccgcaagagcaagtactgaaccaccctt |
4579767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 4592973 - 4592566
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa- |
103 |
Q |
| |
|
||||||||||||||||||| || |||||| ||| ||| ||||||||||||| ||| | ||||| || ||| |||| || |||| |||| |||||||| |
|
|
| T |
4592973 |
atgaacttgagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
4592874 |
T |
|
| Q |
104 |
--atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaat |
201 |
Q |
| |
|
|| | ||| ||||| | || || | ||||||||||||||| | |||||| ||||||||||||| || ||| | | || ||||||||||| ||| |
|
|
| T |
4592873 |
ccatcaattggattcttttggttccaacatatggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaat |
4592774 |
T |
|
| Q |
202 |
tttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatc |
301 |
Q |
| |
|
|| |||||| | || |||||| | |||||| | ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4592773 |
ttcggcagccttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatc |
4592674 |
T |
|
| Q |
302 |
ttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaa |
401 |
Q |
| |
|
|||||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
4592673 |
ttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaa |
4592574 |
T |
|
| Q |
402 |
ccaacctt |
409 |
Q |
| |
|
||| |||| |
|
|
| T |
4592573 |
ccaccctt |
4592566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 4564453 - 4564046
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa- |
103 |
Q |
| |
|
|||||||| |||||||||| || |||||| ||| ||| ||||||||||||| ||| | ||||| || ||| |||| || |||| |||| |||||||| |
|
|
| T |
4564453 |
atgaactttagagtgatgtaataaatgctctctcctctatgtttccttctctttaccccattggccctttaccttcattattaaaccaaactccacaaat |
4564354 |
T |
|
| Q |
104 |
--atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaat |
201 |
Q |
| |
|
|| | ||| ||||||| || || |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| ||| |
|
|
| T |
4564353 |
tcatcaattggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaat |
4564254 |
T |
|
| Q |
202 |
tttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatc |
301 |
Q |
| |
|
||||| ||||| || |||||| | | | | | || | || ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| | |
|
|
| T |
4564253 |
tttggaagcattacagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgacc |
4564154 |
T |
|
| Q |
302 |
ttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaa |
401 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| || ||| ||||||| || |
|
|
| T |
4564153 |
ttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagtattgaa |
4564054 |
T |
|
| Q |
402 |
ccaacctt |
409 |
Q |
| |
|
||| |||| |
|
|
| T |
4564053 |
ccaccctt |
4564046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 127 - 409
Target Start/End: Complemental strand, 4557742 - 4557460
Alignment:
| Q |
127 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
226 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| | |
|
|
| T |
4557742 |
aatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatgacagttatgacgg |
4557643 |
T |
|
| Q |
227 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgtttt |
326 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
4557642 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgtttt |
4557543 |
T |
|
| Q |
327 |
gtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||| |
|
|
| T |
4557542 |
gtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtattaaaccatcctt |
4557460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 127 - 368
Target Start/End: Complemental strand, 4571589 - 4571348
Alignment:
| Q |
127 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
226 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||||||| |||||||| |||| || |||||| || |
|
|
| T |
4571589 |
aatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaggacagttatgactt |
4571490 |
T |
|
| Q |
227 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgtttt |
326 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
4571489 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtggctcagttgtttt |
4571390 |
T |
|
| Q |
327 |
gtcatcagagtttgtgaatgaaatttcagatagaggcctaat |
368 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571389 |
gtcatcggagtttgtgaatgaaatttcagatagaggcctaat |
4571348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 5 - 396
Target Start/End: Complemental strand, 4622879 - 4622490
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||||||||||| ||||| |||||||| ||||||| |||| || ||| | || || |||| || ||| |||| || ||||||||| |||||| || |
|
|
| T |
4622879 |
atgaacttgagactgatgcgatgaatgcgctctattcaatgttcccatctttgtataccgttggacctttaccttcattattaaatcaaactccacataa |
4622780 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| ||||| ||| || ||||||||||||||||||| || |||||||| ||||||||||| || ||||| || || ||||||| || |||||| |
|
|
| T |
4622779 |
tcacttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaaggaacct-ga-ctcttgtttacgtgaatttt |
4622682 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|||||||| || || ||| ||||||| | || |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
4622681 |
ggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgaccttg |
4622582 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagta |
396 |
Q |
| |
|
|||| |||||||| || |||||||||| ||||||| |||||||||||||| |||||||||||||||| |||||||| |||||| ||||| |
|
|
| T |
4622581 |
tcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagta |
4622490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 86 - 409
Target Start/End: Complemental strand, 4586294 - 4585971
Alignment:
| Q |
86 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
185 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||| || |||||||| |||||||||||||| ||||| || || |
|
|
| T |
4586294 |
taaatcaaagtccacaaaaccacttagcatctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtc |
4586195 |
T |
|
| Q |
186 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
285 |
Q |
| |
|
||||||||||| |||||||| |||| || |||||| || ||| || || ||||||||||||||||||||||||| ||||| ||| ||||| ||| |
|
|
| T |
4586194 |
cgttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatgg |
4586095 |
T |
|
| Q |
286 |
atcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctc |
385 |
Q |
| |
|
|||||||| ||||||||||||||||| || || | ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||| || | |
|
|
| T |
4586094 |
atcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgc |
4585995 |
T |
|
| Q |
386 |
aagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||||||||||||| ||||| |||| |
|
|
| T |
4585994 |
aagagcaagtattgaaccaccctt |
4585971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 133 - 409
Target Start/End: Complemental strand, 4602400 - 4602124
Alignment:
| Q |
133 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagaga |
232 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| || || || |||| ||||||||||| |||||||||||||| || |||||| | | | |
|
|
| T |
4602400 |
tggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattacagttatgacaccccatc |
4602301 |
T |
|
| Q |
233 |
agctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatc |
332 |
Q |
| |
|
| | |||| || ||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
4602300 |
aattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatc |
4602201 |
T |
|
| Q |
333 |
agagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||| |||||||| |||||| |||| || ||||| |||| |
|
|
| T |
4602200 |
tgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccaccctt |
4602124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 86 - 339
Target Start/End: Original strand, 4256098 - 4256351
Alignment:
| Q |
86 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
185 |
Q |
| |
|
||||||||| |||||| | | ||||| |||| |||| || |||||||||||||||||||| || |||||||||||||||||||| || ||||| || |
|
|
| T |
4256098 |
taaatcaaactccacatagtcacttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtc |
4256197 |
T |
|
| Q |
186 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
285 |
Q |
| |
|
||||||||| || |||||||||||||| || |||||| ||| ||| | || |||||||||||||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
4256198 |
tgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgt |
4256297 |
T |
|
| Q |
286 |
atcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagttt |
339 |
Q |
| |
|
|||||||||||||| || |||||||| ||||| || |||||||||| |||||| |
|
|
| T |
4256298 |
atcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt |
4256351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 239 - 409
Target Start/End: Complemental strand, 4568561 - 4568391
Alignment:
| Q |
239 |
tagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtt |
338 |
Q |
| |
|
||||||| |||| ||||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| |
|
|
| T |
4568561 |
tagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtt |
4568462 |
T |
|
| Q |
339 |
tgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||||| || ||| |||||||||| ||| |||| ||||||||| ||||||||||| || ||||| |||| |
|
|
| T |
4568461 |
tgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaagagcaagtgttgaaccaccctt |
4568391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 389
Target Start/End: Complemental strand, 4617651 - 4617377
Alignment:
| Q |
115 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
214 |
Q |
| |
|
|||||||| || || ||||||||||||||||| | |||||||| ||||||||||| || || || |||| ||||||||||| ||||| |||||||| | |
|
|
| T |
4617651 |
tctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcatta |
4617552 |
T |
|
| Q |
215 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcgg |
314 |
Q |
| |
|
| |||||| | | ||| | | | || |||||||||||||||||||| |||| ||| | |||||||||||||| |||||||||||||||||||| || |
|
|
| T |
4617551 |
cagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtgg |
4617452 |
T |
|
| Q |
315 |
ctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaaga |
389 |
Q |
| |
|
|||||| |||| ||||| |||||| ||||||||| |||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
4617451 |
ctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttggtgtccacaaga |
4617377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 4391794 - 4391924
Alignment:
| Q |
283 |
tggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagagg----cctaatcgcaaactgg |
378 |
Q |
| |
|
||||||||||||| ||| |||||||||||| | ||| |||||||| || |||| || ||||||||||||||||||||| ||| |||||| ||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatgg |
4391893 |
T |
|
| Q |
379 |
tgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||||| ||||||||||||| ||||| |||| |
|
|
| T |
4391894 |
tgtccgaaagagcaagtattgaaccaccctt |
4391924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 4835531 - 4835571
Alignment:
| Q |
128 |
atctttggaaagaagatactaaatgtcttgaatggcttgaa |
168 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4835531 |
atctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 4568700 - 4568628
Alignment:
| Q |
88 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaat |
160 |
Q |
| |
|
||||||| ||| ||||| ||||| | ||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4568700 |
aatcaaaatccccaaaagcacttggcttctttaggttccaatctttggaaagaagatatgaaatgtcttgaat |
4568628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 409
Target Start/End: Complemental strand, 24103738 - 24103334
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
24103738 |
atgaacttgagagtgatgttatgaatgctctctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaa |
24103639 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| |||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24103638 |
tcacttggcatctttaaattccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaatttt |
24103539 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
|| |||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||| |
|
|
| T |
24103538 |
ggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttg |
24103439 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacca |
404 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||| | || ||| ||||||||||||| ||||| |||| |||||||| ||||| |||| |||||||| |
|
|
| T |
24103438 |
tcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaacca |
24103339 |
T |
|
| Q |
405 |
acctt |
409 |
Q |
| |
|
|||| |
|
|
| T |
24103338 |
ccctt |
24103334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 266 - 409
Target Start/End: Original strand, 27999753 - 27999896
Alignment:
| Q |
266 |
gcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
365 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
27999753 |
gcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcct |
27999852 |
T |
|
| Q |
366 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||| |||| |||||||| |||||| |||| || ||||| |||| |
|
|
| T |
27999853 |
aatatcaaattggtgtccacaagagaaagttttgaaccaccctt |
27999896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 24107118 - 24107007
Alignment:
| Q |
1 |
tatgatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccac |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||| | |||||||| |||| |||| | |||| || ||||| || ||| |||| || ||||||||| || || |
|
|
| T |
24107118 |
tatgatgaacttgagagtgatgtaatgaatacgctctattctatgttcccttttttatatactattggacctttaccttcattattaaatcaaattcaac |
24107019 |
T |
|
| Q |
101 |
aaaatgacttga |
112 |
Q |
| |
|
| ||| |||||| |
|
|
| T |
24107018 |
ataatcacttga |
24107007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 5 - 390
Target Start/End: Original strand, 20863236 - 20863621
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
|||| |||||||||||||||||||||| | |||||||| |||| |||||||||||||| ||||| || || | ||||||| |||||||||||||||| || |
|
|
| T |
20863236 |
atgagcttgagagtgatgttatgaatgttctctattctatgttcccttctctatacaccattggcccttttgtttcttttttaaatcaaagtccacagaa |
20863335 |
T |
|
| Q |
105 |
tgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaatttt |
204 |
Q |
| |
|
| ||||| | |||||||| || | ||||||||||||||| ||| ||||||||| |||||||||||| |||||||| ||||| |||| |||||||||||| |
|
|
| T |
20863336 |
tcacttggcgtctttagattcaagtctttggaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaatttt |
20863435 |
T |
|
| Q |
205 |
ggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttg |
304 |
Q |
| |
|
||||| | ||| || |||||| ||| || | |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
20863436 |
ggcagtaccacagtcatgtctgtagaaaaattgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttg |
20863535 |
T |
|
| Q |
305 |
tcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagag |
390 |
Q |
| |
|
||||||| ||||| || |||| ||||| | |||||||||||||||||||||||||||||||||||| | |||||||| |||||| |
|
|
| T |
20863536 |
tcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaagag |
20863621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 130 - 409
Target Start/End: Complemental strand, 1674840 - 1674561
Alignment:
| Q |
130 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
229 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| || ||||| | ||||||| ||| || |
|
|
| T |
1674840 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcattattgttatgactccag |
1674741 |
T |
|
| Q |
230 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtc |
329 |
Q |
| |
|
| | || | ||||||||||||||||||||| | |||| ||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
1674740 |
atcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtc |
1674641 |
T |
|
| Q |
330 |
atcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
||| |||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||| |||| || ||||| |||| |
|
|
| T |
1674640 |
atctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagtgttgaaccaccctt |
1674561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 127 - 409
Target Start/End: Original strand, 16685782 - 16686064
Alignment:
| Q |
127 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
226 |
Q |
| |
|
|||||||||||| ||||||| || |||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| || |
|
|
| T |
16685782 |
aatctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactg |
16685881 |
T |
|
| Q |
227 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgtttt |
326 |
Q |
| |
|
||| || || |||||||||||||||||||| |||| ||||| ||| ||| |||||||||||| |||||||||||||| |||| || || ||||| |
|
|
| T |
16685882 |
cagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatttgcggttccgtggtttt |
16685981 |
T |
|
| Q |
327 |
gtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||| |||||| ||||||||| ||||||||| |||||||||| | |||||| || |||||||||||||||||||| |||| |
|
|
| T |
16685982 |
gtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagtattaaaccatcctt |
16686064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 178; Significance: 7e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 1 - 398
Target Start/End: Complemental strand, 3087163 - 3086766
Alignment:
| Q |
1 |
tatgatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccac |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||| | |||||| |||| ||||| |||| || ||||| |||||| |||| | |||||||||| | ||| |
|
|
| T |
3087163 |
tatgatgaacttgagagtgatgtaatgaatgcgctatattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcac |
3087064 |
T |
|
| Q |
101 |
aaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaa |
200 |
Q |
| |
|
| ||| ||||| ||||||||| || |||||||||||||||||||| || ||||||||||||||||||||||| | || |||||||||||||| | |
|
|
| T |
3087063 |
ataatcacttggcatctttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgag |
3086964 |
T |
|
| Q |
201 |
ttttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgat |
300 |
Q |
| |
|
|||||||||||| || |||||| ||| |||| | || ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
3086963 |
ttttggcagcattacagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgat |
3086864 |
T |
|
| Q |
301 |
cttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtatt |
398 |
Q |
| |
|
||||||||||||||||| || || ||||||| ||||||| ||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |
|
|
| T |
3086863 |
cttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagtatt |
3086766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 5 - 396
Target Start/End: Original strand, 3111 - 3503
Alignment:
| Q |
5 |
atgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaa |
104 |
Q |
| |
|
||||||||||||||||||| ||||||| || | ||| |||| || || |||||| || || |||||| |||| || ||| ||||| |||||| || |
|
|
| T |
3111 |
atgaacttgagagtgatgtactgaatgcgctccactctatgttcccatcattatacagtatcggaccattaccttcattattaagtcaaactccacataa |
3210 |
T |
|
| Q |
105 |
tgacttgacatcttt-agactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
203 |
Q |
| |
|
| ||||| |||||| || || |||||||||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |
|
|
| T |
3211 |
tcacttggaatcttttaggttccaatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaattt |
3310 |
T |
|
| Q |
204 |
tggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatctt |
303 |
Q |
| |
|
|||||||| || |||||| ||| | | | || |||| |||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
3311 |
cggcagcattacagttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatctt |
3410 |
T |
|
| Q |
304 |
gtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagta |
396 |
Q |
| |
|
|||||||||||||| || ||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |
|
|
| T |
3411 |
gtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagta |
3503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 409
Target Start/End: Original strand, 4081 - 4483
Alignment:
| Q |
4 |
gatgaacttgagagtgatgttatgaatgctttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaa |
103 |
Q |
| |
|
|||||||||||||| | ||| |||||||| |||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| | |
|
|
| T |
4081 |
gatgaacttgagagcggtgtattgaatgctctctattctatgttcccttctttatataccattggacctttaacttcattattaaatcaaactccacata |
4180 |
T |
|
| Q |
104 |
atgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
203 |
Q |
| |
|
|| ||| |||||||| || |||||||||||||||||||| || |||||||| ||||||| ||| || ||||| || ||||||||||| ||||| |
|
|
| T |
4181 |
atcacta---atctttaggttccaatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaattt |
4277 |
T |
|
| Q |
204 |
tggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatctt |
303 |
Q |
| |
|
||| ||||| || |||||| ||| ||| | || ||||||||||||||| |||| |||| | || ||| ||||||||||||||||||||||||| ||| |
|
|
| T |
4278 |
tggaagcattacagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgacctt |
4377 |
T |
|
| Q |
304 |
gtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaacc |
403 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| || | ||||||||| |||||||||||| | |||| |
|
|
| T |
4378 |
gtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaacc |
4477 |
T |
|
| Q |
404 |
aacctt |
409 |
Q |
| |
|
| |||| |
|
|
| T |
4478 |
accctt |
4483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 115 - 409
Target Start/End: Complemental strand, 1281743 - 1281449
Alignment:
| Q |
115 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
214 |
Q |
| |
|
|||||||| || || |||||||||||||||| | |||||| ||||||||||||| || ||||| ||||||||||||||||| ||||| || ||||| | |
|
|
| T |
1281743 |
tctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagcatta |
1281644 |
T |
|
| Q |
215 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcgg |
314 |
Q |
| |
|
| |||||| ||| |||| | || || |||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1281643 |
cagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcgg |
1281544 |
T |
|
| Q |
315 |
ctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccaacctt |
409 |
Q |
| |
|
|||||| |||||||||| || |||| ||||||||||||||||||||||||||| |||| |||||||| |||||| |||| || ||||| |||| |
|
|
| T |
1281543 |
ctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccaccctt |
1281449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 3162 - 3261
Alignment:
| Q |
265 |
agcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcc |
364 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||| |||||||| |||||||||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc |
3261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 77 - 4
Alignment:
| Q |
130 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
203 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| |
|
|
| T |
77 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaattt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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