View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13864_low_37 (Length: 377)
Name: NF13864_low_37
Description: NF13864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13864_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 30147211 - 30146853
Alignment:
| Q |
1 |
ccctgatttgacttctttgtaaatgtatttctgaaggtcctgatggcaagaagcctttattcttgaccatatctgaataaaattatgtatggatttaatt |
100 |
Q |
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| T |
30147211 |
ccctgatttgacttctttgtaaatgtatttctgaaggtcctgatggcaagaagcctttattcttgaccatatctgaataaaattatgtatggatttaatt |
30147112 |
T |
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| Q |
101 |
taattatataaacagtttgaaagtacgtgtggagaagaaatatcattcatcatttgatgatgagtacatatatttatattggaaaacagtaccctctcct |
200 |
Q |
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| T |
30147111 |
taattatataaacagtttgaaagcatgtgtggagaagaaatatcattcatcatttgatgatgagtacatatatttatattggaaaacagtaccctctcct |
30147012 |
T |
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| Q |
201 |
aaaaaatggcatataagacaaactttgtctattaaactggcaacccaatctagccgcagtgaagtcggctagggtttccaacactatattcatatatatt |
300 |
Q |
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| T |
30147011 |
aaaaaatggcatataagacaaactttgtctattaaactggcaacccaatctagccgcagtgaagtcggctagggtttccaacactatattcatatatatt |
30146912 |
T |
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| Q |
301 |
ttgtttgacttgaatcataagaaagagaactacatgagaaatccttcgcaattcttgtt |
359 |
Q |
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| T |
30146911 |
ttgtttgacttgaatcataagaaagagaactacatgagaaatcattcgcaattcttgtt |
30146853 |
T |
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