View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13866_high_13 (Length: 372)
Name: NF13866_high_13
Description: NF13866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13866_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 4 - 355
Target Start/End: Original strand, 173103 - 173454
Alignment:
| Q |
4 |
aatacatggcgattgattgattgtataaaagttcaatggtttattaaattaacacactagtgggttgtttcgttcgagattgtgaggtcatttccatgga |
103 |
Q |
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| T |
173103 |
aatacatggcgattgattgattgtataaaagttcaatggtttattaaattaacacactagtgggttgtttcattcgagattgtgaggtcatttccatgga |
173202 |
T |
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| Q |
104 |
attatagcattaccttgtacatttgctcaattgctttctctttttcatttaatgtataggataattggatattcaaatttaatgcgtacgttcagaggta |
203 |
Q |
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| T |
173203 |
attatagcattaccttgtacatttgctcaattactttctctttttcatttaatgtataggataattggatatttaaattaaatgcgtacgttcagaggta |
173302 |
T |
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| Q |
204 |
ttaggatgtgactttcagtaaatatttatactgaaattcttatgctaatatagtgaaatttttataattggttattcaaattcttatgctaattggttag |
303 |
Q |
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| T |
173303 |
ttaggatgtgactttcagtaaatatttatactgaaattcttttgctaatatagtgaaatttttataattggttattcaaattcttatgctaattggttag |
173402 |
T |
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| Q |
304 |
acaaaccctatgagtaaaacaagacttattgtgattaattaaatctagtgta |
355 |
Q |
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| T |
173403 |
acaaaccctatgagtaaaacaagacttattgtgattaattaaatctagtgta |
173454 |
T |
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